+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Pocillopora damicornis (lace coral)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 113685361 mRNA cap guanine-N7 methyltransferase-like K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 113672717 cyclin-dependent kinase 7-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 113671461 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 113669963 LOW QUALITY PROTEIN: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 113679209 RNA guanine-N7 methyltransferase activating subunit-like K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 113672917 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 113675275 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 113665735 cleavage and polyadenylation specificity factor subunit 5-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 113664788 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 113666996 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 113684755 pre-mRNA cleavage complex 2 protein Pcf11-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 113666960 cleavage and polyadenylation specificity factor subunit 1-like K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 113683673 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 113684147 cleavage and polyadenylation specificity factor subunit 3-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 113684202 cleavage and polyadenylation specificity factor subunit 4-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 113680136 pre-mRNA 3'-end-processing factor FIP1-like K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 113672194 pre-mRNA 3' end processing protein WDR33-like K15542 PFS2; polyadenylation factor subunit 2
E 113668717 WD repeat-containing protein 82-like K14962 WDR82; COMPASS component SWD2
E 113674633 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 113665159 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 113667728 serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 113672208 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 113678649 cleavage stimulation factor subunit 1-like K14406 CSTF1; cleavage stimulation factor subunit 1
E 113671793 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 113673413 cleavage stimulation factor subunit 3-like K14408 CSTF3; cleavage stimulation factor subunit 3
E 113678751 symplekin-like K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 113670502 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 113676751 small nuclear ribonucleoprotein Sm D3-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 113673476 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 113682973 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 113676464 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 113675403 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 113677607 probable GPI-anchored adhesin-like protein PGA55 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 113683673 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 113684147 cleavage and polyadenylation specificity factor subunit 3-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 113671793 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 113678751 symplekin-like K06100 SYMPK; symplekin
E 113669841 histone RNA hairpin-binding protein-like isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
D DRB sensitivity inducing factor (DSIF) complex
E 113683914 transcription elongation factor SPT4-A-like K15171 SUPT4H1; transcription elongation factor SPT4
E 113666016 transcription elongation factor SPT5-like K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 113675223 N6-adenosine-methyltransferase subunit METTL3-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 113664980 N6-adenosine-methyltransferase non-catalytic subunit-like K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 113669523 methyltransferase-like protein 4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 113685660 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase-like K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 113678811 pre-mRNA-splicing regulator WTAP-like isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 113677851 protein virilizer homolog isoform X1 K22910 VIRMA; protein virilizer
E 113684971 RNA-binding protein 15-like K13190 RBM15; RNA-binding protein 15
E 113673939 zinc finger CCCH domain-containing protein 13-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 113665952 uncharacterized protein LOC113665952 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 113664503 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 113670647 poly(A) polymerase type 3-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 113675411 poly(A) RNA polymerase GLD2-A-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 113675412 poly(A) RNA polymerase GLD2-A-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 113675413 poly(A) RNA polymerase GLD2-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 113685634 poly(A) RNA polymerase GLD2-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 113678208 poly(A) RNA polymerase GLD2-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 113666632 speckle targeted PIP5K1A-regulated poly(A) polymerase-like K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 113679658 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 113671248 RNA-binding protein 26-like K13192 RBM26; RNA-binding protein 26
E 113664606 RNA demethylase ALKBH5-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 113682505 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 113674366 probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 113679186 DNA/RNA-binding protein KIN17-like K13102 KIN; DNA/RNA-binding protein KIN17
D 113681157 methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 113665624 terminal nucleotidyltransferase 5C-like K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 113671070 zinc finger CCCH domain-containing protein 14-like K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 113675092 serrate RNA effector molecule homolog B-like isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 113682314 RNA-binding protein 8A-like K12876 RBM8A; RNA-binding protein 8A
E 113668336 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 113671482 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 113671657 spliceosome RNA helicase Ddx39b K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 113672791 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 113676408 coiled-coil domain-containing protein 174-like K25178 CCDC174; coiled-coil domain-containing protein 174
E 113666000 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 113677463 pinin-like K13114 PNN; pinin
E 113667055 apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 113671549 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 113672001 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 113686652 THO complex subunit 1-like K12878 THOC1; THO complex subunit 1
E 113686726 THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 113665638 THO complex subunit 3-like K12880 THOC3; THO complex subunit 3
E 113671482 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 113685014 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 113680443 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 113667019 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 113682015 PCI domain-containing protein 2-like K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 113675956 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 113680627 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 113664548 centrin-3-like K16466 CETN3; centrin-3
D Nuclear pore complex
E 113685881 nucleoprotein TPR-like isoform X1 K09291 TPR; nucleoprotein TPR
E 113681517 mRNA export factor-like K14298 RAE1; mRNA export factor
E 113676951 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 113676393 nucleoporin Nup37-like K14302 NUP37; nuclear pore complex protein Nup37
E 113671163 nuclear pore complex protein Nup85-like K14304 NUP85; nuclear pore complex protein Nup85
E 113668649 nucleoporin Nup43-like K14305 NUP43; nuclear pore complex protein Nup43
E 113673105 nuclear pore complex protein Nup50-like isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 113673590 nucleoporin p54-like K14308 NUP54; nuclear pore complex protein Nup54
E 113672755 nuclear pore glycoprotein p62-like K14306 NUP62; nuclear pore complex protein Nup62
E 113670947 nuclear pore complex protein Nup88-like isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 113675606 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93
E 113681915 nuclear pore complex protein Nup98-Nup96-like isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 113669674 nuclear pore complex protein Nup107-like K14301 NUP107; nuclear pore complex protein Nup107
E 113667209 nuclear pore complex protein Nup133-like K14300 NUP133; nuclear pore complex protein Nup133
E 113680637 nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 113670281 nuclear pore complex protein Nup153-like K14296 NUP153; nuclear pore complex protein Nup153
E 113669482 nuclear pore complex protein Nup155-like K14312 NUP155; nuclear pore complex protein Nup155
E 113679741 nuclear pore complex protein Nup160-like K14303 NUP160; nuclear pore complex protein Nup160
E 113684286 nucleoporin NUP35-like isoform X1 K14313 NUP35; nuclear pore complex protein Nup53
E 113685147 nuclear pore complex protein Nup205-like K14310 NUP205; nuclear pore complex protein Nup205
E 113666403 nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 113681176 nuclear pore complex protein Nup214-like isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 113680468 nuclear envelope pore membrane protein POM 121-like K14316 POM121; nuclear pore complex protein Nup121
E 113678133 nucleoporin p58/p45-like K14307 NUPL1; nucleoporin p58/p45
E 113675168 LOW QUALITY PROTEIN: nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 113682905 nucleoporin NDC1-like K14315 NDC1; nucleoporin NDC1
E 113665834 nucleoporin SEH1-like K14299 SEH1; nucleoporin SEH1
E 113682812 aladin-like K14320 AAAS; aladin
E 113664548 centrin-3-like K16466 CETN3; centrin-3
E 113686916 nucleoporin GLE1-like K18723 GLE1; nucleoporin GLE1
E 113674180 nuclear RNA export factor 1-like isoform X1 K14284 NXF; nuclear RNA export factor
E 113668562 NTF2-related export protein 2-like K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 113681045 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 113677128 ELAV-like protein 3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 113677129 ELAV-like protein 1-B K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 113676395 ELAV-like protein 2 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 113680592 FAS-associated factor 2-like K18726 FAF2; FAS-associated factor 2
E 113664571 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 113678359 protein-lysine methyltransferase METTL21D-like K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 113678597 exportin-1-like K14290 XPO1; exportin-1
E 113671167 exportin-7-like K18460 XPO7; exportin-7
E 113667573 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 113674483 eukaryotic translation initiation factor 4E-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 113685526 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 113674882 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 113668150 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 113673095 eukaryotic translation initiation factor 4 gamma 2-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 113679440 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 113685994 eukaryotic translation initiation factor 4E transporter-like K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 113679843 protein angel homolog 2-like K18729 ANGEL; protein angel
E 113682300 uncharacterized calcium-binding protein At1g02270-like K18729 ANGEL; protein angel
E 113677732 synaptic functional regulator FMR1-like K15516 FMR; fragile X mental retardation protein
E 113681091 cytoplasmic FMR1-interacting protein 2-like K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 113681104 gem-associated protein 5-like K13133 GEMIN5; gem associated protein 5
E 113685069 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 113669699 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 113686267 ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 113680486 GRB10-interacting GYF protein 2-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 113666816 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 113681341 polyadenylate-binding protein-interacting protein 1-like K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 113673341 polyadenylate-binding protein-interacting protein 2B-like K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 113679954 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 113676411 deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 113665050 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 113686781 density-regulated protein homolog K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 113681034 uncharacterized protein LOC113681034 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 113679056 APOBEC1 complementation factor-like isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 113680806 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 113677642 heterogeneous nuclear ribonucleoprotein A1-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 113677644 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 113675886 heterogeneous nuclear ribonucleoprotein A3 homolog 1-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 113686074 RNA-binding protein Musashi homolog 2-like K14411 MSI; RNA-binding protein Musashi
E 113666408 RNA-binding protein Musashi homolog 2-like K14411 MSI; RNA-binding protein Musashi
E 113664352 polyadenylate-binding protein, cytoplasmic and nuclear-like K14411 MSI; RNA-binding protein Musashi
E 113675145 RNA-binding protein Musashi homolog 2-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 113679347 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 113665826 protein pelota homolog K06965 PELO; protein pelota
E 113665845 polyadenylate-binding protein 2-B-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 113676990 pre-mRNA-splicing factor SYF1-like isoform X1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 113675890 SAP domain-containing ribonucleoprotein-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 113667250 regulator of chromosome condensation-like K11493 RCC1; regulator of chromosome condensation
E 113681604 la-related protein 6-like K18733 LARP6; la-related protein 6
E 113680594 transcriptional activator protein Pur-beta-like K21772 PURA; transcriptional activator protein Pur-alpha
E 113685488 uncharacterized protein LOC113685488 K22414 POLDIP3; polymerase delta-interacting protein 3
E 113664780 zinc finger CCCH domain-containing protein 11A-like K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 113678477 leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 113668061 eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 113664642 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 113665619 regulator of nonsense transcripts 2-like isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 113682036 regulator of nonsense transcripts 3B-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 113681459 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 113666488 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 113677053 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 113680344 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 113669872 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 113681500 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 113681501 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 113666066 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 113672642 protein SMG5-like K11125 SMG5; protein SMG5
E 113679467 telomerase-binding protein EST1A-like K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 113668745 protein SMG7-like K14409 SMG7; protein SMG7
E 113669044 protein smg8-like K18734 SMG8; protein SMG8
E 113676582 protein SMG9-like K18735 SMG9; protein SMG9
E 113680486 GRB10-interacting GYF protein 2-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 113668309 selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 113664353 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 113670617 GTP-binding protein 1-like K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 113669514 pumilio homolog 3-like K14844 PUF6; pumilio homology domain family member 6
E 113666472 unconventional myosin-VIIa-like K10357 MYO5; myosin V
E 113680762 unconventional myosin-Vb-like K10357 MYO5; myosin V
E 113680954 protein bicaudal D homolog 2-like K18739 BICD; protein bicaudal D
E 113683243 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 113676161 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 113683755 uncharacterized protein LOC113683755 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 113676316 uncharacterized protein LOC113676316 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 113666244 actin, cytoplasmic-like K05692 ACTB_G1; actin beta/gamma 1
E 113676617 actin, cytoplasmic K05692 ACTB_G1; actin beta/gamma 1
E 113666253 actin-3 K05692 ACTB_G1; actin beta/gamma 1
E 113676714 transcriptional regulator Myc-1-like isoform X1 K04377 MYC; Myc proto-oncogene protein
E 113681741 transcriptional regulator Myc-A-like K04377 MYC; Myc proto-oncogene protein
E 113681742 transcriptional regulator Myc-2-like K04377 MYC; Myc proto-oncogene protein
E 113681758 uncharacterized protein LOC113681758 K04377 MYC; Myc proto-oncogene protein
E 113669098 T-box transcription factor mls-1-like K10180 TBX6; T-box protein 6
E 113679970 nanos homolog 1-like K18741 NANOS1; protein nanos 1
E 113668672 nanos homolog 1-like K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 113670452 far upstream element-binding protein 3-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 113682290 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 113677688 elongation factor 1-gamma-A-like K03233 EEF1G; elongation factor 1-gamma
E 113672910 uncharacterized protein LOC113672910 K16220 HAX1; HCLS1-associated protein X-1
E 113674008 arf-GAP domain and FG repeat-containing protein 1-like isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 113677960 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 113685069 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 113669699 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 113677732 synaptic functional regulator FMR1-like K15516 FMR; fragile X mental retardation protein
E 113681091 cytoplasmic FMR1-interacting protein 2-like K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 113667691 caprin-1-like isoform X1 K18743 CAPRIN1; caprin-1
E 113682547 nuclease-sensitive element-binding protein 1-like isoform X1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 113684377 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 113674483 eukaryotic translation initiation factor 4E-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 113685526 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 113686267 ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 113676173 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 113672909 RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 113680778 protein LSM14 homolog B-like K18749 LSM14; protein LSM14
E 113682547 nuclease-sensitive element-binding protein 1-like isoform X1 K09276 YBX1; Y-box-binding protein 1
E 113679460 Wilms tumor protein 1-interacting protein homolog isoform X1 K16682 AJUBA; LIM domain-containing protein
E 113681034 uncharacterized protein LOC113681034 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 113670717 putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 113664350 putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 113681231 transportin-1-like K18752 TNPO1; transportin-1
E 113666066 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 113672642 protein SMG5-like K11125 SMG5; protein SMG5
E 113679467 telomerase-binding protein EST1A-like K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 113668745 protein SMG7-like K14409 SMG7; protein SMG7
E 113682439 mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 113678918 rho-related protein racA-like K18754 LIN28; protein lin-28
E 113686400 protein lin-28 homolog A-like isoform X1 K18754 LIN28; protein lin-28
E 113680248 huntingtin-like K04533 HD; huntingtin
E 113681873 protein bicaudal C homolog 1-like K18756 BICC1; protein bicaudal C
E 113677642 heterogeneous nuclear ribonucleoprotein A1-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 113677644 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 113675886 heterogeneous nuclear ribonucleoprotein A3 homolog 1-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 113683021 cAMP-dependent protein kinase catalytic subunit alpha-like isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 113673161 la-related protein 1B-like K18757 LARP1; la-related protein 1
D P-body specific factors
E 113667380 m7GpppN-mRNA hydrolase-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 113686633 mRNA-decapping enzyme 1B-like K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 113676327 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 113676996 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 113671937 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 113683736 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 113679117 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 113686653 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 113674959 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 113670924 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 113685024 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 113684055 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 113677510 kinesin light chain-like K10407 KLC; kinesin light chain
E 113666472 unconventional myosin-VIIa-like K10357 MYO5; myosin V
E 113680762 unconventional myosin-Vb-like K10357 MYO5; myosin V
E 113680144 tubulin alpha-1D chain-like K07374 TUBA; tubulin alpha
E 113680146 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 113680147 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 113674807 tubulin alpha-1D chain-like K07374 TUBA; tubulin alpha
E 113670165 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 113679917 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 113671417 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 113671421 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 113672446 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 113685069 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 113669699 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 113681104 gem-associated protein 5-like K13133 GEMIN5; gem associated protein 5
E 113671426 trinucleotide repeat-containing gene 6A protein-like isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 113682719 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 113676435 CCR4-NOT transcription complex subunit 2-like K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 113683639 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 113664998 CCR4-NOT transcription complex subunit 4-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 113674805 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 113669866 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 113671283 uncharacterized protein LOC113671283 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 113666804 DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 113669667 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 113664434 PAN2-PAN3 deadenylation complex subunit Pan3-like K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 113680914 protein BTG2-like K14443 TOB; protein Tob/BTG
E 113671574 protein Tob2-like K14443 TOB; protein Tob/BTG
E 113678113 protein BTG1-like K14443 TOB; protein Tob/BTG
E 113685994 eukaryotic translation initiation factor 4E transporter-like K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 113668841 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 113665958 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 113665619 regulator of nonsense transcripts 2-like isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 113682036 regulator of nonsense transcripts 3B-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 113674241 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 113677536 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 113669709 YTH domain-containing family protein 1-like K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 113682447 nucleolysin TIAR-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 113666816 polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 113677960 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 113677732 synaptic functional regulator FMR1-like K15516 FMR; fragile X mental retardation protein
E 113664423 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 113682019 eukaryotic translation initiation factor 2A-like K15026 EIF2A; translation initiation factor 2A
E 113667706 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 113674882 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 113672791 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 113679440 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 113668150 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 113673095 eukaryotic translation initiation factor 4 gamma 2-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 113678869 ribosomal protein S6 kinase alpha-3-like K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 113665601 receptor of activated protein C kinase 1-like K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 113673552 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 113686733 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 113674180 nuclear RNA export factor 1-like isoform X1 K14284 NXF; nuclear RNA export factor
E 113686454 tudor domain-containing protein 3-like K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 113686633 mRNA-decapping enzyme 1B-like K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 113667380 m7GpppN-mRNA hydrolase-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 113676173 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 113665958 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 113668841 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 113676327 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 113676996 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 113671937 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 113683736 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 113679117 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 113686653 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 113674959 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 113670924 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 113685024 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 113684055 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 113684377 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 113668722 U8 snoRNA-decapping enzyme-like isoform X1 K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 113666852 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
C 3'-5' decay
D Core exosome factors
E 113674078 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
E 113684413 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 113664877 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 113685231 exosome complex component RRP41-like K11600 RRP41; exosome complex component RRP41
E 113672246 exosome complex component RRP46-like K12590 RRP46; exosome complex component RRP46
E 113664204 exosome complex component MTR3-like isoform X1 K12587 MTR3; exosome complex component MTR3
E 113677430 exosome complex component RRP42-like isoform X1 K12589 RRP42; exosome complex component RRP42
E 113667580 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43
E 113686460 exosome complex component RRP45-like K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 113680791 DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 113680679 exosome component 10-like K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 113671293 nuclear nucleic acid-binding protein C1D-like isoform X1 K12592 C1D; exosome complex protein LRP1
E 113673959 M-phase phosphoprotein 6-like K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 113664144 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 113664145 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 113664149 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 113675580 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 113665936 non-canonical poly(A) RNA polymerase protein Trf4-1-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 113664755 zinc finger CCHC domain-containing protein 7-like K12597 AIR1_2; protein AIR1/2
E 113682953 exosome RNA helicase MTR4-like K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 113679954 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 113675702 tetratricopeptide repeat protein 37-like K12600 SKI3; superkiller protein 3
E 113668316 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 113674805 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 113682719 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 113676435 CCR4-NOT transcription complex subunit 2-like K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 113683639 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 113664998 CCR4-NOT transcription complex subunit 4-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 113669866 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 113668973 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 113681791 CCR4-NOT transcription complex subunit 10-like K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 113669667 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 113664434 PAN2-PAN3 deadenylation complex subunit Pan3-like K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 113665536 poly(A)-specific ribonuclease PNLDC1-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 113677331 poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 113680133 ATP-dependent DNA/RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 113680914 protein BTG2-like K14443 TOB; protein Tob/BTG
E 113671574 protein Tob2-like K14443 TOB; protein Tob/BTG
E 113678113 protein BTG1-like K14443 TOB; protein Tob/BTG
E 113680403 nocturnin-like isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 113684654 ERI1 exoribonuclease 2-like K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 113666852 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 113664339 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 113678471 uncharacterized protein LOC113678471 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 113680301 uncharacterized protein LOC113680301 isoform X1 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 113677457 protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 113677454 protein Smaug homolog 1-like isoform X1 K27396 SMG; protein Smaug
E 113686054 focadhesin-like K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 113667925 endoribonuclease ZC3H12A-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 113671175 ribonuclease ZC3H12A-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 113671985 ribonuclease ZC3H12A-like isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 113686142 ribonuclease 3-like K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 113672929 oligoribonuclease, mitochondrial-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 113664229 enolase-like isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 113672365 polyribonucleotide nucleotidyltransferase 1, mitochondrial-like K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 113686166 ATP-dependent 6-phosphofructokinase, muscle type-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 113670029 stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 113684237 heat shock protein 60A-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 113684413 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 113674078 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
D Cofactors
E 113685231 exosome complex component RRP41-like K11600 RRP41; exosome complex component RRP41
E 113677430 exosome complex component RRP42-like isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024