+D GENES KO
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KEGG Orthology (KO) - Clostridioides difficile 630
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pdc00010]
D CDIF630_02705 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CDIF630_03585 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_03394 pfp; diphosphate-fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CDIF630_01340 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CDIF630_00531 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03420 gatY2; D-tagatose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03464 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CDIF630_03466 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CDIF630_01964 gapB; glyceraldehyde-3-phosphate dehydrogenase (GAPDH) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CDIF630_03465 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CDIF630_03463 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CDIF630_03462 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CDIF630_03699 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CDIF630_02652 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CDIF630_00100 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_02936 pfo; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CDIF630_00231 vorB1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02431 vorB2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02671 vorB3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_00232 vorA1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02430 vorA2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02670 vorA3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02396 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_02428 putative acetate--CoA ligase (ADP-forming) K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_00693 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CDIF630_03150 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_00936 bglC; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_00516 bglA1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03362 bglA2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03378 bglA3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03379 ascB1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03399 bglA4; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03409 ascB2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03415 bglH; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03421 bglA5; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_02920 ptsG-A; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03387 PTS system, glucose-like IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02761 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03311 PTS system, arabinose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03341 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02759 PTS system, maltose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_03314 PTS system, arabinose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_01492 PTS system, glucose-like IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_02921 ptsG-BC; PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:pdc00020]
D CDIF630_00952 acnB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CDIF630_00953 icd; isocitrate dehydrogenase (NAD+) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00231 vorB1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02431 vorB2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02671 vorB3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_00232 vorA1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02430 vorA2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02670 vorA3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_00233 vorA'1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit N-terminal region K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CDIF630_02429 vorA'2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit N-terminal region K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CDIF630_02669 vorA'3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit N-terminal region K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CDIF630_00230 vorC1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), gamma subunit (ferredoxin) K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CDIF630_02432 vorC2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), gamma subunit (ferredoxin) K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CDIF630_02672 vorC3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), gamma subunit (ferredoxin) K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CDIF630_02582 cat1; succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CDIF630_01139 fumA; fumarate hydratase class i, subunit A K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CDIF630_01140 fumB; fumarate hydratase class i, subunit B K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CDIF630_00083 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CDIF630_00100 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CDIF630_02936 pfo; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pdc00030]
D CDIF630_03585 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CDIF630_02557 rpe1; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CDIF630_02828 rpe2; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CDIF630_02559 tkt'1; transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_02560 tkt1; transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_03770 tkt'2; transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_03771 tkt2; transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_02567 tal2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CDIF630_02558 rpiB1; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CDIF630_03791 rpiB2; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CDIF630_01667 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CDIF630_00424 rbsK; ribokinase, pfkB family K00852 rbsK; ribokinase [EC:2.7.1.15]
D CDIF630_01372 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03828 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CDIF630_03949 bifunctional 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CDIF630_00693 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CDIF630_03964 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CDIF630_00410 PTS system, mannose-type IIA component K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203]
D CDIF630_00411 PTS system, mannose-type IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D CDIF630_00621 PTS system, ribitol-specific IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D CDIF630_00412 PTS system, mannose-type IIC component K17466 dgaC; D-glucosaminate PTS system EIIC component
D CDIF630_00622 PTS system, ribitol-specific IIC component K17466 dgaC; D-glucosaminate PTS system EIIC component
D CDIF630_00413 PTS system, mannose-type IID component K17467 dgaD; D-glucosaminate PTS system EIID component
D CDIF630_00531 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03420 gatY2; D-tagatose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_01340 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_03394 pfp; diphosphate-fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pdc00040]
D CDIF630_03139 uxaA'; altronate dehydratase, N-terminal region K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D CDIF630_03288 suyA; (2R)-sulfolactate sulfo-lyase subunit alpha K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D CDIF630_03140 uxaA; altronate dehydratase, C-terminal region K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D CDIF630_03287 suyB; (2R)-sulfolactate sulfo-lyase subunit beta K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D CDIF630_03034 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CDIF630_02972 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_03801 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_02513 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CDIF630_00107 putative sugar-phosphate aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CDIF630_02557 rpe1; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CDIF630_02828 rpe2; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CDIF630_03348 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CDIF630_03347 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CDIF630_00619 xpdH2; ribitol-5-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_02561 D-arabitol-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_02562 xpdH1; xylitol-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_02514 putative sugar-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_03285 dapA1; 4-hydroxy-tetrahydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:pdc00051]
D CDIF630_02005 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CDIF630_02738 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CDIF630_03042 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_03394 pfp; diphosphate-fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CDIF630_01340 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CDIF630_02570 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D CDIF630_00886 srlD; sorbitol 6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D CDIF630_02504 fruK; fructose 1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CDIF630_00619 xpdH2; ribitol-5-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_02561 D-arabitol-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_02562 xpdH1; xylitol-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_02514 putative sugar-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CDIF630_03347 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CDIF630_00531 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03420 gatY2; D-tagatose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03464 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CDIF630_02558 rpiB1; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CDIF630_03791 rpiB2; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CDIF630_00328 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02819 PTS system, mannosylglycerate-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02735 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_03300 PTS system, mannose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_03417 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02820 PTS system, mannosylglycerate-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D CDIF630_03299 PTS system, mannose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D CDIF630_02821 PTS system, mannosylglycerate-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_03298 PTS system, mannose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_03419 PTS system, fructose-like IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_02503 fruABC; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_00408 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_00620 PTS system, ribitol-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_01218 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03350 xynA; PTS system, xyloside-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03351 xynB; PTS system, xyloside-specific IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CDIF630_03353 xynC; PTS system, xyloside-specific IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_03577 PTS system, mannose / fructose / sorbose-type IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_00623 PTS system, ribitol-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03352 xynD; PTS system, xyloside-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_02571 mtlF; PTS system, mannitol-specific, EIIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D CDIF630_02573 mtlA; PTS system, mannitol-specific, IICB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CDIF630_00885 srlB; PTS system, sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CDIF630_02656 PTS system, sorbitol-like IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CDIF630_00883 srlEa; PTS system, sorbitol-specific IIB N-terminal component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_00884 srlEb; PTS system, sorbitol-specific IIB C-terminal component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_02659 PTS system, sorbitol-like IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_00882 srlA; PTS system, sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CDIF630_02660 PTS system, sorbitol-like IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:pdc00052]
D CDIF630_01496 galT; UDP-glucose---hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CDIF630_02971 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CDIF630_02972 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_03801 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_02705 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CDIF630_00103 PTS system, galactitol-type IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_02565 PTS system, arabitol / xylitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_02517 PTS system, fructose / mannitol family IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_00104 PTS system, galactitol-type IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_01227 PTS system, galactiol-type IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_02564 PTS system, arabitol / xylitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_02516 PTS system, fructose / mannitol family IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_00105 PTS system, galactitol-type IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_02515 PTS system, fructose / mannitol family IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_02563 PTS system, arabitol / xylitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_03762 lacC; tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_03394 pfp; diphosphate-fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CDIF630_03759 kbaY; D-tagatose-1,6-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D CDIF630_03357 gatY1; D-tagatose-1,6-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D CDIF630_02004 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CDIF630_00596 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CDIF630_03760 agaS; putative tagatose-6-phosphate ketose / aldose isomerase AgaS K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:pdc00053]
D CDIF630_03034 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CDIF630_03953 PTS system, fructose / mannitol-family IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CDIF630_02806 PTS system, fructose / mannitol-family IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CDIF630_03952 PTS system, fructose / mannitol-family IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CDIF630_02804 PTS system, fructose / mannitol family IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CDIF630_02513 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CDIF630_00107 putative sugar-phosphate aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pdc00500]
D CDIF630_00597 PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CDIF630_02004 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CDIF630_00596 oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CDIF630_02972 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_03801 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_00094 exgA; putative beta-glucosidase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58]
D CDIF630_02798 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CDIF630_00252 PTS system, lactose / cellobiose-family IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03971 licA; PTS system, lichenan-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03148 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03363 PTS system, beta-glycoside-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03756 PTS system, lactose / cellobiose-family IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00983 PTS system, maltose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00253 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03972 licB; PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00981 PTS system, maltose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_01777 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03152 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03365 PTS system, beta-glycoside-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03755 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03333 PTS system, peptidoglycan degradation IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00254 PTS system, lactose / cellobiose-family IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03969 licC; PTS system, lichenan-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_00982 PTS system, maltose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03151 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03364 PTS system, beta-glycoside-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03754 PTS system, lactose / cellobiose-family IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03332 PTS system, peptidoglycan degradation IIC membrane component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03150 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_00936 bglC; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_00516 bglA1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03362 bglA2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03378 bglA3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03379 ascB1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03399 bglA4; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03409 ascB2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03415 bglH; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_03421 bglA5; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CDIF630_01002 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CDIF630_01003 glgD; glycogen biosynthesis protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CDIF630_01004 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CDIF630_02778 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CDIF630_01005 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CDIF630_02422 glucan 1,4-alpha-maltohydrolase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CDIF630_01006 amyB; amylopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CDIF630_02420 mapA; maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D CDIF630_02421 pgmB1; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D CDIF630_03413 pgmB2; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D CDIF630_02920 ptsG-A; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03387 PTS system, glucose-like IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02761 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03311 PTS system, arabinose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03341 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02759 PTS system, maltose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_03314 PTS system, arabinose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_01492 PTS system, glucose-like IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_03344 PTS system, maltose-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CDIF630_00984 malH1; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CDIF630_02758 pagL; phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CDIF630_03343 malH3; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CDIF630_03414 treP; alpha,alpha-trehalose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D CDIF630_03374 treA; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_02705 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CDIF630_03585 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CDIF630_02005 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pdc00520]
D CDIF630_02920 ptsG-A; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03387 PTS system, glucose-like IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02761 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03311 PTS system, arabinose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03341 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03372 PTS system, glucose-like IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CDIF630_01146 nagA1; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CDIF630_03764 nagA2; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CDIF630_01147 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CDIF630_02005 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CDIF630_00236 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CDIF630_00234 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CDIF630_03829 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CDIF630_03330 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CDIF630_03335 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CDIF630_00239 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CDIF630_03707 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CDIF630_02474 nanE; N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D CDIF630_02473 nanA; acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D CDIF630_01169 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CDIF630_00095 xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D CDIF630_02759 PTS system, maltose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_03314 PTS system, arabinose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_01492 PTS system, glucose-like IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_02921 ptsG-BC; PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CDIF630_02705 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_02972 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_03801 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_03034 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CDIF630_01496 galT; UDP-glucose---hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CDIF630_02971 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CDIF630_00408 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_00620 PTS system, ribitol-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_01218 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03350 xynA; PTS system, xyloside-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03351 xynB; PTS system, xyloside-specific IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CDIF630_03353 xynC; PTS system, xyloside-specific IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_03577 PTS system, mannose / fructose / sorbose-type IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_00623 PTS system, ribitol-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03352 xynD; PTS system, xyloside-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03585 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CDIF630_02738 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CDIF630_03042 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CDIF630_01002 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CDIF630_01003 glgD; glycogen biosynthesis protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pdc00620]
D CDIF630_02936 pfo; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CDIF630_00231 vorB1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02431 vorB2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02671 vorB3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_00232 vorA1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02430 vorA2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02670 vorA3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_00100 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00877 plfB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CDIF630_02121 eutE; ethanolamine acetaldehyde oxidoreductase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_01323 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CDIF630_02937 phosphate acyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_02124 eutD; ethanolamine phosphate acetyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_03699 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CDIF630_02140 accA; acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CDIF630_02143 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CDIF630_02142 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CDIF630_02141 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_02582 cat1; succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CDIF630_02428 putative acetate--CoA ligase (ADP-forming) K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CDIF630_01321 lactate dehydrogenase (electron bifurcating), catalytic subunit K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CDIF630_01320 etfA4; lactate dehydrogenase (electron bifurcating), electron transfer flavoprotein alpha subunit K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D CDIF630_01319 etfB4; lactate dehydrogenase (electron bifurcating), electron transfer flavoprotein beta subunit K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D CDIF630_02396 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CDIF630_00522 ldhA; (R)-2-hydroxyisocaproate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CDIF630_01281 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CDIF630_03933 uncharacterized protein, glyoxalase-like K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CDIF630_03005 putative hydrolase beta-lactamase-like K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CDIF630_01318 larA; lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1]
D CDIF630_01141 ytsJ; malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CDIF630_00083 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CDIF630_01139 fumA; fumarate hydratase class i, subunit A K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CDIF630_01140 fumB; fumarate hydratase class i, subunit B K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CDIF630_02652 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_01125 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CDIF630_00951 citrate (Re)-synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pdc00630]
D CDIF630_00952 acnB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03927 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CDIF630_02826 putative phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CDIF630_01499 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CDIF630_03101 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_02988 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_01838 gcvTPA; glycine cleavage system, subunit A K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CDIF630_01839 gcvPB; glycine cleavage system, subunit B K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00845 gcvH; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D CDIF630_03078 garR; tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CDIF630_03367 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CDIF630_03949 bifunctional 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:pdc00640]
D CDIF630_02428 putative acetate--CoA ligase (ADP-forming) K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CDIF630_01323 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CDIF630_02937 phosphate acyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_02124 eutD; ethanolamine phosphate acetyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00877 plfB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CDIF630_01194 bcd; butyryl-CoA dehydrogenase, catalytic subunit K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CDIF630_03110 putative zinc-binding dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CDIF630_00922 acrC; acryloyl-CoA hydrogenase, catalytic subunit K20143 acrC; acrylyl-CoA reductase (NADH) [EC:1.3.1.95]
D CDIF630_02140 accA; acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CDIF630_02143 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CDIF630_02142 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CDIF630_02141 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CDIF630_02389 isoleucine 2-epimerase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CDIF630_02396 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CDIF630_01300 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:pdc00650]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_01198 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CDIF630_00919 crt1; short-chain-enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CDIF630_01197 crt2; short-chain-enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CDIF630_01194 bcd; butyryl-CoA dehydrogenase, catalytic subunit K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CDIF630_02931 ctfA; butyrate--acetoacetate CoA-transferase, subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_02932 ctfB; butyrate--acetoacetate CoA-transferase, subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_00228 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CDIF630_02619 indole-3-acetate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CDIF630_02668 isobutyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CDIF630_00227 ptb1; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CDIF630_00831 ptb2; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CDIF630_02121 eutE; ethanolamine acetaldehyde oxidoreductase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_02389 isoleucine 2-epimerase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CDIF630_02582 cat1; succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CDIF630_02581 sucD; succinate-semialdehyde dehydrogenase (acetylating) K18119 sucD; succinate-semialdehyde dehydrogenase [EC:1.2.1.76]
D CDIF630_02577 gbd; NAD-dependent 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D CDIF630_02578 cat2; 4-hydroxybutyryl-CoA:coenzyme A transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D CDIF630_02580 abfD; bifunctional 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-delta-isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D CDIF630_00877 plfB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CDIF630_02936 pfo; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CDIF630_00231 vorB1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02431 vorB2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02671 vorB3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_00232 vorA1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02430 vorA2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02670 vorA3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_00916 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CDIF630_02933 bdhA; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D CDIF630_01735 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pdc00660]
D CDIF630_01735 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CDIF630_01126 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CDIF630_01127 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CDIF630_01128 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pdc00562]
D CDIF630_03123 putative NAD(P)-binding oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D CDIF630_03464 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pdc00190]
D CDIF630_03710 hydrogenase (NADP+, ferredoxin), NADPH-binding subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CDIF630_03711 hydrogenase (NADP+, ferredoxin), ferredoxin-binding subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CDIF630_03712 hydrogenase (NADP+, ferredoxin), iron hydrogenase subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CDIF630_03781 atpA2; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CDIF630_03779 atpD2; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CDIF630_03780 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CDIF630_03782 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CDIF630_03778 atpC2; ATP hydrolase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CDIF630_03785 atpB2; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CDIF630_03783 atpF2; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CDIF630_03784 atpE2; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CDIF630_03239 atpA1; V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D CDIF630_03238 atpB1; V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D CDIF630_03241 atpC1; V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D CDIF630_03237 atpD1; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D CDIF630_03242 atpE1; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D CDIF630_03240 atpF1; V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D CDIF630_03245 uncharacterized protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D CDIF630_03244 atpI1; V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D CDIF630_03243 atpK; V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CDIF630_00461 cobalt-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pdc00710]
D CDIF630_03465 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CDIF630_03466 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CDIF630_01964 gapB; glyceraldehyde-3-phosphate dehydrogenase (GAPDH) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CDIF630_00531 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03420 gatY2; D-tagatose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_01340 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CDIF630_02559 tkt'1; transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_02560 tkt1; transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_03770 tkt'2; transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_03771 tkt2; transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_02558 rpiB1; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CDIF630_03791 rpiB2; ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CDIF630_03464 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CDIF630_02557 rpe1; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CDIF630_02828 rpe2; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CDIF630_02567 tal2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CDIF630_02652 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:pdc00720]
D CDIF630_02936 pfo; pyruvate synthase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CDIF630_02652 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CDIF630_00083 pycA; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CDIF630_01139 fumA; fumarate hydratase class i, subunit A K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CDIF630_01140 fumB; fumarate hydratase class i, subunit B K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CDIF630_02580 abfD; bifunctional 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-delta-isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_00231 vorB1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02431 vorB2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_02671 vorB3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CDIF630_00232 vorA1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02430 vorA2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_02670 vorA3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CDIF630_00233 vorA'1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit N-terminal region K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CDIF630_02429 vorA'2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit N-terminal region K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CDIF630_02669 vorA'3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit N-terminal region K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CDIF630_00230 vorC1; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), gamma subunit (ferredoxin) K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CDIF630_02432 vorC2; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), gamma subunit (ferredoxin) K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CDIF630_02672 vorC3; 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), gamma subunit (ferredoxin) K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CDIF630_00952 acnB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CDIF630_02140 accA; acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CDIF630_02143 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CDIF630_02142 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CDIF630_02141 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CDIF630_03619 fdhF; formate dehydrogenase-H (selenocysteine) K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CDIF630_03615 hydA; iron hydrogenase K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D CDIF630_03616 hydN2; electron transport protein K25124 hycB; FeS-containing electron transfer protein
D CDIF630_03614 hydN1; electron transport protein K25124 hycB; FeS-containing electron transfer protein
D CDIF630_00834 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CDIF630_00836 folD; bifunctional methylenetetrahydrofolate dehydrogenase (NADP+) / methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CDIF630_00835 fchA; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CDIF630_00838 metF; putative electron bifurcating methylenetetrahydrofolate reductase, large subunit K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CDIF630_00843 acsE; 5-methyltetrahydrofolate:corrinoid / iron-sulfur protein co-methyltransferase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D CDIF630_00296 putative CO dehydrogenase (NAD), catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CDIF630_00832 cooS; anaerobic carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CDIF630_00297 putative CO dehydrogenase (NAD), electron transport subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CDIF630_00844 cdhC; acetyl-CoA synthase, subunit alpha / beta K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D CDIF630_00842 acsC; corrinoid / iron-sulfur protein, large subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D CDIF630_00841 acsD; corrinoid / iron-sulfur protein, small subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D CDIF630_02937 phosphate acyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_02124 eutD; ethanolamine phosphate acetyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_01323 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:pdc00680]
D CDIF630_03619 fdhF; formate dehydrogenase-H (selenocysteine) K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CDIF630_03615 hydA; iron hydrogenase K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D CDIF630_03616 hydN2; electron transport protein K25124 hycB; FeS-containing electron transfer protein
D CDIF630_03614 hydN1; electron transport protein K25124 hycB; FeS-containing electron transfer protein
D CDIF630_00842 acsC; corrinoid / iron-sulfur protein, large subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D CDIF630_00841 acsD; corrinoid / iron-sulfur protein, small subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D CDIF630_00296 putative CO dehydrogenase (NAD), catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CDIF630_00832 cooS; anaerobic carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CDIF630_00297 putative CO dehydrogenase (NAD), electron transport subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CDIF630_03101 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_02988 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_03462 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CDIF630_00531 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_03420 gatY2; D-tagatose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CDIF630_01340 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_03394 pfp; diphosphate-fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CDIF630_00947 oxidative stress glutamate dehydrogenase (glutamate synthase-like) (rubredoxin) K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D CDIF630_00293 uncharacterized protein, FmdE-family K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D CDIF630_01323 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CDIF630_03463 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CDIF630_01131 hpr; hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CDIF630_00363 phosphothreonine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CDIF630_02014 putative phosphatase, phosphoserine phosphatase-like K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pdc00910]
D CDIF630_02674 putative nitrite / sulfite reductase-like oxidoreductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D CDIF630_02400 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CDIF630_02349 uncharacterized protein, aldolase-type K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CDIF630_03109 nit; bifunctional nitrilase / nitrile hydratase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CDIF630_00301 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CDIF630_01499 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CDIF630_01705 nfnB; NADH-dependent reduced ferredoxin:NADP+ oxidoreductase, subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CDIF630_02446 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pdc00920]
D CDIF630_01648 ssuA1; ABC-type transport system, alkanesulfonates-family extracellular solute-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CDIF630_03273 ssuA2; ABC-type transport system, sulfonate-family extracellular solute-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CDIF630_01646 ssuC1; ABC-type transport system, sulfonates-family permease K15554 ssuC; sulfonate transport system permease protein
D CDIF630_03275 ssuC2; ABC-type transport system, sulfonate-family permease K15554 ssuC; sulfonate transport system permease protein
D CDIF630_01647 ssuB1; ABC-type transport system, sulfonates-family ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CDIF630_03274 ssuB2; ABC-type transport system, sulfonate-family ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CDIF630_02466 asrA; anaerobic sulfite reductase subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CDIF630_02465 asrB; anaerobic sulfite reductase subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CDIF630_02464 asrC; anaerobic sulfite reductase subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D CDIF630_01703 sseA1; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CDIF630_01768 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CDIF630_01849 cysM; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CDIF630_01767 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CDIF630_02028 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pdc00061]
D CDIF630_02140 accA; acetyl-CoA carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CDIF630_02143 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CDIF630_02142 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CDIF630_02141 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CDIF630_01202 acpP1; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D CDIF630_01332 acpP2; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D CDIF630_01330 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CDIF630_01328 fabH; beta-ketoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CDIF630_01333 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CDIF630_01331 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_02830 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_00244 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CDIF630_01329 fabK; enoyl-[acyl-carrier-protein] reductase (NADH) K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pdc00071]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_01194 bcd; butyryl-CoA dehydrogenase, catalytic subunit K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pdc00561]
D CDIF630_03367 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_01542 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CDIF630_00857 glpK1; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CDIF630_01327 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CDIF630_02885 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CDIF630_02017 plsC2; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CDIF630_01912 plsC1; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CDIF630_02683 dgkA; putative undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CDIF630_02283 dagK; diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CDIF630_00034 ugtP1; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CDIF630_01500 ugtP2; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:pdc00564]
D CDIF630_02884 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CDIF630_02885 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CDIF630_02017 plsC2; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CDIF630_01912 plsC1; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CDIF630_02683 dgkA; putative undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CDIF630_02283 dagK; diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CDIF630_01562 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CDIF630_01850 putative membrane glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CDIF630_02116 eutA; ethanolamine reactivating factor for ammonia lyase eutBC K04019 eutA; ethanolamine utilization protein EutA
D CDIF630_02117 eutB; ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D CDIF630_02118 eutC; ethanolamine ammonia lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D CDIF630_02365 cdsA; phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CDIF630_01483 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CDIF630_00313 cls1; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CDIF630_03709 cls2; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CDIF630_01745 putative esterase, SGNH hydrolase-type K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pdc00230]
D CDIF630_01962 putative hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CDIF630_01369 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CDIF630_01372 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03828 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CDIF630_00342 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CDIF630_00346 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CDIF630_00344 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CDIF630_00347 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CDIF630_00343 purG; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CDIF630_00340 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CDIF630_00341 purC2; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CDIF630_00618 purC1; phosphoribosylaminoimidazole-succinocarboxamide synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CDIF630_01490 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CDIF630_00345 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CDIF630_00960 purH'; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CDIF630_03008 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CDIF630_02789 putative membrane-associated 5'-nucleotidase / phosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CDIF630_01373 pupG; purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CDIF630_01841 uncharacterized protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CDIF630_02893 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CDIF630_02946 hpt1; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CDIF630_03527 hpt2; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CDIF630_02574 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CDIF630_02568 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CDIF630_00320 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CDIF630_01844 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CDIF630_02842 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CDIF630_03279 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CDIF630_01414 nrdZ; vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CDIF630_03278 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CDIF630_00204 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CDIF630_03007 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CDIF630_03804 gppA; guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CDIF630_00473 yjbM; GTP pyrophosphokinase YjbM K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CDIF630_03983 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CDIF630_01941 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CDIF630_02022 ade2; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CDIF630_00160 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CDIF630_02248 N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
C 00240 Pyrimidine metabolism [PATH:pdc00240]
D CDIF630_03910 carB1; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CDIF630_03912 carB2; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CDIF630_03911 carA1; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CDIF630_03913 carA2; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CDIF630_00305 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CDIF630_03967 putative amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CDIF630_01694 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CDIF630_00307 pyrD; dihydroorotate dehydrogenase (NAD+), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CDIF630_00306 pyrK; dihydroorotate dehydrogenase (NAD+), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CDIF630_02300 preA1; dihydropyrimidine dehydrogenase (NAD+) K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D CDIF630_00308 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CDIF630_03914 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CDIF630_02369 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CDIF630_01290 putative maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CDIF630_02016 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CDIF630_00670 thrS_udk; fusion protein threonine-tRNA ligase / uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CDIF630_02789 putative membrane-associated 5'-nucleotidase / phosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CDIF630_01841 uncharacterized protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CDIF630_03790 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CDIF630_02849 pyrR; bifunctional uracil phosphoribosyltransferase / regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CDIF630_01374 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CDIF630_02682 cdd1; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CDIF630_00204 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CDIF630_03279 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CDIF630_01414 nrdZ; vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CDIF630_03278 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CDIF630_03788 comEB2; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CDIF630_02104 comEB1; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CDIF630_03865 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CDIF630_02645 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CDIF630_00118 thyX; thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CDIF630_02306 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_03470 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pdc00250]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_02611 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CDIF630_02765 ansB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CDIF630_02950 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CDIF630_01809 asnB2; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CDIF630_00519 asnB1; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CDIF630_03000 putative beta-ureidopropionase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CDIF630_00615 omega-amidase NIT2 K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CDIF630_02764 aspD; bifunctional aspartate aminotransferase / L-aspartate beta-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CDIF630_01984 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CDIF630_02747 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CDIF630_03983 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CDIF630_01490 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CDIF630_00305 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CDIF630_02389 isoleucine 2-epimerase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CDIF630_01705 nfnB; NADH-dependent reduced ferredoxin:NADP+ oxidoreductase, subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CDIF630_00301 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CDIF630_01499 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CDIF630_03910 carB1; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CDIF630_03912 carB2; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CDIF630_03911 carA1; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CDIF630_03913 carA2; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CDIF630_00671 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CDIF630_00236 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CDIF630_00342 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pdc00260]
D CDIF630_01478 dapG; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_02276 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_03520 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CDIF630_01314 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CDIF630_01751 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CDIF630_02348 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CDIF630_02347 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CDIF630_02845 ltaE; low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CDIF630_03101 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_02988 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_03367 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CDIF630_03463 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CDIF630_01131 hpr; hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CDIF630_00363 phosphothreonine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CDIF630_02014 putative phosphatase, phosphoserine phosphatase-like K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D CDIF630_01838 gcvTPA; glycine cleavage system, subunit A K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CDIF630_01839 gcvPB; glycine cleavage system, subunit B K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00845 gcvH; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
D CDIF630_03517 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CDIF630_02763 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CDIF630_02249 racX; putative aspartate racemase RacX K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_02489 asp / glu racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
C 00270 Cysteine and methionine metabolism [PATH:pdc00270]
D CDIF630_01768 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CDIF630_01849 cysM; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CDIF630_01767 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CDIF630_02995 putative pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02952 patB2; putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03752 patB3; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02731 patB1; putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03313 malY; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03918 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CDIF630_00247 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CDIF630_01009 speH; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CDIF630_01010 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CDIF630_02863 mtnN; bifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CDIF630_02893 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CDIF630_02305 putative adenosine-derivate deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CDIF630_02312 putative adenosine-derivate deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CDIF630_02962 putative adenosine-derivate deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CDIF630_02622 aromatic-amino-acid aminotransferase, tyrB-like K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CDIF630_03898 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CDIF630_01052 putative phage C-5 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03432 putative DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03920 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CDIF630_01478 dapG; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_02276 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_03520 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CDIF630_01314 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CDIF630_01751 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CDIF630_02028 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CDIF630_02027 metY; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01703 sseA1; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CDIF630_02396 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CDIF630_02764 aspD; bifunctional aspartate aminotransferase / L-aspartate beta-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CDIF630_02249 racX; putative aspartate racemase RacX K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_02489 asp / glu racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_03517 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CDIF630_01131 hpr; hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:pdc00280]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_01194 bcd; butyryl-CoA dehydrogenase, catalytic subunit K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_00916 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pdc00290]
D CDIF630_02763 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CDIF630_01126 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CDIF630_01127 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CDIF630_01128 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CDIF630_01735 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CDIF630_01734 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CDIF630_02233 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CDIF630_01125 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pdc00300]
D CDIF630_01314 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CDIF630_01751 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CDIF630_01478 dapG; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_02276 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_03520 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CDIF630_03950 dapA4; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CDIF630_03518 dapA2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CDIF630_03521 dapA3; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CDIF630_03522 dapB1; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CDIF630_03525 dapB2; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CDIF630_03523 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CDIF630_02252 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CDIF630_00415 putative peptidase, M20A family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CDIF630_00257 peptidase M20A, peptidase V-related K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CDIF630_02177 peptidase M20A, peptidase V-related K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CDIF630_02844 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CDIF630_02007 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CDIF630_02275 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CDIF630_03516 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D CDIF630_03993 aromatic-amino-acid aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CDIF630_02666 branched-chain-amino-acid transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CDIF630_02918 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CDIF630_02909 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pdc00310]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02249 racX; putative aspartate racemase RacX K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_02489 asp / glu racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_02931 ctfA; butyrate--acetoacetate CoA-transferase, subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_02932 ctfB; butyrate--acetoacetate CoA-transferase, subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_00570 ord; 2,4-diaminopentanoate dehydrogenase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pdc00220]
D CDIF630_02251 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CDIF630_01984 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CDIF630_02747 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CDIF630_00671 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CDIF630_01499 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CDIF630_03910 carB1; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CDIF630_03912 carB2; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CDIF630_03911 carA1; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CDIF630_03913 carA2; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CDIF630_00301 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_02254 argJ; bifunctional amino-acid N-acetyltransferase / glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CDIF630_02253 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CDIF630_02255 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CDIF630_02252 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CDIF630_00428 argE; putative DapE / ArgE-like peptidase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pdc00330]
D CDIF630_03866 speA2; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CDIF630_01008 speA1; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CDIF630_01011 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D CDIF630_01010 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CDIF630_01009 speH; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_01361 bltD; spermine / spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CDIF630_01660 proC1; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CDIF630_03581 proC2; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CDIF630_03325 pepI; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CDIF630_03582 putative 4-hydroxyproline dehydratase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03533 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CDIF630_00570 ord; 2,4-diaminopentanoate dehydrogenase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
D CDIF630_03540 prdA; D-proline reductase proprotein prdA K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CDIF630_03537 prdB; proline reductase PrdB subunit K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00340 Histidine metabolism [PATH:pdc00340]
D CDIF630_01717 hisG; ATP phosphoribosyltransferase, catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CDIF630_01716 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CDIF630_01723 hisI; bifunctional phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CDIF630_01721 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CDIF630_01720 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CDIF630_01722 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CDIF630_01719 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CDIF630_01718 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02433 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_01213 putative histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CDIF630_00853 hisK; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CDIF630_02423 putative histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pdc00350]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01718 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02433 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02622 aromatic-amino-acid aminotransferase, tyrB-like K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:pdc00360]
D CDIF630_01198 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01718 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02433 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02622 aromatic-amino-acid aminotransferase, tyrB-like K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CDIF630_02355 putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
C 00380 Tryptophan metabolism [PATH:pdc00380]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_03109 nit; bifunctional nitrilase / nitrile hydratase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pdc00400]
D CDIF630_01617 aroF1; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CDIF630_02034 aroF2; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CDIF630_02035 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CDIF630_02450 aroD; dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CDIF630_02040 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CDIF630_02036 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CDIF630_02037 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CDIF630_02038 pheA; bifunctional P-protein, chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CDIF630_02041 tyrC; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01718 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02433 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02622 aromatic-amino-acid aminotransferase, tyrB-like K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pdc00410]
D CDIF630_02389 isoleucine 2-epimerase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_01678 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CDIF630_02306 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_03470 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_01194 bcd; butyryl-CoA dehydrogenase, catalytic subunit K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:pdc00430]
D CDIF630_01702 cephalosporin acylase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CDIF630_00301 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CDIF630_02937 phosphate acyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_02124 eutD; ethanolamine phosphate acetyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D CDIF630_01323 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pdc00440]
D CDIF630_03116 phnXW; bifunctional phosphonoacetaldehyde hydrolase / aminoethylphosphonate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CDIF630_00856 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CDIF630_03850 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D CDIF630_03852 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D CDIF630_03851 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D CDIF630_03847 phnL; ABC-type transport system, phosphonate-specific ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D CDIF630_03846 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D CDIF630_03849 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D CDIF630_00805 putative metallo-hydrolase / oxidoreductase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
D CDIF630_03845 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:pdc00450]
D CDIF630_02995 putative pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02952 patB2; putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03752 patB3; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02731 patB1; putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03313 malY; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03918 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CDIF630_03898 mdeA; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CDIF630_03999 sufS2; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CDIF630_01876 trxB1; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CDIF630_02596 trxB3; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CDIF630_02344 trxB2; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CDIF630_02743 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CDIF630_02742 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CDIF630_03966 dgaE; D-glucosaminate-6-phosphate ammonia lyase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CDIF630_03854 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pdc00460]
D CDIF630_03109 nit; bifunctional nitrilase / nitrile hydratase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CDIF630_01702 cephalosporin acylase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CDIF630_02765 ansB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CDIF630_02950 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CDIF630_03101 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_02988 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pdc00470]
D CDIF630_03774 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CDIF630_01569 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CDIF630_03120 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CDIF630_03118 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CDIF630_02249 racX; putative aspartate racemase RacX K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_02489 asp / glu racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CDIF630_00671 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CDIF630_03882 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CDIF630_02907 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CDIF630_01549 L-ala-D / L-glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CDIF630_02844 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CDIF630_02007 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CDIF630_02275 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CDIF630_00570 ord; 2,4-diaminopentanoate dehydrogenase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
D CDIF630_00576 orr; ornithine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D CDIF630_00574 oraE; D-ornithine aminomutase, beta subunit K17898 oraE; D-ornithine 4,5-aminomutase subunit beta [EC:5.4.3.5]
D CDIF630_00573 oraS; D-ornithine aminomutase, alpha subunit K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5]
D CDIF630_03533 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CDIF630_03540 prdA; D-proline reductase proprotein prdA K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CDIF630_03537 prdB; proline reductase PrdB subunit K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00480 Glutathione metabolism [PATH:pdc00480]
D CDIF630_01702 cephalosporin acylase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CDIF630_01544 putative lamB-like protein, UPF0271 family K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CDIF630_01454 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CDIF630_00823 pepD; cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CDIF630_01010 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
D CDIF630_03312 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pdc00542]
D CDIF630_01367 putative glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pdc00541]
D CDIF630_02972 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_03801 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CDIF630_02971 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CDIF630_03034 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CDIF630_02738 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CDIF630_03042 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CDIF630_03829 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CDIF630_01169 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:pdc00550]
D CDIF630_00239 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CDIF630_03707 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CDIF630_03832 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CDIF630_02907 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CDIF630_02918 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CDIF630_01569 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CDIF630_02909 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CDIF630_02366 uppS1; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CDIF630_03025 uppS2; putative undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CDIF630_01488 uppP1; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CDIF630_03270 uppP2; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CDIF630_02908 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CDIF630_02905 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CDIF630_00899 putative penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CDIF630_01295 putative penicillin-binding protein with a N-terminal TonB-box K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CDIF630_01378 uncharacterized protein, beta-lactamase / transpeptidase-like K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CDIF630_02910 spoVD; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CDIF630_01445 dacF2; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_00627 dacF1; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_02745 dacF4; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_03923 vanY3; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_02753 vanY2; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_01804 vanY1; D-alanyl-D-alanine carboxypeptidase, VanY-like K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:pdc00552]
D CDIF630_01488 uppP1; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CDIF630_03270 uppP2; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CDIF630_01367 putative glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CDIF630_03120 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CDIF630_03118 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CDIF630_03119 dltB; D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D CDIF630_03122 dltD; putative D-alanine transferase DltD K03740 dltD; D-alanine transfer protein
D CDIF630_03029 transcriptional regulator, LytR family K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CDIF630_03028 transcriptional regulator, LytR family K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CDIF630_00034 ugtP1; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CDIF630_01500 ugtP2; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pdc00543]
D CDIF630_01367 putative glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CDIF630_02795 putative membrane-bound 0-ACYL transferase, MBOAT family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CDIF630_01768 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pdc00730]
D CDIF630_01889 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CDIF630_01774 thiD; bifunctional hydroxymethylpyrimidine / phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CDIF630_01891 thiF; sulfur carrier protein ThiS adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D CDIF630_01432 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_00871 iscS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_00872 thiI; sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CDIF630_01893 thiH1; 2-iminoacetate synthase K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CDIF630_02387 thiH2; 2-iminoacetate synthase K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CDIF630_01356 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CDIF630_01892 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CDIF630_01775 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CDIF630_01776 thiE1; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CDIF630_01894 thiE2; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CDIF630_03668 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CDIF630_02829 thiamin monophosphate phosphatase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CDIF630_02827 thiN; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CDIF630_00160 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pdc00740]
D CDIF630_01883 ribBA; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase-2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CDIF630_01885 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CDIF630_01882 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CDIF630_01884 ribE; riboflavin synthase alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CDIF630_01471 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CDIF630_01775 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CDIF630_01962 putative hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CDIF630_01369 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:pdc00750]
D CDIF630_01509 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CDIF630_02347 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pdc00760]
D CDIF630_02611 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CDIF630_02612 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CDIF630_02610 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CDIF630_03858 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CDIF630_01373 pupG; purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CDIF630_02789 putative membrane-associated 5'-nucleotidase / phosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D CDIF630_02776 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CDIF630_00913 nadE; NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CDIF630_01458 npdA; NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CDIF630_01189 ppnK; NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:pdc00770]
D CDIF630_01735 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CDIF630_01734 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CDIF630_02233 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CDIF630_01679 panB; ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CDIF630_00309 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CDIF630_01678 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CDIF630_03875 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CDIF630_02840 coaBC; bifunctional phosphopantothenoylcysteine synthetase / decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CDIF630_02809 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CDIF630_01276 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CDIF630_03777 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CDIF630_02306 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_03470 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pdc00780]
D CDIF630_01333 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CDIF630_01331 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_02830 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_00244 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CDIF630_00422 bioB1; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CDIF630_02386 bioB2; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CDIF630_03878 birA; bifunctional ligase / repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pdc00785]
D CDIF630_00849 lipM; octanoyltransferase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CDIF630_00847 putative radical SAM superfamily protein K09711 lipS1; lipoyl synthase
D CDIF630_00848 putative radical SAM superfamily protein K24689 lipS2; lipoyl synthase
D CDIF630_00108 putative lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CDIF630_01832 lplA; lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00100 acoC; acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CDIF630_01838 gcvTPA; glycine cleavage system, subunit A K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CDIF630_01839 gcvPB; glycine cleavage system, subunit B K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CDIF630_00845 gcvH; glycine cleavage system, H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pdc00790]
D CDIF630_01613 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CDIF630_01615 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CDIF630_01616 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CDIF630_01614 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CDIF630_03550 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CDIF630_01883 ribBA; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase-2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CDIF630_01609 pabA; aminodeoxychorismate synthase, component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CDIF630_01610 pabB; aminodeoxychorismate synthase, component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CDIF630_01611 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CDIF630_00948 putative metallo-beta-lactamase superfamily protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CDIF630_01901 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CDIF630_01902 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CDIF630_01900 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CDIF630_01225 moeA; molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CDIF630_02293 putative molybdopterin-guanine dinucleotide biosynthesis protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CDIF630_01897 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pdc00670]
D CDIF630_00834 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CDIF630_00836 folD; bifunctional methylenetetrahydrofolate dehydrogenase (NADP+) / methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CDIF630_00835 fchA; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CDIF630_03101 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_02988 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CDIF630_00344 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CDIF630_00345 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CDIF630_00960 purH'; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CDIF630_02837 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CDIF630_03918 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CDIF630_00118 thyX; thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CDIF630_00838 metF; putative electron bifurcating methylenetetrahydrofolate reductase, large subunit K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CDIF630_03767 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pdc00860]
D CDIF630_03727 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CDIF630_03729 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CDIF630_01924 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CDIF630_01864 putative flavodoxin K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D CDIF630_03728 cobA-hemD; bifunctional uroporphyrinogen-III methyltransferase / uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CDIF630_03726 sirC; precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CDIF630_03730 cbiKP; sirohydrochlorin cobaltochelatase CbiKP K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CDIF630_03732 cbiH; cobalt-factor III methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CDIF630_03734 cbiF; cobalt-precorrin-4 methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CDIF630_03733 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CDIF630_03731 cbiJ; cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CDIF630_03737 cbiD; cobalt-precorrin-5B (C1)-methyl transferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CDIF630_03735 cbiT; cobalt-precorrin-6B (C15)-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CDIF630_03736 cbiE; cobalt-precorrin-7 (C5)-methyl transferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CDIF630_03738 cbiC; cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CDIF630_03742 cbiA; cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CDIF630_03743 cobQ; adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CDIF630_03741 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CDIF630_03747 cobU; bifunctional adenosylcobinamide-phosphate guanylyltransferase / adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CDIF630_03746 cobS; adenosyl cobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CDIF630_03748 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CDIF630_03745 cobC; adenosylcobalamin / alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CDIF630_03739 pduX; L-threonine kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D CDIF630_03740 cobD2; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D CDIF630_02947 cobD1; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D CDIF630_02123 eutT; ethanolamine corrinoid cobalamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D CDIF630_03133 putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pdc00130]
D CDIF630_00928 floX; putative flavodoxin K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CDIF630_01622 wrbA; putative flavodoxin protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pdc00900]
D CDIF630_01356 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CDIF630_02361 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CDIF630_00109 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CDIF630_03886 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CDIF630_00110 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CDIF630_02359 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CDIF630_02018 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_01354 ispA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CDIF630_02366 uppS1; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CDIF630_03025 uppS2; putative undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
D CDIF630_00916 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CDIF630_02559 tkt'1; transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_02560 tkt1; transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_03770 tkt'2; transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CDIF630_03771 tkt2; transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CDIF630_01416 putative (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CDIF630_02628 alpha-hydroxy acid dehydrogenase, FMN-dependent K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pdc00946]
D CDIF630_03961 putative NADPH-dependent FMN reductase K26176 flr; flavone/flavonol reductase
D CDIF630_03958 chalcone isomerase K26177 chi; chalcone isomerase
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:pdc00261]
D CDIF630_01416 putative (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CDIF630_02628 alpha-hydroxy acid dehydrogenase, FMN-dependent K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CDIF630_01478 dapG; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_02276 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CDIF630_03520 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CDIF630_03950 dapA4; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CDIF630_03518 dapA2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CDIF630_03521 dapA3; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CDIF630_03522 dapB1; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CDIF630_03525 dapB2; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pdc00521]
D CDIF630_02705 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CDIF630_01746 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CDIF630_03043 pgcA2; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CDIF630_02705 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:pdc00401]
D CDIF630_02041 tyrC; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01718 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02433 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02622 aromatic-amino-acid aminotransferase, tyrB-like K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CDIF630_01330 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CDIF630_01331 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_02830 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CDIF630_01202 acpP1; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D CDIF630_01332 acpP2; acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CDIF630_00247 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CDIF630_00576 orr; ornithine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pdc00362]
D CDIF630_01198 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pdc00627]
D CDIF630_03109 nit; bifunctional nitrilase / nitrile hydratase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CDIF630_02931 ctfA; butyrate--acetoacetate CoA-transferase, subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_02932 ctfB; butyrate--acetoacetate CoA-transferase, subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pdc00625]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_02439 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CDIF630_01926 yjjG; pyrimidine 5'-nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CDIF630_01926 yjjG; pyrimidine 5'-nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CDIF630_00296 putative CO dehydrogenase (NAD), catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CDIF630_00832 cooS; anaerobic carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CDIF630_00297 putative CO dehydrogenase (NAD), electron transport subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CDIF630_03109 nit; bifunctional nitrilase / nitrile hydratase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pdc00626]
D CDIF630_00462 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CDIF630_03250 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pdc03020]
D CDIF630_00132 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CDIF630_00133 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CDIF630_00168 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CDIF630_02841 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pdc03010]
D CDIF630_01121 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CDIF630_02371 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CDIF630_00145 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CDIF630_00167 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CDIF630_00156 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CDIF630_03992 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CDIF630_00135 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CDIF630_00153 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CDIF630_00175 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CDIF630_00138 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CDIF630_00166 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CDIF630_00134 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CDIF630_00165 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CDIF630_00152 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D CDIF630_01472 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CDIF630_01406 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CDIF630_00148 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CDIF630_03990 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CDIF630_00143 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CDIF630_02719 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CDIF630_02691 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CDIF630_00127 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CDIF630_00142 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CDIF630_00139 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CDIF630_00140 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CDIF630_00151 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CDIF630_00154 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CDIF630_00130 rplL; 50S ribosomal protein L7 / L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CDIF630_03986 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CDIF630_00129 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CDIF630_00126 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CDIF630_00174 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CDIF630_00149 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CDIF630_00158 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CDIF630_00146 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CDIF630_00169 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CDIF630_00155 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CDIF630_01410 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CDIF630_00800 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CDIF630_01308 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CDIF630_00144 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CDIF630_00141 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CDIF630_00150 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CDIF630_01310 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CDIF630_02814 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CDIF630_00147 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CDIF630_00157 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CDIF630_03798 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CDIF630_01325 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CDIF630_00123 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CDIF630_04011 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CDIF630_00799 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CDIF630_00164 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CDIF630_00017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00212 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00199 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00439 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_02980 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_03725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00177 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_03870 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00035 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_01171 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00206 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00214 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_03724 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00201 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00013 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00179 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00208 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00036 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_03869 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_02979 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_01172 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00202 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_03723 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_03868 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00441 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00215 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_01174 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00209 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00180 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pdc00970]
D CDIF630_00018 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00178 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00207 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00213 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00224 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00079 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CDIF630_00048 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00069 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00188 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00058 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00181 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00216 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00064 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00184 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00222 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00057 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CDIF630_00078 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CDIF630_00049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CDIF630_00070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CDIF630_00189 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CDIF630_00041 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00182 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00219 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_03981 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00068 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00223 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00062 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00187 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_01173 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00055 tRNA-His K14226 tRNA-His; tRNA His
D CDIF630_00076 tRNA-His K14226 tRNA-His; tRNA His
D CDIF630_00196 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CDIF630_00015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00059 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00217 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00067 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_01835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_01274 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00056 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00071 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00077 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00190 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_03982 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00016 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00040 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00052 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00053 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00060 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00074 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00075 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00198 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00211 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00218 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00051 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CDIF630_00073 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CDIF630_00197 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CDIF630_00054 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CDIF630_00193 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CDIF630_00195 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CDIF630_00192 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00072 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00191 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_00065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_00185 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_02978 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_03979 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_00194 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CDIF630_00046 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CDIF630_00066 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CDIF630_00186 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CDIF630_00043 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00063 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00080 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00183 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00221 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_03980 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_02726 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CDIF630_00114 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CDIF630_02282 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CDIF630_01436 alaS; alanine-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CDIF630_02394 putative threonyl / alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CDIF630_03002 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CDIF630_02478 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CDIF630_02676 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CDIF630_02675 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CDIF630_00687 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CDIF630_00024 serS1; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CDIF630_03107 serS2; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CDIF630_02742 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CDIF630_03966 dgaE; D-glucosaminate-6-phosphate ammonia lyase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CDIF630_00116 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CDIF630_03854 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CDIF630_02837 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CDIF630_03553 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CDIF630_02772 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CDIF630_02871 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CDIF630_03872 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CDIF630_00826 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CDIF630_00113 proS2; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CDIF630_00112 proS1; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CDIF630_03003 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CDIF630_00814 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CDIF630_00815 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CDIF630_01689 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CDIF630_02862 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pdc03060]
D CDIF630_00159 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D CDIF630_00124 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D CDIF630_03461 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CDIF630_03066 preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D CDIF630_04008 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CDIF630_00260 secA1; protein translocase subunit SecA1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_03055 secA2; protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_01405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CDIF630_00028 Bacteria_large_SRP K01983 ffs; SRP RNA
D CDIF630_01403 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CDIF630_01487 spsB3; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CDIF630_00667 spsB1; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CDIF630_00668 spsB2; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CDIF630_02107 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CDIF630_02851 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pdc04122]
D CDIF630_01432 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_00871 iscS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_01703 sseA1; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CDIF630_01434 mnmA; transfer RNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CDIF630_01901 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CDIF630_00237 thiosulfate sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D CDIF630_01902 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CDIF630_01900 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CDIF630_00872 thiI; sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CDIF630_01890 thiS; sulfur carrier protein K03154 thiS; sulfur carrier protein
D CDIF630_01891 thiF; sulfur carrier protein ThiS adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pdc03018]
D CDIF630_03462 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CDIF630_01474 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CDIF630_03455 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CDIF630_00879 cshA1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_02415 dbpA; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_00950 cshA2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_01887 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CDIF630_03799 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CDIF630_01485 RNase Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CDIF630_01443 ribonuclease J family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_02707 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CDIF630_00315 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CDIF630_02179 hfq; Hfq-like RNA chaperone K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pdc03030]
D CDIF630_02636 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CDIF630_03701 dnaE; DNA polymerase III DnaE subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CDIF630_01460 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CDIF630_00030 dnaX; DNA polymerase III subunit gamma / tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CDIF630_03864 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CDIF630_02720 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CDIF630_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CDIF630_03985 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CDIF630_01618 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CDIF630_03991 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03222 putative phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_01415 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CDIF630_01275 polA; DNA polymerase I (POLI) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CDIF630_03610 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pdc03410]
D CDIF630_00312 putative 8-oxoguanine-DNA-glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CDIF630_00678 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CDIF630_02728 ung; uracil-DNA glycosylase (UDG) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CDIF630_01658 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CDIF630_01497 exoA; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CDIF630_00673 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CDIF630_01275 polA; DNA polymerase I (POLI) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CDIF630_03009 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CDIF630_03610 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pdc03420]
D CDIF630_03814 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CDIF630_03716 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CDIF630_03717 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CDIF630_03715 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CDIF630_00456 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_01178 putative helicase, superfamily 1, UvrD-family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00866 putative DNA helicase, UvrD / REP type K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00583 putative helicase, UvrD family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_01275 polA; DNA polymerase I (POLI) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CDIF630_03610 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pdc03430]
D CDIF630_02182 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CDIF630_00824 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CDIF630_02376 DNA mismatch repair protein, MutS2-like K07456 mutS2; DNA mismatch repair protein MutS2
D CDIF630_02181 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CDIF630_00456 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_01178 putative helicase, superfamily 1, UvrD-family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00866 putative DNA helicase, UvrD / REP type K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00583 putative helicase, UvrD family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_01352 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CDIF630_01353 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CDIF630_03009 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CDIF630_03991 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03222 putative phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03701 dnaE; DNA polymerase III DnaE subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CDIF630_01460 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CDIF630_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CDIF630_00030 dnaX; DNA polymerase III subunit gamma / tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CDIF630_02720 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CDIF630_03864 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CDIF630_02636 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CDIF630_03610 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CDIF630_01061 putative phage D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pdc03440]
D CDIF630_03009 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CDIF630_03991 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03222 putative phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_00004 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CDIF630_02678 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CDIF630_00032 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CDIF630_01484 recA; protein RecA (Recombinase a) K03553 recA; recombination protein RecA
D CDIF630_01275 polA; DNA polymerase I (POLI) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CDIF630_03071 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CDIF630_03070 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CDIF630_03072 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CDIF630_02811 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CDIF630_00249 yrrC; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CDIF630_03701 dnaE; DNA polymerase III DnaE subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CDIF630_01460 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CDIF630_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CDIF630_00030 dnaX; DNA polymerase III subunit gamma / tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CDIF630_02720 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CDIF630_03864 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CDIF630_02636 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CDIF630_02839 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pdc02010]
D CDIF630_01648 ssuA1; ABC-type transport system, alkanesulfonates-family extracellular solute-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CDIF630_03273 ssuA2; ABC-type transport system, sulfonate-family extracellular solute-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CDIF630_01646 ssuC1; ABC-type transport system, sulfonates-family permease K15554 ssuC; sulfonate transport system permease protein
D CDIF630_03275 ssuC2; ABC-type transport system, sulfonate-family permease K15554 ssuC; sulfonate transport system permease protein
D CDIF630_01647 ssuB1; ABC-type transport system, sulfonates-family ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CDIF630_03274 ssuB2; ABC-type transport system, sulfonate-family ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CDIF630_00989 modA; ABC-type transport system, molybdenum-specific extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CDIF630_02549 ABC-type transport system, molybdenum-like extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CDIF630_00990 modB; ABC-type transport system, molybdenum-specific permease K02018 modB; molybdate transport system permease protein
D CDIF630_02550 ABC-type transport system, molybdenum-like permease K02018 modB; molybdate transport system permease protein
D CDIF630_00991 modC; ABC-type transport system, molybdenum-specific ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CDIF630_03839 ABC-type transport system, iron-family extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CDIF630_03842 ABC-type transport system, iron-family extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CDIF630_03236 ABC-type transport system, iron-family extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CDIF630_03840 ABC-type transport system, iron-family permease K02011 afuB; iron(III) transport system permease protein
D CDIF630_03843 ABC-type transport system, iron-family permease K02011 afuB; iron(III) transport system permease protein
D CDIF630_03156 ABC-type transport system, iron-family permease K02011 afuB; iron(III) transport system permease protein
D CDIF630_03841 ABC-type transport system, iron-family ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CDIF630_03844 ABC-type transport system, iron-family ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CDIF630_03157 ABC-type transport system, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CDIF630_01163 potD; ABC-type transport system, spermidine / putrescine solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CDIF630_01162 potC; ABC-type transport system, spermidine / putrescine permease K11070 potC; spermidine/putrescine transport system permease protein
D CDIF630_01161 potB; ABC-type transport system, spermidine / putrescine permease K11071 potB; spermidine/putrescine transport system permease protein
D CDIF630_01160 potA; ABC-type transport system, spermidine / putrescine ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CDIF630_03510 ABC-type transport system, glycine betaine / carnitine / choline-like permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D CDIF630_01021 opuCC; ABC-type transport system, glycine betaine / carnitine / choline permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D CDIF630_01020 opuCA; ABC-type transport system, glycine betaine / carnitine / choline ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CDIF630_03509 ABC-type transport system, glycine betaine / carnitine / choline-like ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CDIF630_02702 ABC-type transport system, sugar-family ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CDIF630_00681 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CDIF630_00682 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CDIF630_00425 rbsB1; ABC-type transport system, ribose-specific extracellular solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CDIF630_01761 rbsB2; ABC-type transport system, ribose-specific extracellular solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CDIF630_00427 rbsC2; ABC-type transport system, ribose-specific permease K10440 rbsC; ribose transport system permease protein
D CDIF630_01760 rbsC1; ABC-type transport system, ribose-specific permease K10440 rbsC; ribose transport system permease protein
D CDIF630_00426 rbsA1; ABC-type transport system, ribose-specific ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CDIF630_01759 rbsA2; ABC-type transport system, ribose-specific ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CDIF630_03719 ABC-type transport system, sn-glycerol-3-phosphate-specific extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CDIF630_03721 ABC-type transport system, sn-glycerol-3-phosphate-specific permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CDIF630_03720 ABC-type transport system, sn-glycerol-3-phosphate-specific permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CDIF630_03722 ABC-type transport system, sn-glycerol-3-phosphate-specific ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CDIF630_03568 pstS; ABC-type transport system, phosphate extracellular solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CDIF630_03561 pstC; ABC-type transport system, phosphate-specific permease K02037 pstC; phosphate transport system permease protein
D CDIF630_03560 pstA; ABC-type transport system, phosphate-specific permease K02038 pstA; phosphate transport system permease protein
D CDIF630_03559 pstB; ABC-type transport system, phosphate-specific ATP-binding K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CDIF630_02406 ABC-type transport system, cystine / aminoacid-family extracellular solute-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CDIF630_02409 ABC-type transport system, cystine / aminoacid-family extracellular solute-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CDIF630_02407 ABC-type transport system, cystine / aminoacid-family permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D CDIF630_02408 ABC-type transport system, cystine / aminoacid-family permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D CDIF630_02404 ABC-type transport system, cystine / aminoacid-family ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CDIF630_00868 ABC-type transport system, aminoacid-family extracellular solute-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CDIF630_00869 ABC-type transport system, aminoacid-family permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D CDIF630_00870 ABC-type transport system, aminoacid-family ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CDIF630_01656 metQ; ABC-type transport system, methionine-specific substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CDIF630_01830 putative D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CDIF630_01655 metI; ABC-type transport system, methionine-specific permease K02072 metI; D-methionine transport system permease protein
D CDIF630_01654 metN; ABC-type transport system, methionine-specific ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CDIF630_00453 cbiN; ABC-type transport system, cobalt-specific extracellular solute-binding protein K02009 cbiN; cobalt/nickel transport protein
D CDIF630_00452 cbiM; cobalt transport protein K02007 cbiM; cobalt/nickel transport system permease protein
D CDIF630_00454 cbiQ1; ABC-type transport system, cobalt-specific permease K02008 cbiQ; cobalt/nickel transport system permease protein
D CDIF630_00455 cbiO; ABC-type transport system, cobalt-specific ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CDIF630_03256 bioY; biotin transporter K03523 bioY; biotin transport system substrate-specific component
D CDIF630_00558 ABC-type transport system, cobalt-specific permease K16785 ecfT; energy-coupling factor transport system permease protein
D CDIF630_00172 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CDIF630_00170 ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CDIF630_00171 ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CDIF630_01791 ABC-type transport system, permease K09696 natB; sodium transport system permease protein
D CDIF630_01790 ABC-type transport system, ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CDIF630_00444 ABC-type transport system, permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00942 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_01239 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_01238 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00443 ABC-type transport system, permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00943 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00492 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00445 ABC-type transport system, bacitracin / multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_00493 ABC-type transport system, multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_00940 ABC-type transport system, multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_01240 ABC-type transport system, multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_03338 ABC-type transport system, permease K11632 bceB; bacitracin transport system permease protein
D CDIF630_01701 ABC-type transport system, permease K11632 bceB; bacitracin transport system permease protein
D CDIF630_01700 ABC-type transport system, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CDIF630_03339 ABC-type transport system, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CDIF630_00781 cdd3; ABC-type transport system, lantibiotic / multidrug-family permease K20460 nukE; lantibiotic transport system permease protein
D CDIF630_00780 cdd2; ABC-type transport system, lantibiotic / multidrug-family permease K20461 nukG; lantibiotic transport system permease protein
D CDIF630_00782 cdd4; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D CDIF630_00607 spaE; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_01506 cprB; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_00608 spaG; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_01507 cprC; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_00606 spaF; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_01505 cprA; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_01950 ABC-type transport system, multidrug-family permease K16905 K16905; fluoroquinolone transport system permease protein
D CDIF630_03491 ABC-type transport system, multidrug-family permease K16905 K16905; fluoroquinolone transport system permease protein
D CDIF630_01949 ABC-type transport system, multidrug-family permease K16906 K16906; fluoroquinolone transport system permease protein
D CDIF630_03492 ABC-type transport system, multidrug-family permease K16906 K16906; fluoroquinolone transport system permease protein
D CDIF630_03493 ABC-type transport system, multidrug-family ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D CDIF630_01948 ABC-type transport system, multidrug-family ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D CDIF630_00560 ABC-type transport system, multidrug-family permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CDIF630_00561 ABC-type transport system, multidrug-family permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CDIF630_03083 ABC-type transport system, multidrug-family ATP-binding / permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01153 ABC-type transport system, multidrug-family ATP-binding protein / permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_02444 ABC-type transport system, multidrug-family ATP-binding / permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01636 ABC-type transport system, multidrug-family ATP-binding protein / permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_03082 ABC-type transport system, multidrug-family ATP-binding / permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01154 ABC-type transport system, multidrug-family ATP-binding protein / permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_02443 ABC-type transport system, multidrug-family ATP-binding / permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01637 ABC-type transport system, multidrug-family ATP-binding / permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_02847 ABC-type transport system, pristinamycin / multidrug-family ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pdc02060]
D CDIF630_03018 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CDIF630_03019 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CDIF630_02921 ptsG-BC; PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CDIF630_02920 ptsG-A; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03387 PTS system, glucose-like IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02761 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03311 PTS system, arabinose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03341 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03372 PTS system, glucose-like IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CDIF630_02759 PTS system, maltose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_03314 PTS system, arabinose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_01492 PTS system, glucose-like IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_00597 PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CDIF630_00934 bglF1; PTS system, beta-glucoside-specific IIABC component, bglF1 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03422 bglF5; PTS system, beta-glucoside-specific IIABC component, bglF5 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03400 bglF3; PTS system, beta-glucoside-specific IIABC component, bglF3 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03380 bglF2; PTS system, beta-glucoside-specific IIABC component, bglF2 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03410 bglF4; PTS system, beta-glucoside-specific IIABC component, bglF4 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03412 PTS system, beta-glucoside-like IIBC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_00515 bglF; PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03344 PTS system, maltose-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CDIF630_02571 mtlF; PTS system, mannitol-specific, EIIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D CDIF630_02573 mtlA; PTS system, mannitol-specific, IICB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CDIF630_03369 mngA; PTS system, 2-O-a-mannosyl-D-glycerate-specific IIABC component K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195]
D CDIF630_00252 PTS system, lactose / cellobiose-family IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03971 licA; PTS system, lichenan-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03148 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03363 PTS system, beta-glycoside-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03756 PTS system, lactose / cellobiose-family IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00983 PTS system, maltose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00253 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03972 licB; PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00981 PTS system, maltose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_01777 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03152 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03365 PTS system, beta-glycoside-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03755 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03333 PTS system, peptidoglycan degradation IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00254 PTS system, lactose / cellobiose-family IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03969 licC; PTS system, lichenan-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_00982 PTS system, maltose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03151 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03364 PTS system, beta-glycoside-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03754 PTS system, lactose / cellobiose-family IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03332 PTS system, peptidoglycan degradation IIC membrane component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_00408 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_00620 PTS system, ribitol-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_01218 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03350 xynA; PTS system, xyloside-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03351 xynB; PTS system, xyloside-specific IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CDIF630_03353 xynC; PTS system, xyloside-specific IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_03577 PTS system, mannose / fructose / sorbose-type IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_00623 PTS system, ribitol-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03352 xynD; PTS system, xyloside-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03578 PTS system, mannose / fructose / sorbose-type IIA component K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D CDIF630_01220 PTS system, mannose-type IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D CDIF630_03579 PTS system, mannose / fructose / sorbose-type IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D CDIF630_01221 PTS system, mannose-type IIC component K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D CDIF630_01222 PTS system, mannose-type IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D CDIF630_03576 PTS system, mannose / fructose / sorbose-type IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D CDIF630_00410 PTS system, mannose-type IIA component K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203]
D CDIF630_00411 PTS system, mannose-type IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D CDIF630_00621 PTS system, ribitol-specific IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D CDIF630_00412 PTS system, mannose-type IIC component K17466 dgaC; D-glucosaminate PTS system EIIC component
D CDIF630_00622 PTS system, ribitol-specific IIC component K17466 dgaC; D-glucosaminate PTS system EIIC component
D CDIF630_00413 PTS system, mannose-type IID component K17467 dgaD; D-glucosaminate PTS system EIID component
D CDIF630_00885 srlB; PTS system, sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CDIF630_02656 PTS system, sorbitol-like IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CDIF630_00883 srlEa; PTS system, sorbitol-specific IIB N-terminal component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_00884 srlEb; PTS system, sorbitol-specific IIB C-terminal component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_02659 PTS system, sorbitol-like IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_00882 srlA; PTS system, sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CDIF630_02660 PTS system, sorbitol-like IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CDIF630_00103 PTS system, galactitol-type IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_02565 PTS system, arabitol / xylitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_02517 PTS system, fructose / mannitol family IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_00104 PTS system, galactitol-type IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_01227 PTS system, galactiol-type IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_02564 PTS system, arabitol / xylitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_02516 PTS system, fructose / mannitol family IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_00105 PTS system, galactitol-type IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_02515 PTS system, fructose / mannitol family IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_02563 PTS system, arabitol / xylitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_03953 PTS system, fructose / mannitol-family IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CDIF630_02806 PTS system, fructose / mannitol-family IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CDIF630_03952 PTS system, fructose / mannitol-family IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CDIF630_02804 PTS system, fructose / mannitol family IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CDIF630_02821 PTS system, mannosylglycerate-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_03298 PTS system, mannose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_03419 PTS system, fructose-like IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_02503 fruABC; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_02820 PTS system, mannosylglycerate-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D CDIF630_03299 PTS system, mannose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D CDIF630_00328 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02819 PTS system, mannosylglycerate-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02735 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_03300 PTS system, mannose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_03417 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02504 fruK; fructose 1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:pdc03070]
D CDIF630_02542 putative pilin protein K02456 gspG; general secretion pathway protein G
D CDIF630_00124 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D CDIF630_03461 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CDIF630_00159 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D CDIF630_03066 preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D CDIF630_04008 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CDIF630_00260 secA1; protein translocase subunit SecA1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_03055 secA2; protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_01403 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CDIF630_01405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CDIF630_01259 putative conjugative transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CDIF630_00539 putative conjugative transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CDIF630_02051 putative conjugative transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pdc02020]
D CDIF630_02891 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CDIF630_02892 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CDIF630_00938 two-component response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CDIF630_03568 pstS; ABC-type transport system, phosphate extracellular solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CDIF630_00361 fliC; flagellin C K02406 fliC; flagellin
D CDIF630_00390 fliA; RNA polymerase sigma-28factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CDIF630_00380 motA; flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CDIF630_00861 putative MotA / TolQ / ExbB proton channel K02556 motA; chemotaxis protein MotA
D CDIF630_00632 two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CDIF630_02031 kdpD; two-component sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CDIF630_00633 two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CDIF630_02032 kdpE; two-component response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CDIF630_01764 kdpA; potassium-translocating ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CDIF630_01765 kdpB; potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CDIF630_01766 kdpC; potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CDIF630_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CDIF630_02162 two-component response regulator K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D CDIF630_01700 ABC-type transport system, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CDIF630_03339 ABC-type transport system, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CDIF630_03338 ABC-type transport system, permease K11632 bceB; bacitracin transport system permease protein
D CDIF630_01701 ABC-type transport system, permease K11632 bceB; bacitracin transport system permease protein
D CDIF630_01698 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CDIF630_03336 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CDIF630_03337 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CDIF630_01699 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CDIF630_03120 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CDIF630_03119 dltB; D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D CDIF630_03118 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CDIF630_03122 dltD; putative D-alanine transferase DltD K03740 dltD; D-alanine transfer protein
D CDIF630_03271 graS; two-component sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CDIF630_01707 ABC-type transport system, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CDIF630_03269 ABC-type transport system, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CDIF630_01708 ABC-type transport system, permease protein K11636 yxdM; putative ABC transport system permease protein
D CDIF630_03268 ABC-type transport system, permease K11636 yxdM; putative ABC transport system permease protein
D CDIF630_01874 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CDIF630_01873 two-component response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CDIF630_02338 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_01802 vanS; two-component sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_02339 two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_02079 vncR; two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_01801 vanR; two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_02824 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_03923 vanY3; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_02753 vanY2; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_01803 vanG; D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D CDIF630_01804 vanY1; D-alanyl-D-alanine carboxypeptidase, VanY-like K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CDIF630_01805 vanTG; alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D CDIF630_00610 spaK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_01508 cprK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00613 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00614 two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_03622 cprR; two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_00609 spaR; two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_03566 two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_00280 ABC-type transport system, multidrug-family K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CDIF630_00606 spaF; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_01505 cprA; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_00607 spaE; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_01506 cprB; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_00608 spaG; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_01507 cprC; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_01363 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CDIF630_01141 ytsJ; malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CDIF630_01790 ABC-type transport system, ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CDIF630_01791 ABC-type transport system, permease K09696 natB; sodium transport system permease protein
D CDIF630_03013 agrB; accessory gene regulator K07813 agrB; accessory gene regulator B
D CDIF630_02857 cdtR; binary toxin regulator, LytTR family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CDIF630_00356 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D CDIF630_01499 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CDIF630_01930 two-component response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CDIF630_02931 ctfA; butyrate--acetoacetate CoA-transferase, subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_02932 ctfB; butyrate--acetoacetate CoA-transferase, subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03468 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CDIF630_03594 putative type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D CDIF630_03821 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D CDIF630_00654 cheR; methyl-accepting chemotaxis proteins methyltransferase, MCP family K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CDIF630_00651 putative methyl-accepting chemotaxis receptor, MCP family K03406 mcp; methyl-accepting chemotaxis protein
D CDIF630_00649 cheW1; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CDIF630_00653 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CDIF630_00652 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CDIF630_00646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CDIF630_00655 cheB; putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CDIF630_02467 transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CDIF630_00671 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CDIF630_03105 two-component response regulator K07720 yesN; two-component system, response regulator YesN
D CDIF630_01169 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CDIF630_02798 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CDIF630_00351 flgM; negative regulator of flagellin synthesis (anti-sigma-d factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pdc02024]
D CDIF630_03920 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CDIF630_02179 hfq; Hfq-like RNA chaperone K03666 hfq; host factor-I protein
D CDIF630_00633 two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CDIF630_02032 kdpE; two-component response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CDIF630_02865 putative amino acid permease K20265 gadC; glutamate:GABA antiporter
D CDIF630_02467 transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CDIF630_01885 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CDIF630_01577 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CDIF630_03013 agrB; accessory gene regulator K07813 agrB; accessory gene regulator B
D CDIF630_02857 cdtR; binary toxin regulator, LytTR family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CDIF630_00773 toxB; toxin B K11063 tcdAB; toxin A/B
D CDIF630_01874 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CDIF630_01873 two-component response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CDIF630_02926 appA; ABC-type transport system, oligopeptide-family solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CDIF630_00974 oppA; ABC-type transport system, oligopeptide-family extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CDIF630_00972 oppB; ABC-type transport system, oligopeptide-family permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CDIF630_02927 appB; ABC-type transport system, oligopeptide-family permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CDIF630_02928 appC; ABC-type transport system, oligopeptide-family permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CDIF630_00973 oppC; ABC-type transport system, oligopeptide-family permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CDIF630_02925 appD; ABC-type transport system, ATP-binding protein, putative oligopeptide transport system K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CDIF630_00975 oppD; ABC-type transport system, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CDIF630_02924 appF; ABC-type transport system, ATP-binding protein, putative oligopeptide transport system K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CDIF630_04008 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CDIF630_00124 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D CDIF630_03461 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CDIF630_00159 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D CDIF630_03066 preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D CDIF630_00260 secA1; protein translocase subunit SecA1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_03055 secA2; protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_01403 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CDIF630_01405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CDIF630_01363 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CDIF630_00280 ABC-type transport system, multidrug-family K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CDIF630_00610 spaK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_01508 cprK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00613 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00614 two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_03622 cprR; two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_00609 spaR; two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_03566 two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_00606 spaF; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_01505 cprA; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_00607 spaE; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_01506 cprB; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_00608 spaG; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_01507 cprC; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pdc02030]
D CDIF630_00651 putative methyl-accepting chemotaxis receptor, MCP family K03406 mcp; methyl-accepting chemotaxis protein
D CDIF630_00425 rbsB1; ABC-type transport system, ribose-specific extracellular solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CDIF630_01761 rbsB2; ABC-type transport system, ribose-specific extracellular solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CDIF630_00652 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CDIF630_00649 cheW1; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CDIF630_00653 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CDIF630_00646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CDIF630_00647 cheC; chemotaxis protein CheY-P phosphatase CheC K03410 cheC; chemotaxis protein CheC
D CDIF630_00655 cheB; putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CDIF630_00648 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CDIF630_00654 cheR; methyl-accepting chemotaxis proteins methyltransferase, MCP family K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CDIF630_00372 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CDIF630_00394 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CDIF630_00395 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00350 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00380 motA; flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CDIF630_00861 putative MotA / TolQ / ExbB proton channel K02556 motA; chemotaxis protein MotA
D CDIF630_00381 motB; flagellar motor rotation protein MotB (chemotaxis protein MotB) K02557 motB; chemotaxis protein MotB
D CDIF630_00862 putative OmpA / MotB proton channel K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pdc02040]
D CDIF630_00370 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CDIF630_00371 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CDIF630_00372 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CDIF630_00373 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CDIF630_00374 fliI; ATP synthase subunit beta FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CDIF630_00375 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D CDIF630_00376 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CDIF630_00382 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CDIF630_00394 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CDIF630_00395 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00350 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00383 fliZ; flagellar protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D CDIF630_00384 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CDIF630_00385 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CDIF630_00387 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CDIF630_00386 flhB; bifunctional flagellar biosynthesis protein FliR / FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CDIF630_00368 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CDIF630_00369 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CDIF630_00377 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CDIF630_00378 flgE; flagellar hook protein FlgE (Distal rod protein) K02390 flgE; flagellar hook protein FlgE
D CDIF630_00392 flgG1; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D CDIF630_00393 flgG2; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CDIF630_00353 flgK; flagellar hook-associated protein FlgK (or HAP1) K02396 flgK; flagellar hook-associated protein 1
D CDIF630_00354 flgL; flagellar hook-associated protein FlgL (or HAP3) K02397 flgL; flagellar hook-associated protein 3 FlgL
D CDIF630_00361 fliC; flagellin C K02406 fliC; flagellin
D CDIF630_00359 fliD; flagellar hook-associated protein 2 FliD (or HAP2) K02407 fliD; flagellar hook-associated protein 2
D CDIF630_00357 fliS1; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CDIF630_00358 fliS2; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CDIF630_00380 motA; flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CDIF630_00861 putative MotA / TolQ / ExbB proton channel K02556 motA; chemotaxis protein MotA
D CDIF630_00381 motB; flagellar motor rotation protein MotB (chemotaxis protein MotB) K02557 motB; chemotaxis protein MotB
D CDIF630_00862 putative OmpA / MotB proton channel K02557 motB; chemotaxis protein MotB
D CDIF630_00351 flgM; negative regulator of flagellin synthesis (anti-sigma-d factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
D CDIF630_01663 sigA2; RNA polymerase sigma factor SigA2 (sigma-43) K03086 rpoD; RNA polymerase primary sigma factor
D CDIF630_01619 sigA1; RNA polymerase sigma factor SigA1 (sigma-43) K03086 rpoD; RNA polymerase primary sigma factor
D CDIF630_03468 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CDIF630_00390 fliA; RNA polymerase sigma-28factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CDIF630_03462 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CDIF630_03918 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pdc01501]
D CDIF630_00598 blaR; regulatory protein BlaR K02172 blaR1; bla regulator protein blaR1
D CDIF630_00661 putative penicillin-binding peptidase BlaR1-like, M56 family K02172 blaR1; bla regulator protein blaR1
D CDIF630_00303 putative membrane-associated metalloprotease, M56 family K02172 blaR1; bla regulator protein blaR1
D CDIF630_00586 uncharacterized protein, beta-lactamase / transpeptidase-like K02172 blaR1; bla regulator protein blaR1
D CDIF630_02630 putative beta-lactams signal-transducer K02172 blaR1; bla regulator protein blaR1
D CDIF630_00599 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00660 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00785 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_01114 transcriptional regulator, beta-lactams repressor phage-type K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_01390 transcriptional regulator, beta-lactam repressor phage-type K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02010 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02525 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02540 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02288 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02631 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02766 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00771 cdu1; transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02377 rtcB; putative RNA-splicing ligase K18148 rtcB; release factor H-coupled RctB family protein
D CDIF630_00899 putative penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CDIF630_01295 putative penicillin-binding protein with a N-terminal TonB-box K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CDIF630_01378 uncharacterized protein, beta-lactamase / transpeptidase-like K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pdc01502]
D CDIF630_02338 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_01802 vanS; two-component sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_02339 two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_02079 vncR; two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_01801 vanR; two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_02824 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_01569 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CDIF630_03774 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CDIF630_02909 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CDIF630_02908 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CDIF630_02905 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CDIF630_01804 vanY1; D-alanyl-D-alanine carboxypeptidase, VanY-like K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CDIF630_01803 vanG; D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D CDIF630_03923 vanY3; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_02753 vanY2; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_01805 vanTG; alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pdc01503]
D CDIF630_00176 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase, autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_00902 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_01106 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03164 putative cell wall hydrolase / autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03047 cwp6; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_02103 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03024 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_02416 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03120 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CDIF630_03119 dltB; D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D CDIF630_03118 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CDIF630_03122 dltD; putative D-alanine transferase DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pdc01000]
C 01001 Protein kinases [BR:pdc01001]
D CDIF630_02831 stk; putative serine / threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CDIF630_00010 rsbW; serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CDIF630_02891 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CDIF630_00632 two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CDIF630_02031 kdpD; two-component sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CDIF630_01698 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CDIF630_03336 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CDIF630_03271 graS; two-component sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CDIF630_01874 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CDIF630_02338 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_01802 vanS; two-component sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_00610 spaK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_01508 cprK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00613 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_02856 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CDIF630_00652 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CDIF630_02115 eutW; two-component sensor histidine kinase, ethanolamine specific K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pdc01009]
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_00397 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CDIF630_02832 stp; putative serine / threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CDIF630_00363 phosphothreonine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pdc01002]
D CDIF630_02107 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CDIF630_02851 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CDIF630_03817 putative type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CDIF630_02716 gpr; spore endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D CDIF630_02898 spoIIGA; sporulation sigma-E factor processing peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CDIF630_01861 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CDIF630_00320 guaA; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CDIF630_01337 uncharacterized protein, glutamine amidotransferase-like K07010 K07010; putative glutamine amidotransferase
D CDIF630_03376 uncharacterized protein, class I glutamine amidotransferase-like K07010 K07010; putative glutamine amidotransferase
D CDIF630_00304 putative NLPC / P60-type endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CDIF630_00342 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CDIF630_00236 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CDIF630_01809 asnB2; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CDIF630_00519 asnB1; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CDIF630_03657 putative protease / amidase K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CDIF630_02977 putative peptidase C60B, sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D CDIF630_03013 agrB; accessory gene regulator K07813 agrB; accessory gene regulator B
D CDIF630_00275 putative membrane-membrane-associated CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D CDIF630_03569 putative oligoendopeptidase f, M3B family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CDIF630_03802 putative oligoendopeptidase f, peptidase M3B family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CDIF630_03923 vanY3; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_02753 vanY2; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_01804 vanY1; D-alanyl-D-alanine carboxypeptidase, VanY-like K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CDIF630_01454 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CDIF630_03890 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_01823 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_03130 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_03087 putative glutamate carboxypeptidase, M20 family K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CDIF630_00415 putative peptidase, M20A family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CDIF630_00257 peptidase M20A, peptidase V-related K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CDIF630_02177 peptidase M20A, peptidase V-related K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CDIF630_03835 pepT2; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CDIF630_01186 pepT1; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CDIF630_00637 yqjE; putative peptidase YqjE K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CDIF630_00823 pepD; cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CDIF630_00430 putative AbgB-like amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D CDIF630_00968 putative AbgB-like amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D CDIF630_03397 putative amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D CDIF630_02953 putative peptidase, M20D family K14665 amhX; amidohydrolase [EC:3.5.1.-]
D CDIF630_03516 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D CDIF630_02248 N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CDIF630_00161 map1; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CDIF630_01770 map2; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CDIF630_02586 pepQ1; xaa-pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CDIF630_03753 putative peptidase, M24 family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CDIF630_02495 ampP; xaa-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CDIF630_02732 pepQ2; xaa-pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CDIF630_03917 aminopeptidase 2 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CDIF630_03094 uncharacterized protein K20109 zmp1; Pro-Pro endopeptidase [EC:3.4.24.89]
D CDIF630_03879 ftsH2; cell division protease FtsH2 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CDIF630_00797 putative ATP-dependent peptidase, M41 family K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CDIF630_02030 ftsH1; cell division protease FtsH1 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CDIF630_02383 deblocking aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CDIF630_02360 putative membrane-associated peptidase, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CDIF630_01556 putative amino acid amidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D CDIF630_00598 blaR; regulatory protein BlaR K02172 blaR1; bla regulator protein blaR1
D CDIF630_00661 putative penicillin-binding peptidase BlaR1-like, M56 family K02172 blaR1; bla regulator protein blaR1
D CDIF630_00303 putative membrane-associated metalloprotease, M56 family K02172 blaR1; bla regulator protein blaR1
D CDIF630_00586 uncharacterized protein, beta-lactamase / transpeptidase-like K02172 blaR1; bla regulator protein blaR1
D CDIF630_02630 putative beta-lactams signal-transducer K02172 blaR1; bla regulator protein blaR1
D CDIF630_00665 prsW; protease PrsW K24131 prsW; protease PrsW [EC:3.4.-.-]
D CDIF630_02218 isp; intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D CDIF630_01445 dacF2; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_00627 dacF1; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_02745 dacF4; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_03606 clpP1; ATP-dependent clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CDIF630_03651 clpP2; ATP-dependent clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CDIF630_03602 lon; ATP-dependent protease Lon K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CDIF630_02135 lexA; transcriptional regulator, LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CDIF630_01487 spsB3; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CDIF630_00667 spsB1; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CDIF630_00668 spsB2; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CDIF630_03325 pepI; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CDIF630_03766 ctpB; putative carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CDIF630_01362 spoIVB1; stage IV sporulation protein b, S55 peptidase family K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CDIF630_01559 putative muramoyltetrapeptide carboxypeptidase, S66 family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CDIF630_01702 cephalosporin acylase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CDIF630_00818 putative peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CDIF630_01377 yrrO; putative protease YrrO K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CDIF630_03134 putative modulator of DNA gyrase, peptidase U62 K03592 pmbA; PmbA protein
D CDIF630_03135 tldD; metalloprotease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:pdc01003]
D CDIF630_00034 ugtP1; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CDIF630_01500 ugtP2; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CDIF630_01004 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CDIF630_00899 putative penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CDIF630_01367 putative glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pdc01005]
D CDIF630_03312 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CDIF630_01367 putative glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pdc01011]
D CDIF630_00239 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CDIF630_03707 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CDIF630_03832 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CDIF630_02907 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CDIF630_02918 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CDIF630_01569 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CDIF630_03774 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CDIF630_03882 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CDIF630_01559 putative muramoyltetrapeptide carboxypeptidase, S66 family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CDIF630_02908 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CDIF630_02905 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CDIF630_01488 uppP1; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CDIF630_03270 uppP2; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CDIF630_01666 putative membrane protein (virulence factor (mvin)) K03980 murJ; putative peptidoglycan lipid II flippase
D CDIF630_03044 mviN; transmembrane virulence factor / flippase K03980 murJ; putative peptidoglycan lipid II flippase
D CDIF630_00899 putative penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CDIF630_01295 putative penicillin-binding protein with a N-terminal TonB-box K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CDIF630_01378 uncharacterized protein, beta-lactamase / transpeptidase-like K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CDIF630_02910 spoVD; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CDIF630_01445 dacF2; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_00627 dacF1; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_02745 dacF4; serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CDIF630_03923 vanY3; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_02753 vanY2; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_01804 vanY1; D-alanyl-D-alanine carboxypeptidase, VanY-like K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CDIF630_00304 putative NLPC / P60-type endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CDIF630_02977 putative peptidase C60B, sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D CDIF630_01277 putative lytic transglycosylase-like protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CDIF630_01375 uncharacterized protein, YceG-like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CDIF630_00240 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CDIF630_00176 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase, autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_00902 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_01106 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03164 putative cell wall hydrolase / autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03047 cwp6; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_02103 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03024 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_02416 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pdc01004]
D CDIF630_01330 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CDIF630_01328 fabH; beta-ketoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CDIF630_01333 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CDIF630_01331 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_02830 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CDIF630_00244 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CDIF630_01329 fabK; enoyl-[acyl-carrier-protein] reductase (NADH) K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CDIF630_01745 putative esterase, SGNH hydrolase-type K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CDIF630_02428 putative acetate--CoA ligase (ADP-forming) K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CDIF630_01327 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CDIF630_02885 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CDIF630_02017 plsC2; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CDIF630_01912 plsC1; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pdc01008]
D CDIF630_01416 putative (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CDIF630_02628 alpha-hydroxy acid dehydrogenase, FMN-dependent K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:pdc01006]
D CDIF630_01354 ispA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CDIF630_02366 uppS1; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CDIF630_03025 uppS2; putative undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CDIF630_02180 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:pdc01007]
D CDIF630_02282 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CDIF630_00114 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CDIF630_01689 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CDIF630_02862 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CDIF630_00116 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CDIF630_00826 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CDIF630_03854 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CDIF630_02871 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CDIF630_03553 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CDIF630_02772 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CDIF630_03872 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CDIF630_03002 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CDIF630_02478 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CDIF630_03003 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CDIF630_02676 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CDIF630_02675 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CDIF630_00024 serS1; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CDIF630_03107 serS2; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CDIF630_00113 proS2; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CDIF630_00112 proS1; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CDIF630_00687 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CDIF630_01436 alaS; alanine-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CDIF630_02394 putative threonyl / alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CDIF630_00814 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CDIF630_00815 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CDIF630_00203 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_01495 putative alanine aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_03092 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CDIF630_02622 aromatic-amino-acid aminotransferase, tyrB-like K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CDIF630_01718 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02433 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CDIF630_02995 putative pyridoxal phosphate-dependent transferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02952 patB2; putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03752 patB3; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02731 patB1; putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_03313 malY; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CDIF630_02252 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CDIF630_02389 isoleucine 2-epimerase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CDIF630_03116 phnXW; bifunctional phosphonoacetaldehyde hydrolase / aminoethylphosphonate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CDIF630_00856 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pdc00194]
D CDIF630_03778 atpC2; ATP hydrolase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CDIF630_03779 atpD2; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CDIF630_03780 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CDIF630_03781 atpA2; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CDIF630_03782 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CDIF630_03783 atpF2; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CDIF630_03784 atpE2; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CDIF630_03785 atpB2; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pdc03000]
D CDIF630_01052 putative phage C-5 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03432 putative DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03486 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D CDIF630_01271 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CDIF630_02088 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CDIF630_02052 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CDIF630_02661 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CDIF630_03508 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CDIF630_02999 transcriptional regulator, LysR family K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D CDIF630_02157 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CDIF630_00310 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CDIF630_02336 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CDIF630_00859 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CDIF630_03117 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CDIF630_00242 spoIIID; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CDIF630_02654 putative transcriptional repressor ccpn K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CDIF630_00423 rbsR; transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CDIF630_01207 ccpA; transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CDIF630_02003 scrR; transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D CDIF630_03373 treR; transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CDIF630_01145 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CDIF630_03763 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CDIF630_01217 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D CDIF630_03153 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D CDIF630_01317 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CDIF630_03653 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CDIF630_03859 transcriptional regulator, AsnC / lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CDIF630_03658 dimeric alpha-beta barrel protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CDIF630_03111 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D CDIF630_02441 transcriptional regulator, MarR family K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D CDIF630_01453 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CDIF630_02029 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CDIF630_00971 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CDIF630_03904 transcriptional regulator, MerR family K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene
D CDIF630_03482 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D CDIF630_01441 fur; transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CDIF630_00945 perR; peroxide-responsive repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CDIF630_02673 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CDIF630_03290 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CDIF630_02467 transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CDIF630_00741 transcriptional regulator, crp family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CDIF630_01431 iscR; transcriptional regulator of cysteine biosynthesis K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CDIF630_00437 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CDIF630_02211 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D CDIF630_01266 transcriptional regulator, RmlC-type K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CDIF630_00480 transcriptional regulator, RmlC-type K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CDIF630_01501 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CDIF630_01301 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CDIF630_03345 transcriptional regulator, RpiR family K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D CDIF630_00599 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00660 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00785 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_01114 transcriptional regulator, beta-lactams repressor phage-type K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_01390 transcriptional regulator, beta-lactam repressor phage-type K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02010 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02525 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02540 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02288 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02631 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02766 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00771 cdu1; transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_03878 birA; bifunctional ligase / repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CDIF630_02623 transcriptional regulator, sigma-54-dependent K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D CDIF630_03318 transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CDIF630_03831 purR; transcriptional regulator, purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CDIF630_03580 transcription antiterminator, PTS operon regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D CDIF630_01335 transcriptional regulator, sigma-54-dependent K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CDIF630_03377 transcriptional regulator, sigma-54-dependent K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CDIF630_03529 putative sigma-54 interacting protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CDIF630_00569 transcriptional regulator, sigma-54-dependent K06714 rocR; arginine utilization regulatory protein
D CDIF630_00292 rex; transcriptional regulator, redox-sensing repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CDIF630_01428 codY; transcriptional regulator, GTP-sensing pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor
D CDIF630_02106 transcriptional regulator, phage-type K07726 K07726; putative transcriptional regulator
D CDIF630_02267 transcriptional regulator, HTH-type K07727 K07727; putative transcriptional regulator
D CDIF630_02362 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D CDIF630_00497 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_01272 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_01517 transcriptional regulator, phage-type K07729 K07729; putative transcriptional regulator
D CDIF630_00555 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_02526 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_03438 transcriptional regulator, phage-type K07729 K07729; putative transcriptional regulator
D CDIF630_01951 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_02545 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_03424 transcriptional regulator, phage-type K07729 K07729; putative transcriptional regulator
D CDIF630_00754 transcriptional regulator, HTH-type K07729 K07729; putative transcriptional regulator
D CDIF630_03773 ndoAI; antitoxin EndoAI K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CDIF630_00517 bglG; transcription antiterminator, PTS operon regulator K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_03381 bglG1; transcription antiterminator, PTS operon regulator, bglG1 K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_03411 bglG3; transcription antiterminator, PTS operon regulator, bglG3 K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_03423 bglG4; transcription antiterminator, PTS operon regulator, bglG4 K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_02922 transcription antiterminator, licT family K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_03315 transcription antiterminator, PTS operon regulator K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_00937 transcription antiterminator, PTS operon regulator K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_02760 transcription antiterminator, PTS operon regulator K03488 licT; beta-glucoside operon transcriptional antiterminator
D CDIF630_02572 mtlR; transcription antiterminator, PTS operon regulator K03483 mtlR; mannitol operon transcriptional activator
D CDIF630_00880 srlR; transcription antiterminator, PTS operon regulator K03491 licR; probable licABCH operon transcriptional regulator
D CDIF630_03366 transcription antiterminator, PTS operon regulator K03491 licR; probable licABCH operon transcriptional regulator
D CDIF630_02818 transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D CDIF630_02992 csoR; copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CDIF630_03812 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CDIF630_04000 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CDIF630_04002 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CDIF630_01418 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CDIF630_02426 putative ROK protein K15545 mlc; transcriptional regulator of PTS gene
D CDIF630_02709 hrcA; transcriptional regulator, heat-inducible repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CDIF630_00085 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CDIF630_03467 cggR; transcriptional regulator, SorC family K05311 cggR; central glycolytic genes regulator
D CDIF630_00097 transcriptional regulator with putative sugar-binding domain K05346 deoR; deoxyribonucleoside regulator
D CDIF630_02849 pyrR; bifunctional uracil phosphoribosyltransferase / regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CDIF630_02894 nrdR; transcriptional regulator, repressor NrdR family K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:pdc03021]
D CDIF630_00168 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CDIF630_00132 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CDIF630_00133 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CDIF630_02841 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CDIF630_01663 sigA2; RNA polymerase sigma factor SigA2 (sigma-43) K03086 rpoD; RNA polymerase primary sigma factor
D CDIF630_01619 sigA1; RNA polymerase sigma factor SigA1 (sigma-43) K03086 rpoD; RNA polymerase primary sigma factor
D CDIF630_02092 csfU; extracytoplasmic function (ECF) sigma factor csfU K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CDIF630_01727 csfV; extracytoplasmic function (ECF) sigma factor csfV K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CDIF630_00791 csfT; extracytoplasmic function (ECF) sigma factor csfT K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CDIF630_00011 sigB; RNA polymerase sigma-B factor (sigma-37) K03090 sigB; RNA polymerase sigma-B factor
D CDIF630_00890 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CDIF630_01393 RNA polymerase sigma-70 factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CDIF630_02896 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CDIF630_02897 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CDIF630_00121 sigH; RNA polymerase factor sigma-70 K27000 sigH; RNA polymerase sigma-H factor
D CDIF630_03468 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CDIF630_00390 fliA; RNA polymerase sigma-28factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CDIF630_01462 nusA; transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D CDIF630_01350 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CDIF630_00125 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CDIF630_00009 rsbV; anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D CDIF630_00010 rsbW; serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CDIF630_02991 putative regulator of the sigma(E) factor K03803 rseC; sigma-E factor negative regulatory protein RseC
D CDIF630_03873 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D CDIF630_03799 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pdc03019]
D CDIF630_01307 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CDIF630_01400 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CDIF630_01443 ribonuclease J family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CDIF630_01485 RNase Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CDIF630_03455 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CDIF630_00879 cshA1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_02415 dbpA; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_00950 cshA2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_01887 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CDIF630_03462 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CDIF630_01474 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CDIF630_03799 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CDIF630_03700 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CDIF630_02707 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CDIF630_00315 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CDIF630_02179 hfq; Hfq-like RNA chaperone K03666 hfq; host factor-I protein
D CDIF630_00356 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D CDIF630_03705 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:pdc03011]
D CDIF630_01121 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CDIF630_02371 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CDIF630_00145 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CDIF630_00167 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CDIF630_00156 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CDIF630_03992 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CDIF630_00135 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CDIF630_00153 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CDIF630_00175 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CDIF630_00138 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CDIF630_00166 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CDIF630_00134 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CDIF630_00165 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CDIF630_00152 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D CDIF630_01472 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CDIF630_01406 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CDIF630_00148 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CDIF630_03990 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CDIF630_00143 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CDIF630_02719 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CDIF630_02691 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CDIF630_00127 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CDIF630_00142 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CDIF630_00139 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CDIF630_00140 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CDIF630_00151 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CDIF630_00154 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CDIF630_03986 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CDIF630_00129 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CDIF630_00126 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CDIF630_00130 rplL; 50S ribosomal protein L7 / L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CDIF630_00174 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CDIF630_00149 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CDIF630_00158 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CDIF630_00146 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CDIF630_00169 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CDIF630_00155 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CDIF630_01410 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CDIF630_00800 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CDIF630_01308 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CDIF630_00144 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CDIF630_00141 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CDIF630_00150 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CDIF630_01310 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CDIF630_02814 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CDIF630_00147 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CDIF630_00157 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CDIF630_03798 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CDIF630_01325 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CDIF630_00123 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CDIF630_04011 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CDIF630_00799 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CDIF630_00164 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CDIF630_00037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00202 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_03723 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_03868 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00441 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00215 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_01174 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00209 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00180 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00212 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00199 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00439 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_02980 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_03725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00177 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_03870 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00035 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_01171 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00206 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00214 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_03724 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00201 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00013 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00179 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00208 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00036 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_03869 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_02979 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_01172 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pdc03009]
D CDIF630_01400 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CDIF630_02681 era; GTP-binding protein Era K03595 era; GTPase
D CDIF630_01311 obgE; Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CDIF630_01462 nusA; transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D CDIF630_01350 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CDIF630_00125 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CDIF630_00533 putative RNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CDIF630_03837 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CDIF630_02834 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CDIF630_02810 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CDIF630_02694 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CDIF630_02912 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CDIF630_03861 rsmI; ribosomal RNA small subunit methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CDIF630_01357 yqxC; putative rRNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CDIF630_00119 putative tRNA / rRNA methyltransferase, TrmH family, group3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CDIF630_03973 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CDIF630_03902 putative methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CDIF630_02833 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CDIF630_03698 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CDIF630_00534 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CDIF630_02272 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CDIF630_03903 rluC; putative ribosomal large subunit pseudouridine synthase C K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CDIF630_01200 putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CDIF630_02850 putative pseudouridylate synthase, RluC / RluD family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CDIF630_02225 ermB1; ribosomal RNA adenine N-6-methyltransferase (erythromycin resistance protein) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CDIF630_02229 ermB2; ribosomal RNA adenine N-6-methyltransferase (erythromycin resistance protein) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CDIF630_00270 rimI; putative alanine acetyltransferase, ribosomal family K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CDIF630_03450 putative FemA-like peptidoglycan biosynthesis protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CDIF630_01408 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CDIF630_01482 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CDIF630_02695 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CDIF630_01307 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CDIF630_01439 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CDIF630_00117 mrnC; mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CDIF630_00879 cshA1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_02415 dbpA; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_00950 cshA2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CDIF630_03668 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CDIF630_02829 thiamin monophosphate phosphatase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CDIF630_02886 der; GTPase Der K03977 engA; GTPase
D CDIF630_01411 ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D CDIF630_00907 putative GTP-binding protein, HflX type K03665 hflX; GTPase
D CDIF630_02442 putative GTP-binding protein, HflX type K03665 hflX; GTPase
D CDIF630_03793 ywlC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CDIF630_03007 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CDIF630_01466 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CDIF630_01461 rimP; ribosome maturation factor rimp K09748 rimP; ribosome maturation factor RimP
D CDIF630_00003 putative RNA-binding mediating protein K14761 rlbA; ribosome-associated protein
D CDIF630_02774 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CDIF630_02684 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CDIF630_01312 rna-binding protein, yhby family K07574 yhbY; RNA-binding protein
D CDIF630_00259 putative RNA-binding protein K05808 hpf; ribosome hibernation promoting factor
D CDIF630_02688 putative ribosome-associated sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D CDIF630_02916 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D CDIF630_01324 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pdc03016]
D CDIF630_02791 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CDIF630_02712 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CDIF630_00113 proS2; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CDIF630_00112 proS1; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CDIF630_02871 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CDIF630_02772 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CDIF630_03854 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CDIF630_02282 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CDIF630_00826 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CDIF630_03872 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CDIF630_03002 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CDIF630_01436 alaS; alanine-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CDIF630_02394 putative threonyl / alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CDIF630_02478 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CDIF630_00687 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CDIF630_00024 serS1; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CDIF630_03107 serS2; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CDIF630_00116 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CDIF630_03553 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CDIF630_03003 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CDIF630_00814 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CDIF630_00815 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CDIF630_01689 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CDIF630_02862 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CDIF630_03006 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CDIF630_02692 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CDIF630_02147 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CDIF630_01557 TsaA-like protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D CDIF630_00173 truA1; transfer RNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CDIF630_01982 truA2; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CDIF630_01470 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CDIF630_01432 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_00871 iscS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_03793 ywlC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CDIF630_02180 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CDIF630_04006 mnmE; transfer RNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CDIF630_04005 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CDIF630_02743 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CDIF630_04010 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CDIF630_02976 RNaseP_bact_a K01978 rnpB; M1 RNA
D CDIF630_03609 rph; bifunctional tRNA nucleotidyltransferase / nucleoside-triphosphate diphosphatase K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CDIF630_02676 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CDIF630_02675 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CDIF630_00114 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D CDIF630_01138 cys-tRNA(Pro) / cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CDIF630_03765 putative nucleotide-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CDIF630_02098 proX; prolyl-tRNA editing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CDIF630_02174 putative oligonucleotide binding regulator K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CDIF630_00025 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CDIF630_03874 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CDIF630_02195 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CDIF630_02693 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CDIF630_01409 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CDIF630_01620 putative SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CDIF630_00679 trmL; putative tRNA (cytidine(34)-2'-o)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CDIF630_00812 putative tRNA / rRNA methyltransferase, SpoU K03437 spoU; RNA methyltransferase, TrmH family
D CDIF630_01434 mnmA; transfer RNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CDIF630_03924 ttcA2; putative 2-thiocytidine tRNA biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CDIF630_03069 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CDIF630_00676 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CDIF630_01481 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CDIF630_03067 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CDIF630_00872 thiI; sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CDIF630_03880 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CDIF630_00269 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CDIF630_00271 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CDIF630_00268 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CDIF630_02725 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CDIF630_01322 uncharacterized protein, rossmann-like fold K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CDIF630_03455 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CDIF630_01474 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pdc03012]
D CDIF630_01465 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CDIF630_00798 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CDIF630_00291 ABC-type transport system, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CDIF630_02370 tsf; elongation factor ts (EF-ts) K02357 tsf; elongation factor Ts
D CDIF630_00122 tuf1; elongation factor EFTu / EF1A K02358 tuf; elongation factor Tu
D CDIF630_00137 tuf2; elongation factor EFTu / EF1A K02358 tuf; elongation factor Tu
D CDIF630_00084 fusA1; elongation factor G (EF-g) K02355 fusA; elongation factor G
D CDIF630_00136 fusA2; elongation factor G (EF-g) K02355 fusA; elongation factor G
D CDIF630_02741 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D CDIF630_03795 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CDIF630_02368 rrf; ribosome-recycling factor K02838 frr; ribosome recycling factor
D CDIF630_03796 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CDIF630_03815 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CDIF630_00163 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CDIF630_01398 efp; elongation factor P (EF-p) K02356 efp; elongation factor P
D CDIF630_00262 prfB; peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:pdc03110]
D CDIF630_02241 clpB; chaperone protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CDIF630_00088 clpC; class III stress response-related ATPase, AAA+ superfamily K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CDIF630_03605 clpX; ATP-dependent clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CDIF630_00397 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CDIF630_02707 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CDIF630_00315 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CDIF630_02706 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CDIF630_03513 hslO; heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D CDIF630_02708 grpE; protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D CDIF630_00314 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CDIF630_03879 ftsH2; cell division protease FtsH2 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CDIF630_00797 putative ATP-dependent peptidase, M41 family K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CDIF630_02030 ftsH1; cell division protease FtsH1 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CDIF630_03785 atpB2; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CDIF630_02218 isp; intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D CDIF630_00459 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CDIF630_03813 prsA2; peptidyl-prolyl cis-trans isomerase, PpiC-type K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CDIF630_01513 putative peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CDIF630_01875 trxA1; thioredoxin K03671 TXN; thioredoxin
D CDIF630_02595 trxA2; thioredoxin K03671 TXN; thioredoxin
D CDIF630_03317 trxA3; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pdc04131]
D CDIF630_03466 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CDIF630_03699 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CDIF630_00397 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pdc03051]
D CDIF630_00397 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pdc03032]
D CDIF630_01052 putative phage C-5 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03432 putative DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03809 hupA; non-specific DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CDIF630_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CDIF630_03985 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CDIF630_00537 putative conjugative transposon protein K02315 dnaC; DNA replication protein DnaC
D CDIF630_03978 dnaI; helicase loader ATPase, DnaI K02315 dnaC; DNA replication protein DnaC
D CDIF630_01618 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CDIF630_03991 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03222 putative phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03701 dnaE; DNA polymerase III DnaE subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CDIF630_01460 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CDIF630_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CDIF630_02720 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CDIF630_03864 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CDIF630_02636 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CDIF630_00030 dnaX; DNA polymerase III subunit gamma / tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CDIF630_01415 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CDIF630_01275 polA; DNA polymerase I (POLI) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CDIF630_03610 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CDIF630_01061 putative phage D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CDIF630_00006 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CDIF630_00005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CDIF630_01427 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CDIF630_01251 DNA topoisomerase protein, type IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CDIF630_00549 DNA topoisomerase protein, type IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CDIF630_02509 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CDIF630_02646 DNA topoisomerase type IA K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pdc03036]
D CDIF630_01052 putative phage C-5 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03432 putative DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_01400 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CDIF630_03809 hupA; non-specific DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CDIF630_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CDIF630_02179 hfq; Hfq-like RNA chaperone K03666 hfq; host factor-I protein
D CDIF630_03859 transcriptional regulator, AsnC / lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CDIF630_03658 dimeric alpha-beta barrel protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CDIF630_01402 smc; structural maintenance chromosome protein SMC K03529 smc; chromosome segregation protein
D CDIF630_01449 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CDIF630_01450 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CDIF630_01480 ftsK; DNA FtsK / SpoIIIE translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CDIF630_02911 hypothetical protein K03586 ftsL; cell division protein FtsL
D CDIF630_02904 putative cell division protein fts-Q type K03589 ftsQ; cell division protein FtsQ
D CDIF630_02906 spoVE; cell division / stage V sporulation protein K03588 ftsW; cell division protein FtsW
D CDIF630_02900 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CDIF630_00816 putative cell-division protein K09888 zapA; cell division protein ZapA
D CDIF630_00176 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase, autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_00902 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_01106 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03164 putative cell wall hydrolase / autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03047 cwp6; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_02103 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_03024 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_02416 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CDIF630_01296 minC; cell division regulator (septum placement) K03610 minC; septum site-determining protein MinC
D CDIF630_01297 minD; septum site-determining protein MinD (cell division inhibitor MinD) K03609 minD; septum site-determining protein MinD
D CDIF630_01298 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D CDIF630_02873 putative cell-division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D CDIF630_02876 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CDIF630_00243 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CDIF630_01292 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CDIF630_01293 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CDIF630_01294 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CDIF630_01299 mrdB; rod shape-determining protein MrdB K05837 rodA; rod shape determining protein RodA
D CDIF630_04001 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CDIF630_04000 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CDIF630_04002 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CDIF630_04005 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CDIF630_01371 tyrosine recombinase, XerD-like K04763 xerD; integrase/recombinase XerD
D CDIF630_03810 yabN; bifunctional tetrapyrrole methylase / NTP pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CDIF630_03601 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein
D CDIF630_03702 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pdc03400]
D CDIF630_01967 ogt2; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CDIF630_00714 ogt1; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CDIF630_02728 ung; uracil-DNA glycosylase (UDG) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CDIF630_01658 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CDIF630_00312 putative 8-oxoguanine-DNA-glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CDIF630_00678 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CDIF630_00820 mutX; 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CDIF630_02645 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CDIF630_01497 exoA; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CDIF630_00673 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CDIF630_03009 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CDIF630_03610 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CDIF630_01275 polA; DNA polymerase I (POLI) K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CDIF630_03716 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CDIF630_03717 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CDIF630_03715 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CDIF630_00456 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_01178 putative helicase, superfamily 1, UvrD-family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00866 putative DNA helicase, UvrD / REP type K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00583 putative helicase, UvrD family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CDIF630_00132 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CDIF630_00133 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CDIF630_00168 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CDIF630_02841 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CDIF630_03814 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CDIF630_02182 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CDIF630_00824 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CDIF630_02376 DNA mismatch repair protein, MutS2-like K07456 mutS2; DNA mismatch repair protein MutS2
D CDIF630_02181 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CDIF630_01352 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CDIF630_01353 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CDIF630_03701 dnaE; DNA polymerase III DnaE subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CDIF630_01460 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CDIF630_00002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CDIF630_02720 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CDIF630_03864 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CDIF630_02636 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CDIF630_00030 dnaX; DNA polymerase III subunit gamma / tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CDIF630_03991 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03222 putative phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_01061 putative phage D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CDIF630_00249 yrrC; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CDIF630_01484 recA; protein RecA (Recombinase a) K03553 recA; recombination protein RecA
D CDIF630_03071 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CDIF630_03070 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CDIF630_03072 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CDIF630_02839 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CDIF630_01183 sbcC; nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D CDIF630_01182 sbcD; nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D CDIF630_00089 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D CDIF630_00004 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CDIF630_02811 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CDIF630_02678 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CDIF630_00032 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CDIF630_01358 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CDIF630_01181 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CDIF630_01180 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CDIF630_03260 putative CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1
D CDIF630_00006 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CDIF630_00005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CDIF630_01427 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CDIF630_03809 hupA; non-specific DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CDIF630_01887 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CDIF630_01019 dinB; DNA polymerase IV (Pol IV) K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CDIF630_02135 lexA; transcriptional regulator, LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CDIF630_02777 recX; regulatory protein RecX K03565 recX; regulatory protein
D CDIF630_01595 putative helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CDIF630_03279 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CDIF630_01414 nrdZ; vitamin B12-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CDIF630_03278 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pdc03029]
D CDIF630_01465 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CDIF630_00798 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CDIF630_02370 tsf; elongation factor ts (EF-ts) K02357 tsf; elongation factor Ts
D CDIF630_00122 tuf1; elongation factor EFTu / EF1A K02358 tuf; elongation factor Tu
D CDIF630_00137 tuf2; elongation factor EFTu / EF1A K02358 tuf; elongation factor Tu
D CDIF630_00084 fusA1; elongation factor G (EF-g) K02355 fusA; elongation factor G
D CDIF630_00136 fusA2; elongation factor G (EF-g) K02355 fusA; elongation factor G
D CDIF630_02681 era; GTP-binding protein Era K03595 era; GTPase
D CDIF630_01689 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CDIF630_02772 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CDIF630_03002 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CDIF630_00826 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CDIF630_03991 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_03222 putative phage single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CDIF630_02707 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CDIF630_02708 grpE; protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D CDIF630_00315 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CDIF630_00314 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CDIF630_02706 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CDIF630_01432 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_00871 iscS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_04008 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CDIF630_00397 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pdc02000]
D CDIF630_00560 ABC-type transport system, multidrug-family permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CDIF630_00561 ABC-type transport system, multidrug-family permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CDIF630_00280 ABC-type transport system, multidrug-family K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CDIF630_03083 ABC-type transport system, multidrug-family ATP-binding / permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01153 ABC-type transport system, multidrug-family ATP-binding protein / permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_02444 ABC-type transport system, multidrug-family ATP-binding / permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01636 ABC-type transport system, multidrug-family ATP-binding protein / permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_03082 ABC-type transport system, multidrug-family ATP-binding / permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01154 ABC-type transport system, multidrug-family ATP-binding protein / permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_02443 ABC-type transport system, multidrug-family ATP-binding / permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01637 ABC-type transport system, multidrug-family ATP-binding / permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CDIF630_01228 ywjA; ABC-type transport system, multidrug-family ATP-binding / permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CDIF630_02847 ABC-type transport system, pristinamycin / multidrug-family ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CDIF630_01566 ABC-type transport system, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CDIF630_00989 modA; ABC-type transport system, molybdenum-specific extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CDIF630_02549 ABC-type transport system, molybdenum-like extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CDIF630_00990 modB; ABC-type transport system, molybdenum-specific permease K02018 modB; molybdate transport system permease protein
D CDIF630_02550 ABC-type transport system, molybdenum-like permease K02018 modB; molybdate transport system permease protein
D CDIF630_00991 modC; ABC-type transport system, molybdenum-specific ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CDIF630_01648 ssuA1; ABC-type transport system, alkanesulfonates-family extracellular solute-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CDIF630_03273 ssuA2; ABC-type transport system, sulfonate-family extracellular solute-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CDIF630_01646 ssuC1; ABC-type transport system, sulfonates-family permease K15554 ssuC; sulfonate transport system permease protein
D CDIF630_03275 ssuC2; ABC-type transport system, sulfonate-family permease K15554 ssuC; sulfonate transport system permease protein
D CDIF630_01647 ssuB1; ABC-type transport system, sulfonates-family ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CDIF630_03274 ssuB2; ABC-type transport system, sulfonate-family ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CDIF630_03839 ABC-type transport system, iron-family extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CDIF630_03842 ABC-type transport system, iron-family extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CDIF630_03236 ABC-type transport system, iron-family extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CDIF630_03840 ABC-type transport system, iron-family permease K02011 afuB; iron(III) transport system permease protein
D CDIF630_03843 ABC-type transport system, iron-family permease K02011 afuB; iron(III) transport system permease protein
D CDIF630_03156 ABC-type transport system, iron-family permease K02011 afuB; iron(III) transport system permease protein
D CDIF630_03841 ABC-type transport system, iron-family ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CDIF630_03844 ABC-type transport system, iron-family ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CDIF630_03157 ABC-type transport system, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CDIF630_01163 potD; ABC-type transport system, spermidine / putrescine solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CDIF630_01162 potC; ABC-type transport system, spermidine / putrescine permease K11070 potC; spermidine/putrescine transport system permease protein
D CDIF630_01161 potB; ABC-type transport system, spermidine / putrescine permease K11071 potB; spermidine/putrescine transport system permease protein
D CDIF630_01160 potA; ABC-type transport system, spermidine / putrescine ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CDIF630_03510 ABC-type transport system, glycine betaine / carnitine / choline-like permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D CDIF630_01021 opuCC; ABC-type transport system, glycine betaine / carnitine / choline permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D CDIF630_01020 opuCA; ABC-type transport system, glycine betaine / carnitine / choline ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CDIF630_03509 ABC-type transport system, glycine betaine / carnitine / choline-like ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CDIF630_01135 ABC-type transport system, nitrate / sulfonate / taurine extracellular solute-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CDIF630_02086 putative solute-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CDIF630_02096 Uncharacterized protein, SsuA-like K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CDIF630_02605 ABC-type transport system, nitrate / sulfonate / taurine extracellular solute-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CDIF630_02184 ABC-type transport system, extracellular solute-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CDIF630_01136 ABC-type transport system, nitrate / sulfonate / taurine permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CDIF630_02108 ABC-type transport system, permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CDIF630_02602 ABC-type transport system, sulfonates-family permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CDIF630_02185 ABC-type transport system, permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CDIF630_01137 ABC-type transport system, nitrate / sulfonate / taurine ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CDIF630_02131 ABC-type transport system, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CDIF630_02601 ABC-type transport system, nitrate / sulfonate / taurine ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CDIF630_02183 ABC-type transport system, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CDIF630_02702 ABC-type transport system, sugar-family ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CDIF630_00425 rbsB1; ABC-type transport system, ribose-specific extracellular solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CDIF630_01761 rbsB2; ABC-type transport system, ribose-specific extracellular solute-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CDIF630_00427 rbsC2; ABC-type transport system, ribose-specific permease K10440 rbsC; ribose transport system permease protein
D CDIF630_01760 rbsC1; ABC-type transport system, ribose-specific permease K10440 rbsC; ribose transport system permease protein
D CDIF630_00426 rbsA1; ABC-type transport system, ribose-specific ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CDIF630_01759 rbsA2; ABC-type transport system, ribose-specific ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CDIF630_03719 ABC-type transport system, sn-glycerol-3-phosphate-specific extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CDIF630_03721 ABC-type transport system, sn-glycerol-3-phosphate-specific permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CDIF630_03720 ABC-type transport system, sn-glycerol-3-phosphate-specific permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CDIF630_03722 ABC-type transport system, sn-glycerol-3-phosphate-specific ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CDIF630_00681 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CDIF630_00682 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CDIF630_00864 putative lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CDIF630_02801 ABC-type transport system, sugar-family permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D CDIF630_02800 ABC-type transport system, sugar-family permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CDIF630_03568 pstS; ABC-type transport system, phosphate extracellular solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CDIF630_03561 pstC; ABC-type transport system, phosphate-specific permease K02037 pstC; phosphate transport system permease protein
D CDIF630_03560 pstA; ABC-type transport system, phosphate-specific permease K02038 pstA; phosphate transport system permease protein
D CDIF630_03559 pstB; ABC-type transport system, phosphate-specific ATP-binding K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CDIF630_00868 ABC-type transport system, aminoacid-family extracellular solute-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CDIF630_00869 ABC-type transport system, aminoacid-family permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D CDIF630_00870 ABC-type transport system, aminoacid-family ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CDIF630_01656 metQ; ABC-type transport system, methionine-specific substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CDIF630_01830 putative D-methionine-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D CDIF630_01655 metI; ABC-type transport system, methionine-specific permease K02072 metI; D-methionine transport system permease protein
D CDIF630_01654 metN; ABC-type transport system, methionine-specific ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CDIF630_00993 ABC-type transport system, sugar-family extracellular solute-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CDIF630_00996 ABC-type transport system, sugar-family extracellular solute-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CDIF630_00995 ABC-type transport system, sugar-specific permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CDIF630_00998 ABC-type transport system, sugar-specific permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CDIF630_00994 ABC-type transport system, sugar-family ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CDIF630_00997 ABC-type transport system, sugar-family ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CDIF630_02406 ABC-type transport system, cystine / aminoacid-family extracellular solute-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CDIF630_02409 ABC-type transport system, cystine / aminoacid-family extracellular solute-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CDIF630_02407 ABC-type transport system, cystine / aminoacid-family permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D CDIF630_02408 ABC-type transport system, cystine / aminoacid-family permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D CDIF630_02404 ABC-type transport system, cystine / aminoacid-family ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CDIF630_01972 ABC-type transport system, aminoacid-family extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CDIF630_01973 ABC-type transport system, aminoacid-family permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D CDIF630_01974 ABC-type transport system, aminoacid-family ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CDIF630_02926 appA; ABC-type transport system, oligopeptide-family solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CDIF630_00974 oppA; ABC-type transport system, oligopeptide-family extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CDIF630_00972 oppB; ABC-type transport system, oligopeptide-family permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CDIF630_02927 appB; ABC-type transport system, oligopeptide-family permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CDIF630_02928 appC; ABC-type transport system, oligopeptide-family permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CDIF630_00973 oppC; ABC-type transport system, oligopeptide-family permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CDIF630_02925 appD; ABC-type transport system, ATP-binding protein, putative oligopeptide transport system K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CDIF630_00975 oppD; ABC-type transport system, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CDIF630_02924 appF; ABC-type transport system, ATP-binding protein, putative oligopeptide transport system K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CDIF630_03146 fhuD; ABC-type transport system, ferrichrome-specific extracellular solute-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D CDIF630_03145 fhuB; ABC-type transport system, ferrichrome-specific permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D CDIF630_03144 fhuG; ABC-type transport system, ferrichrome-specific permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D CDIF630_03143 fhuC; ABC-type transport system, ferrichrome-specific ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D CDIF630_01827 yclQ; putative ABC transporter solute-binding protein YclQ K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CDIF630_01825 yclO; putative ABC transporter permease protein YclO K25283 yclO; iron-siderophore transport system permease protein
D CDIF630_01824 yclN; putative ABC transporter permease protein YclN K25284 yclN; iron-siderophore transport system permease protein
D CDIF630_01826 yclP; putative ABC transporter ATP-binding protein YclP K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CDIF630_03283 btuF; ABC-type transport system, cobalamin-specific extracellular solute-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CDIF630_03282 btuC; ABC-type transport system, cobalamin-specific permease K25027 btuC; cobalamin transport system permease protein
D CDIF630_03281 btuD; ABC-type transport system, cobalamin-specific ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CDIF630_00453 cbiN; ABC-type transport system, cobalt-specific extracellular solute-binding protein K02009 cbiN; cobalt/nickel transport protein
D CDIF630_00454 cbiQ1; ABC-type transport system, cobalt-specific permease K02008 cbiQ; cobalt/nickel transport system permease protein
D CDIF630_00452 cbiM; cobalt transport protein K02007 cbiM; cobalt/nickel transport system permease protein
D CDIF630_00455 cbiO; ABC-type transport system, cobalt-specific ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CDIF630_03256 bioY; biotin transporter K03523 bioY; biotin transport system substrate-specific component
D CDIF630_01868 putative membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D CDIF630_03356 putative membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D CDIF630_00557 putative membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D CDIF630_00558 ABC-type transport system, cobalt-specific permease K16785 ecfT; energy-coupling factor transport system permease protein
D CDIF630_00172 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CDIF630_00170 ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CDIF630_00171 ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CDIF630_00559 ABC-type transport system, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CDIF630_01791 ABC-type transport system, permease K09696 natB; sodium transport system permease protein
D CDIF630_01790 ABC-type transport system, ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CDIF630_00782 cdd4; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D CDIF630_00781 cdd3; ABC-type transport system, lantibiotic / multidrug-family permease K20460 nukE; lantibiotic transport system permease protein
D CDIF630_00780 cdd2; ABC-type transport system, lantibiotic / multidrug-family permease K20461 nukG; lantibiotic transport system permease protein
D CDIF630_00607 spaE; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_01506 cprB; ABC-type transport system, lantibiotic / multidrug-family permease K20491 nisE; lantibiotic transport system permease protein
D CDIF630_00608 spaG; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_01507 cprC; ABC-type transport system, lantibiotic / multidrug-family permease K20492 nisG; lantibiotic transport system permease protein
D CDIF630_00606 spaF; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_01505 cprA; ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CDIF630_01419 ABC-type transport system, multidrug-family permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CDIF630_01420 ABC-type transport system, multidrug-family permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CDIF630_01421 ABC-type transport system, multidrug-family ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CDIF630_00444 ABC-type transport system, permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00942 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_01239 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_01238 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00443 ABC-type transport system, permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00943 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00492 ABC-type transport system, multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CDIF630_00445 ABC-type transport system, bacitracin / multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_00493 ABC-type transport system, multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_00940 ABC-type transport system, multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_01240 ABC-type transport system, multidrug-family ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CDIF630_03338 ABC-type transport system, permease K11632 bceB; bacitracin transport system permease protein
D CDIF630_01701 ABC-type transport system, permease K11632 bceB; bacitracin transport system permease protein
D CDIF630_01700 ABC-type transport system, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CDIF630_03339 ABC-type transport system, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CDIF630_01708 ABC-type transport system, permease protein K11636 yxdM; putative ABC transport system permease protein
D CDIF630_03268 ABC-type transport system, permease K11636 yxdM; putative ABC transport system permease protein
D CDIF630_01707 ABC-type transport system, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CDIF630_03269 ABC-type transport system, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CDIF630_01950 ABC-type transport system, multidrug-family permease K16905 K16905; fluoroquinolone transport system permease protein
D CDIF630_03491 ABC-type transport system, multidrug-family permease K16905 K16905; fluoroquinolone transport system permease protein
D CDIF630_01949 ABC-type transport system, multidrug-family permease K16906 K16906; fluoroquinolone transport system permease protein
D CDIF630_03492 ABC-type transport system, multidrug-family permease K16906 K16906; fluoroquinolone transport system permease protein
D CDIF630_03493 ABC-type transport system, multidrug-family ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D CDIF630_01948 ABC-type transport system, multidrug-family ATP-binding protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D CDIF630_03662 ABC-type transport system, multidrug-family permease K25154 evrC; viologen exporter family transport system permease protein
D CDIF630_03663 ABC-type transport system, multidrug-family permease K25155 evrB; viologen exporter family transport system permease protein
D CDIF630_03664 ABC-type transport system, multidrug-family ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D CDIF630_00419 ABC-type transport system, bacitracin / multidrug-family permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CDIF630_01778 ABC-type transport system, multidrug-family permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CDIF630_02328 ABC-type transport system, permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CDIF630_02246 ABC-type transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CDIF630_00418 ABC-type transport system, bacitracin / multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_01669 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_00765 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_01779 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_01783 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_01794 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_00758 ABC-type transport system, lantibiotic / multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_02329 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_02245 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_01190 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_01854 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_02094 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_03453 ABC-type transport system, multidrug-family ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CDIF630_00490 ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_03905 ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_01695 ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_00588 ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_01631 ABC-type transport system, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_02167 ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_02076 vexP1; ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_02078 vexP3; ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_03947 ABC-type transport system, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CDIF630_00464 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_00491 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_03906 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_03946 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_01696 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_02152 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_00587 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_00612 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_01630 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_02160 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_02166 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_02786 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_02077 vexP2; ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_00725 ABC-type transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CDIF630_03931 ABC-type transport system, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CDIF630_00770 cdu2; na(+) / h(+) antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D CDIF630_02334 putative anion:Na+ symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D CDIF630_02221 effD; putative drug / sodium antiporter, MATE family K18908 mepA; MATE family, multidrug efflux pump
D CDIF630_03154 putative drug / sodium antiporter, MATE family K26939 norM; MATE family, multidrug efflux pump
D CDIF630_01120 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_00290 putative drug / sodium antiporter, MatE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_02333 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_01671 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_00742 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_01579 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_03501 putative multi antimicrobial extrusion protein, MatE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_03142 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_01709 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_00562 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_03661 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_02260 putative drug / sodium antiporter, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CDIF630_02964 transporter, major facilitator superfamily (MFS) K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D CDIF630_02009 transporter, major facilitator superfamily (MFS) K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CDIF630_03490 cme; multidrug resistance protein cme, transporter, major facilitator superfamily (MFS) K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CDIF630_03897 transporter, major facilitator superfamily (MFS) K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D CDIF630_02665 transporter, major facilitator superfamily (MFS) K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D CDIF630_03018 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CDIF630_03019 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CDIF630_02920 ptsG-A; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03387 PTS system, glucose-like IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02761 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03311 PTS system, arabinose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_03341 PTS system, maltose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CDIF630_02921 ptsG-BC; PTS system, glucose-specific IIBC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CDIF630_03372 PTS system, glucose-like IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CDIF630_02759 PTS system, maltose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_03314 PTS system, arabinose-specific IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_01492 PTS system, glucose-like IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CDIF630_00597 PTS system, sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CDIF630_00934 bglF1; PTS system, beta-glucoside-specific IIABC component, bglF1 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03422 bglF5; PTS system, beta-glucoside-specific IIABC component, bglF5 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03400 bglF3; PTS system, beta-glucoside-specific IIABC component, bglF3 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03380 bglF2; PTS system, beta-glucoside-specific IIABC component, bglF2 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03410 bglF4; PTS system, beta-glucoside-specific IIABC component, bglF4 K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03412 PTS system, beta-glucoside-like IIBC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_00515 bglF; PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CDIF630_03344 PTS system, maltose-specific IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CDIF630_00328 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02819 PTS system, mannosylglycerate-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02735 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_03300 PTS system, mannose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_03417 PTS system, fructose-like IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CDIF630_02821 PTS system, mannosylglycerate-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_03298 PTS system, mannose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_03419 PTS system, fructose-like IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_02503 fruABC; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CDIF630_02820 PTS system, mannosylglycerate-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D CDIF630_03299 PTS system, mannose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D CDIF630_00330 PTS system, fructose-like IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D CDIF630_02734 PTS system, fructose-like IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D CDIF630_00931 PTS system, fructose-type IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D CDIF630_00329 PTS system, fructose-like IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D CDIF630_02733 PTS system, fructose-like IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D CDIF630_02571 mtlF; PTS system, mannitol-specific, EIIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D CDIF630_02573 mtlA; PTS system, mannitol-specific, IICB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CDIF630_03369 mngA; PTS system, 2-O-a-mannosyl-D-glycerate-specific IIABC component K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195]
D CDIF630_00252 PTS system, lactose / cellobiose-family IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03971 licA; PTS system, lichenan-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03148 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03363 PTS system, beta-glycoside-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03756 PTS system, lactose / cellobiose-family IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00983 PTS system, maltose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00253 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03972 licB; PTS system, lichenan-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00981 PTS system, maltose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_01777 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03152 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03365 PTS system, beta-glycoside-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03755 PTS system, lactose / cellobiose-family IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_03333 PTS system, peptidoglycan degradation IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CDIF630_00254 PTS system, lactose / cellobiose-family IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03969 licC; PTS system, lichenan-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_00982 PTS system, maltose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03151 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03364 PTS system, beta-glycoside-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03754 PTS system, lactose / cellobiose-family IIC component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_03332 PTS system, peptidoglycan degradation IIC membrane component K02761 celB; cellobiose PTS system EIIC component
D CDIF630_00885 srlB; PTS system, sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CDIF630_02656 PTS system, sorbitol-like IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CDIF630_00883 srlEa; PTS system, sorbitol-specific IIB N-terminal component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_00884 srlEb; PTS system, sorbitol-specific IIB C-terminal component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_02659 PTS system, sorbitol-like IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CDIF630_00882 srlA; PTS system, sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CDIF630_02660 PTS system, sorbitol-like IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CDIF630_00103 PTS system, galactitol-type IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_02565 PTS system, arabitol / xylitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_02517 PTS system, fructose / mannitol family IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CDIF630_00104 PTS system, galactitol-type IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_01227 PTS system, galactiol-type IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_02564 PTS system, arabitol / xylitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_02516 PTS system, fructose / mannitol family IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CDIF630_00105 PTS system, galactitol-type IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_02515 PTS system, fructose / mannitol family IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_02563 PTS system, arabitol / xylitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D CDIF630_03351 xynB; PTS system, xyloside-specific IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CDIF630_00408 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_00620 PTS system, ribitol-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_01218 PTS system, mannose-type IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03350 xynA; PTS system, xyloside-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CDIF630_03353 xynC; PTS system, xyloside-specific IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_03577 PTS system, mannose / fructose / sorbose-type IIC component K02795 manY; mannose PTS system EIIC component
D CDIF630_00623 PTS system, ribitol-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03352 xynD; PTS system, xyloside-specific IID component K02796 manZ; mannose PTS system EIID component
D CDIF630_03578 PTS system, mannose / fructose / sorbose-type IIA component K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D CDIF630_01220 PTS system, mannose-type IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D CDIF630_03579 PTS system, mannose / fructose / sorbose-type IIB component K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D CDIF630_01221 PTS system, mannose-type IIC component K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D CDIF630_01222 PTS system, mannose-type IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D CDIF630_03576 PTS system, mannose / fructose / sorbose-type IID component K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D CDIF630_00410 PTS system, mannose-type IIA component K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203]
D CDIF630_00411 PTS system, mannose-type IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D CDIF630_00621 PTS system, ribitol-specific IIB component K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203]
D CDIF630_00412 PTS system, mannose-type IIC component K17466 dgaC; D-glucosaminate PTS system EIIC component
D CDIF630_00622 PTS system, ribitol-specific IIC component K17466 dgaC; D-glucosaminate PTS system EIIC component
D CDIF630_00413 PTS system, mannose-type IID component K17467 dgaD; D-glucosaminate PTS system EIID component
D CDIF630_03953 PTS system, fructose / mannitol-family IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CDIF630_02806 PTS system, fructose / mannitol-family IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CDIF630_03952 PTS system, fructose / mannitol-family IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CDIF630_02804 PTS system, fructose / mannitol family IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CDIF630_03708 putative formate / nitrite transporter K21993 fdhC; formate transporter
D CDIF630_02463 putative formate / nitrite transporter K02598 nirC; nitrite transporter
D CDIF630_00022 mscS; small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D CDIF630_01797 putative mechanosensitive ion channel protein, MscS family K03442 mscS; small conductance mechanosensitive channel
D CDIF630_02680 putative divalent cation transporter, MgtE family K06213 mgtE; magnesium transporter
D CDIF630_00380 motA; flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CDIF630_00861 putative MotA / TolQ / ExbB proton channel K02556 motA; chemotaxis protein MotA
D CDIF630_00381 motB; flagellar motor rotation protein MotB (chemotaxis protein MotB) K02557 motB; chemotaxis protein MotB
D CDIF630_00862 putative OmpA / MotB proton channel K02557 motB; chemotaxis protein MotB
D CDIF630_02033 putative cation (Mg2+ and Co2+) transport-related, membrane protein K03284 corA; magnesium transporter
D CDIF630_02351 corA; magnesium transport protein CorA K03284 corA; magnesium transporter
D CDIF630_01184 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CDIF630_03126 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CDIF630_01603 putative transporter, LrgA family K06518 cidA; holin-like protein
D CDIF630_02122 eutK; ethanolamine carboxysome strutural protein K04027 eutM; ethanolamine utilization protein EutM
D CDIF630_02865 putative amino acid permease K20265 gadC; glutamate:GABA antiporter
D CDIF630_01231 zupT; putative zinc / iron transporter, ZupT subfamiliy K07238 TC.ZIP; zinc transporter, ZIP family
D CDIF630_03794 putative zinc / iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D CDIF630_00617 sugE; quaternary ammonium compound-resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CDIF630_00482 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CDIF630_03302 putative glucose uptake protein K05340 glcU; glucose uptake protein
D CDIF630_01577 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CDIF630_03077 gntP; putative gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CDIF630_01928 putative divalent ion symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CDIF630_03138 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D CDIF630_03289 putative (2R)-sulfolactate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D CDIF630_00878 putative Ca2+ / na+ antiporter K07301 yrbG; cation:H+ antiporter
D CDIF630_01940 gltC; sodium / glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CDIF630_00577 na+ / h+ antiporter, NhaA family K03315 nhaC; Na+:H+ antiporter, NhaC family
D CDIF630_02996 putative na+ / h+ antiporter, NhaC family K03315 nhaC; Na+:H+ antiporter, NhaC family
D CDIF630_02923 nhaK; sodium, potassium, lithium and rubidium / h(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CDIF630_03939 nhaP2; k(+) / h(+) antiporter K11105 cvrA; potassium/hydrogen antiporter
D CDIF630_02325 nhaP1; k(+) / h(+) antiporter K11105 cvrA; potassium/hydrogen antiporter
D CDIF630_00810 ktrB; ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D CDIF630_00811 ktrC; ktr system potassium uptake protein C K03499 trkA; trk/ktr system potassium uptake protein
D CDIF630_01905 codB; putative cytosine permease K10974 codB; cytosine permease
D CDIF630_03001 putative cytosine permease K10974 codB; cytosine permease
D CDIF630_02848 uraA; uracil permease K02824 uraA; uracil permease
D CDIF630_03472 xanthine / urate permease K24206 uacT; uric acid transporter
D CDIF630_02331 pbuG; adenine / guanine / hypoxanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CDIF630_02961 adeP; adenine permease AdeP K06901 pbuG; adenine/guanine/hypoxanthine permease
D CDIF630_00719 chloride ion channel protein K03281 clcA; chloride channel protein, CIC family
D CDIF630_00769 chloride ion channel protein K03281 clcA; chloride channel protein, CIC family
D CDIF630_00323 putative chromate transporter K07240 chrA; chromate transporter
D CDIF630_03603 chrA; chromate transport protein ChrA K07240 chrA; chromate transporter
D CDIF630_03604 chrA'; chromate transport protein ChrA' K07240 chrA; chromate transporter
D CDIF630_03586 putative transporter, YipB-like K03324 yjbB; phosphate:Na+ symporter
D CDIF630_01919 putative sodium:phosphate symporter K03324 yjbB; phosphate:Na+ symporter
D CDIF630_03811 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CDIF630_01666 putative membrane protein (virulence factor (mvin)) K03980 murJ; putative peptidoglycan lipid II flippase
D CDIF630_03044 mviN; transmembrane virulence factor / flippase K03980 murJ; putative peptidoglycan lipid II flippase
D CDIF630_02353 putative malate transporter K24180 mleP; malate permease and related proteins
D CDIF630_03460 putative malate transporter K24180 mleP; malate permease and related proteins
D CDIF630_02521 azlC; branched-chain amino acid transport, permease K26605 azlC; branched chain amino acid efflux pump
D CDIF630_02522 azlD; branched-chain amino acid transport, AzlD K26606 azlD; branched chain amino acid efflux pump
D CDIF630_00266 ribU; riboflavin transporter K23675 fmnP; riboflavin transporter
D CDIF630_02906 spoVE; cell division / stage V sporulation protein K03588 ftsW; cell division protein FtsW
D CDIF630_03295 putative cytochrome C assembly protein K06196 ccdA; cytochrome c-type biogenesis protein
D CDIF630_01641 feoA1; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CDIF630_01642 feoA2; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CDIF630_01685 feoA3; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CDIF630_03573 feoA5; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CDIF630_01939 feoA4; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CDIF630_01643 feoB1; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CDIF630_01684 feoB2; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CDIF630_03574 feoB3; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CDIF630_02689 putative transmembrane signaling protein, TspO / MBR family K05770 TSPO; translocator protein
D CDIF630_01588 putative magnesium transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CDIF630_03570 putative magnesium transport ATPase, MgtC / SapB family K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CDIF630_03679 mgtC; magnesium-transporting ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:pdc02044]
D CDIF630_02542 putative pilin protein K02456 gspG; general secretion pathway protein G
D CDIF630_03817 putative type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CDIF630_03594 putative type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D CDIF630_03821 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D CDIF630_03596 putative pilus assembly ATPase K02652 pilB; type IV pilus assembly protein PilB
D CDIF630_03825 putative type IV pilus transporter system, ATP-binding K02652 pilB; type IV pilus assembly protein PilB
D CDIF630_03824 putative type IV pilus secretion protein K02653 pilC; type IV pilus assembly protein PilC
D CDIF630_03595 putative type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D CDIF630_03593 putative pilus assembly protein K02662 pilM; type IV pilus assembly protein PilM
D CDIF630_03823 putative membrane protein K02662 pilM; type IV pilus assembly protein PilM
D CDIF630_03818 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D CDIF630_02875 uncharacterized protein K02221 yggT; YggT family protein
D CDIF630_02744 comE; competence protein ComEA K02237 comEA; competence protein ComEA
D CDIF630_03788 comEB2; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CDIF630_02104 comEB1; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CDIF630_02721 putative membrane protein K02238 comEC; competence protein ComEC
D CDIF630_02724 putative DNA uptake transporter K02238 comEC; competence protein ComEC
D CDIF630_00387 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CDIF630_00371 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CDIF630_00373 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CDIF630_00374 fliI; ATP synthase subunit beta FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CDIF630_00395 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00350 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00383 fliZ; flagellar protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D CDIF630_00384 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CDIF630_00385 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CDIF630_00386 flhB; bifunctional flagellar biosynthesis protein FliR / FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CDIF630_01259 putative conjugative transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CDIF630_00539 putative conjugative transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CDIF630_02051 putative conjugative transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CDIF630_00260 secA1; protein translocase subunit SecA1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_03055 secA2; protein translocase subunit secA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CDIF630_00124 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D CDIF630_03461 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D CDIF630_00159 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D CDIF630_01405 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CDIF630_01403 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CDIF630_03066 preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D CDIF630_04008 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:pdc02042]
D CDIF630_03304 putative transporter K11041 eta; exfoliative toxin A/B
D CDIF630_00773 toxB; toxin B K11063 tcdAB; toxin A/B
D CDIF630_01184 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CDIF630_03126 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CDIF630_01714 putative channel-forming hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pdc02022]
D CDIF630_02891 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CDIF630_02892 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CDIF630_00938 two-component response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CDIF630_00632 two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CDIF630_02031 kdpD; two-component sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CDIF630_00633 two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CDIF630_02032 kdpE; two-component response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CDIF630_02162 two-component response regulator K11329 rpaB; two-component system, OmpR family, response regulator RpaB
D CDIF630_01698 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CDIF630_03336 two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CDIF630_03337 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CDIF630_01699 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CDIF630_03271 graS; two-component sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CDIF630_01874 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CDIF630_01873 two-component response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CDIF630_02338 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_02339 two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_02079 vncR; two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_01802 vanS; two-component sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_01801 vanR; two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_02824 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_00610 spaK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_01508 cprK; two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00613 two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CDIF630_00614 two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_03622 cprR; two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_00609 spaR; two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_03566 two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CDIF630_01242 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CDIF630_02984 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CDIF630_01363 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CDIF630_02857 cdtR; binary toxin regulator, LytTR family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CDIF630_02856 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CDIF630_02855 two-component response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CDIF630_01930 two-component response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D CDIF630_00652 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CDIF630_00646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CDIF630_00655 cheB; putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CDIF630_03105 two-component response regulator K07720 yesN; two-component system, response regulator YesN
D CDIF630_02115 eutW; two-component sensor histidine kinase, ethanolamine specific K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D CDIF630_02114 eutV; two-component response regulator, ethanolamine specific K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:pdc02035]
D CDIF630_00652 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CDIF630_00649 cheW1; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CDIF630_00653 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CDIF630_00647 cheC; chemotaxis protein CheY-P phosphatase CheC K03410 cheC; chemotaxis protein CheC
D CDIF630_00648 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CDIF630_00654 cheR; methyl-accepting chemotaxis proteins methyltransferase, MCP family K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CDIF630_00655 cheB; putative protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CDIF630_00646 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CDIF630_00651 putative methyl-accepting chemotaxis receptor, MCP family K03406 mcp; methyl-accepting chemotaxis protein
D CDIF630_00373 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CDIF630_00374 fliI; ATP synthase subunit beta FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CDIF630_00375 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D CDIF630_00383 fliZ; flagellar protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D CDIF630_00384 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CDIF630_00385 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CDIF630_00386 flhB; bifunctional flagellar biosynthesis protein FliR / FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CDIF630_00387 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CDIF630_00372 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CDIF630_00394 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CDIF630_00395 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00350 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CDIF630_00371 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CDIF630_00382 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CDIF630_00370 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CDIF630_00376 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CDIF630_00368 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CDIF630_00369 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CDIF630_00377 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CDIF630_00392 flgG1; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D CDIF630_00393 flgG2; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CDIF630_00378 flgE; flagellar hook protein FlgE (Distal rod protein) K02390 flgE; flagellar hook protein FlgE
D CDIF630_00353 flgK; flagellar hook-associated protein FlgK (or HAP1) K02396 flgK; flagellar hook-associated protein 1
D CDIF630_00354 flgL; flagellar hook-associated protein FlgL (or HAP3) K02397 flgL; flagellar hook-associated protein 3 FlgL
D CDIF630_00361 fliC; flagellin C K02406 fliC; flagellin
D CDIF630_00359 fliD; flagellar hook-associated protein 2 FliD (or HAP2) K02407 fliD; flagellar hook-associated protein 2
D CDIF630_00357 fliS1; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CDIF630_00358 fliS2; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CDIF630_00390 fliA; RNA polymerase sigma-28factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CDIF630_00380 motA; flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D CDIF630_00861 putative MotA / TolQ / ExbB proton channel K02556 motA; chemotaxis protein MotA
D CDIF630_00381 motB; flagellar motor rotation protein MotB (chemotaxis protein MotB) K02557 motB; chemotaxis protein MotB
D CDIF630_00862 putative OmpA / MotB proton channel K02557 motB; chemotaxis protein MotB
D CDIF630_00355 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D CDIF630_00351 flgM; negative regulator of flagellin synthesis (anti-sigma-d factor) K02398 flgM; negative regulator of flagellin synthesis FlgM
D CDIF630_00379 flbD; flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D CDIF630_00388 flhF; flagellar biosynthesis regulator FlhF (flagella-associated GTP-binding protein) K02404 flhF; flagellar biosynthesis protein FlhF
D CDIF630_00389 flhG; flagellar number regulator FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D CDIF630_03818 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D CDIF630_03594 putative type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D CDIF630_03821 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D CDIF630_03596 putative pilus assembly ATPase K02652 pilB; type IV pilus assembly protein PilB
D CDIF630_03825 putative type IV pilus transporter system, ATP-binding K02652 pilB; type IV pilus assembly protein PilB
D CDIF630_03824 putative type IV pilus secretion protein K02653 pilC; type IV pilus assembly protein PilC
D CDIF630_03595 putative type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D CDIF630_03817 putative type IV prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CDIF630_03593 putative pilus assembly protein K02662 pilM; type IV pilus assembly protein PilM
D CDIF630_03823 putative membrane protein K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins [BR:pdc03037]
D CDIF630_00770 cdu2; na(+) / h(+) antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:pdc04812]
D CDIF630_00243 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CDIF630_01292 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CDIF630_02900 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CDIF630_01296 minC; cell division regulator (septum placement) K03610 minC; septum site-determining protein MinC
D CDIF630_01297 minD; septum site-determining protein MinD (cell division inhibitor MinD) K03609 minD; septum site-determining protein MinD
D CDIF630_01298 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D CDIF630_04001 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CDIF630_04000 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CDIF630_04002 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pdc04147]
D CDIF630_00397 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CDIF630_03462 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CDIF630_03466 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CDIF630_03465 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CDIF630_03699 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CDIF630_03890 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_01823 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_03130 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_00315 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CDIF630_02707 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CDIF630_03585 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CDIF630_02574 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CDIF630_00122 tuf1; elongation factor EFTu / EF1A K02358 tuf; elongation factor Tu
D CDIF630_00137 tuf2; elongation factor EFTu / EF1A K02358 tuf; elongation factor Tu
D CDIF630_02692 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CDIF630_02396 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CDIF630_01199 thlA1; acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_03255 putative acetyl-CoA C-acetyltransferase, VraB-like K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_02930 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CDIF630_00160 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CDIF630_03008 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CDIF630_02747 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CDIF630_01984 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CDIF630_02306 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_03470 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CDIF630_02778 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CDIF630_01542 glpK2; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CDIF630_00857 glpK1; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CDIF630_01499 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CDIF630_03727 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CDIF630_01131 hpr; hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CDIF630_00345 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CDIF630_00960 purH'; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CDIF630_00101 acoL; acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00839 lpdA; glycine cleavage system, dihydrolipoyl dehydrogenase subunit K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CDIF630_00924 etfA2; acryloyl-CoA hydrogenase, electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CDIF630_01196 etfA3; butyryl-CoA dehydrogenase, electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CDIF630_03464 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pdc02048]
D CDIF630_03260 putative CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1
D CDIF630_03259 putative CRISPR-associated Cas2 family protein K09951 cas2; CRISPR-associated protein Cas2
D CDIF630_03262 putative CRISPR-associated Cas3 family helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CDIF630_03265 putative CRISPR-associated protein, CXXC-CXXC K19088 cst1; CRISPR-associated protein Cst1
D CDIF630_03264 putative CRISPR-associated autoregulator DevR family protein K19075 cst2; CRISPR-associated protein Cst2
D CDIF630_03261 putative CRISPR-associated Cas4 family protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D CDIF630_03263 putative CRISPR-associated Cas5 family protein K19090 cas5t; CRISPR-associated protein Cas5t
D CDIF630_03266 putative CRISPR-associated Cas6 family protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CDIF630_02700 putative CRISPR-associated protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CDIF630_01061 putative phage D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CDIF630_03021 putative N6 adenine-specific DNA methyltransferase, N12 class K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CDIF630_01052 putative phage C-5 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_03432 putative DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CDIF630_02317 putative restriction enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CDIF630_02316 5-methylcytosine restriction system component protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CDIF630_03772 ndoA; endoribonuclease toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CDIF630_03773 ndoAI; antitoxin EndoAI K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CDIF630_02900 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CDIF630_00243 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CDIF630_01292 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CDIF630_01432 iscS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CDIF630_00871 iscS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pdc01504]
D CDIF630_02225 ermB1; ribosomal RNA adenine N-6-methyltransferase (erythromycin resistance protein) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CDIF630_02229 ermB2; ribosomal RNA adenine N-6-methyltransferase (erythromycin resistance protein) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CDIF630_02847 ABC-type transport system, pristinamycin / multidrug-family ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CDIF630_03490 cme; multidrug resistance protein cme, transporter, major facilitator superfamily (MFS) K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CDIF630_02459 sat; streptogramin A acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CDIF630_00598 blaR; regulatory protein BlaR K02172 blaR1; bla regulator protein blaR1
D CDIF630_00661 putative penicillin-binding peptidase BlaR1-like, M56 family K02172 blaR1; bla regulator protein blaR1
D CDIF630_00303 putative membrane-associated metalloprotease, M56 family K02172 blaR1; bla regulator protein blaR1
D CDIF630_00586 uncharacterized protein, beta-lactamase / transpeptidase-like K02172 blaR1; bla regulator protein blaR1
D CDIF630_02630 putative beta-lactams signal-transducer K02172 blaR1; bla regulator protein blaR1
D CDIF630_00599 blaI; penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00660 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00785 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_01114 transcriptional regulator, beta-lactams repressor phage-type K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_01390 transcriptional regulator, beta-lactam repressor phage-type K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02010 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02525 transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02540 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02288 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02631 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02766 transcriptional regulator, beta-lactams repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_00771 cdu1; transcriptional regulator, beta-lactam repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CDIF630_02338 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_02339 two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_02079 vncR; two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CDIF630_03923 vanY3; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_02753 vanY2; D-alanyl-D-alanine carboxypeptidase, VanY-like K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CDIF630_01802 vanS; two-component sensor histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CDIF630_01801 vanR; two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_02824 two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CDIF630_01805 vanTG; alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D CDIF630_01803 vanG; D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D CDIF630_01804 vanY1; D-alanyl-D-alanine carboxypeptidase, VanY-like K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D CDIF630_03120 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D CDIF630_03119 dltB; D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D CDIF630_03118 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D CDIF630_03122 dltD; putative D-alanine transferase DltD K03740 dltD; D-alanine transfer protein
D CDIF630_02221 effD; putative drug / sodium antiporter, MATE family K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pdc00537]
D CDIF630_03890 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_01823 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CDIF630_03130 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pdc03100]
D CDIF630_00018 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00178 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00207 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00213 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CDIF630_00224 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00079 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CDIF630_00048 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00069 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00188 tRNA-Pyl K14219 tRNA-Arg; tRNA Arg
D CDIF630_00038 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00058 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00181 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00216 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CDIF630_00044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00064 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00184 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00222 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CDIF630_00057 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CDIF630_00078 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CDIF630_00049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CDIF630_00070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CDIF630_00189 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CDIF630_00041 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00182 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00219 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_03981 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CDIF630_00068 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00223 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00062 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00187 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_01173 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CDIF630_00055 tRNA-His K14226 tRNA-His; tRNA His
D CDIF630_00076 tRNA-His K14226 tRNA-His; tRNA His
D CDIF630_00196 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CDIF630_00015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00059 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00217 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00067 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_01835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_01274 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CDIF630_00056 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00071 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00077 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00190 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_03982 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CDIF630_00016 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00040 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00052 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00053 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00060 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00074 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00075 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00198 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00211 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00218 tRNA-Met K14230 tRNA-Met; tRNA Met
D CDIF630_00051 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CDIF630_00073 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CDIF630_00197 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CDIF630_00054 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CDIF630_00193 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CDIF630_00195 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CDIF630_00192 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00860 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00072 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00191 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CDIF630_00045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_00065 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_00185 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_02978 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_03979 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CDIF630_00194 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CDIF630_00046 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CDIF630_00066 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CDIF630_00186 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CDIF630_00043 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00063 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00080 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00183 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_00221 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_03980 tRNA-Val K14237 tRNA-Val; tRNA Val
D CDIF630_02726 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CDIF630_00017 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00212 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00199 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00439 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_02980 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_03725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00177 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_03870 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00035 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_01171 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00206 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CDIF630_00214 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_03724 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00201 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00019 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00013 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00440 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00179 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00208 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00036 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_03869 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_02979 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_01172 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CDIF630_00037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00202 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_03723 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_03868 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00441 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00020 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00215 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_01174 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00209 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00014 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00180 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CDIF630_00028 Bacteria_large_SRP K01983 ffs; SRP RNA
D CDIF630_02976 RNaseP_bact_a K01978 rnpB; M1 RNA
D CDIF630_03447 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CDIF630_01753 hisD; histidinol dehydrogenase (HDH) K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D CDIF630_00098 acoA; acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D CDIF630_00099 acoB; acetoin dehydrogenase E1 component (TPP-dependent beta subunit) K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D CDIF630_02304 xdhC1; xanthine dehydrogenase iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CDIF630_02311 xdhC2; xanthine dehydrogenase iron-sulfur binding subunit XdhC2 K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CDIF630_02323 xdhC3; xanthine dehydrogenase, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CDIF630_02621 iorA; indolepyruvate oxidoreductase, sununit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D CDIF630_02620 iorB; indolepyruvate oxidoreductase, sununit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D CDIF630_01304 fprA; flavo-diiron protein FprA K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CDIF630_01800 fprAnorR; NADH oxidase (H2O-forming) K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CDIF630_01711 putative FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CDIF630_02792 coenzyme A disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D CDIF630_02398 msrAB; peptide methionine sulfoxide reductase MsrA / MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D CDIF630_01736 cotG; spore coat protein-manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D CDIF630_03132 putative hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D CDIF630_02023 bcp; putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CDIF630_00946 dsr; desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D CDIF630_02427 ftnA; bacterial non-heme ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CDIF630_01704 nfnA; NADH-dependent reduced ferredoxin:NADP+ oxidoreductase, subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CDIF630_02592 grdA; glycine reductase complex, selenoprotein A (selenocysteine) K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CDIF630_02594 grdE; glycine reductase complex, component B subunits alpha and beta (Selenoprotein PB alpha / beta) K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D CDIF630_02589 grdB; glycine reductase complex, component B gamma subunit (selenocysteine) K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D CDIF630_02587 grdD; glycine reductase complex, component C subunit alpha K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CDIF630_02588 grdC; glycine reductase complex, component C subunit beta K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CDIF630_01931 glycine / sarcosine / betaine reductase complex,protein b, alpha / beta subunit K21583 grdG; sarcosine reductase complex component B subunit alpha [EC:1.21.4.3]
D CDIF630_01932 glycine/sarcosine/betaine reductase complex,protein b, gamma subunit (selenocysteine) K21584 grdF; sarcosine reductase complex component B subunit beta [EC:1.21.4.3]
D CDIF630_00205 nrdG; anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CDIF630_00876 pflA; formate C-acetyltransferase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CDIF630_01265 glycyl radical enzyme activase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CDIF630_03583 putative 4-hydroxyproline dehydratase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CDIF630_00274 hpdA; 4-hydroxyphenylacetate decarboxylase activating subunit K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CDIF630_00299 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CDIF630_01978 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CDIF630_00992 maa1; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CDIF630_01851 maa2; putative maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CDIF630_00571 ortA; 2-amino-4-ketopentanoate thiolase, alpha subunit K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263]
D CDIF630_00572 ortB; 2-amino-4-ketopentanoate thiolase, beta subunit K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D CDIF630_03258 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CDIF630_03942 yjaB; putative N-acetyltransferase YjaB K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CDIF630_03033 putative glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CDIF630_00316 larB; Ni2+ loading protein for larE K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CDIF630_02913 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CDIF630_02730 apbE; FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CDIF630_03359 tagK; tagatose-1-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D CDIF630_02812 yloV; uncharacterized protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CDIF630_02653 pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CDIF630_00090 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CDIF630_00225 ybbP; putative diadenylate cyclase-like protein YbbP K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CDIF630_00695 putative PEP-utilizing enzyme K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D CDIF630_00889 spoIIAB; anti-sigma F factor (stage II sporulation protein AB) K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CDIF630_03714 hprK; PTS system, HPr kinase / phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CDIF630_00087 mcsB; protein-arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CDIF630_00918 putative acetyl-CoA:hydroxymethylglutarate CoA-transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D CDIF630_00523 hadA; isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase K20882 hadA; (R)-2-hydroxy-4-methylpentanoate CoA-transferase [EC:2.8.3.24]
D CDIF630_02437 putative esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D CDIF630_03803 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CDIF630_02506 putative protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CDIF630_03987 putative signal transduction phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CDIF630_03853 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CDIF630_03838 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D CDIF630_03354 xylS; alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D CDIF630_03368 mngB2; mannosylglycerate hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D CDIF630_02822 mngB1; mannosylglycerate hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D CDIF630_03297 putative mannosylglycerate hydrolase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D CDIF630_03474 putative D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CDIF630_02838 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CDIF630_01952 def1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CDIF630_02852 pgdA2; putative peptidoglycan-N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CDIF630_01608 putative exported polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CDIF630_02986 putative polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CDIF630_01594 putative delta-lactam-biosynthetic de-N-acteylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CDIF630_02981 putative peptidoglycan-N-acetylmuramic acid deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CDIF630_03479 tdcF; putative regulatory endoribonuclease, YjgF-like K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CDIF630_02762 yjgF; 2-iminobutanoate / 2-iminopropanoate deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CDIF630_03792 ywlE; protein-arginine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CDIF630_00272 hpdB; 4-hydroxyphenylacetate decarboxylase large subunit K18427 hpdB; 4-hydroxyphenylacetate decarboxylase large subunit [EC:4.1.1.83]
D CDIF630_00273 hpdC; 4-hydroxyphenylacetate decarboxylase small subunit K18428 hpdC; 4-hydroxyphenylacetate decarboxylase small subunit [EC:4.1.1.83]
D CDIF630_00399 splB; spore photoproduct (thymine dimer) lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D CDIF630_00999 nnr; bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CDIF630_00525 hadB; 2-hydroxyisocaproyl-CoA dehydratase, alpha subunit K20025 hadB; (R)-2-hydroxyisocaproyl-CoA dehydratase alpha subunit [EC:4.2.1.157]
D CDIF630_00526 hadC; 2-hydroxyisocaproyl-CoA dehydratase, beta subunit K20026 hadC; (R)-2-hydroxyisocaproyl-CoA dehydratase beta subunit [EC:4.2.1.157]
D CDIF630_02308 dpaL1; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CDIF630_03476 dpaL2; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CDIF630_01264 choline trimethylamine-lyase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D CDIF630_01977 larE; Ni2+ transfer protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CDIF630_00317 larC; Ni2+ carrier LarC K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CDIF630_02487 eam; glutamate 2,3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D CDIF630_00524 hadI; activator of 2-hydroxyisocaproyl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CDIF630_01285 rnfD; electron transport complex protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CDIF630_01284 rnfC; electron transport complex protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CDIF630_01289 rnfB; electron transport complex protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CDIF630_01814 putative calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CDIF630_02025 P-type calcium transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CDIF630_03100 putative calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CDIF630_02751 calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CDIF630_00438 cadmium, zinc and cobalt-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CDIF630_03677 mgtA1; magnesium-transporting ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D CDIF630_03681 mgtA2; magnesium-transporting ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D CDIF630_01840 cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CDIF630_03618 fdhD; formate dehydrogenase formation protein K02379 fdhD; FdhD protein
D CDIF630_03928 ferredoxin K05337 fer; ferredoxin
D CDIF630_01769 ferredoxin K05337 fer; ferredoxin
D CDIF630_01286 rnfG; electron transport complex protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CDIF630_01287 rnfE; electron transport complex protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CDIF630_01288 rnfA; electron transport complex protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CDIF630_01433 fe-s iron-sulfur cluster assembly protein, nifu family K04488 iscU; nitrogen fixation protein NifU and related proteins
D CDIF630_01673 putative iron-sulfur binding protein K02574 napH; ferredoxin-type protein NapH
D CDIF630_01195 etfB3; butyryl-CoA dehydrogenase, electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CDIF630_03294 putative pyridine nucleotide-disulfide oxidoreductase, class I K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D CDIF630_02867 uncharacterized protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
D CDIF630_00680 uncharacterized protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
D CDIF630_01473 uncharacterized protein DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CDIF630_03536 prdD; proline reductase PrdD subunit K10795 prdD; D-proline reductase (dithiol)-stabilizing protein PrdD
D CDIF630_03534 prdE'; proline reductase prdE-like K10796 prdE; D-proline reductase (dithiol)-stabilizing protein PrdE
D CDIF630_03535 prdE; proline reductase PrdE subunit K10796 prdE; D-proline reductase (dithiol)-stabilizing protein PrdE
D CDIF630_00858 eutH1; ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D CDIF630_02128 eutH2; ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D CDIF630_02119 eutL; ethanolamine carboxysome structural protein K04026 eutL; ethanolamine utilization protein EutL
D CDIF630_02113 eutP; ethanolamine utilization protein K04029 eutP; ethanolamine utilization protein EutP
D CDIF630_02129 eutQ; ethanolamine utilization protein K04030 eutQ; ethanolamine utilization protein EutQ
D CDIF630_02112 eutS; ethanolamine carboxysome structural protein K04031 eutS; ethanolamine utilization protein EutS
D CDIF630_02877 putative pyridoxal 5'-phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CDIF630_02985 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein
D CDIF630_03883 sleB; spore cortex-lytic enzyme K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CDIF630_03010 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D CDIF630_01226 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D CDIF630_03102 abgT; aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CDIF630_00881 srlM; sorbitol operon activator protein K02466 gutM; glucitol operon activator protein
D CDIF630_01012 cspA; cold shock protein K03704 cspA; cold shock protein
D CDIF630_01511 cspB; cold shock protein CspB K03704 cspA; cold shock protein
D CDIF630_02548 cspD; cold shock protein D K03704 cspA; cold shock protein
D CDIF630_02205 cspC1; major cold shock protein CspC K03704 cspA; cold shock protein
D CDIF630_01063 putative phage anti-repressor K07741 antB; anti-repressor protein
D CDIF630_00263 putative S1 RNA-binding domain-containing protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CDIF630_00086 mcsA; protein-arginine kinase activator protein K19411 mcsA; protein arginine kinase activator
D CDIF630_03607 tig; trigger factor K03545 tig; trigger factor
D CDIF630_03448 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CDIF630_01425 putative magnesium chelatase K07391 comM; magnesium chelatase family protein
D CDIF630_01730 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D CDIF630_03789 yqeB; selenium-dependent molybdenum hydroxylase system protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CDIF630_01596 putative ribonuclease K06993 K06993; ribonuclease H-related protein
D CDIF630_01291 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CDIF630_01424 putative restriction endonuclease K07460 yraN; putative endonuclease
D CDIF630_01772 putative excinuclease ABC-like K07461 K07461; putative endonuclease
D CDIF630_01426 putative DNA processing smf single strand binding protein K04096 smf; DNA processing protein
D CDIF630_00508 putative replication initiation factor K07467 nicK; putative DNA relaxase
D CDIF630_03693 putative replication initiation factor K07467 nicK; putative DNA relaxase
D CDIF630_03644 putative replication initiation factor K07467 nicK; putative DNA relaxase
D CDIF630_01071 putative phage terminase, large subunit K06909 xtmB; phage terminase large subunit
D CDIF630_03195 putative phage terminase large subunit K06909 xtmB; phage terminase large subunit
D CDIF630_01429 putative replication-associated recombination protein a rara K07478 ycaJ; putative ATPase
D CDIF630_00337 transposase IS200 / IS605-like OrfA K07491 rayT; REP-associated tyrosine transposase
D CDIF630_00338 transposase IS200 / IS605-like OrfB K07496 K07496; putative transposase
D CDIF630_02805 tlpB10; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_00935 tlpB1; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_01468 tlpB2; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_01842 tlpB5; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_01740 tlpB4; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_02021 tlpB7; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_01665 tlpB3; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_01908 tlpB6; transposase-like protein B K07496 K07496; putative transposase
D CDIF630_02295 tlpB8; putative transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D CDIF630_00031 ybaB; nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CDIF630_00096 putative xylose transporter, sodium:galactoside symporter family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CDIF630_01724 steT1; serine / threonine exchanger K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CDIF630_02711 steT2; serine / threonine exchanger K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CDIF630_02496 transporter, major facilitator superfamily (MFS) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CDIF630_03896 putP; sodium / proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CDIF630_02472 putative Sodium:N-acetyl-beta-neuraminate symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CDIF630_01881 alsT; sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CDIF630_02511 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CDIF630_02664 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CDIF630_01412 brnQ-1; branched chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CDIF630_01413 brnQ-2; branched chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CDIF630_02958 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CDIF630_02583 putative succinate transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D CDIF630_00833 cooC; carbon monoxide dehydrogenase, accessory protein K07321 cooC; CO dehydrogenase maturation factor
D CDIF630_00840 acetyl-CoA synthase, nickel-inserting subunit K07321 cooC; CO dehydrogenase maturation factor
D CDIF630_00711 cotF; spore coat peptide assembly protein CotF K06333 cotJB; spore coat protein JB
D CDIF630_02642 cotJB; spore coat peptide assembly protein CotJB K06333 cotJB; spore coat protein JB
D CDIF630_00712 cotCB; spore-coat protein, manganese catalase K06334 cotJC; spore coat protein JC
D CDIF630_02643 cotD; spore coat protein-manganese catalase K06334 cotJC; spore coat protein JC
D CDIF630_04007 jag; putative SpoIIIJ-associated RNA / ssDNA-binding protein Jag K06346 jag; spoIIIJ-associated protein
D CDIF630_01547 kipA; KipI antagonist K06350 kipA; antagonist of KipI
D CDIF630_01546 kipI; kinase A inhibitor K06351 kipI; inhibitor of KinA
D CDIF630_03857 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D CDIF630_03856 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D CDIF630_00888 spoIIAA; anti-sigma F factor antagonist (stage II sporulation protein AA) K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CDIF630_01370 putative membrane protein K06384 spoIIM; stage II sporulation protein M
D CDIF630_02715 spoIIP; stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CDIF630_03884 spoIIR; pro-sigma(E) endopeptidase (stage II sporulation) K06387 spoIIR; stage II sporulation protein R
D CDIF630_01341 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CDIF630_01342 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D CDIF630_01343 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CDIF630_01344 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D CDIF630_01345 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D CDIF630_01346 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D CDIF630_01347 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D CDIF630_01348 spoIIIAH; stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D CDIF630_02883 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CDIF630_00891 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CDIF630_00892 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D CDIF630_00893 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CDIF630_03253 spoVFA; dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A
D CDIF630_03252 spoVFB; dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D CDIF630_03830 spoVG; regulator required for spore cortex synthesis K06412 spoVG; stage V sporulation protein G
D CDIF630_02139 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CDIF630_02943 sspA2; small, acid-soluble spore protein alpha K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D CDIF630_03546 sspB; small, acid-soluble spore protein beta K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D CDIF630_03889 yabG; sporulation-specific protease K06436 yabG; spore coat assemly protein
D CDIF630_02686 spoIV; stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
C 99993 Cell motility
C 99995 Signaling proteins
D CDIF630_01829 putative tellurium resistance protein K05792 terA; tellurite resistance protein TerA
D CDIF630_01811 terD1; tellurium resistance protein terD K05795 terD; tellurium resistance protein TerD
D CDIF630_01812 terD2; tellurium resistance protein terD K05795 terD; tellurium resistance protein TerD
D CDIF630_01998 terD4; tellurium resistance protein terD K05795 terD; tellurium resistance protein TerD
D CDIF630_01999 terD5; tellurium resistance protein terD K05795 terD; tellurium resistance protein TerD
D CDIF630_02343 bipA; GTP-binding protein BipA K06207 typA; GTP-binding protein
D CDIF630_02881 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D CDIF630_02685 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D CDIF630_01697 ABC-type transport system, permease K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D CDIF630_03558 phoU; phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D CDIF630_00258 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D CDIF630_03848 phnK; ABC-type transport system, phosphonate-specific ATP-binding protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D CDIF630_00988 dna binding domain, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
D CDIF630_02210 putative membrane protein, SdpI family K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CDIF630_03761 putative oxidoreductase with NAD(P)-binding rossmann-fold domain K03810 mviM; virulence factor
D CDIF630_01686 putative acyltransferase K02348 elaA; ElaA protein
D CDIF630_00406 putative PHP hydrolase K04477 ycdX; putative hydrolase
D CDIF630_01122 putative phosphatase / hydrolase K04477 ycdX; putative hydrolase
D CDIF630_03706 putative phosphatase K04477 ycdX; putative hydrolase
D CDIF630_03020 putative phospholipase K07001 K07001; NTE family protein
D CDIF630_00332 putative hydrolase, HAD superfamily, subfamily IA K07025 K07025; putative hydrolase of the HAD superfamily
D CDIF630_02148 FeS cluster biogenesis protein K15724 erpA; iron-sulfur cluster insertion protein
D CDIF630_01442 putative membrane protein K07038 K07038; inner membrane protein
D CDIF630_01807 putative membrane protein K07038 K07038; inner membrane protein
D CDIF630_01747 putative membrane-associated ribonuclease BN-like K07058 K07058; membrane protein
D CDIF630_03941 putative metal-containing protein K04750 phnB; PhnB protein
D CDIF630_03945 phnA; phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D CDIF630_00281 putative radical SAM-family protein K06871 K06871; uncharacterized protein
D CDIF630_03012 radical SAM maturase K06871 K06871; uncharacterized protein
D CDIF630_01737 yyaL; uncharacterized protein YyaL K06888 K06888; uncharacterized protein
D CDIF630_00986 uncharacterized protein K06889 K06889; uncharacterized protein
D CDIF630_02265 putative hydrolase K06889 K06889; uncharacterized protein
D CDIF630_01898 putative NAD(P)-binding protein K06929 K06929; uncharacterized protein
D CDIF630_01624 putative phosphohydrolase, HD superfamily K06950 K06950; uncharacterized protein
D CDIF630_02793 tcyP; putative L-cystine uptake protein K06956 K06956; uncharacterized protein
D CDIF630_01407 putative RNA-binding protein K06960 K06960; uncharacterized protein
D CDIF630_00120 uncharacterized protein, YacP-like K06962 K06962; uncharacterized protein
D CDIF630_01219 membrane complex biogenesis protein, btpa family K06971 K06971; uncharacterized protein
D CDIF630_02835 putative metal-dependent peptidase K06973 K06973; uncharacterized protein
D CDIF630_01430 putative acetyltransferase K06976 K06976; uncharacterized protein
D CDIF630_01551 putative hydrolase, CocE / NonD family K06978 K06978; uncharacterized protein
D CDIF630_01623 putative 5-nitroimidazole antibiotic resistance protein K07005 K07005; uncharacterized protein
D CDIF630_02491 putative PTS system, EIIC component K07035 K07035; uncharacterized protein
D CDIF630_03483 putative oxidoreductase K07079 K07079; uncharacterized protein
D CDIF630_00674 putative aldo / keto reductase K07079 K07079; uncharacterized protein
D CDIF630_01023 putative aldo/keto reductase K07079 K07079; uncharacterized protein
D CDIF630_02607 ABC-type transport system, multidrug-family permease K07089 K07089; uncharacterized protein
D CDIF630_00911 putative membrane protein, TauE-like K07090 K07090; uncharacterized protein
D CDIF630_00912 putative membrane protein, TauE-like K07090 K07090; uncharacterized protein
D CDIF630_02213 putative membrane protein K07090 K07090; uncharacterized protein
D CDIF630_01188 putative phosphodiesterase K07095 K07095; uncharacterized protein
D CDIF630_03608 putative metallophosphoesterase K07095 K07095; uncharacterized protein
D CDIF630_03925 putative phosphoesterase K07098 K07098; uncharacterized protein
D CDIF630_01267 putative phosphoesterase K07098 K07098; uncharacterized protein
D CDIF630_00474 putative phosphoesterase K07099 K07099; uncharacterized protein
D CDIF630_00021 niaR; transcription repressor NiaR K07105 K07105; uncharacterized protein
D CDIF630_00804 putative dehydrogenase, NAD(P)-binding K07124 K07124; uncharacterized protein
D CDIF630_02352 putative multiprotein-complex assembly TPR repeat-containing protein K07126 K07126; uncharacterized protein
D CDIF630_03587 putative oxidoreductase, FAD dependent K07137 K07137; uncharacterized protein
D CDIF630_00420 putative iron-sulfur-binding protein K07138 K07138; uncharacterized protein
D CDIF630_01575 putative oxidoreductase, fe-S subunit K07139 K07139; uncharacterized protein
D CDIF630_03361 putative membrane protein K07149 K07149; uncharacterized protein
D CDIF630_02173 putative membrane protein K07150 K07150; uncharacterized protein
D CDIF630_04009 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D CDIF630_02690 putative aspartyl / glutamyl-tRNA amidotransferase subunit B-related K09117 K09117; uncharacterized protein
D CDIF630_02880 uncharacterized protein K09157 K09157; uncharacterized protein
D CDIF630_01906 uncharacterized protein K09703 K09703; uncharacterized protein
D CDIF630_02138 GATS-like ACT domain protein K09707 K09707; uncharacterized protein
D CDIF630_02836 polyprenyl synthetase-related protein K09729 K09729; uncharacterized protein
D CDIF630_00349 hypothetical protein K09770 K09770; uncharacterized protein
D CDIF630_01355 putative membrane protein K09775 K09775; uncharacterized protein
D CDIF630_03867 putative membrane protein K09779 K09779; uncharacterized protein
D CDIF630_01404 putative DNA-binding regulator K09787 K09787; uncharacterized protein
D CDIF630_01144 S1 RNA binding domain protein K00243 K00243; uncharacterized protein
D CDIF630_02024 hypothetical protein K09861 K09861; uncharacterized protein
D CDIF630_03331 outer surface protein K09963 K09963; uncharacterized protein
D CDIF630_03968 putative glycoside hydrolase K09963 K09963; uncharacterized protein
D CDIF630_00720 uncharacterized protein, YcgI-like K09967 K09967; uncharacterized protein
D CDIF630_02483 uncharacterized protein, CoxE-like K09989 K09989; uncharacterized protein
D CDIF630_00478 putative hydrolase, HAD superfamily K05967 K05967; uncharacterized protein
D CDIF630_02889 putative spore envelope protein K05739 seaA; uncharacterized protein
D CDIF630_02890 putative membrane protein K05739 seaA; uncharacterized protein
D CDIF630_02723 putative N-acyltransferase K01163 K01163; uncharacterized protein
D CDIF630_01309 putative ribosome-associated protein K07584 ysxB; uncharacterized protein
D CDIF630_01463 uncharacterized protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024