+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Puma concolor (puma)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 112868307 RNMT; mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 112862084 RNGTT; mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 112860313 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 112862229 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 112857494 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 112855968 RAMAC; RNMT-activating mRNA cap methyltransferase subunit K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 112866831 NCBP1; nuclear cap-binding protein subunit 1 isoform X1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 112850315 NCBP2; nuclear cap-binding protein subunit 2 isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
E 112870680 NCBP2L; LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 112857336 NUDT21; cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 112863828 CPSF6; cleavage and polyadenylation specificity factor subunit 6 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 112852047 CPSF7; cleavage and polyadenylation specificity factor subunit 7 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 112865988 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 112865279 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 112859664 CPSF1; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 112855931 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 112864042 CPSF3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 112864479 CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 112859941 CPSF4; cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 112858118 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 112865500 WDR33; pre-mRNA 3' end processing protein WDR33 K15542 PFS2; polyadenylation factor subunit 2
E 112852471 WDR82; WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 112870325 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 112864257 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 112851965 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 112871544 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 112869229 CSTF1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 112851491 CSTF2T; cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 112870701 CSTF2; cleavage stimulation factor subunit 2 K14407 CSTF2; cleavage stimulation factor subunit 2
E 112864997 CSTF3; cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 112850738 SYMPK; LOW QUALITY PROTEIN: symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 112868952 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 112870202 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 112858975 small nuclear ribonucleoprotein Sm D3-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 112857747 SNRPE; small nuclear ribonucleoprotein E isoform X1 K11097 SNRPE; small nuclear ribonucleoprotein E
E 112856124 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 112863656 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 112868943 SNRPG; small nuclear ribonucleoprotein G isoform X1 K11099 SNRPG; small nuclear ribonucleoprotein G
E 112871791 LSM10; U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 112860286 LSM11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 112855931 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 112864042 CPSF3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 112851491 CSTF2T; cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 112870701 CSTF2; cleavage stimulation factor subunit 2 K14407 CSTF2; cleavage stimulation factor subunit 2
E 112850738 SYMPK; LOW QUALITY PROTEIN: symplekin K06100 SYMPK; symplekin
E 112858219 SLBP; histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
E 112860268 LOW QUALITY PROTEIN: oocyte-specific histone RNA stem-loop-binding protein 2-like K18710 SLBP; histone RNA hairpin-binding protein
E 112862472 CASP8AP2; CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 112852414 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 112851302 SUPT5H; transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 112855413 METTL3; N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 112858517 METTL14; N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 112868367 METTL4; methyltransferase-like protein 4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 112854151 METTL16; U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 112862489 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 112859575 VIRMA; protein virilizer homolog K22910 VIRMA; protein virilizer
E 112852962 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 112848417 RBM15; RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 112861038 ZC3H13; zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 112866737 CBLL1; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Hakai K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 112855442 PAPOLA; poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 112868828 PAPOLG; poly(A) polymerase gamma K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 112860021 PAPOLB; poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 112860325 TENT2; poly(A) RNA polymerase GLD2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 112852130 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 112866876 BARD1; BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 112860918 RBM26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
E 112857300 FTO; alpha-ketoglutarate-dependent dioxygenase FTO K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 112871779 TARDBP; TAR DNA-binding protein 43 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 112853003 DHX40; probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 112867344 KIN; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 112872018 METTL8; methyltransferase-like protein 8 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 112853296 METTL22; LOW QUALITY PROTEIN: methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 112862393 TENT5A; terminal nucleotidyltransferase 5A K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 112848451 TENT5B; terminal nucleotidyltransferase 5B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 112848355 TENT5C; terminal nucleotidyltransferase 5C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 112871146 TENT5D; terminal nucleotidyltransferase 5D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 112855850 ZC3H14; LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 112859916 SRRT; serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 112871924 RBM8A; RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 112871833 MAGOH; protein mago nashi homolog isoform X1 K12877 MAGOH; protein mago nashi
E 112867874 MAGOHB; protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi
E 112853421 DDX39B; spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 112864546 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 112858745 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 112854023 CASC3; LOW QUALITY PROTEIN: protein CASC3 K14323 CASC3; protein CASC3
E 112860981 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 112855738 PNN; pinin K13114 PNN; pinin
E 112855142 ACIN1; apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 112871685 SRRM1; LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 112868288 THOC1; LOW QUALITY PROTEIN: THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 112870647 THOC2; THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 112861250 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 112870201 THOC5; THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 112853184 THOC6; THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 112852493 THOC7; THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 112860316 PCID2; PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 112862736 SEM1; 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 112859524 ENY2; transcription and mRNA export factor ENY2 isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 112870876 CETN2; centrin-2 K10840 CETN2; centrin-2
E 112861235 CETN3; centrin-3 K16466 CETN3; centrin-3
E 112849749 MCM3AP; germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 112857817 TPR; nucleoprotein TPR K09291 TPR; nucleoprotein TPR
E 112868961 RAE1; mRNA export factor K14298 RAE1; mRNA export factor
E 112858369 SEC13; LOW QUALITY PROTEIN: protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 112863638 NUP37; nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 112864557 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 112862486 NUP43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 112863522 NUP50; nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 112858351 NUP54; nucleoporin p54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 112850819 NUP62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 112870684 NUP62CL; nucleoporin-62 C-terminal-like protein K14306 NUP62; nuclear pore complex protein Nup62
E 112856965 NUP88; nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 112857495 NUP93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 112865263 NUP98; nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 112863603 NUP107; nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 112851539 NUP133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 112850011 NUP188; nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 112853627 NUP153; nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 112860978 NUP155; nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 112865182 NUP160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 112870334 NUP35; nucleoporin NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 112866674 NUP205; nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 112851724 NUP210L; LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 112858025 NUP210; nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 112849811 NUP214; nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 112859901 POM121C; nuclear envelope pore membrane protein POM 121C K14316 POM121; nuclear pore complex protein Nup121
E 112861164 NUP58; nucleoporin p58/p45 K14307 NUPL1; nucleoporin p58/p45
E 112866907 NUPL2; nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 112872012 NDC1; nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 112868248 SEH1L; nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1
E 112849915 SENP2; sentrin-specific protease 2 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 112867243 AAAS; aladin K14320 AAAS; aladin
E 112861235 CETN3; centrin-3 K16466 CETN3; centrin-3
E 112863617 GLE1; nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1
E 112868776 LOW QUALITY PROTEIN: nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 112870711 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 112870713 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 112870715 LOW QUALITY PROTEIN: nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 112851890 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 112869227 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
E 112871231 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 112854970 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 112855540 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 112871922 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 112852527 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 112872224 ELAVL2; ELAV-like protein 2 isoform X2 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 112848490 ELAVL4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 112861196 FAF2; FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 112871974 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 112856140 VCPKMT; protein-lysine methyltransferase METTL21D isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 112852296 TNPO2; LOW QUALITY PROTEIN: transportin-2 K18727 TNPO2; transportin-2
E 112868878 XPO1; exportin-1 K14290 XPO1; exportin-1
E 112870011 XPO7; exportin-7 isoform X1 K18460 XPO7; exportin-7
E 112860387 RANBP17; ran-binding protein 17 K24115 RANBP17; Ran-binding protein 17
E 112863436 RANGAP1; ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 112855354 TAF15; TATA-binding protein-associated factor 2N K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 112871645 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 112858783 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 112860530 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 112849431 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 112856994 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 112848942 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 112849924 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 112863303 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G
E 112865648 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 112867806 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 112859888 EIF4H; eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 112854390 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 112860409 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 112870182 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 112856276 ANGEL1; protein angel homolog 1 K18729 ANGEL; protein angel
E 112857805 ANGEL2; protein angel homolog 2 K18729 ANGEL; protein angel
E 112849700 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 112856996 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 112871125 FMR1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 112856107 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 112860959 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 112860379 GEMIN5; gem-associated protein 5 K13133 GEMIN5; gem associated protein 5
E 112858221 transforming acidic coiled-coil-containing protein 3-like K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 112855168 CPEB1; cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112858298 CPEB2; cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112860323 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112854337 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112871474 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 112859920 GIGYF1; GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 112867447 GIGYF2; GRB10-interacting GYF protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 112869490 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 112869660 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 112870998 polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 112871227 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 112858551 PABPC4L; polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 112859488 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 112859861 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 112860344 PAIP1; polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 112861643 PAIP2; polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 112869369 PAIP2B; polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 112853512 SKIV2L; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 112852077 DEAF1; deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 112870926 MCTS1; malignant T-cell-amplified sequence 1 isoform X1 K07575 MCTS; malignant T-cell-amplified sequence
E 112867276 malignant T-cell-amplified sequence 1 K07575 MCTS; malignant T-cell-amplified sequence
E 112870229 DENR; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 112867762 APOBEC1; LOW QUALITY PROTEIN: C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 112851476 A1CF; APOBEC1 complementation factor K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 112863896 PYM1; partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 112855510 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112862171 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112868559 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112868792 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112855729 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112871194 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112867380 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112855560 MSI2; RNA-binding protein Musashi homolog 2 K14411 MSI; RNA-binding protein Musashi
E 112870250 MSI1; LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi
E 112852782 DAZAP1; DAZ-associated protein 1 K14411 MSI; RNA-binding protein Musashi
E 112861962 HBS1L; HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 112860929 PELO; protein pelota homolog K06965 PELO; protein pelota
E 112855223 polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 112857350 PABPN1L; embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 112857400 ATP-dependent RNA helicase DDX19A-like K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 112857411 DDX19B; ATP-dependent RNA helicase DDX19B isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 112865019 DDX25; ATP-dependent RNA helicase DDX25 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 112852899 XAB2; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 112863549 SARNP; SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein
E 112871790 RCC1; regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation
E 112856264 LARP6; LOW QUALITY PROTEIN: la-related protein 6 K18733 LARP6; la-related protein 6
E 112860652 PURA; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 112860148 PURB; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 112863425 POLDIP3; polymerase delta-interacting protein 3 K22414 POLDIP3; polymerase delta-interacting protein 3
E 112857667 ZC3H11A; zinc finger CCCH domain-containing protein 11A isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 112851107 LENG8; leukocyte receptor cluster member 8 K23802 LENG8; SAC3 family protein LENG8/THP3
E 112855600 PATL2; protein PAT1 homolog 2 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 112860384 ETF1; LOW QUALITY PROTEIN: eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 112871166 GSPT2; eukaryotic peptide chain release factor GTP-binding subunit ERF3B K03267 ERF3; peptide chain release factor subunit 3
E 112853302 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 112852690 UPF1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 112867355 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 112870995 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 112860723 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 112870013 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 112860397 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform isoform X1 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 112850861 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 112866111 PPP2R1B; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 112869818 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 112859077 PPP2R2C; protein phosphatase 2, regulatory subunit B, gamma K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 112860914 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 112849634 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 112855984 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 112850977 PPP2R3B; LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 112871666 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 112855131 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 112862073 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 112856185 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 112857790 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 112852022 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 112853107 SMG1; serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 112851690 SMG5; protein SMG5 K11125 SMG5; protein SMG5
E 112852522 SMG6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 112857911 SMG7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 112854478 SMG8; protein SMG8 K18734 SMG8; protein SMG8
E 112851410 SMG9; protein SMG9 K18735 SMG9; protein SMG9
E 112859920 GIGYF1; GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 112867447 GIGYF2; GRB10-interacting GYF protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 112868536 SECISBP2; selenocysteine insertion sequence-binding protein 2 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 112855077 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 112850762 DHX34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 112863950 GTPBP1; GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 112868551 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
E 112868173 MYO5B; unconventional myosin-Vb K10357 MYO5; myosin V
E 112855579 MYO5A; unconventional myosin-Va K10357 MYO5; myosin V
E 112855580 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 112868572 BICD2; protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 112867821 BICD1; protein bicaudal D homolog 1 K18739 BICD; protein bicaudal D
E 112856318 EXD1; piRNA biogenesis protein EXD1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 112864619 ACTG1; actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 112860092 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 112868435 MBP; myelin basic protein K17269 MBP; myelin basic protein
E 112867379 VIM; vimentin K07606 VIM; vimentin
E 112857206 metallothionein-2 K14739 MT1_2; metallothionein 1/2
E 112859511 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 112857213 TBX6; T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
D Trans-acting binding proteins
E 112869279 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 112849845 FUBP3; far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein
E 112869950 FUBP1; far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein
E 112852868 KHSRP; far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 112862036 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 112869034 EEF1A2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 112865315 elongation factor 1-alpha, oocyte form-like K03231 EEF1A; elongation factor 1-alpha
E 112871749 elongation factor 1-alpha, somatic form-like K03231 EEF1A; elongation factor 1-alpha
E 112852156 EEF1G; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 112866868 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 112867299 AGFG1; arf-GAP domain and FG repeat-containing protein 1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 112869105 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 112859397 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 112866359 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 112852761 PTBP1; polypyrimidine tract-binding protein 1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 112855168 CPEB1; cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112858298 CPEB2; cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112860323 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112854337 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 112849700 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 112856996 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 112871125 FMR1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 112856107 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 112860959 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 112867365 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 112850506 PCBP3; poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 112852508 PCBP4; poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 112865598 CAPRIN1; LOW QUALITY PROTEIN: caprin-1 K18743 CAPRIN1; caprin-1
E 112867321 CAPRIN2; LOW QUALITY PROTEIN: caprin-2 K18744 CAPRIN2; caprin-2
E 112863363 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 112850460 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 112863020 protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 112863036 protein argonaute-3 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 112859712 AGO2; protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 112848393 protein argonaute-1 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 112871645 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 112858783 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 112860530 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 112852690 UPF1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 112871474 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 112864981 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 112855150 MEX3B; LOW QUALITY PROTEIN: RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 112868171 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 112866590 FASTK; fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 112869062 LSM14B; LOW QUALITY PROTEIN: protein LSM14 homolog B K18749 LSM14; protein LSM14
E 112850681 LSM14A; protein LSM14 homolog A K18749 LSM14; protein LSM14
E 112868807 PCBP1; LOW QUALITY PROTEIN: poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 112867365 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 112863363 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 112856102 AJUBA; LIM domain-containing protein ajuba isoform X1 K16682 AJUBA; LIM domain-containing protein
E 112867762 APOBEC1; LOW QUALITY PROTEIN: C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 112863515 DNA dC->dU-editing enzyme APOBEC3-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 112871934 MOV10; putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 112848674 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 112861545 TNPO1; transportin-1 K18752 TNPO1; transportin-1
E 112853107 SMG1; serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 112851690 SMG5; protein SMG5 K11125 SMG5; protein SMG5
E 112852522 SMG6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 112857911 SMG7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 112851068 ZFP36; mRNA decay activator protein ZFP36 K15308 TTP; tristetraprolin
E 112855396 ZFP36L1; mRNA decay activator protein ZFP36L1 K18753 ZFP36L; butyrate response factor
E 112868970 ZFP36L2; mRNA decay activator protein ZFP36L2 K18753 ZFP36L; butyrate response factor
E 112862499 LIN28B; protein lin-28 homolog B K18754 LIN28; protein lin-28
E 112848389 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 112858239 HTT; huntingtin K04533 HD; huntingtin
E 112867305 IPO8; importin-8 K18755 IPO8; importin-8
E 112854501 BICC1; protein bicaudal C homolog 1 K18756 BICC1; protein bicaudal C
E 112855510 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112862171 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112868559 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112868792 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112855729 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112871194 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112867380 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 112852313 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 112871920 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 112858149 LARP1B; la-related protein 1B K18757 LARP1; la-related protein 1
E 112861111 LARP1; LOW QUALITY PROTEIN: la-related protein 1 K18757 LARP1; la-related protein 1
E 112856450 ATXN2L; ataxin-2-like protein K23625 ATXN2_2L; ataxin 2/2L
E 112870122 ATXN2; ataxin-2 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 112860401 DCP2; m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 112852241 DCP1A; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 112867652 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 112858355 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 112853624 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 112858379 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 112866743 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 112858486 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 112855198 KLC1; kinesin light chain 1 K10407 KLC; kinesin light chain
E 112862004 KLC4; kinesin light chain 4 isoform X1 K10407 KLC; kinesin light chain
E 112851001 KLC3; kinesin light chain 3 isoform X1 K10407 KLC; kinesin light chain
E 112852008 KLC2; kinesin light chain 2 isoform X1 K10407 KLC; kinesin light chain
E 112868173 MYO5B; unconventional myosin-Vb K10357 MYO5; myosin V
E 112855579 MYO5A; unconventional myosin-Va K10357 MYO5; myosin V
E 112855580 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 112870317 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 112857710 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 112872268 tubulin alpha-4A chain K07374 TUBA; tubulin alpha
E 112867249 TUBA8; tubulin alpha-8 chain K07374 TUBA; tubulin alpha
E 112867334 TUBAL3; tubulin alpha chain-like 3 K07374 TUBA; tubulin alpha
E 112855168 CPEB1; cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112858298 CPEB2; cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112860323 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112854337 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 112860379 GEMIN5; gem-associated protein 5 K13133 GEMIN5; gem associated protein 5
E 112858221 transforming acidic coiled-coil-containing protein 3-like K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 112863877 TNRC6B; trinucleotide repeat-containing gene 6B protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 112864580 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 112853115 TNRC6A; trinucleotide repeat-containing gene 6A protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 112857441 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 112863261 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 112850911 CNOT3; CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 112867022 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 112858358 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 112861069 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 112869990 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 112861097 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 112850678 uncharacterized protein KIAA0355 homolog K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 112871553 DIS3L2; DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 112863469 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 112860857 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 112850219 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 112863300 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 112863566 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 112857719 BTG2; LOW QUALITY PROTEIN: protein BTG2 K14443 TOB; protein Tob/BTG
E 112852239 TOB1; protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 112865876 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 112870182 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 112852170 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 112855517 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 112857268 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 112850740 NANOS2; nanos homolog 2 K18760 NANOS2; protein nanos 2
E 112852307 NANOS3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 112867355 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 112870995 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 112860723 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
E 112866012 TRIM21; E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 112850092 TRIM71; E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 112852094 POLR2G; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 112864251 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 112861534 ZAR1L; ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 112869173 YTHDF1; YTH domain-containing family protein 1 K20102 YTHDF; YTH domain-containing family protein
E 112871122 YTHDF2; YTH domain-containing family protein 2 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 112859345 YTHDF3; YTH domain-containing family protein 3 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 112869454 TIA1; nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 112854248 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 112869490 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 112869660 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 112870998 polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 112871227 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 112858551 PABPC4L; polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 112859488 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 112859861 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 112869105 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 112859397 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 112849700 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 112856996 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 112871125 FMR1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 112869279 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 112852527 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 112861433 G3BP1; ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 112858741 G3BP2; ras GTPase-activating protein-binding protein 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 112849513 EIF2A; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 112859983 EIF3B; eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 112849431 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 112856994 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 112864546 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 112867806 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 112848942 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 112849924 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 112863303 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G
E 112865648 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 112849257 RPS6KA2; LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 112870736 RPS6KA6; ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 112871593 RPS6KA3; ribosomal protein S6 kinase alpha-3 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 112871992 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 112860986 RACK1; receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 112860577 TRAF2; TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 112868776 LOW QUALITY PROTEIN: nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 112870711 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 112870713 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 112870715 LOW QUALITY PROTEIN: nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 112851890 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 112870931 HDAC6; histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 112861115 TDRD3; tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
E 112867313 LARP4B; la-related protein 4B K18763 LARP4; la-related protein 4
E 112867771 LARP4; la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 112852241 DCP1A; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 112867652 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 112860401 DCP2; m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 112864981 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 112855517 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 112857268 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 112852170 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 112858355 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 112853624 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 112858379 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 112866743 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 112858486 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
D 5' exonucleases
E 112850460 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 112869600 XRN2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 112849619 NUDT16; U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 112865455 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 112864590 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 112854581 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 112848687 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 112848528 EXOSC3; exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 112859532 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 112850700 EXOSC5; exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 112857237 EXOSC6; exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 112852419 EXOSC7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 112861206 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 112858248 EXOSC9; exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 112860902 DIS3; exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 112855546 DIS3L; DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 112848904 EXOSC10; exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 112868816 C1D; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 112857399 MPHOSPH6; M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 112858881 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 112857308 TENT4B; LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 112860204 TENT4A; non-canonical poly(A) RNA polymerase PAPD7 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 112849327 ZCCHC7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 112861706 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 112853512 SKIV2L; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 112860389 TTC37; tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3
E 112854978 WDR61; WD repeat-containing protein 61 isoform X1 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 112858358 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 112861069 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 112857441 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 112863261 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 112850911 CNOT3; CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 112867022 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 112869990 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 112861097 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 112867007 CNOT9; CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 112850091 CNOT10; CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 112863469 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 112860857 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 112862220 PNLDC1; poly(A)-specific ribonuclease PNLDC1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 112853143 PARN; poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 112849300 DHX36; ATP-dependent RNA helicase DHX36 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 112850219 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 112863300 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 112863566 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 112857719 BTG2; LOW QUALITY PROTEIN: protein BTG2 K14443 TOB; protein Tob/BTG
E 112852239 TOB1; protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 112865876 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 112861409 CSF2; granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 112858609 NOCT; nocturnin K18764 NOCT; nocturnin [EC:3.1.3.108]
E 112869899 ERI1; 3'-5' exoribonuclease 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 112853219 ERI2; ERI1 exoribonuclease 2 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 112865455 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 112852970 PDE12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 112855102 IREB2; iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 112864590 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 112869032 HELZ2; helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 112855857 NRDE2; protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 112855973 SAMD4A; protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 112851095 SAMD4B; protein Smaug homolog 2 K27396 SMG; protein Smaug
E 112857295 FOCAD; LOW QUALITY PROTEIN: focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 112855116 RNASE4; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 112855183 ribonuclease K6-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 112856425 ribonuclease 7-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 112856474 RNASE11; probable ribonuclease 11 K16633 RNASE11; ribonuclease 11 [EC:3.1.27.-]
E 112862598 ZC3H12D; probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 112863130 ZC3H12A; endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 112871153 ZC3H12B; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 112865884 ZC3H12C; probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 112860441 DROSHA; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 112865128 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 112857152 ENO3; beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 112871814 ENO1; alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 112867901 ENO2; gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 112868988 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 112868005 PFKP; ATP-dependent 6-phosphofructokinase, platelet type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 112849426 PFKL; ATP-dependent 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 112867258 PFKM; ATP-dependent 6-phosphofructokinase, muscle type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 112861286 HSPA9; stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 112855977 LOW QUALITY PROTEIN: uncharacterized protein LOC112855977 K04043 dnaK; molecular chaperone DnaK
E 112859624 LOW QUALITY PROTEIN: 60 kDa heat shock protein, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 112861296 HSPD1; LOW QUALITY PROTEIN: 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 112848687 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 112854581 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 112859532 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 112852419 EXOSC7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024