+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Prevotella denticola

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E HMPREF9137_0497 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins D HMPREF9137_1323 ftcD; glutamate formimidoyltransferase K13990 FTCD; glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centrosome associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D HMPREF9137_0197 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_0412 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D HMPREF9137_1351 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) C Other nucleoid associated proteins D HMPREF9137_1227 DnaJ domain protein K05516 cbpA; curved DNA-binding protein D HMPREF9137_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HMPREF9137_0246 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D HMPREF9137_0955 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex C Divisome proteins D HMPREF9137_0782 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D HMPREF9137_1035 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D HMPREF9137_0791 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HMPREF9137_2386 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HMPREF9137_0783 hypothetical protein K03589 ftsQ; cell division protein FtsQ D HMPREF9137_0787 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW D HMPREF9137_1087 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein D HMPREF9137_0781 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HMPREF9137_2497 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HMPREF9137_1062 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HMPREF9137_1928 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly C Other chromosome partitioning proteins D HMPREF9137_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D HMPREF9137_2095 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D HMPREF9137_2098 cell cycle protein, FtsW/RodA/SpoVE family K05837 rodA; rod shape determining protein RodA D HMPREF9137_1973 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF9137_1748 CobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein D HMPREF9137_1747 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HMPREF9137_1821 DNA gyrase/topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HMPREF9137_0626 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HMPREF9137_0586 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HMPREF9137_2379 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HMPREF9137_0888 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D HMPREF9137_0441 putative tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D HMPREF9137_0364 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D HMPREF9137_2239 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D HMPREF9137_1729 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D HMPREF9137_1933 mrp; ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D HMPREF9137_1812 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HMPREF9137_1814 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HMPREF9137_0179 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 30, 2024