+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Propithecus coquereli (Coquerel's sifaka)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 105805357 RNGTT; mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 105826517 CDK7; cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 105812231 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 105807986 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 105820119 FAM103A1; RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 105805368 NCBP1; nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 105807859 NCBP2; nuclear cap-binding protein subunit 2 isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 105820866 NUDT21; cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 105808412 CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 105825057 CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 105810062 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 105808243 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 105813409 CPSF1; cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 105820280 CPSF2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 105806731 CPSF3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 105805993 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 105824694 CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 105807663 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 105814839 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 105805568 WDR82; WD repeat-containing protein 82 isoform X1 K14962 WDR82; COMPASS component SWD2
E 105816940 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 105825623 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 105827364 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 105820946 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 105811603 CSTF1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 105814948 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 105822726 CSTF2T; cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 105814599 cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 105817683 SYMPK; symplekin isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 105827607 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 105823737 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 105807885 small nuclear ribonucleoprotein E-like isoform X1 K11097 SNRPE; small nuclear ribonucleoprotein E
E 105811846 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 105811856 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 105815178 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 105826059 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 105826122 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 105812097 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 105808577 LSM10; U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 105815243 LSM11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 105820280 CPSF2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 105806731 CPSF3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 105814948 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 105822726 CSTF2T; cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 105817683 SYMPK; symplekin isoform X1 K06100 SYMPK; symplekin
E 105825791 SLBP; histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
E 105805321 CASP8AP2; CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 105813686 SUPT4H1; transcription elongation factor SPT4 isoform X1 K15171 SUPT4H1; transcription elongation factor SPT4
E 105820538 SUPT5H; transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 105814380 METTL3; N6-adenosine-methyltransferase 70 kDa subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 105816596 METTL4; methyltransferase-like protein 4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 105817373 METTL16; methyltransferase-like protein 16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 105812397 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 105809781 KIAA1429; protein virilizer homolog isoform X1 K22910 VIRMA; protein virilizer
E 105805046 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 105825542 RBM15; putative RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 105813563 ZC3H13; zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 105815222 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 105806076 PAPOLB; poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 105806109 PAPOLG; poly(A) polymerase gamma K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 105814958 PAPOLA; poly(A) polymerase alpha K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 105826494 PAPD4; poly(A) RNA polymerase GLD2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 105826970 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 105816137 BARD1; BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 105804981 RBM26; RNA-binding protein 26 K13192 RBM26; RNA-binding protein 26
E 105817051 FTO; alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 105826958 ALKBH5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 105824944 TARDBP; TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 105813638 DHX40; probable ATP-dependent RNA helicase DHX40 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 105808519 KIN; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 105817292 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 105815513 METTL8; methyltransferase-like protein 8 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 105812975 METTL22; methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 105811676 FAM46B; protein FAM46B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 105811798 FAM46A; protein FAM46A isoform X1 K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 105825725 FAM46C; protein FAM46C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 105826145 FAM46D; protein FAM46D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 105807110 ZC3H14; zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 105806027 SRRT; serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 105809608 RBM8A; RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
E 105806349 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 105823958 MAGOHB; protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi
E 105825788 protein mago nashi homolog 2-like K12877 MAGOH; protein mago nashi
E 105820023 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 105817909 DDX39B; spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 105825319 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 105821693 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 105824278 CASC3; protein CASC3 K14323 CASC3; protein CASC3
E 105808158 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 105821509 PNN; pinin K13114 PNN; pinin
E 105814431 ACIN1; apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 105813070 RNPS1; RNA-binding protein with serine-rich domain 1 isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 105815697 SRRM1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 105816634 THOC1; THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 105826831 THOC2; THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 105822504 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 105820023 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 105810163 THOC5; THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 105813152 THOC6; THO complex subunit 6 homolog isoform X1 K13175 THOC6; THO complex subunit 6
E 105812119 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
E 105821857 CHTOP; chromatin target of PRMT1 protein isoform X1 K28424 CHTOP; chromatin target of PRMT1 protein
D TREX-2 complex
E 105825131 PCID2; PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 105811161 ENY2; transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 105814841 LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 105822890 CETN2; centrin-2 K10840 CETN2; centrin-2
E 105810752 CETN3; centrin-3 K16466 CETN3; centrin-3
E 105817077 MCM3AP; germinal-center associated nuclear protein isoform X1 K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 105813192 TPR; nucleoprotein TPR K09291 TPR; nucleoprotein TPR
E 105811605 RAE1; mRNA export factor K14298 RAE1; mRNA export factor
E 105812691 SEC13; protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 105815133 NUP37; nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 105824748 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 105819325 NUP43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 105822743 NUP50; nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 105815733 NUP54; nucleoporin p54 K14308 NUP54; nuclear pore complex protein Nup54
E 105809413 NUP62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 105810572 NUP62CL; nucleoporin-62 C-terminal-like protein K14306 NUP62; nuclear pore complex protein Nup62
E 105822869 NUP88; nuclear pore complex protein Nup88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 105820871 NUP93; nuclear pore complex protein Nup93 K14309 NUP93; nuclear pore complex protein Nup93
E 105811386 NUP98; nuclear pore complex protein Nup98-Nup96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 105808375 NUP107; LOW QUALITY PROTEIN: nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 105823186 NUP133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 105806517 NUP188; nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 105809441 NUP153; nuclear pore complex protein Nup153 K14296 NUP153; nuclear pore complex protein Nup153
E 105814476 NUP155; nuclear pore complex protein Nup155 K14312 NUP155; nuclear pore complex protein Nup155
E 105811028 NUP160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 105815899 NUP35; nucleoporin NUP53 isoform X1 K14313 NUP35; nuclear pore complex protein Nup53
E 105808995 NUP205; LOW QUALITY PROTEIN: nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 105818993 NUP210; LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 105821732 NUP210L; nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 105806645 NUP214; nuclear pore complex protein Nup214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 105805658 POM121L2; LOW QUALITY PROTEIN: POM121-like protein 2 K14316 POM121; nuclear pore complex protein Nup121
E 105807058 nuclear envelope pore membrane protein POM 121C-like K14316 POM121; nuclear pore complex protein Nup121
E 105814797 NUPL1; nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 105822426 nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 105806264 NDC1; nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1
E 105814851 SEH1L; nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1
E 105826310 RANBP2; E3 SUMO-protein ligase RanBP2 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 105808279 SENP2; sentrin-specific protease 2 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 105815165 AAAS; aladin K14320 AAAS; aladin
E 105810752 CETN3; centrin-3 K16466 CETN3; centrin-3
E 105806575 GLE1; nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1
E 105810484 NXF3; nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 105811256 nuclear RNA export factor 5-like K14284 NXF; nuclear RNA export factor
E 105814898 NXF5; nuclear RNA export factor 5 K14284 NXF; nuclear RNA export factor
E 105827319 NXF1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 105810688 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
E 105817437 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
E 105822392 NPAP1; LOW QUALITY PROTEIN: nuclear pore-associated protein 1 K26564 NPAP1; nuclear pore-associated protein 1
D Ran-mediated transport factors
E 105821033 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 105823285 LOW QUALITY PROTEIN: GTP-binding nuclear protein Ran-like K07936 RAN; GTP-binding nuclear protein Ran
E 105812934 LOW QUALITY PROTEIN: acidic leucine-rich nuclear phosphoprotein 32 family member A-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 105826799 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 105805398 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 105819480 TNFSF13; tumor necrosis factor ligand superfamily member 13 isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 105807929 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 105806284 ELAVL4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 105807835 ELAVL3; ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 105811995 ELAVL2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 105822506 FAF2; FAS-associated factor 2 isoform X1 K18726 FAF2; FAS-associated factor 2
E 105819976 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 105825863 VCPKMT; protein-lysine methyltransferase METTL21D isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 105807917 TNPO2; transportin-2 K18727 TNPO2; transportin-2
E 105806133 XPO1; exportin-1 K14290 XPO1; exportin-1
E 105825268 XPO7; LOW QUALITY PROTEIN: exportin-7 K18460 XPO7; exportin-7
E 105814638 RANBP17; ran-binding protein 17 K24115 RANBP17; Ran-binding protein 17
E 105805254 RANGAP1; ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 105813869 TAF15; TATA-binding protein-associated factor 2N K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 105807639 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 105822359 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 105822497 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 105806754 EIF4A2; eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 105811749 eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 105819404 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 105807525 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 105818239 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 105822301 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 105816611 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 105807041 EIF4H; eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H
E 105815840 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 105822073 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 105824039 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 105821295 EIF4ENIF1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 105805448 ANGEL2; protein angel homolog 2 K18729 ANGEL; protein angel
E 105819932 ANGEL1; protein angel homolog 1 K18729 ANGEL; protein angel
E 105806232 FXR1; fragile X mental retardation syndrome-related protein 1 K15516 FMR; fragile X mental retardation protein
E 105819399 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 105827244 FMR1; fragile X mental retardation protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 105813329 CYFIP1; LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 105815246 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 105817483 GEMIN5; gem-associated protein 5 K13133 GEMIN5; gem associated protein 5
E 105825793 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 105805500 CPEB2; cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105808871 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105814663 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105822698 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105809059 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 105806016 GIGYF1; PERQ amino acid-rich with GYF domain-containing protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 105822345 GIGYF2; PERQ amino acid-rich with GYF domain-containing protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 105807101 PABPC4L; LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 105809764 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 105812327 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 105812568 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 105818028 polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 105821251 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 105826161 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 105826713 PAIP1; polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 105812022 PAIP2; polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 105812043 PAIP2B; polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 105817866 SKIV2L; helicase SKI2W isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 105816568 DEAF1; deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 105804921 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 105825172 MCTS1; malignant T-cell-amplified sequence 1 K07575 MCTS; malignant T-cell-amplified sequence
E 105825680 DENR; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 105805011 APOBEC1; C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 105822730 A1CF; APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 105817286 WIBG; partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 105805541 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105811135 HNRNPA3; LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105816879 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105825355 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105811293 DAZAP1; DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 105813644 RNA-binding protein Musashi homolog 2 K14411 MSI; RNA-binding protein Musashi
E 105815071 MSI1; RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 105827195 HBS1L; HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 105819126 PELO; protein pelota homolog K06965 PELO; protein pelota
E 105812169 LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 105814427 PABPN1; polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 105821058 PABPN1L; embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 105826147 LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 105808003 DDX19A; ATP-dependent RNA helicase DDX19A K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 105808006 ATP-dependent RNA helicase DDX19B K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 105826131 DDX25; ATP-dependent RNA helicase DDX25 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 105807925 XAB2; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 105811714 RCC1; regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation
E 105807248 LARP6; la-related protein 6 isoform X1 K18733 LARP6; la-related protein 6
E 105812027 PURA; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 105812500 PURB; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 105805241 POLDIP3; polymerase delta-interacting protein 3 K22414 POLDIP3; polymerase delta-interacting protein 3
E 105819618 ZC3H11A; zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 105809566 LENG8; leukocyte receptor cluster member 8 isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
E 105814246 PATL2; LOW QUALITY PROTEIN: protein PAT1 homolog 2 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 105812023 ETF1; eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 105813126 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 105827108 GSPT2; eukaryotic peptide chain release factor GTP-binding subunit ERF3B K03267 ERF3; peptide chain release factor subunit 3
E 105818136 UPF1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 105808536 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 105824404 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
E 105826270 UPF3B; regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 105813802 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 105816012 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 105809563 PPP2R1A; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 105822194 PPP2R1B; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 105821415 PPP2R2D; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 105821578 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 105825276 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 105827094 PPP2R2C; protein phosphatase 2, regulatory subunit B, gamma isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 105821244 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 105823611 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 105825709 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 105805455 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 105807462 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 105812602 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 105819900 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 105827459 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 105812991 SMG1; serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 105821804 SMG5; protein SMG5 K11125 SMG5; protein SMG5
E 105817368 SMG6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 105806793 SMG7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 105813666 SMG8; protein SMG8 isoform X1 K18734 SMG8; protein SMG8
E 105817714 SMG9; protein SMG9 K18735 SMG9; protein SMG9
E 105806016 GIGYF1; PERQ amino acid-rich with GYF domain-containing protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 105822345 GIGYF2; PERQ amino acid-rich with GYF domain-containing protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 105814251 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 105817777 SECISBP2; selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 105817713 DHX34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 105805278 GTPBP1; GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 105817252 pumilio domain-containing protein KIAA0020 homolog K14844 PUF6; pumilio homology domain family member 6
E 105812790 MYO5B; unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 105821328 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 105821383 MYO5A; unconventional myosin-Va K10357 MYO5; myosin V
E 105807566 BICD1; protein bicaudal D homolog 1 isoform X1 K18739 BICD; protein bicaudal D
E 105816426 BICD2; protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 105814320 EXD1; exonuclease 3'-5' domain-containing protein 1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 105805953 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 105819999 ACTG1; actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 105814009 MBP; myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 105823669 VIM; vimentin K07606 VIM; vimentin
E 105820862 metallothionein-I, hippocampal K14739 MT1_2; metallothionein 1/2
E 105820863 metallothionein-2A K14739 MT1_2; metallothionein 1/2
E 105820864 metallothionein-2 K14739 MT1_2; metallothionein 1/2
E 105820865 metallothionein-1E K14739 MT1_2; metallothionein 1/2
E 105811323 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 105818134 GDF1; embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 105823107 TBX6; T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 105808698 NANOS1; nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 105820078 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 105806649 FUBP3; far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 105811967 KHSRP; far upstream element-binding protein 2 isoform X1 K13210 FUBP; far upstream element-binding protein
E 105823855 FUBP1; far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein
E 105805851 elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 105811757 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 105818518 EEF1A2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 105826961 EEF1G; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 105807347 heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 105821791 HAX1; HCLS1-associated protein X-1 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 105818625 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 105825352 STAU2; double-stranded RNA-binding protein Staufen homolog 2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 105822431 insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 105811268 PTBP1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 105805500 CPEB2; cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105808871 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105814663 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105822698 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 105806232 FXR1; fragile X mental retardation syndrome-related protein 1 K15516 FMR; fragile X mental retardation protein
E 105819399 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 105827244 FMR1; fragile X mental retardation protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 105813329 CYFIP1; LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 105815246 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 105817446 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 105817072 PCBP3; poly(rC)-binding protein 3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 105819871 PCBP4; poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 105814586 CAPRIN1; caprin-1 K18743 CAPRIN1; caprin-1
E 105807588 CAPRIN2; caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 105812262 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 105819339 nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 105812893 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 105808637 AGO1; protein argonaute-1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 105808642 AGO4; protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 105808646 AGO3; protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 105813441 AGO2; protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 105807639 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 105822359 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 105822497 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 105818136 UPF1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 105809059 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 105819249 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 105811282 MEX3D; RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 105816391 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 105820110 MEX3B; RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 105821835 MEX3A; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 105824603 FASTK; fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 105809193 protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 105816149 LSM14A; protein LSM14 homolog A K18749 LSM14; protein LSM14
E 105818549 LSM14B; protein LSM14 homolog B isoform X1 K18749 LSM14; protein LSM14
E 105812105 PCBP1; poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 105817446 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 105812262 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 105819339 nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 105806060 LIMD1; LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 105814477 AJUBA; LIM domain-containing protein ajuba K16682 AJUBA; LIM domain-containing protein
E 105816151 WTIP; Wilms tumor protein 1-interacting protein K16682 AJUBA; LIM domain-containing protein
E 105805011 APOBEC1; C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 105805183 DNA dC->dU-editing enzyme APOBEC-3A-like isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 105810595 MOV10; putative helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 105815683 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 105826602 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 105812991 SMG1; serine/threonine-protein kinase SMG1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 105821804 SMG5; protein SMG5 K11125 SMG5; protein SMG5
E 105817368 SMG6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 105806793 SMG7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 105820542 ZFP36; tristetraprolin K15308 TTP; tristetraprolin
E 105817985 ZFP36L2; zinc finger protein 36, C3H1 type-like 2 K18753 ZFP36L; butyrate response factor
E 105819861 ZFP36L1; zinc finger protein 36, C3H1 type-like 1 K18753 ZFP36L; butyrate response factor
E 105811675 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 105815916 LIN28B; protein lin-28 homolog B isoform X1 K18754 LIN28; protein lin-28
E 105818911 HTT; huntingtin isoform X1 K04533 HD; huntingtin
E 105807589 IPO8; importin-8 K18755 IPO8; importin-8
E 105820868 BICC1; protein bicaudal C homolog 1 K18756 BICC1; protein bicaudal C
E 105805541 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105811135 HNRNPA3; LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105816879 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105825355 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 105807940 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 105823839 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 105809480 LARP1B; la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1
E 105817484 LARP1; la-related protein 1 K18757 LARP1; la-related protein 1
E 105805979 ATXN2L; ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 105825624 ATXN2; ataxin-2 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 105822536 DCP2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 105807096 DCP1A; mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 105812905 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 105815847 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 105817880 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 105814903 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 105824676 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 105818161 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 105805806 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 105822966 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 105811253 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 105817129 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 105807458 KLC4; kinesin light chain 4 isoform X1 K10407 KLC; kinesin light chain
E 105812612 KLC1; kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 105817696 KLC3; kinesin light chain 3 K10407 KLC; kinesin light chain
E 105827391 KLC2; kinesin light chain 2 K10407 KLC; kinesin light chain
E 105812790 MYO5B; unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 105821328 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 105821383 MYO5A; unconventional myosin-Va K10357 MYO5; myosin V
E 105808789 TUBA4A; tubulin alpha-4A chain isoform X1 K07374 TUBA; tubulin alpha
E 105815384 TUBA1A; tubulin alpha-1A chain isoform X1 K07374 TUBA; tubulin alpha
E 105815399 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 105815409 tubulin alpha-1C chain K07374 TUBA; tubulin alpha
E 105815498 tubulin alpha-1B chain-like K07374 TUBA; tubulin alpha
E 105815811 TUBA8; tubulin alpha-8 chain K07374 TUBA; tubulin alpha
E 105815885 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 105819624 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 105826892 TUBAL3; tubulin alpha chain-like 3 K07374 TUBA; tubulin alpha
E 105805500 CPEB2; cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105808871 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105814663 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105822698 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 105817483 GEMIN5; gem-associated protein 5 K13133 GEMIN5; gem associated protein 5
E 105825793 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 105805238 TNRC6B; trinucleotide repeat-containing gene 6B protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 105810884 TNRC6A; trinucleotide repeat-containing gene 6A protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 105824010 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 105813215 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 105808410 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 105809542 CNOT3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 105809021 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 105815752 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 105823641 CNOT6; CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 105817491 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 105825277 CNOT7; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 105816197 uncharacterized protein KIAA0355 homolog isoform X1 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 105816724 DIS3L2; DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 105817047 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 105808494 PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 105805279 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 105809221 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 105819639 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 105822242 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 105825082 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 105826107 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 105821295 EIF4ENIF1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 105810057 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 105807271 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 105823371 EDC4; enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 105817631 NANOS2; nanos homolog 2 K18760 NANOS2; protein nanos 2
E 105807887 NANOS3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 105808536 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 105824404 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
E 105826270 UPF3B; regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
E 105811411 TRIM21; E3 ubiquitin-protein ligase TRIM21 isoform X1 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 105812433 TRIM71; E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 105827315 POLR2G; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 105818017 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 105808487 ZAR1L; ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 105811703 YTHDF2; YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
E 105813265 YTHDF3; YTH domain-containing family protein 3 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 105818575 YTHDF1; YTH domain-containing family protein 1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 105808701 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 105812053 TIA1; nucleolysin TIA-1 isoform p40 K13201 TIA1; nucleolysin TIA-1/TIAR
E 105807101 PABPC4L; LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 105809764 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 105812327 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 105812568 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 105818028 polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 105821251 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 105826161 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 105818625 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 105825352 STAU2; double-stranded RNA-binding protein Staufen homolog 2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 105806232 FXR1; fragile X mental retardation syndrome-related protein 1 K15516 FMR; fragile X mental retardation protein
E 105819399 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 105827244 FMR1; fragile X mental retardation protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 105820078 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 105807929 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 105821513 ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 105815745 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 105809152 EIF2A; eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 105806030 EIF3B; eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 105806754 EIF4A2; eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 105811749 eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 105819404 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 105825319 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 105816611 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 105807525 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 105818239 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 105822301 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 105808909 RPS6KA6; LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 105811717 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 105816304 RPS6KA3; ribosomal protein S6 kinase alpha-3 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 105822317 RPS6KA2; ribosomal protein S6 kinase alpha-2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 105818588 GNB2L1; guanine nucleotide-binding protein subunit beta-2-like 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 105818690 TRAF2; TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 105810484 NXF3; nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 105811256 nuclear RNA export factor 5-like K14284 NXF; nuclear RNA export factor
E 105814898 NXF5; nuclear RNA export factor 5 K14284 NXF; nuclear RNA export factor
E 105827319 NXF1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 105816839 HDAC6; histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 105815407 TDRD3; tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
E 105818397 LARP4; la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4
E 105826928 LARP4B; la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 105807096 DCP1A; mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 105812905 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 105822536 DCP2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 105819249 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 105807271 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 105823371 EDC4; enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 105810057 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 105815847 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 105817880 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 105814903 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 105824676 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 105818161 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 105805806 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 105822966 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 105811253 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 105817129 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 105812893 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 105820668 XRN2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 105825726 U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
E 105826030 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 105825728 DCPS; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 105820423 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 105818454 EXOSC1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 105806619 EXOSC2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 105820487 EXOSC3; exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 105813421 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 105820561 EXOSC5; exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 105808012 EXOSC6; exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 105826383 EXOSC7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 105810137 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 105815266 EXOSC9; exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 105808506 DIS3; exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 105810785 DIS3L; DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 105824941 EXOSC10; exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 105812064 C1D; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 105813466 MPHOSPH6; M-phase phosphoprotein 6 isoform X1 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 105820510 DDX60; probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 105808849 PAPD5; non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 105816439 PAPD7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 105819544 ZCCHC7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 105819100 SKIV2L2; superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 105817866 SKIV2L; helicase SKI2W isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 105810746 TTC37; LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3
E 105816465 WDR61; WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 105815752 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 105823641 CNOT6; CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 105813215 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 105808410 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 105809542 CNOT3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 105809021 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 105817491 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 105825277 CNOT7; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 105808831 RQCD1; cell differentiation protein RCD1 homolog K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 105812426 CNOT10; CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 105817047 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 105808494 PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 105812393 PNLDC1; poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 105812983 PARN; poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 105809103 DHX36; ATP-dependent RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 105815151 ATP-dependent RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 105805279 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 105809221 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 105819639 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 105822242 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 105825082 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 105826107 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 105821018 CSF2; granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 105818763 CCRN4L; nocturnin K18764 NOCT; nocturnin [EC:3.1.3.108]
E 105814742 ERI1; 3'-5' exoribonuclease 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 105810934 ERI2; ERI1 exoribonuclease 2 isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 105825728 DCPS; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 105826445 PDE12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 105816466 IREB2; iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 105820423 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 105818546 HELZ2; helicase with zinc finger domain 2 isoform X1 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 105807121 NRDE2; protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 105820586 SAMD4B; protein Smaug homolog 2 isoform X1 K27396 SMG; protein Smaug
E 105825897 SAMD4A; protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 105827022 FOCAD; focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 105814183 non-secretory ribonuclease-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 105814296 RNASE1; ribonuclease pancreatic isoform X1 K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 105814515 RNASE4; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 105814315 RNASE6; ribonuclease K6 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 105814365 ribonuclease 8-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 105814366 ribonuclease 7-like K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 105814319 RNASE11; probable ribonuclease 11 K16633 RNASE11; ribonuclease 11 [EC:3.1.27.-]
E 105809567 ZC3H12B; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 105812324 ZC3H12A; ribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 105819312 ZC3H12D; probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 105822229 ZC3H12C; probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 105807217 DROSHA; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 105822260 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 105805039 ENO2; gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 105822859 ENO3; beta-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 105824900 ENO1; alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 105814753 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 105805544 PFKM; ATP-dependent 6-phosphofructokinase, muscle type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 105824150 PFKL; ATP-dependent 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 105826920 PFKP; ATP-dependent 6-phosphofructokinase, platelet type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 105807634 LOW QUALITY PROTEIN: stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 105811996 HSPA9; stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 105808089 HSPD1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 105806619 EXOSC2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 105818454 EXOSC1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 105813421 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 105826383 EXOSC7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 27, 2025