+D GENES KO
#
KEGG Orthology (KO) - Parascardovia denticolens
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pdo00010]
D PSDT_0729 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D PSDT_0222 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSDT_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSDT_0820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PSDT_0651 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSDT_0821 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PSDT_1143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PSDT_0963 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSDT_0927 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0502 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PSDT_0649 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0990 putative glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
C 00020 Citrate cycle (TCA cycle) [PATH:pdo00020]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0591 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSDT_0590 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
C 00030 Pentose phosphate pathway [PATH:pdo00030]
D PSDT_0222 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSDT_0062 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PSDT_0059 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PSDT_0054 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PSDT_0784 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PSDT_0817 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PSDT_0818 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PSDT_1171 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PSDT_0917 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D PSDT_0406 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0526 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PSDT_1011 putative 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PSDT_1012 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PSDT_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions [PATH:pdo00040]
D PSDT_0796 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSDT_0306 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PSDT_0784 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PSDT_0307 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
C 00051 Fructose and mannose metabolism [PATH:pdo00051]
D PSDT_0641 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSDT_0670 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSDT_1138 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PSDT_0221 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PSDT_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSDT_0820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pdo00052]
D PSDT_0649 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PSDT_1184 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PSDT_1185 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PSDT_1131 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PSDT_0796 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0729 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D PSDT_0327 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PSDT_0239 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PSDT_1495 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PSDT_1074 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSDT_1075 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSDT_1490 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D PSDT_0319 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D PSDT_0306 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:pdo00500]
D PSDT_1074 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSDT_1075 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PSDT_1486 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D PSDT_0796 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSDT_0440 putative beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58]
D PSDT_0011 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0013 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0661 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0978 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PSDT_0860 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PSDT_0941 glycosyl hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PSDT_1511 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PSDT_1293 amylopullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D PSDT_0167 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D PSDT_1090 putative amylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D PSDT_1490 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D PSDT_0319 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D PSDT_1349 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PSDT_1415 putative amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PSDT_0843 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PSDT_0920 putative glycogen operon protein K01214 ISA; isoamylase [EC:3.2.1.68]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0729 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D PSDT_0222 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSDT_0641 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSDT_0670 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pdo00520]
D PSDT_1014 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PSDT_1013 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PSDT_0641 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSDT_0670 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PSDT_1055 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PSDT_1204 phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PSDT_0527 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PSDT_0258 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PSDT_1237 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PSDT_0308 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PSDT_0215 putative dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D PSDT_0729 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D PSDT_0990 putative glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0796 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSDT_1184 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PSDT_1185 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PSDT_1131 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PSDT_0239 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PSDT_0222 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSDT_1138 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PSDT_0221 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PSDT_0860 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pdo00620]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0761 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PSDT_0919 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PSDT_0918 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PSDT_0927 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSDT_1230 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PSDT_0502 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PSDT_0694 malolactic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D PSDT_1448 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pdo00630]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_1229 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PSDT_1230 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PSDT_0861 putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PSDT_0494 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0977 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0350 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PSDT_1440 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PSDT_0461 putative oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D PSDT_1011 putative 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:pdo00640]
D PSDT_0919 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PSDT_0918 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0761 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PSDT_1230 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PSDT_1229 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PSDT_0502 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PSDT_0682 putative alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PSDT_0461 putative oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:pdo00650]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PSDT_0591 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSDT_0590 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PSDT_0761 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PSDT_1155 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PSDT_1307 truncated alcohol dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:pdo00562]
D PSDT_1160 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PSDT_0121 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PSDT_0811 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D PSDT_0820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pdo00190]
D PSDT_0591 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSDT_0590 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PSDT_1369 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PSDT_1367 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PSDT_1368 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PSDT_1370 ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PSDT_1366 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PSDT_1373 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PSDT_1371 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PSDT_1372 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PSDT_1416 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PSDT_0099 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pdo00710]
D PSDT_0821 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PSDT_0651 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSDT_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSDT_0817 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PSDT_1171 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PSDT_0820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PSDT_0784 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PSDT_0818 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PSDT_1448 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:pdo00720]
D PSDT_1448 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PSDT_0591 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PSDT_0590 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_0129 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PSDT_0932 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PSDT_0918 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PSDT_0919 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:pdo00680]
D PSDT_0963 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSDT_1448 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PSDT_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PSDT_0919 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PSDT_0918 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PSDT_1143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:pdo00910]
D PSDT_0983 putative multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D PSDT_1154 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PSDT_0494 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0977 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_1417 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pdo00920]
D PSDT_1513 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PSDT_1514 cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pdo00061]
D PSDT_1230 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PSDT_1228 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PSDT_0771 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0775 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0850 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pdo00071]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_0771 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0775 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0850 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pdo00561]
D PSDT_1440 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PSDT_0682 putative alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PSDT_0519 conserved hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D PSDT_0731 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PSDT_0793 conserved hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSDT_1018 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSDT_0708 conserved hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D PSDT_1127 conserved hypothetical protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D PSDT_1495 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:pdo00564]
D PSDT_0260 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PSDT_0731 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PSDT_0793 conserved hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSDT_1018 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PSDT_0068 conserved hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PSDT_0781 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PSDT_0721 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PSDT_0785 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pdo00600]
D PSDT_0327 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PSDT_1495 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D PSDT_1102 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pdo00230]
D PSDT_0925 putative NTP pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0526 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PSDT_0608 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PSDT_0606 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PSDT_0611 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PSDT_0609 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PSDT_0607 phosphoribosylaminoimidazole synthase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PSDT_0602 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PSDT_0601 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PSDT_0610 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PSDT_0450 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PSDT_0801 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PSDT_0803 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PSDT_1281 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PSDT_0554 ribonucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D PSDT_1125 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PSDT_0773 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PSDT_1077 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PSDT_0280 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PSDT_0882 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PSDT_0915 GMP synthase/glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PSDT_0369 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PSDT_1213 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PSDT_1411 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PSDT_0621 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PSDT_0742 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PSDT_0960 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PSDT_0717 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PSDT_1043 conserved hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PSDT_0081 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PSDT_1322 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:pdo00240]
D PSDT_0757 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PSDT_0756 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PSDT_0836 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PSDT_0835 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PSDT_0834 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PSDT_0831 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PSDT_0832 putative dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PSDT_0374 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PSDT_0830 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PSDT_1037 conserved hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PSDT_0833 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PSDT_1214 putative orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PSDT_0779 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PSDT_0165 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PSDT_0868 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PSDT_0554 ribonucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D PSDT_0066 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PSDT_1411 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PSDT_0044 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PSDT_0125 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PSDT_0741 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PSDT_1148 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PSDT_1134 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pdo00250]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_0276 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PSDT_0278 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PSDT_0477 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PSDT_0514 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PSDT_0515 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PSDT_0081 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PSDT_0450 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PSDT_0836 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PSDT_0835 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PSDT_1154 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PSDT_0494 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0977 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0757 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PSDT_0756 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PSDT_1055 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PSDT_0608 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pdo00260]
D PSDT_1440 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PSDT_1143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0350 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PSDT_0065 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:pdo00270]
D PSDT_1513 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PSDT_1514 cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PSDT_0904 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PSDT_1297 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PSDT_1263 putative nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PSDT_1281 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PSDT_0418 putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_0502 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PSDT_0065 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:pdo00280]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_1229 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PSDT_1230 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_1155 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
D PSDT_0477 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis
D PSDT_0634 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pdo00310]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:pdo00220]
D PSDT_0372 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PSDT_0514 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PSDT_0515 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PSDT_0371 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PSDT_0494 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0977 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0757 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PSDT_0756 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PSDT_1154 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_0477 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:pdo00330]
D PSDT_1164 putative agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D PSDT_1243 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00350 Tyrosine metabolism [PATH:pdo00350]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_1243 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:pdo00360]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_1243 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:pdo00380]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pdo00400]
D PSDT_0869 shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_1243 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:pdo00430]
D PSDT_0918 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PSDT_0919 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pdo00450]
D PSDT_0904 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PSDT_0864 aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PSDT_1540 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PSDT_1519 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pdo00460]
D PSDT_0011 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0013 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0661 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0978 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00470 D-Amino acid metabolism [PATH:pdo00470]
D PSDT_0620 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PSDT_0261 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSDT_1191 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PSDT_0636 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PSDT_0276 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 00480 Glutathione metabolism [PATH:pdo00480]
D PSDT_0418 putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PSDT_1205 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PSDT_0054 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PSDT_0062 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PSDT_0913 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:pdo00515]
D PSDT_1523 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:pdo00514]
D PSDT_1523 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pdo00511]
D PSDT_0327 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PSDT_0997 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:pdo00542]
D PSDT_1079 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pdo00541]
D PSDT_0796 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PSDT_1131 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PSDT_0239 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PSDT_0241 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PSDT_1138 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PSDT_0221 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PSDT_0527 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:pdo00550]
D PSDT_0258 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PSDT_1237 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PSDT_0639 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PSDT_0636 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PSDT_0261 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSDT_0634 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PSDT_0417 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PSDT_0635 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PSDT_0638 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PSDT_0632 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PSDT_1502 putative penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A
D PSDT_0880 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PSDT_1445 conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D PSDT_1444 cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:pdo00552]
D PSDT_1079 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PSDT_1455 conserved hypothetical protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D PSDT_0217 putative phosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pdo00543]
D PSDT_1079 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PSDT_0207 putative glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D PSDT_1513 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pdo00730]
D PSDT_0439 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PSDT_0659 putative thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PSDT_1322 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pdo00740]
D PSDT_1221 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PSDT_0925 putative NTP pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:pdo00750]
D PSDT_0596 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PSDT_1282 putative oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pdo00760]
D PSDT_0273 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PSDT_0525 nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PSDT_0759 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PSDT_0750 putative amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PSDT_0083 putative transcriptional regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PSDT_0522 kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:pdo00770]
D PSDT_1421 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PSDT_1051 conserved hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PSDT_0271 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PSDT_0930 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PSDT_1227 putative 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:pdo00780]
D PSDT_1231 conserved hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pdo00785]
D PSDT_0353 putative lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0350 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pdo00790]
D PSDT_1123 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PSDT_1121 conserved hypothetical protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D PSDT_1122 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PSDT_1133 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PSDT_0643 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:pdo00670]
D PSDT_1133 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PSDT_0129 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PSDT_0932 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PSDT_0801 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PSDT_1295 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PSDT_1134 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PSDT_1247 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D PSDT_0254 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pdo00130]
D PSDT_1144 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PSDT_1389 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PSDT_0022 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PSDT_0060 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pdo00900]
D PSDT_0439 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PSDT_0216 conserved hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_1155 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PSDT_1156 hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D PSDT_1532 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PSDT_1530 putative phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D PSDT_1531 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D PSDT_1526 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PSDT_0733 isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PSDT_0417 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:pdo00903]
D PSDT_0042 conserved hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PSDT_0817 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PSDT_0241 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures [PATH:pdo01054]
D PSDT_0276 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D PSDT_0241 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pdo00946]
D PSDT_0011 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0013 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0661 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0978 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pdo00521]
D PSDT_0729 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
D PSDT_1019 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PSDT_0121 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PSDT_1160 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PSDT_0241 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PSDT_0729 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D PSDT_0241 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pdo00401]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_1243 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pdo00999]
D PSDT_1297 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PSDT_0011 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0013 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0661 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PSDT_0978 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pdo00362]
D PSDT_0895 conserved hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pdo00625]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D PSDT_0042 conserved hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pdo00626]
D PSDT_1346 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pdo03020]
D PSDT_1301 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PSDT_1300 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PSDT_1314 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PSDT_1298 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pdo03010]
D PSDT_0931 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PSDT_0777 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PSDT_1337 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PSDT_0879 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PSDT_1326 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PSDT_0243 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PSDT_1360 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PSDT_1329 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PSDT_1347 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PSDT_1344 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PSDT_1315 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PSDT_1361 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PSDT_1316 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PSDT_1330 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PSDT_1021 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PSDT_0356 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PSDT_1334 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PSDT_0245 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PSDT_1339 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PSDT_0847 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PSDT_0299 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PSDT_1340 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PSDT_1343 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PSDT_1342 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PSDT_1331 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PSDT_1328 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PSDT_1253 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PSDT_0246 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PSDT_1254 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PSDT_0298 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PSDT_1348 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PSDT_1333 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PSDT_1324 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PSDT_1336 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PSDT_1313 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PSDT_1327 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PSDT_1027 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PSDT_0669 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PSDT_0288 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PSDT_1338 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PSDT_1341 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PSDT_1332 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PSDT_0849 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PSDT_0289 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PSDT_0265 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PSDT_1335 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PSDT_1325 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PSDT_1093 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PSDT_0268 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PSDT_1241 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PSDT_1548 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PSDT_0668 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PSDT_1317 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PSDT_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PSDT_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PSDT_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PSDT_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PSDT_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PSDT_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pdo00970]
D PSDT_tRNA45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSDT_tRNA15 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSDT_tRNA44 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSDT_tRNA13 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA28 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA18 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSDT_tRNA34 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSDT_tRNA22 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PSDT_tRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSDT_tRNA08 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSDT_tRNA07 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSDT_tRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSDT_tRNA03 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSDT_tRNA23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSDT_tRNA30 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSDT_tRNA17 tRNA-His K14226 tRNA-His; tRNA His
D PSDT_tRNA43 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PSDT_tRNA02 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA04 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSDT_tRNA05 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSDT_tRNA42 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSDT_tRNA32 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSDT_tRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSDT_tRNA35 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSDT_tRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSDT_tRNA25 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSDT_tRNA36 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSDT_tRNA37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA41 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSDT_tRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSDT_tRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSDT_tRNA11 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PSDT_tRNA40 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSDT_tRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSDT_tRNA12 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSDT_tRNA21 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSDT_0254 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSDT_1032 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PSDT_1031 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PSDT_1033 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PSDT_0873 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PSDT_0745 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSDT_0424 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PSDT_0812 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PSDT_1017 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PSDT_0363 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PSDT_1519 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PSDT_1295 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PSDT_0226 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PSDT_0559 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSDT_1196 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PSDT_1145 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PSDT_1042 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSDT_1070 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PSDT_0744 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PSDT_0510 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PSDT_0511 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PSDT_0517 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSDT_0051 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pdo03060]
D PSDT_1323 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PSDT_0292 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PSDT_0819 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PSDT_0804 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D PSDT_1545 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSDT_0728 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSDT_0362 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PSDT_0047 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D PSDT_1026 putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PSDT_0431 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D PSDT_0358 conserved hypothetical protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
C 03050 Proteasome
D PSDT_1162 putative ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:pdo03018]
D PSDT_0287 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D PSDT_0963 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSDT_1020 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PSDT_0225 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PSDT_1206 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PSDT_0091 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PSDT_0464 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSDT_0099 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PSDT_1536 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pdo03030]
D PSDT_0646 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSDT_0433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSDT_0111 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSDT_0126 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSDT_0562 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSDT_0003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSDT_1446 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PSDT_0622 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PSDT_0142 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0244 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1068 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1170 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PSDT_1025 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PSDT_0985 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pdo03410]
D PSDT_0228 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PSDT_0459 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PSDT_1178 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PSDT_0710 putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PSDT_0985 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pdo03420]
D PSDT_0964 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PSDT_0825 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PSDT_0906 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D PSDT_0929 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PSDT_0824 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PSDT_0409 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_0881 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_1210 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_0985 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pdo03430]
D PSDT_0409 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_0881 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_1210 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_0489 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PSDT_0488 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PSDT_0142 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0244 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1068 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSDT_0003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSDT_0111 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSDT_0562 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSDT_0126 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSDT_0646 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSDT_0985 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PSDT_0074 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_0149 hypothetical phage protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pdo03440]
D PSDT_0142 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0244 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1068 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0004 recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D PSDT_0416 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PSDT_0113 recombination protein RecR K06187 recR; recombination protein RecR
D PSDT_0725 recombinase RecA K03553 recA; recombination protein RecA
D PSDT_0806 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PSDT_0805 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PSDT_0807 holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PSDT_1456 conserved hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PSDT_0266 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PSDT_0433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSDT_0003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSDT_0111 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSDT_0562 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSDT_0126 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSDT_0646 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSDT_1296 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pdo03250]
D PSDT_1076 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pdo02010]
D PSDT_1292 putative nitrate/sulfonate/bicarbonate ABC transporter permease component K05845 opuC; osmoprotectant transport system substrate-binding protein
D PSDT_1291 putative glycine betaine/L-proline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PSDT_0026 ABC transporter ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PSDT_1089 putative ABC transporter substrate binding component K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PSDT_1088 putative ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PSDT_1087 putative ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PSDT_1493 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PSDT_1492 sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PSDT_1491 sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PSDT_1003 ABC transporter substrate binding component K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D PSDT_1002 putative ABC transporter permease component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D PSDT_1001 ABC transporter permease component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D PSDT_0318 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein
D PSDT_1113 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein
D PSDT_0320 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein
D PSDT_1112 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein
D PSDT_0321 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein
D PSDT_1111 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein
D PSDT_0981 putative ABC transporter substrate binding component K10240 cebE; cellobiose transport system substrate-binding protein
D PSDT_0980 putative ABC transporter permease component K10241 cebF; cellobiose transport system permease protein
D PSDT_0979 putative ABC transporter permease component K10242 cebG; cellobiose transport system permease protein
D PSDT_0404 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein
D PSDT_0403 ribose ABC transporter permease component K10440 rbsC; ribose transport system permease protein
D PSDT_0402 ribose ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PSDT_0405 conserved hypothetical protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PSDT_0341 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein
D PSDT_0342 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein
D PSDT_0343 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PSDT_0558 putative ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein
D PSDT_0663 glutamate ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein
D PSDT_0664 glutamate ABC transporter permease component K10006 gluC; glutamate transport system permease protein
D PSDT_0665 glutamate ABC transporter permease component K10007 gluD; glutamate transport system permease protein
D PSDT_0662 glutamate ABC transporter ATP-binding component K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D PSDT_1303 putative truncated ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PSDT_1219 putative metal ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein
D PSDT_1217 putative metal ABC transporter permease component K02072 metI; D-methionine transport system permease protein
D PSDT_1218 putative metal ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein
D PSDT_0685 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0690 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0686 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein
D PSDT_0687 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein
D PSDT_0688 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D PSDT_0674 dipeptide/oligopeptide ABC transporter substrate binding component K13889 gsiB; glutathione transport system substrate-binding protein
D PSDT_0677 dipeptide/oligopeptide ABC transporter permease component K13890 gsiC; glutathione transport system permease protein
D PSDT_0676 dipeptide/oligopeptide ABC transporter permease component K13891 gsiD; glutathione transport system permease protein
D PSDT_0675 dipeptide/oligopeptide ABC transporter ATP-binding component K13892 gsiA; glutathione transport system ATP-binding protein
D PSDT_1425 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PSDT_0753 putative ABC transporter permease component K11051 cylB; multidrug/hemolysin transport system permease protein
D PSDT_0754 putative ABC transporter ATP-binding component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D PSDT_1063 cell division protein K09811 ftsX; cell division transport system permease protein
D PSDT_1064 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PSDT_0235 ABC transporter ATP-binding and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0236 ABC transporter ATP-binding and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_1433 ABC transporter ATP-binding component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0842 putative ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_1434 ABC transporter ATP-binding component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0841 putative ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0442 ABC transporter ATP-binding component K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
C 02060 Phosphotransferase system (PTS) [PATH:pdo02060]
D PSDT_0652 putative PTS system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PSDT_0653 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PSDT_0655 PTS system glucose-specific IIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pdo03070]
D PSDT_0292 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PSDT_0819 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PSDT_1323 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PSDT_0804 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D PSDT_1545 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSDT_0728 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSDT_0047 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D PSDT_0362 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PSDT_1388 truncated conserved hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PSDT_0141 conserved hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PSDT_1269 conserved hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pdo02020]
D PSDT_1140 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PSDT_0341 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein
D PSDT_0119 putative protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PSDT_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PSDT_0105 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PSDT_0106 conserved hypothetical protein K12510 tadB; tight adherence protein B
D PSDT_0494 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0977 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_1188 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PSDT_1132 phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pdo02024]
D PSDT_1303 putative truncated ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PSDT_0696 hypothetical protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D PSDT_0771 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0775 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0850 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_1188 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PSDT_0685 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0690 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0686 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein
D PSDT_0687 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein
D PSDT_0688 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D PSDT_0603 putative transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D PSDT_0615 peptides ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PSDT_0616 peptides ABC transporter substrate binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PSDT_0617 peptides ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PSDT_0618 peptides ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PSDT_1545 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PSDT_0292 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PSDT_0819 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PSDT_1323 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PSDT_0804 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D PSDT_0728 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSDT_0047 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D PSDT_0362 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D PSDT_0404 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D PSDT_0735 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PSDT_0963 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pdo01501]
D PSDT_0685 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0690 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0686 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein
D PSDT_0687 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein
D PSDT_0688 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D PSDT_0632 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pdo01502]
D PSDT_0261 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSDT_0620 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PSDT_0634 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PSDT_0635 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PSDT_0638 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D PSDT_1076 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pdo01000]
C 01001 Protein kinases [BR:pdo01001]
D PSDT_1504 putative serine-threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PSDT_0732 putative serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PSDT_1503 putative serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PSDT_0397 kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PSDT_1140 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PSDT_0468 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PSDT_0956 two-component sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pdo01009]
D PSDT_1500 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:pdo01002]
D PSDT_0431 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PSDT_0870 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PSDT_1264 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PSDT_0441 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PSDT_1280 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D PSDT_0915 GMP synthase/glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PSDT_0369 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PSDT_1220 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PSDT_1061 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PSDT_1137 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PSDT_0608 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PSDT_1055 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PSDT_0278 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PSDT_1403 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D PSDT_1404 putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D PSDT_0128 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PSDT_0031 conserved hypothetical protein K07052 K07052; CAAX protease family protein
D PSDT_1205 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PSDT_1067 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PSDT_1066 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PSDT_0642 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PSDT_1124 zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PSDT_0079 putative protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PSDT_0119 putative protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PSDT_1426 putative protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D PSDT_0352 protease K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PSDT_0880 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PSDT_0766 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PSDT_0767 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PSDT_0411 conserved hypothetical protein K07177 K07177; Lon-like protease
D PSDT_0623 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PSDT_0944 putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PSDT_1026 putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 01003 Glycosyltransferases [BR:pdo01003]
D PSDT_1187 putative glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PSDT_1523 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D PSDT_0809 glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D PSDT_1127 conserved hypothetical protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D PSDT_0843 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PSDT_1079 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PSDT_1452 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D PSDT_1451 conserved hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D PSDT_1467 conserved hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D PSDT_0207 putative glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pdo01005]
D PSDT_1469 conserved hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PSDT_1079 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pdo01011]
D PSDT_0258 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PSDT_1237 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PSDT_0639 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PSDT_0636 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PSDT_0261 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PSDT_0620 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PSDT_1191 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PSDT_0635 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PSDT_0638 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PSDT_1539 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D PSDT_0632 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PSDT_1502 putative penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A
D PSDT_0880 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PSDT_1220 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PSDT_1061 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PSDT_1137 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PSDT_1403 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D PSDT_1404 putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D PSDT_0871 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:pdo01004]
D PSDT_1228 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D PSDT_1102 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PSDT_0771 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0775 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0850 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0731 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pdo01008]
D PSDT_0276 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pdo01006]
D PSDT_0733 isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PSDT_0417 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PSDT_0719 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PSDT_1144 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:pdo01007]
D PSDT_0254 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSDT_0517 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSDT_0051 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PSDT_0363 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PSDT_1042 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSDT_1519 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PSDT_1196 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PSDT_0226 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PSDT_0559 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSDT_1145 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PSDT_0745 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSDT_0744 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PSDT_0424 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PSDT_1017 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PSDT_1070 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PSDT_0812 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PSDT_0873 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PSDT_0510 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PSDT_0511 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PSDT_0291 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PSDT_0477 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PSDT_1243 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PSDT_0904 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pdo00194]
D PSDT_1366 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PSDT_1367 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PSDT_1368 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PSDT_1369 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PSDT_1370 ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PSDT_1371 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PSDT_1372 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PSDT_1373 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pdo03000]
D PSDT_0326 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSDT_1107 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSDT_1109 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSDT_1118 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSDT_0401 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PSDT_0230 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PSDT_0094 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D PSDT_1188 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PSDT_0497 putative transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PSDT_1231 conserved hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PSDT_0603 putative transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D PSDT_1442 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D PSDT_0481 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D PSDT_1458 conserved hypothetical protein K07727 K07727; putative transcriptional regulator
D PSDT_0654 conserved hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D PSDT_0954 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PSDT_1541 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSDT_0940 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PSDT_0513 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PSDT_0816 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D PSDT_0627 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D PSDT_0629 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pdo03021]
D PSDT_1314 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PSDT_1301 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PSDT_1300 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PSDT_1298 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PSDT_0735 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PSDT_1357 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PSDT_1215 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PSDT_0293 putative transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D PSDT_0958 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PSDT_0225 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pdo03019]
D PSDT_0287 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D PSDT_0373 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PSDT_1206 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PSDT_1072 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PSDT_0963 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSDT_1020 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PSDT_0225 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PSDT_0091 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PSDT_0464 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSDT_0099 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PSDT_1536 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PSDT_0823 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D PSDT_0792 putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D PSDT_0495 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pdo03011]
D PSDT_0931 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PSDT_0777 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PSDT_1337 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PSDT_0879 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PSDT_1326 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PSDT_0243 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PSDT_1360 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PSDT_1329 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PSDT_1347 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PSDT_1344 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PSDT_1315 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PSDT_1361 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PSDT_1316 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PSDT_1330 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PSDT_1021 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PSDT_0356 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PSDT_1334 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PSDT_0245 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PSDT_1339 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PSDT_0847 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PSDT_0299 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PSDT_1340 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PSDT_1343 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PSDT_1342 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PSDT_1331 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PSDT_1328 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PSDT_0246 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PSDT_1254 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PSDT_0298 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PSDT_1253 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PSDT_1348 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PSDT_1333 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PSDT_1324 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PSDT_1336 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PSDT_1313 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PSDT_1327 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PSDT_1027 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PSDT_0669 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PSDT_0288 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PSDT_1338 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PSDT_1341 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PSDT_1332 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PSDT_0289 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PSDT_0265 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PSDT_1335 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PSDT_1325 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PSDT_1093 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PSDT_0268 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PSDT_1241 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PSDT_1548 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PSDT_0668 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PSDT_1317 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PSDT_0849 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PSDT_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PSDT_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PSDT_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PSDT_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PSDT_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PSDT_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pdo03009]
D PSDT_0373 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PSDT_1072 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PSDT_0852 GTP-binding protein K03595 era; GTPase
D PSDT_0290 GTPase K03979 obgE; GTPase [EC:3.6.5.-]
D PSDT_1357 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PSDT_1215 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PSDT_0293 putative transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D PSDT_1534 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PSDT_1294 putative methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PSDT_0496 conserved hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PSDT_0267 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PSDT_0857 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PSDT_1543 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PSDT_0630 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PSDT_1522 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PSDT_0521 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PSDT_0030 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PSDT_0782 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PSDT_1053 putative ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSDT_0798 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PSDT_0432 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PSDT_0583 putative ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PSDT_0355 putative 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM
D PSDT_0287 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D PSDT_0872 putative endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PSDT_0797 GTP-binding protein K03977 engA; GTPase
D PSDT_0501 GTP-binding protein K03665 hflX; GTPase
D PSDT_1080 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PSDT_0742 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PSDT_1355 ribosome-binding factor K02834 rbfA; ribosome-binding factor A
D PSDT_0528 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D PSDT_0854 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D PSDT_1147 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D PSDT_0968 GTPase K06942 ychF; ribosome-binding ATPase
D PSDT_0269 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pdo03016]
D PSDT_0254 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PSDT_1070 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PSDT_1196 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PSDT_0559 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSDT_1519 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PSDT_1042 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSDT_1145 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PSDT_0745 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSDT_0873 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PSDT_0424 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PSDT_0812 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PSDT_1017 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PSDT_0363 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PSDT_0226 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PSDT_0744 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PSDT_0510 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PSDT_0511 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PSDT_0517 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSDT_0051 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PSDT_1449 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PSDT_0856 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PSDT_0840 putative methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PSDT_1130 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PSDT_1310 tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PSDT_1354 tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PSDT_1080 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PSDT_0719 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PSDT_1547 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PSDT_0279 putative ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PSDT_0763 putative exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PSDT_0650 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PSDT_1496 putative cytidine/deoxycytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PSDT_0718 conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PSDT_0354 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PSDT_1179 putative RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PSDT_0509 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D PSDT_1053 putative ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PSDT_0076 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PSDT_1126 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PSDT_0582 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PSDT_0584 metalloendopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PSDT_0581 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PSDT_1020 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pdo03012]
D PSDT_1356 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PSDT_0667 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PSDT_0778 elongation factor Ts K02357 tsf; elongation factor Ts
D PSDT_1358 elongation factor Tu K02358 tuf; elongation factor Tu
D PSDT_1359 elongation factor G K02355 fusA; elongation factor G
D PSDT_1092 peptide chain release factor K02835 prfA; peptide chain release factor 1
D PSDT_0780 ribosome recycling factor K02838 frr; ribosome recycling factor
D PSDT_1091 putative methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PSDT_0965 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PSDT_1318 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PSDT_1216 elongation factor P K02356 efp; elongation factor P
D PSDT_1065 peptide chain release factor K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:pdo03110]
D PSDT_1039 Clp protease K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PSDT_0472 Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PSDT_0768 ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PSDT_0091 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PSDT_0464 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSDT_0093 chaperone K03686 dnaJ; molecular chaperone DnaJ
D PSDT_0815 chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D PSDT_0092 chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PSDT_0681 conserved hypothetical protein K13993 HSP20; HSP20 family protein
D PSDT_1244 co-chaperonin GroES K04078 groES; chaperonin GroES
D PSDT_1124 zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PSDT_1373 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PSDT_1426 putative protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D PSDT_1076 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSDT_1427 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D PSDT_0346 thioredoxin K03671 TXN; thioredoxin
D PSDT_1044 conserved hypothetical protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:pdo04131]
D PSDT_0284 conserved hypothetical protein K07192 FLOT; flotillin
D PSDT_0651 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSDT_1143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PSDT_0927 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:pdo04121]
D PSDT_1159 conserved hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:pdo03051]
D PSDT_1162 putative ATPase K13527 mpa; proteasome-associated ATPase
D PSDT_1158 conserved hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D PSDT_1161 conserved hypothetical protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:pdo03032]
D PSDT_1170 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PSDT_0447 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PSDT_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PSDT_1446 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PSDT_0622 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PSDT_0142 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0244 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1068 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSDT_0003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSDT_0562 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSDT_0126 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSDT_0646 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSDT_0111 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSDT_1025 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PSDT_0985 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PSDT_0074 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_0149 hypothetical phage protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_0007 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PSDT_0737 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PSDT_0006 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PSDT_0736 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PSDT_0124 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pdo03036]
D PSDT_0373 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PSDT_0284 conserved hypothetical protein K07192 FLOT; flotillin
D PSDT_0447 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PSDT_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PSDT_1419 conserved hypothetical protein K04047 dps; starvation-inducible DNA-binding protein
D PSDT_0644 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D PSDT_0679 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D PSDT_0680 conserved hypothetical protein K06024 scpB; segregation and condensation protein B
D PSDT_1064 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PSDT_0632 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PSDT_1262 putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PSDT_0720 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PSDT_0953 conserved hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PSDT_0379 putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PSDT_0640 cell division protein K03589 ftsQ; cell division protein FtsQ
D PSDT_0637 putative cell division protein K03588 ftsW; cell division protein FtsW
D PSDT_1063 cell division protein K09811 ftsX; cell division transport system permease protein
D PSDT_0426 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PSDT_0427 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D PSDT_1542 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PSDT_0156 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PSDT_0180 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PSDT_0678 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PSDT_1541 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PSDT_1543 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PSDT_0689 tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D PSDT_0673 recombinase K04763 xerD; integrase/recombinase XerD
D PSDT_0984 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PSDT_0368 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PSDT_0822 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pdo03400]
D PSDT_0459 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PSDT_1178 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PSDT_0228 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PSDT_0580 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PSDT_0741 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PSDT_0710 putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PSDT_0985 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PSDT_0825 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PSDT_0906 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D PSDT_0929 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PSDT_0824 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PSDT_0409 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_0881 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_1210 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PSDT_1301 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PSDT_1300 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PSDT_1314 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PSDT_1298 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PSDT_0964 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PSDT_0489 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PSDT_0488 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PSDT_0433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PSDT_0003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PSDT_0562 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PSDT_0126 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PSDT_0646 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PSDT_0111 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PSDT_0142 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0244 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1068 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0074 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_0149 hypothetical phage protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_1463 putative endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PSDT_0725 recombinase RecA K03553 recA; recombination protein RecA
D PSDT_0806 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PSDT_0805 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PSDT_0807 holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PSDT_1296 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PSDT_1176 DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D PSDT_0004 recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D PSDT_1456 conserved hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PSDT_0266 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PSDT_0416 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PSDT_0113 recombination protein RecR K06187 recR; recombination protein RecR
D PSDT_0523 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PSDT_0389 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1
D PSDT_1095 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1
D PSDT_0007 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PSDT_0737 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PSDT_0006 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PSDT_0736 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PSDT_0124 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PSDT_0447 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PSDT_1232 putative DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PSDT_0945 putative DNA polymerase K03502 umuC; DNA polymerase V
D PSDT_0944 putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PSDT_0623 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PSDT_0726 putative regulatory protein K03565 recX; regulatory protein
D PSDT_0892 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PSDT_0098 conserved hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
C 03029 Mitochondrial biogenesis [BR:pdo03029]
D PSDT_1356 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PSDT_0667 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PSDT_0778 elongation factor Ts K02357 tsf; elongation factor Ts
D PSDT_1358 elongation factor Tu K02358 tuf; elongation factor Tu
D PSDT_1359 elongation factor G K02355 fusA; elongation factor G
D PSDT_0852 GTP-binding protein K03595 era; GTPase
D PSDT_0517 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PSDT_0559 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PSDT_0745 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PSDT_0424 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PSDT_1042 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PSDT_1032 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PSDT_1031 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PSDT_1033 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PSDT_0142 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0244 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PSDT_1068 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PSDT_0091 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PSDT_0092 chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PSDT_0464 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSDT_1244 co-chaperonin GroES K04078 groES; chaperonin GroES
D PSDT_0093 chaperone K03686 dnaJ; molecular chaperone DnaJ
D PSDT_0815 chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D PSDT_0984 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PSDT_1545 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pdo02000]
D PSDT_0235 ABC transporter ATP-binding and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0236 ABC transporter ATP-binding and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_1433 ABC transporter ATP-binding component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0842 putative ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_1434 ABC transporter ATP-binding component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0841 putative ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PSDT_0828 putative ABC transporter ATP-binding component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PSDT_0462 putative ABC transporter ATP-binding component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PSDT_0442 ABC transporter ATP-binding component K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D PSDT_0370 ABC transporter ATP-binding component K15738 uup; ABC transport system ATP-binding/permease protein
D PSDT_1292 putative nitrate/sulfonate/bicarbonate ABC transporter permease component K05845 opuC; osmoprotectant transport system substrate-binding protein
D PSDT_1291 putative glycine betaine/L-proline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PSDT_1041 putative ABC transporter substrate binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PSDT_0026 ABC transporter ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PSDT_1082 ABC transporter substrate binding component K25086 musE; maltose transport system substrate-binding protein
D PSDT_1084 oligosaccharide ABC transporter permease component K25087 musF; maltose transport system permease protein
D PSDT_1083 oligosaccharide ABC transporter permease component K25088 musG; maltose transport system permease protein
D PSDT_1089 putative ABC transporter substrate binding component K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PSDT_1088 putative ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PSDT_1087 putative ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PSDT_1493 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PSDT_1492 sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PSDT_1491 sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PSDT_0981 putative ABC transporter substrate binding component K10240 cebE; cellobiose transport system substrate-binding protein
D PSDT_0980 putative ABC transporter permease component K10241 cebF; cellobiose transport system permease protein
D PSDT_0979 putative ABC transporter permease component K10242 cebG; cellobiose transport system permease protein
D PSDT_1003 ABC transporter substrate binding component K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D PSDT_1002 putative ABC transporter permease component K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D PSDT_1001 ABC transporter permease component K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D PSDT_0318 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein
D PSDT_1113 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein
D PSDT_0320 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein
D PSDT_1112 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein
D PSDT_0321 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein
D PSDT_1111 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein
D PSDT_0404 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein
D PSDT_0403 ribose ABC transporter permease component K10440 rbsC; ribose transport system permease protein
D PSDT_0402 ribose ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PSDT_1172 ABC transporter permease component K02069 STAR2; UDP-glucose/iron transport system permease protein
D PSDT_1174 putative truncated ABC transporter ATP-binding component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D PSDT_0231 putative ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PSDT_0309 putative ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PSDT_0302 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PSDT_1106 putative ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PSDT_0232 putative ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D PSDT_0300 sugar ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D PSDT_0310 putative ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D PSDT_1105 ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D PSDT_0233 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PSDT_0301 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PSDT_0311 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PSDT_1104 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PSDT_0341 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein
D PSDT_0342 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein
D PSDT_0343 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PSDT_0558 putative ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein
D PSDT_0663 glutamate ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein
D PSDT_0664 glutamate ABC transporter permease component K10006 gluC; glutamate transport system permease protein
D PSDT_0665 glutamate ABC transporter permease component K10007 gluD; glutamate transport system permease protein
D PSDT_0662 glutamate ABC transporter ATP-binding component K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D PSDT_1303 putative truncated ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PSDT_1219 putative metal ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein
D PSDT_1217 putative metal ABC transporter permease component K02072 metI; D-methionine transport system permease protein
D PSDT_1218 putative metal ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein
D PSDT_1059 putative ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PSDT_1058 putative ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D PSDT_1057 putative ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PSDT_0685 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0690 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D PSDT_0686 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein
D PSDT_0687 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein
D PSDT_0688 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D PSDT_0674 dipeptide/oligopeptide ABC transporter substrate binding component K13889 gsiB; glutathione transport system substrate-binding protein
D PSDT_0677 dipeptide/oligopeptide ABC transporter permease component K13890 gsiC; glutathione transport system permease protein
D PSDT_0676 dipeptide/oligopeptide ABC transporter permease component K13891 gsiD; glutathione transport system permease protein
D PSDT_0675 dipeptide/oligopeptide ABC transporter ATP-binding component K13892 gsiA; glutathione transport system ATP-binding protein
D PSDT_0615 peptides ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PSDT_0616 peptides ABC transporter substrate binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PSDT_0617 peptides ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PSDT_0618 peptides ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PSDT_1425 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PSDT_1048 ABC transporter ATP-binding component K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D PSDT_0971 ABC transporter ATP-binding component K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D PSDT_0972 conserved hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D PSDT_0933 ABC transporter substrate binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PSDT_0935 ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PSDT_0934 ABC transporter ATP-binding component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PSDT_0753 putative ABC transporter permease component K11051 cylB; multidrug/hemolysin transport system permease protein
D PSDT_0754 putative ABC transporter ATP-binding component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D PSDT_1063 cell division protein K09811 ftsX; cell division transport system permease protein
D PSDT_1064 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PSDT_1311 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_1362 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_1363 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_1454 ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_1401 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_1439 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_0297 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PSDT_1312 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_1364 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_1453 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_1400 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_1438 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_0296 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_0885 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PSDT_0034 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PSDT_0035 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PSDT_0444 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PSDT_0532 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PSDT_0033 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSDT_1234 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSDT_0533 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSDT_0443 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSDT_0474 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PSDT_0865 putative ABC transporter ATP-binding component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PSDT_0048 putative multidrug transport protein K26937 dinF; MATE family, multidrug efflux pump
D PSDT_1116 putative transport protein K06610 iolF; MFS transporter, SP family, inositol transporter
D PSDT_0671 putative fucose transport protein K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PSDT_0995 conserved hypothetical protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D PSDT_1378 conserved hypothetical protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PSDT_0438 putative truncated transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D PSDT_0652 putative PTS system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PSDT_0653 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PSDT_0655 PTS system glucose-specific IIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PSDT_0799 conserved hypothetical protein K06188 aqpZ; aquaporin Z
D PSDT_0161 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PSDT_0476 potassium transport protein K10716 kch; voltage-gated potassium channel
D PSDT_0454 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D PSDT_1022 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PSDT_0557 putative magnesium and cobalt transport protein K03284 corA; magnesium transporter
D PSDT_0085 conserved hypothetical protein K06199 crcB; fluoride exporter
D PSDT_0086 conserved hypothetical protein K06199 crcB; fluoride exporter
D PSDT_1418 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSDT_0853 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSDT_0329 galactoside transport protein K16209 lacS; lactose/raffinose/galactose permease
D PSDT_0534 amino acid transport protein K11733 lysP; lysine-specific permease
D PSDT_0205 amino acid transport protein K16235 mmuP; S-methylmethionine transporter
D PSDT_0999 putative glucose uptake protein K05340 glcU; glucose uptake protein
D PSDT_1441 putative transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PSDT_0587 putative Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D PSDT_0837 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PSDT_0344 putative transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D PSDT_1149 nucleoside transport protein K16323 yxjA; purine nucleoside transport protein
D PSDT_0765 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family
D PSDT_0082 putative voltage gated channel protein K03281 clcA; chloride channel protein, CIC family
D PSDT_1539 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D PSDT_0166 putative transport protein K13936 mdcF; malonate transporter and related proteins
D PSDT_0053 potassium transport protein K03549 kup; KUP system potassium uptake protein
D PSDT_1047 conserved hypothetical protein K23675 fmnP; riboflavin transporter
D PSDT_0637 putative cell division protein K03588 ftsW; cell division protein FtsW
D PSDT_0038 conserved hypothetical protein K07243 FTR; high-affinity iron transporter
D PSDT_0037 conserved hypothetical protein K07230 p19; periplasmic iron binding protein
D PSDT_1081 conserved hypothetical protein K25089 musI; membrane protein
C 02044 Secretion system [BR:pdo02044]
D PSDT_0870 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PSDT_0105 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PSDT_0106 conserved hypothetical protein K12510 tadB; tight adherence protein B
D PSDT_0428 conserved hypothetical protein K02221 yggT; YggT family protein
D PSDT_0560 conserved hypothetical protein K02237 comEA; competence protein ComEA
D PSDT_0561 conserved hypothetical protein K02238 comEC; competence protein ComEC
D PSDT_1388 truncated conserved hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PSDT_0141 conserved hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PSDT_1269 conserved hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PSDT_0728 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PSDT_0292 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PSDT_0819 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PSDT_1323 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PSDT_0362 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PSDT_0047 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor
D PSDT_0804 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D PSDT_1545 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:pdo02042]
D PSDT_1418 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSDT_0853 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PSDT_0957 conserved hypothetical protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pdo02022]
D PSDT_1140 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PSDT_0468 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PSDT_0467 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PSDT_0956 two-component sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D PSDT_0924 two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:pdo02035]
D PSDT_0870 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PSDT_0105 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pdo04812]
D PSDT_0426 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PSDT_1542 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PSDT_0156 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PSDT_0180 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PSDT_0678 conserved hypothetical protein K03496 parA; chromosome partitioning protein
D PSDT_1541 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pdo04147]
D PSDT_0963 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PSDT_0651 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PSDT_0821 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PSDT_0927 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PSDT_1076 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PSDT_0284 conserved hypothetical protein K07192 FLOT; flotillin
D PSDT_0464 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PSDT_0091 chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PSDT_0222 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PSDT_0773 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PSDT_1077 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PSDT_1358 elongation factor Tu K02358 tuf; elongation factor Tu
D PSDT_0856 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PSDT_0502 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PSDT_0771 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0775 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_0850 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PSDT_1157 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PSDT_1322 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PSDT_0803 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PSDT_0515 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PSDT_0514 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PSDT_0997 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PSDT_1184 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PSDT_0941 glycosyl hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PSDT_0494 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0977 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PSDT_0801 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PSDT_0974 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PSDT_0062 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PSDT_0820 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PSDT_1143 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pdo02048]
D PSDT_0389 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1
D PSDT_1095 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1
D PSDT_1094 CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2
D PSDT_1100 CRISPR-associated helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PSDT_1096 CRISPR-associated protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PSDT_1098 CRISPR-associated protein K19117 csd1; CRISPR-associated protein Csd1
D PSDT_1097 CRISPR-associated protein K19118 csd2; CRISPR-associated protein Csd2
D PSDT_1099 CRISPR-associated protein K19119 cas5d; CRISPR-associated protein Cas5d
D PSDT_1465 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PSDT_0194 conserved hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PSDT_0074 methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_0149 hypothetical phage protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PSDT_0075 putative DNA methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PSDT_0202 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D PSDT_0914 conserved hypothetical protein K19165 phd; antitoxin Phd
D PSDT_0426 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PSDT_0254 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pdo01504]
D PSDT_1378 conserved hypothetical protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pdo03100]
D PSDT_tRNA45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSDT_tRNA15 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSDT_tRNA44 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PSDT_tRNA13 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA28 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PSDT_tRNA18 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PSDT_tRNA34 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PSDT_tRNA22 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PSDT_tRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSDT_tRNA08 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PSDT_tRNA07 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSDT_tRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PSDT_tRNA03 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSDT_tRNA23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSDT_tRNA30 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PSDT_tRNA17 tRNA-His K14226 tRNA-His; tRNA His
D PSDT_tRNA43 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PSDT_tRNA02 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA24 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PSDT_tRNA04 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSDT_tRNA05 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PSDT_tRNA42 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSDT_tRNA32 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSDT_tRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D PSDT_tRNA35 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PSDT_tRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSDT_tRNA25 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSDT_tRNA36 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PSDT_tRNA37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA41 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PSDT_tRNA01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSDT_tRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSDT_tRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PSDT_tRNA11 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PSDT_tRNA40 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PSDT_tRNA20 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSDT_tRNA12 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSDT_tRNA21 tRNA-Val K14237 tRNA-Val; tRNA Val
D PSDT_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PSDT_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PSDT_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PSDT_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PSDT_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PSDT_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PSDT_1009 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D PSDT_1299 conserved hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PSDT_0096 conserved hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PSDT_0303 putative dehydrogenase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PSDT_1209 putative reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PSDT_1289 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PSDT_1163 bifunctional methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D PSDT_0898 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PSDT_0078 putative ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PSDT_1413 ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PSDT_0762 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PSDT_0896 conserved hypothetical protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PSDT_0783 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PSDT_0039 conserved hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PSDT_0994 conserved hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PSDT_0838 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PSDT_1202 conserved hypothetical protein K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D PSDT_0529 conserved hypothetical protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D PSDT_0377 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PSDT_0839 putative phosphoglycerate K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PSDT_0052 putative DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PSDT_0445 conserved hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D PSDT_1007 glycosyl hydrolase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D PSDT_0776 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PSDT_1203 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PSDT_0209 conserved hypothetical protein K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D PSDT_0458 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PSDT_1054 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PSDT_0959 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D PSDT_0275 conserved hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D PSDT_0897 copper-transporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PSDT_0040 cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PSDT_0500 cation-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PSDT_0095 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D PSDT_0714 putative cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PSDT_0863 conserved hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PSDT_0478 conserved hypothetical protein K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PSDT_0163 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PSDT_1533 conserved hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB
D PSDT_0345 conserved hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D PSDT_1430 conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D PSDT_1056 oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D PSDT_1429 putative NADPH-dependent reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PSDT_0045 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PSDT_0469 cold shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D PSDT_0764 trigger factor K03545 tig; trigger factor
D PSDT_1060 SsrA-binding protein K03664 smpB; SsrA-binding protein
D PSDT_0594 conserved hypothetical protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D PSDT_0595 conserved hypothetical protein K07460 yraN; putative endonuclease
D PSDT_0592 conserved hypothetical protein K04096 smf; DNA processing protein
D PSDT_0758 recombination factor protein RarA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PSDT_1479 aromatic amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D PSDT_1481 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family
D PSDT_1240 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PSDT_1197 branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D PSDT_1544 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein
D PSDT_0566 putative phage recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D PSDT_0683 GTP-binding protein K06207 typA; GTP-binding protein
D PSDT_1180 conserved hypothetical protein K07166 K07166; ACT domain-containing protein
D PSDT_0855 putative phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D PSDT_0571 putative truncated phage endolysin K07273 acm; lysozyme
D PSDT_0570 putative truncated phage endolysin K07273 acm; lysozyme
C 99994 Others
D PSDT_1141 two-component response regulator K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PSDT_0711 putative acyltransferase K02348 elaA; ElaA protein
D PSDT_1086 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PSDT_0867 putative ABC transporter permease component K09014 sufB; Fe-S cluster assembly protein SufB
D PSDT_0866 putative ABC transporter permease component K09015 sufD; Fe-S cluster assembly protein SufD
D PSDT_1319 conserved hypothetical protein K03744 lemA; LemA protein
D PSDT_0285 conserved hypothetical protein K03744 lemA; LemA protein
D PSDT_1524 conserved hypothetical protein K03975 dedA; membrane-associated protein
D PSDT_0069 conserved hypothetical protein K01421 yhgE; putative membrane protein
D PSDT_0070 conserved hypothetical protein K01421 yhgE; putative membrane protein
D PSDT_0084 conserved hypothetical protein K08972 K08972; putative membrane protein
D PSDT_0709 conserved hypothetical protein K08987 K08987; putative membrane protein
C 99997 Function unknown
D PSDT_1437 conserved hypothetical protein K06871 K06871; uncharacterized protein
D PSDT_0827 hypothetical protein K06871 K06871; uncharacterized protein
D PSDT_0283 conserved hypothetical protein K06872 K06872; uncharacterized protein
D PSDT_0286 conserved hypothetical protein K06872 K06872; uncharacterized protein
D PSDT_1115 putative hydrolase K06889 K06889; uncharacterized protein
D PSDT_0716 conserved hypothetical protein K06890 K06890; uncharacterized protein
D PSDT_0064 conserved hypothetical protein K06950 K06950; uncharacterized protein
D PSDT_0493 phosphohydrolase K06950 K06950; uncharacterized protein
D PSDT_0357 conserved hypothetical protein K06960 K06960; uncharacterized protein
D PSDT_0170 putative truncated dehydrogenase K07124 K07124; uncharacterized protein
D PSDT_0697 dehydrogenase K07124 K07124; uncharacterized protein
D PSDT_0072 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PSDT_0367 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PSDT_1546 conserved hypothetical protein K08998 K08998; uncharacterized protein
D PSDT_0961 conserved hypothetical protein K09009 K09009; uncharacterized protein
D PSDT_1181 conserved hypothetical protein K09157 K09157; uncharacterized protein
D PSDT_0886 hypothetical protein K09167 K09167; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024