+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Clostridioides difficile 630

% ! AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D CDIF630_01052 putative phage C-5 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CDIF630_03432 putative DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E CDIF630_01400 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D CDIF630_03809 hupA; non-specific DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) C Other nucleoid associated proteins D CDIF630_00001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D CDIF630_02179 hfq; Hfq-like RNA chaperone K03666 hfq; host factor-I protein D CDIF630_03859 transcriptional regulator, AsnC / lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CDIF630_03658 dimeric alpha-beta barrel protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D CDIF630_01402 smc; structural maintenance chromosome protein SMC K03529 smc; chromosome segregation protein D CDIF630_01449 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A D CDIF630_01450 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B C Divisome proteins D CDIF630_01480 ftsK; DNA FtsK / SpoIIIE translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CDIF630_02911 hypothetical protein K03586 ftsL; cell division protein FtsL D CDIF630_02904 putative cell division protein fts-Q type K03589 ftsQ; cell division protein FtsQ D CDIF630_02906 spoVE; cell division / stage V sporulation protein K03588 ftsW; cell division protein FtsW D CDIF630_02900 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CDIF630_00816 putative cell-division protein K09888 zapA; cell division protein ZapA D CDIF630_00176 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase, autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_00902 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_01106 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_03164 putative cell wall hydrolase / autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_03047 cwp6; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_02103 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_03024 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDIF630_02416 putative phage-related cell wall hydrolase (endolysin) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C Inhibitors of FtsZ assembly D CDIF630_01296 minC; cell division regulator (septum placement) K03610 minC; septum site-determining protein MinC D CDIF630_01297 minD; septum site-determining protein MinD (cell division inhibitor MinD) K03609 minD; septum site-determining protein MinD D CDIF630_01298 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D CDIF630_02873 putative cell-division initiation protein DivIVA K04074 divIVA; cell division initiation protein D CDIF630_02876 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF C Other chromosome partitioning proteins D CDIF630_00243 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CDIF630_01292 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CDIF630_01293 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CDIF630_01294 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CDIF630_01299 mrdB; rod shape-determining protein MrdB K05837 rodA; rod shape determining protein RodA D CDIF630_04001 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CDIF630_04000 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CDIF630_04002 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CDIF630_04005 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CDIF630_01371 tyrosine recombinase, XerD-like K04763 xerD; integrase/recombinase XerD D CDIF630_03810 yabN; bifunctional tetrapyrrole methylase / NTP pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D CDIF630_03601 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein D CDIF630_03702 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024