+D GENES KO
#
KEGG Orthology (KO) - Peptoniphilus sp. ING2-D1G
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ped00010]
D ING2D1G_1196 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ING2D1G_0620 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_1184 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ING2D1G_1186 gapB; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ING2D1G_1185 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ING2D1G_1183 gpmI; Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ING2D1G_1182 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ING2D1G_1580 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ING2D1G_0640 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D ING2D1G_0408 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1204 nifJ3; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0818 nifJ1; Pyruvate dehydrogenase (NADP(+)) K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_1205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:ped00020]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_0868 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D ING2D1G_1240 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D ING2D1G_0408 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D ING2D1G_1204 nifJ3; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0818 nifJ1; Pyruvate dehydrogenase (NADP(+)) K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ped00030]
D ING2D1G_1196 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ING2D1G_0600 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ING2D1G_0333 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ING2D1G_0619 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D ING2D1G_0498 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ING2D1G_0669 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ING2D1G_1079 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_0620 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ped00040]
D ING2D1G_1548 SAF_AH_GD K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D ING2D1G_1549 altronate hydrolase (Altronic acid hydratase) K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D ING2D1G_0568 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D ING2D1G_0600 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ped00051]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ING2D1G_0620 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D ING2D1G_0634 putative Fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_1184 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ING2D1G_0498 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ped00052]
D ING2D1G_0568 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ped00500]
D ING2D1G_0568 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ING2D1G_1196 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ped00520]
D ING2D1G_0835 glmS; Glutamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ING2D1G_1355 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D ING2D1G_1080 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D ING2D1G_1283 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ING2D1G_1397 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ING2D1G_1411 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ING2D1G_0568 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D ING2D1G_1196 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:ped00620]
D ING2D1G_1204 nifJ3; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0818 nifJ1; Pyruvate dehydrogenase (NADP(+)) K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0408 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_0664 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ING2D1G_1166 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ING2D1G_1580 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ING2D1G_1344 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D ING2D1G_1347 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D ING2D1G_1346 accC1; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D ING2D1G_1345 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_1205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ING2D1G_1543 putative D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D ING2D1G_1350 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D ING2D1G_0878 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D ING2D1G_1503 metallo-beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D ING2D1G_0325 ytsJ; Malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D ING2D1G_0482 pycB; Pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D ING2D1G_1321 gcdB1; Na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1425 gcdB3; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1240 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D ING2D1G_0868 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D ING2D1G_0640 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1362 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ped00630]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1450 2-Hacid_dh_4 K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D ING2D1G_0427 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D ING2D1G_0508 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ING2D1G_0646 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1257 glycerate kinase subfamily protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:ped00640]
D ING2D1G_0664 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ING2D1G_1166 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1407 bcd5; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1009 bcd1; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1344 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D ING2D1G_1347 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D ING2D1G_1346 accC1; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D ING2D1G_1345 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D ING2D1G_1205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:ped00650]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1408 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ING2D1G_1409 crt; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D ING2D1G_1407 bcd5; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1009 bcd1; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1131 bdhA; NADH-dependent butanol dehydrogenase A K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D ING2D1G_1422 gcdA; Glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D ING2D1G_1321 gcdB1; Na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1425 gcdB3; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1426 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ING2D1G_1427 Hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D ING2D1G_1424 gctA; Glutaconate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D ING2D1G_1423 gctB; Glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D ING2D1G_1210 abfD; 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D ING2D1G_1204 nifJ3; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0818 nifJ1; Pyruvate dehydrogenase (NADP(+)) K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_1217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ING2D1G_1216 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ped00660]
D ING2D1G_1217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ING2D1G_1216 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ING2D1G_0349 dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D ING2D1G_1361 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D ING2D1G_1360 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D ING2D1G_1359 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D ING2D1G_1184 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ped00190]
D ING2D1G_0142 atpA; V-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D ING2D1G_0143 atpB; V-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D ING2D1G_0140 V-type sodium ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D ING2D1G_0144 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D ING2D1G_0139 V-type proton ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D ING2D1G_0141 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D ING2D1G_0136 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D ING2D1G_0137 putative V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D ING2D1G_0138 V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D ING2D1G_0051 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ped00710]
D ING2D1G_1185 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ING2D1G_1186 gapB; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_0620 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D ING2D1G_0333 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D ING2D1G_0498 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D ING2D1G_1184 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D ING2D1G_0600 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D ING2D1G_0619 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
C 00720 Other carbon fixation pathways [PATH:ped00720]
D ING2D1G_1204 nifJ3; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0818 nifJ1; Pyruvate dehydrogenase (NADP(+)) K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D ING2D1G_0640 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D ING2D1G_1240 pyc; Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D ING2D1G_0868 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D ING2D1G_1210 abfD; 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1344 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D ING2D1G_1347 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D ING2D1G_1346 accC1; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D ING2D1G_1345 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D ING2D1G_0163 fhs; Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D ING2D1G_1462 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D ING2D1G_0164 fchA; Formiminotetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D ING2D1G_1166 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ING2D1G_0664 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:ped00680]
D ING2D1G_1450 2-Hacid_dh_4 K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D ING2D1G_1182 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_0620 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ING2D1G_0664 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D ING2D1G_1166 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ING2D1G_0640 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D ING2D1G_1183 gpmI; Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ING2D1G_1581 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0036 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0180 serA3; D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0487 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0181 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:ped00910]
D ING2D1G_1506 hcp; Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D ING2D1G_1340 2-nitropropane dioxygenase family oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D ING2D1G_1322 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D ING2D1G_0508 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ING2D1G_0366 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ING2D1G_0945 arcC; Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:ped00920]
D ING2D1G_0794 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D ING2D1G_1126 pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ING2D1G_0311 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ped00061]
D ING2D1G_1344 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D ING2D1G_1347 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D ING2D1G_1346 accC1; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D ING2D1G_1345 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D ING2D1G_1348 hypothetical protein K02078 acpP; acyl carrier protein
D ING2D1G_0907 hypothetical protein K02078 acpP; acyl carrier protein
D ING2D1G_1339 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ING2D1G_1343 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D ING2D1G_1337 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ING2D1G_0567 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1338 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1294 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_0430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1336 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ING2D1G_1342 fabK3; enoyl-[acyl carrier protein] reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ped00071]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1407 bcd5; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1009 bcd1; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ped00561]
D ING2D1G_1257 glycerate kinase subfamily protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_0549 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D ING2D1G_0908 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D ING2D1G_0809 glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ING2D1G_0268 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ING2D1G_0974 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ING2D1G_0519 Diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ING2D1G_1292 diacylglycerol kinase catalytic subunit K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ING2D1G_0384 glycosyl transferase, group 1 family K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D ING2D1G_1442 Glycosyl transferases K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
C 00564 Glycerophospholipid metabolism [PATH:ped00564]
D ING2D1G_0808 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D ING2D1G_0809 glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ING2D1G_0268 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D ING2D1G_0974 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ING2D1G_0519 Diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ING2D1G_1292 diacylglycerol kinase catalytic subunit K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D ING2D1G_0860 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D ING2D1G_0786 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D ING2D1G_1226 clsA; Major cardiolipin synthase ClsA K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D ING2D1G_0241 putative arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ped00230]
D ING2D1G_0258 mutT3; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D ING2D1G_1079 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D ING2D1G_1319 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D ING2D1G_1317 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D ING2D1G_1315 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D ING2D1G_1318 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D ING2D1G_0845 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D ING2D1G_1558 purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D ING2D1G_1316 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ING2D1G_0433 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D ING2D1G_1448 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D ING2D1G_0259 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D ING2D1G_0081 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D ING2D1G_1068 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D ING2D1G_0605 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ING2D1G_0335 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D ING2D1G_1267 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D ING2D1G_0588 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D ING2D1G_1154 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ING2D1G_0966 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D ING2D1G_0880 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D ING2D1G_0050 Hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D ING2D1G_0639 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D ING2D1G_0229 ushA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D ING2D1G_1099 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D ING2D1G_0135 Hypothetical protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D ING2D1G_1060 Amidohydrolase K01466 allB; allantoinase [EC:3.5.2.5]
D ING2D1G_1059 Amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D ING2D1G_0945 arcC; Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ped00240]
D ING2D1G_0552 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D ING2D1G_0553 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D ING2D1G_1460 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D ING2D1G_0555 pyrD; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D ING2D1G_0554 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D ING2D1G_1019 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D ING2D1G_1020 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D ING2D1G_0863 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D ING2D1G_0238 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D ING2D1G_0509 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D ING2D1G_0267 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D ING2D1G_1448 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D ING2D1G_1413 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D ING2D1G_0801 pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D ING2D1G_0229 ushA; 5'-nucleotidase/2',3'-cyclic phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D ING2D1G_0260 pdp; Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D ING2D1G_0973 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D ING2D1G_1154 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D ING2D1G_1305 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D ING2D1G_1033 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D ING2D1G_0789 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ING2D1G_0513 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ped00250]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_0892 asnA; Aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D ING2D1G_0124 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D ING2D1G_0563 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ING2D1G_0564 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ING2D1G_0552 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D ING2D1G_0553 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D ING2D1G_0366 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D ING2D1G_1322 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D ING2D1G_0508 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ING2D1G_1128 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D ING2D1G_0835 glmS; Glutamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ING2D1G_1319 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ped00260]
D ING2D1G_0500 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0358 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0495 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ING2D1G_0496 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ING2D1G_0370 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D ING2D1G_0369 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D ING2D1G_1445 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D ING2D1G_1450 2-Hacid_dh_4 K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D ING2D1G_1257 glycerate kinase subfamily protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D ING2D1G_1183 gpmI; Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D ING2D1G_1581 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0036 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0180 serA3; D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0487 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0181 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D ING2D1G_0646 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1458 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D ING2D1G_1459 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D ING2D1G_1213 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ING2D1G_0842 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:ped00270]
D ING2D1G_1126 pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D ING2D1G_1577 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ING2D1G_1390 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D ING2D1G_0081 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D ING2D1G_0839 mtaD; ATZ_TRZ_like K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D ING2D1G_0500 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0358 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0495 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ING2D1G_0496 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ING2D1G_0311 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D ING2D1G_0310 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D ING2D1G_1212 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ING2D1G_0464 glutamate-cysteine ligase family 2(GCS2) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_1205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ING2D1G_1458 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D ING2D1G_1459 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D ING2D1G_1581 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0036 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0180 serA3; D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0487 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0181 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ped00280]
D ING2D1G_1212 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1407 bcd5; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1009 bcd1; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ped00290]
D ING2D1G_1213 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ING2D1G_0842 Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D ING2D1G_1361 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D ING2D1G_1360 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D ING2D1G_1359 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D ING2D1G_1217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ING2D1G_1216 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ING2D1G_1215 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ING2D1G_1214 ilvD3; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ING2D1G_1010 ilvD1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ING2D1G_1212 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ING2D1G_1362 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ped00300]
D ING2D1G_0496 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D ING2D1G_0500 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0358 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0495 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ING2D1G_0501 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ING2D1G_0502 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D ING2D1G_1603 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D ING2D1G_1142 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D ING2D1G_0503 ddh; diaminopimelate D-dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D ING2D1G_0876 putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ING2D1G_0419 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ped00310]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ped00220]
D ING2D1G_0946 arcB; Ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D ING2D1G_0563 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ING2D1G_0564 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ING2D1G_0947 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D ING2D1G_1128 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D ING2D1G_0508 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ING2D1G_0945 arcC; Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D ING2D1G_1322 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:ped00330]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_0115 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_0625 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_0021 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D ING2D1G_0367 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D ING2D1G_0368 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ped00340]
D ING2D1G_1263 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ING2D1G_1161 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D ING2D1G_0106 uroc1; putative urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D ING2D1G_0104 hutI2; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D ING2D1G_0117 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D ING2D1G_0052 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D ING2D1G_0116 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D ING2D1G_0162 ftcd; Glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ped00350]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_1263 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:ped00360]
D ING2D1G_1180 Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D ING2D1G_1408 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_1263 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ING2D1G_0115 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_0625 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:ped00380]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_0115 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_0625 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ped00400]
D ING2D1G_1472 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D ING2D1G_1470 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D ING2D1G_1465 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D ING2D1G_1469 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D ING2D1G_1468 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D ING2D1G_1467 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D ING2D1G_1471 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_1263 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ped00410]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D ING2D1G_1407 bcd5; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D ING2D1G_1009 bcd1; Acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ped00430]
D ING2D1G_0067 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D ING2D1G_1322 NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D ING2D1G_1166 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D ING2D1G_0664 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D ING2D1G_1557 type I phosphodiesterase/nucleotide pyrophosphatase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
C 00450 Selenocompound metabolism [PATH:ped00450]
D ING2D1G_1577 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ING2D1G_0758 Cysteine desulfurase 2, chloroplastic K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D ING2D1G_1393 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D ING2D1G_1151 metG; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ped00460]
D ING2D1G_0067 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D ING2D1G_0892 asnA; Aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:ped00470]
D ING2D1G_0902 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ING2D1G_0420 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ING2D1G_1128 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D ING2D1G_1266 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ING2D1G_1376 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ING2D1G_0577 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ING2D1G_1602 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D ING2D1G_1433 L-Ala-DL-Glu_epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D ING2D1G_1142 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D ING2D1G_0166 hypothetical protein K01780 cntK; histidine racemase [EC:5.1.1.24]
C 00480 Glutathione metabolism [PATH:ped00480]
D ING2D1G_0067 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D ING2D1G_1328 Lactam utilization protein B K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D ING2D1G_0464 glutamate-cysteine ligase family 2(GCS2) K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D ING2D1G_0094 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ING2D1G_0829 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ped00542]
D ING2D1G_1412 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ped00541]
D ING2D1G_0568 gtaB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D ING2D1G_1080 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D ING2D1G_1411 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:ped00550]
D ING2D1G_1283 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ING2D1G_1397 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ING2D1G_0823 murC; UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D ING2D1G_0577 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ING2D1G_0876 putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ING2D1G_0420 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ING2D1G_0419 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D ING2D1G_0861 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D ING2D1G_0123 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ING2D1G_1000 pgpB; membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ING2D1G_0576 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ING2D1G_0579 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ING2D1G_0282 penicillin-binding protein 1A (PBP1a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ING2D1G_0575 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ING2D1G_0616 ftsI; cell division protein FtsI/penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D ING2D1G_0160 putative D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ING2D1G_0472 putative transglycosylase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
C 00552 Teichoic acid biosynthesis [PATH:ped00552]
D ING2D1G_0123 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ING2D1G_1000 pgpB; membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ING2D1G_1412 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D ING2D1G_0332 tagA; Glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D ING2D1G_0132 putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ING2D1G_0397 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D ING2D1G_0384 glycosyl transferase, group 1 family K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ped00543]
D ING2D1G_1412 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ped00730]
D ING2D1G_0761 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0737 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0738 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ING2D1G_0599 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D ING2D1G_1560 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D ING2D1G_0601 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D ING2D1G_1099 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ped00740]
D ING2D1G_0425 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ING2D1G_0423 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ING2D1G_0426 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D ING2D1G_0424 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D ING2D1G_0792 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D ING2D1G_0258 mutT3; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ped00750]
D ING2D1G_0181 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D ING2D1G_0369 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ped00760]
D ING2D1G_1332 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D ING2D1G_0259 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D ING2D1G_1448 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D ING2D1G_0395 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D ING2D1G_0475 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D ING2D1G_0042 pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D ING2D1G_0651 cobB2; NAD-dependent protein deacetylase 2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D ING2D1G_0516 ppnK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ped00770]
D ING2D1G_1217 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D ING2D1G_1216 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D ING2D1G_1215 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D ING2D1G_1214 ilvD3; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ING2D1G_1010 ilvD1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D ING2D1G_0284 coaX3; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D ING2D1G_0025 coaX1; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D ING2D1G_0590 Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D ING2D1G_0661 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D ING2D1G_0365 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D ING2D1G_1212 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ped00780]
D ING2D1G_1337 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ING2D1G_0567 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1338 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1294 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_0430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1336 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ING2D1G_1195 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ped00785]
D ING2D1G_0410 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_0408 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D ING2D1G_0646 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
C 00790 Folate biosynthesis [PATH:ped00790]
D ING2D1G_0962 putative conserved protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D ING2D1G_1560 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D ING2D1G_0069 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D ING2D1G_0836 tetrahydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D ING2D1G_0425 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D ING2D1G_0353 Metallo-beta-lactamase superfamily K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:ped00670]
D ING2D1G_0163 fhs; Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D ING2D1G_1462 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D ING2D1G_0164 fchA; Formiminotetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D ING2D1G_1317 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D ING2D1G_1316 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ING2D1G_0116 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D ING2D1G_0162 ftcd; Glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D ING2D1G_0593 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D ING2D1G_0646 Glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D ING2D1G_0513 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D ING2D1G_0319 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ped00860]
D ING2D1G_1272 hypothetical protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D ING2D1G_0642 Hypothetical protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D ING2D1G_1444 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ped00900]
D ING2D1G_0617 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D ING2D1G_0488 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D ING2D1G_0618 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D ING2D1G_0858 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1394 fni; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D ING2D1G_0255 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D ING2D1G_0861 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D ING2D1G_0333 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D ING2D1G_1600 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:ped00332]
D ING2D1G_0367 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D ING2D1G_0368 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ped00261]
D ING2D1G_0500 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0358 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D ING2D1G_0495 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D ING2D1G_0501 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D ING2D1G_0502 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D ING2D1G_0633 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:ped00401]
D ING2D1G_1471 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_1263 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D ING2D1G_1339 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ING2D1G_0567 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1338 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1294 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_0430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D ING2D1G_1348 hypothetical protein K02078 acpP; acyl carrier protein
D ING2D1G_0907 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D ING2D1G_1390 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ped00362]
D ING2D1G_0349 dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D ING2D1G_1422 gcdA; Glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D ING2D1G_1321 gcdB1; Na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1425 gcdB3; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1426 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ING2D1G_1427 Hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D ING2D1G_1408 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D ING2D1G_0115 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_0625 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ped00625]
D ING2D1G_0383 ywdH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:ped00643]
D ING2D1G_0115 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_0625 acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D ING2D1G_1424 gctA; Glutaconate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D ING2D1G_1423 gctB; Glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ped03020]
D ING2D1G_1157 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ING2D1G_1156 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ING2D1G_1093 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D ING2D1G_0589 putative DNA-directed RNA polymerase K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ped03010]
D ING2D1G_0865 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D ING2D1G_1114 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D ING2D1G_0840 rpsD2; 30S ribosomal protein S4 B K02986 RP-S4; small subunit ribosomal protein S4
D ING2D1G_1103 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D ING2D1G_1282 Ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D ING2D1G_0402 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D ING2D1G_1106 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D ING2D1G_1005 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D ING2D1G_1121 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D ING2D1G_1094 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D ING2D1G_0401 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D ING2D1G_1095 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D ING2D1G_1107 hypothetical protein K02954 RP-S14; small subunit ribosomal protein S14
D ING2D1G_0791 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D ING2D1G_0899 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D ING2D1G_1111 hypothetical protein K02961 RP-S17; small subunit ribosomal protein S17
D ING2D1G_1280 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18
D ING2D1G_1116 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D ING2D1G_0995 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D ING2D1G_0981 Ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D ING2D1G_0547 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D ING2D1G_1117 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D ING2D1G_1120 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D ING2D1G_1119 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D ING2D1G_1108 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D ING2D1G_1105 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D ING2D1G_0551 hypothetical protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D ING2D1G_0121 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D ING2D1G_0550 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D ING2D1G_0546 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D ING2D1G_1006 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D ING2D1G_1110 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D ING2D1G_1101 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D ING2D1G_1113 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D ING2D1G_1092 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D ING2D1G_1104 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D ING2D1G_0895 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D ING2D1G_0854 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D ING2D1G_0390 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D ING2D1G_1115 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D ING2D1G_1118 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D ING2D1G_1109 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D ING2D1G_0440 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D ING2D1G_0392 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D ING2D1G_0656 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D ING2D1G_1112 large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D ING2D1G_1102 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D ING2D1G_0850 hypothetical protein K02909 RP-L31; large subunit ribosomal protein L31
D ING2D1G_0666 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D ING2D1G_0855 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D ING2D1G_1096 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D ING2D1G_0400 Ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D ING2D1G_0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0928 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0294 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0522 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0114 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0300 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0923 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0528 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ped00970]
D ING2D1G_0110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ING2D1G_0296 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ING2D1G_0927 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ING2D1G_0539 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ING2D1G_0912 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ING2D1G_0911 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ING2D1G_0529 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ING2D1G_0922 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ING2D1G_0535 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ING2D1G_0916 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ING2D1G_0950 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D ING2D1G_0540 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D ING2D1G_0533 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ING2D1G_0918 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ING2D1G_0654 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ING2D1G_0913 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ING2D1G_0538 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ING2D1G_0951 tRNA-His K14226 tRNA-His; tRNA His
D ING2D1G_0524 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D ING2D1G_0530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ING2D1G_0921 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ING2D1G_0435 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ING2D1G_0541 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ING2D1G_0356 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ING2D1G_0316 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0531 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0532 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0919 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0920 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0317 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ING2D1G_0655 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ING2D1G_0492 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ING2D1G_0493 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ING2D1G_1380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ING2D1G_0542 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_0315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_0543 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_1194 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_1571 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0536 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0098 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0915 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0674 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D ING2D1G_0537 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ING2D1G_0914 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ING2D1G_0534 tRNA-Val K14237 tRNA-Val; tRNA Val
D ING2D1G_0917 tRNA-Val K14237 tRNA-Val; tRNA Val
D ING2D1G_1241 tRNA-Val K14237 tRNA-Val; tRNA Val
D ING2D1G_1188 gltX; Glutamate-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D ING2D1G_1174 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D ING2D1G_1173 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D ING2D1G_1175 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ING2D1G_0763 alaS; Alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ING2D1G_0875 aspS; Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ING2D1G_0585 asnS; Asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ING2D1G_0970 glyQ; Glycine-tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D ING2D1G_0969 glyS; Glycine-tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D ING2D1G_0624 thrS; Threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ING2D1G_1392 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ING2D1G_0511 cysS; Cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ING2D1G_1151 metG; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ING2D1G_0593 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D ING2D1G_0837 valS; Valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ING2D1G_0586 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ING2D1G_0306 ileS; Isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ING2D1G_0287 lysS; Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ING2D1G_0938 argS; Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ING2D1G_1375 proS; Proline-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ING2D1G_1264 hisS; Histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ING2D1G_0943 pheS; Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ING2D1G_0942 pheT; Phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ING2D1G_0326 tyrS; Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ING2D1G_0838 trpS; Tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ped03060]
D ING2D1G_1100 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D ING2D1G_0544 putative membrane protein K03073 secE; preprotein translocase subunit SecE
D ING2D1G_0127 Hypothetical protein K03075 secG; preprotein translocase subunit SecG
D ING2D1G_0884 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D ING2D1G_1605 Membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ING2D1G_0453 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ING2D1G_0900 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ING2D1G_0903 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ING2D1G_0992 spsB; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ING2D1G_0803 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ped04122]
D ING2D1G_0761 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0737 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0441 mnmA1; tRNA-specific 2-thiouridylase MnmA 1 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D ING2D1G_0738 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ped03018]
D ING2D1G_1182 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ING2D1G_0790 pnp4; Polyribonucleotide nucleotidyltransferase 4 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D ING2D1G_0421 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ING2D1G_0621 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D ING2D1G_0771 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D ING2D1G_0768 ribonucleases K12574 rnj; ribonuclease J [EC:3.1.-.-]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ING2D1G_0987 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ING2D1G_1309 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ING2D1G_0051 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ped03030]
D ING2D1G_0558 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ING2D1G_0857 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ING2D1G_0467 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ING2D1G_1030 putative DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ING2D1G_0996 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ING2D1G_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ING2D1G_0122 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ING2D1G_0965 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ING2D1G_1281 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ING2D1G_0749 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D ING2D1G_0364 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ING2D1G_1176 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ped03410]
D ING2D1G_1252 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D ING2D1G_0208 nth; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ING2D1G_1229 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D ING2D1G_0103 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D ING2D1G_0155 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D ING2D1G_1455 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D ING2D1G_0364 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ING2D1G_0881 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ING2D1G_1176 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ped03420]
D ING2D1G_1077 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D ING2D1G_0083 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D ING2D1G_0082 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D ING2D1G_0820 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D ING2D1G_1001 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ING2D1G_1177 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ING2D1G_0364 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ING2D1G_1176 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ped03430]
D ING2D1G_0778 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D ING2D1G_0939 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D ING2D1G_0777 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D ING2D1G_1001 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ING2D1G_1177 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ING2D1G_0253 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D ING2D1G_0254 Hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D ING2D1G_0881 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ING2D1G_1281 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ING2D1G_0558 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ING2D1G_0857 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ING2D1G_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ING2D1G_0467 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ING2D1G_0996 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ING2D1G_1030 putative DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ING2D1G_1176 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ped03440]
D ING2D1G_0881 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ING2D1G_1281 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ING2D1G_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D ING2D1G_0971 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D ING2D1G_0469 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D ING2D1G_0784 recA; Protein RecA K03553 recA; recombination protein RecA
D ING2D1G_0364 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ING2D1G_0889 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D ING2D1G_0888 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D ING2D1G_0890 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D ING2D1G_0659 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ING2D1G_1389 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D ING2D1G_0558 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ING2D1G_0857 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ING2D1G_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ING2D1G_0467 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ING2D1G_0996 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ING2D1G_1030 putative DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ING2D1G_0591 primosomal protein N` K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ped02010]
D ING2D1G_0745 potD; spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D ING2D1G_0744 potC; spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D ING2D1G_0743 Spermidine/putrescine transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein
D ING2D1G_0742 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D ING2D1G_1578 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D ING2D1G_1579 opuAA; Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D ING2D1G_0216 ABC-type sugar transport system K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D ING2D1G_0214 ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D ING2D1G_0215 ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D ING2D1G_0213 ABC-type transport system, sugar-family ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D ING2D1G_1088 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein
D ING2D1G_1087 pstC; phosphate ABC superfamily ATP binding cassette transporter, permease protein K02037 pstC; phosphate transport system permease protein
D ING2D1G_1086 pstA; phosphate ABC superfamily ATP binding cassette transporter, membrane protein K02038 pstA; phosphate transport system permease protein
D ING2D1G_1085 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D ING2D1G_1554 phosphonate ABC transporter periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D ING2D1G_1556 phosphonate ABC transporter inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D ING2D1G_1555 phnC2; Phosphonates import ATP-binding protein PhnC 2 K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D ING2D1G_1291 polar amino acid uptake ABC superfamily ATP binding cassette transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D ING2D1G_1290 glnP; glutamine ABC superfamily ATP binding cassette transporter, membrane protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D ING2D1G_1289 artM; Arginine transport ATP-binding protein ArtM K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D ING2D1G_0937 Type I periplasmic ligand-binding domain of uncharacterized ABC K01999 livK; branched-chain amino acid transport system substrate-binding protein
D ING2D1G_0936 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D ING2D1G_0935 amino acid or sugar ABC transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D ING2D1G_0934 livG; High-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D ING2D1G_0933 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D ING2D1G_0362 metQ; methionine ABC superfamily ATP binding cassette transporter, binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D ING2D1G_0361 metI; methionine ABC superfamily ATP binding cassette transporter, membrane protein K02072 metI; D-methionine transport system permease protein
D ING2D1G_0360 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D ING2D1G_0454 Oligopeptide transport system permease protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D ING2D1G_0455 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D ING2D1G_0456 dppC; Dipeptide transport system permease protein DppC K15582 oppC; oligopeptide transport system permease protein
D ING2D1G_0457 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D ING2D1G_0458 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D ING2D1G_0629 ABC-type metal ion transport system K09815 znuA; zinc transport system substrate-binding protein
D ING2D1G_0631 ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D ING2D1G_0630 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ING2D1G_0283 protein BioY K03523 bioY; biotin transport system substrate-specific component
D ING2D1G_1016 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D ING2D1G_1018 ecfA1-2; Energy-coupling factor transporter ATP-binding protein EcfA 1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ING2D1G_1017 ecfA1-1; Energy-coupling factor transporter ATP-binding protein EcfA 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ING2D1G_0088 putative membrane protein K19084 braE; bacitracin transport system permease protein
D ING2D1G_0087 bceA; ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D ING2D1G_0321 ftsX; putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ING2D1G_0320 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ING2D1G_0048 ABC transporter, permease/ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ING2D1G_0047 ABC transporter, permease/ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:ped02060]
D ING2D1G_0557 putative Phosphotransferase K02784 ptsH; phosphocarrier protein HPr
D ING2D1G_0634 putative Fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:ped03070]
D ING2D1G_0544 putative membrane protein K03073 secE; preprotein translocase subunit SecE
D ING2D1G_0127 Hypothetical protein K03075 secG; preprotein translocase subunit SecG
D ING2D1G_1100 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D ING2D1G_0884 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D ING2D1G_1605 Membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ING2D1G_0453 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ING2D1G_0903 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ING2D1G_0900 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ped02020]
D ING2D1G_1082 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D ING2D1G_1083 phoB; phosphate regulon response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ING2D1G_0608 phoP; DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ING2D1G_1560 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D ING2D1G_1088 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein
D ING2D1G_1273 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D ING2D1G_1274 Hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D ING2D1G_1275 Hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D ING2D1G_1453 sensory transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D ING2D1G_1454 walR; Transcriptional regulatory protein WalR K07668 vicR; two-component system, OmpR family, response regulator VicR
D ING2D1G_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ING2D1G_0088 putative membrane protein K19084 braE; bacitracin transport system permease protein
D ING2D1G_0087 bceA; ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D ING2D1G_0086 Histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D ING2D1G_0085 graR; Response regulator protein GraR K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D ING2D1G_1038 putative citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D ING2D1G_1037 citE; Citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D ING2D1G_1036 citF; Citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D ING2D1G_0325 ytsJ; Malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D ING2D1G_0508 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1562 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D ING2D1G_0957 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D ING2D1G_1207 Hypothetical protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D ING2D1G_1567 TRAP transporters K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D ING2D1G_1040 C4-dicarboxylate transport system permease large protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D ING2D1G_0016 TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D ING2D1G_1128 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D ING2D1G_1411 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ped02024]
D ING2D1G_0937 Type I periplasmic ligand-binding domain of uncharacterized ABC K01999 livK; branched-chain amino acid transport system substrate-binding protein
D ING2D1G_0936 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D ING2D1G_0935 amino acid or sugar ABC transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D ING2D1G_0934 livG; High-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D ING2D1G_0933 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D ING2D1G_0423 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D ING2D1G_0454 Oligopeptide transport system permease protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D ING2D1G_0455 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D ING2D1G_0456 dppC; Dipeptide transport system permease protein DppC K15582 oppC; oligopeptide transport system permease protein
D ING2D1G_0457 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D ING2D1G_0458 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D ING2D1G_1439 PBP2_NikA_DppA_OppA_like K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D ING2D1G_1438 dipeptide transporter permease DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D ING2D1G_1437 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D ING2D1G_1436 appD; Oligopeptide transport ATP-binding protein AppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D ING2D1G_1605 Membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D ING2D1G_0544 putative membrane protein K03073 secE; preprotein translocase subunit SecE
D ING2D1G_0127 Hypothetical protein K03075 secG; preprotein translocase subunit SecG
D ING2D1G_1100 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D ING2D1G_0884 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D ING2D1G_0453 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ING2D1G_0903 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ING2D1G_0900 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:ped02040]
D ING2D1G_0964 sigA; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ING2D1G_1562 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D ING2D1G_1182 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ped01501]
D ING2D1G_0454 Oligopeptide transport system permease protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D ING2D1G_0455 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D ING2D1G_0456 dppC; Dipeptide transport system permease protein DppC K15582 oppC; oligopeptide transport system permease protein
D ING2D1G_0457 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D ING2D1G_0458 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D ING2D1G_1600 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D ING2D1G_0282 penicillin-binding protein 1A (PBP1a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:ped01502]
D ING2D1G_0420 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ING2D1G_0902 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ING2D1G_0419 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D ING2D1G_0576 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ING2D1G_0579 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ped01503]
D ING2D1G_0953 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ped01000]
C 01001 Protein kinases [BR:ped01001]
D ING2D1G_0598 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D ING2D1G_1247 Hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D ING2D1G_0008 putative protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D ING2D1G_1082 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D ING2D1G_1453 sensory transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D ING2D1G_0086 Histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ped01009]
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ING2D1G_0597 protein phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ped01002]
D ING2D1G_0803 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D ING2D1G_0956 putative type IV prepilin leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ING2D1G_0335 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D ING2D1G_1319 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D ING2D1G_0835 glmS; Glutamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D ING2D1G_0022 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D ING2D1G_1514 Sortase K08600 srtB; sortase B [EC:3.4.22.71]
D ING2D1G_0584 putative dipeptidase B K08659 pepDA; dipeptidase [EC:3.4.-.-]
D ING2D1G_0650 Hypothetical protein K07052 K07052; CAAX protease family protein
D ING2D1G_1485 putative membrane protein K07052 K07052; CAAX protease family protein
D ING2D1G_0174 putative membrane protein K07052 K07052; CAAX protease family protein
D ING2D1G_1526 hypothetical protein K07052 K07052; CAAX protease family protein
D ING2D1G_0476 Hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D ING2D1G_1222 Peptidase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D ING2D1G_1603 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D ING2D1G_0301 pepT; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D ING2D1G_0094 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ING2D1G_0829 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D ING2D1G_1308 Metal-dependentamidase/aminoacylase/carboxypeptidase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D ING2D1G_1059 Amidase, hydantoinase/carbamoylase family K02083 allC; allantoate deiminase [EC:3.5.3.9]
D ING2D1G_0192 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D ING2D1G_0821 peptidase, M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D ING2D1G_0672 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D ING2D1G_0990 iadA; beta-aspartyl peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D ING2D1G_0470 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ING2D1G_1475 ftsH3; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ING2D1G_1067 ftsH2; ATP-dependent zinc metalloprotease FtsH 2 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ING2D1G_0859 Zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D ING2D1G_1575 peptidase family T4 K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D ING2D1G_0160 putative D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ING2D1G_1372 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D ING2D1G_1370 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D ING2D1G_0678 LexA protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D ING2D1G_0774 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D ING2D1G_0992 spsB; signal peptidase IB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D ING2D1G_0323 carboxy-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D ING2D1G_0067 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D ING2D1G_0770 yrrO; Peptidase family U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D ING2D1G_0940 Peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:ped01003]
D ING2D1G_0384 glycosyl transferase, group 1 family K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D ING2D1G_1442 Glycosyl transferases K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D ING2D1G_0282 penicillin-binding protein 1A (PBP1a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ING2D1G_0472 putative transglycosylase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D ING2D1G_0332 tagA; Glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D ING2D1G_1412 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ped01005]
D ING2D1G_1412 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ped01011]
D ING2D1G_1283 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D ING2D1G_1397 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D ING2D1G_0823 murC; UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D ING2D1G_0577 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D ING2D1G_0876 putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D ING2D1G_0420 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D ING2D1G_0902 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D ING2D1G_1266 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ING2D1G_1376 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D ING2D1G_0576 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D ING2D1G_0579 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D ING2D1G_0123 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ING2D1G_1000 pgpB; membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D ING2D1G_0375 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D ING2D1G_0182 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D ING2D1G_0282 penicillin-binding protein 1A (PBP1a) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D ING2D1G_0575 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D ING2D1G_0616 ftsI; cell division protein FtsI/penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D ING2D1G_0160 putative D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D ING2D1G_0472 putative transglycosylase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D ING2D1G_0476 Hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D ING2D1G_1514 Sortase K08600 srtB; sortase B [EC:3.4.22.71]
D ING2D1G_0887 sporulation protein SpoIID K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D ING2D1G_0953 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ped01004]
D ING2D1G_1339 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D ING2D1G_1343 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D ING2D1G_1337 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D ING2D1G_0567 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1338 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1294 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_0430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D ING2D1G_1336 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D ING2D1G_1342 fabK3; enoyl-[acyl carrier protein] reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D ING2D1G_0241 putative arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D ING2D1G_0908 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D ING2D1G_0809 glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D ING2D1G_0268 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ped01006]
D ING2D1G_0255 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D ING2D1G_0861 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D ING2D1G_0776 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:ped01007]
D ING2D1G_1188 gltX; Glutamate-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D ING2D1G_0326 tyrS; Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ING2D1G_0838 trpS; Tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ING2D1G_0511 cysS; Cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ING2D1G_0938 argS; Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ING2D1G_1151 metG; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ING2D1G_0306 ileS; Isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ING2D1G_0837 valS; Valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ING2D1G_0586 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ING2D1G_0287 lysS; Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ING2D1G_0875 aspS; Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ING2D1G_0585 asnS; Asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ING2D1G_1264 hisS; Histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ING2D1G_0970 glyQ; Glycine-tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D ING2D1G_0969 glyS; Glycine-tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D ING2D1G_1392 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ING2D1G_1375 proS; Proline-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ING2D1G_0624 thrS; Threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ING2D1G_0763 alaS; Alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ING2D1G_0943 pheS; Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ING2D1G_0942 pheT; Phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ING2D1G_0033 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D ING2D1G_1263 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D ING2D1G_1577 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D ING2D1G_1212 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D ING2D1G_0181 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ped03000]
D ING2D1G_1553 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D ING2D1G_0485 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D ING2D1G_0968 ccpN; CBS domain K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D ING2D1G_0520 Transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ING2D1G_0767 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ING2D1G_0628 Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ING2D1G_1211 Transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D ING2D1G_0760 putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D ING2D1G_1172 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D ING2D1G_1147 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D ING2D1G_1203 Arsenical Resistance Operon Repressor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D ING2D1G_1125 DNA-binding transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D ING2D1G_1195 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ING2D1G_1277 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D ING2D1G_1253 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D ING2D1G_0734 Hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D ING2D1G_1586 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ING2D1G_1024 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D ING2D1G_0989 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D ING2D1G_0198 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D ING2D1G_1187 putative central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D ING2D1G_0801 pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D ING2D1G_0582 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D ING2D1G_0572 Transcriptional regulator K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ped03021]
D ING2D1G_1093 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D ING2D1G_1157 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ING2D1G_1156 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ING2D1G_0589 putative DNA-directed RNA polymerase K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D ING2D1G_0964 sigA; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D ING2D1G_0385 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ING2D1G_0184 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D ING2D1G_0009 sigB; DNA-directed RNA polymerase sigma subunit SigB K03090 sigB; RNA polymerase sigma-B factor
D ING2D1G_1430 putative RNA polymerase sigma-I factor K03093 sigI; RNA polymerase sigma-I factor
D ING2D1G_1479 putative RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
D ING2D1G_1562 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D ING2D1G_0798 nusA; Transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D ING2D1G_0252 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D ING2D1G_0545 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D ING2D1G_1197 Serine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D ING2D1G_0007 Anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D ING2D1G_1247 Hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D ING2D1G_0008 putative protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D ING2D1G_0286 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D ING2D1G_0621 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ped03019]
D ING2D1G_0240 ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D ING2D1G_0906 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ING2D1G_0768 ribonucleases K12574 rnj; ribonuclease J [EC:3.1.-.-]
D ING2D1G_0771 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D ING2D1G_0421 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ING2D1G_1182 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ING2D1G_0790 pnp4; Polyribonucleotide nucleotidyltransferase 4 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D ING2D1G_0621 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D ING2D1G_0559 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D ING2D1G_0987 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ING2D1G_1309 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ING2D1G_0051 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D ING2D1G_1396 UPF0042 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:ped03011]
D ING2D1G_0865 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D ING2D1G_1114 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D ING2D1G_0840 rpsD2; 30S ribosomal protein S4 B K02986 RP-S4; small subunit ribosomal protein S4
D ING2D1G_1103 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D ING2D1G_1282 Ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D ING2D1G_0402 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D ING2D1G_1106 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D ING2D1G_1005 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D ING2D1G_1121 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D ING2D1G_1094 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D ING2D1G_0401 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D ING2D1G_1095 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D ING2D1G_1107 hypothetical protein K02954 RP-S14; small subunit ribosomal protein S14
D ING2D1G_0791 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D ING2D1G_0899 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D ING2D1G_1111 hypothetical protein K02961 RP-S17; small subunit ribosomal protein S17
D ING2D1G_1280 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18
D ING2D1G_1116 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D ING2D1G_0995 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D ING2D1G_0981 Ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D ING2D1G_0547 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D ING2D1G_1117 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D ING2D1G_1120 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D ING2D1G_1119 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D ING2D1G_1108 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D ING2D1G_1105 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D ING2D1G_0121 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D ING2D1G_0550 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D ING2D1G_0546 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D ING2D1G_0551 hypothetical protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D ING2D1G_1006 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D ING2D1G_1110 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D ING2D1G_1101 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D ING2D1G_1113 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D ING2D1G_1092 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D ING2D1G_1104 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D ING2D1G_0895 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D ING2D1G_0854 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D ING2D1G_0390 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D ING2D1G_1115 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D ING2D1G_1118 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D ING2D1G_1109 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D ING2D1G_0392 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D ING2D1G_0656 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D ING2D1G_1112 large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D ING2D1G_1102 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D ING2D1G_0850 hypothetical protein K02909 RP-L31; large subunit ribosomal protein L31
D ING2D1G_0666 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D ING2D1G_0855 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D ING2D1G_1096 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D ING2D1G_0440 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D ING2D1G_0400 Ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D ING2D1G_0114 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0300 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0923 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0528 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0928 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0294 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0522 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ped03009]
D ING2D1G_0906 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ING2D1G_0972 era; GTPase Era K03595 era; GTPase
D ING2D1G_0393 obg; GTPase obg K03979 obgE; GTPase [EC:3.6.5.-]
D ING2D1G_0798 nusA; Transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D ING2D1G_0252 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D ING2D1G_0545 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D ING2D1G_1148 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D ING2D1G_0595 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D ING2D1G_0660 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D ING2D1G_0984 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D ING2D1G_1588 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ING2D1G_0573 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D ING2D1G_0447 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D ING2D1G_0256 yqxC; putative rRNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D ING2D1G_0514 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D ING2D1G_0043 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D ING2D1G_0596 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D ING2D1G_0226 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ING2D1G_1541 trmA; 23S rRNA methyluridine methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ING2D1G_1551 putative RNA methyltransferase TTE1797 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D ING2D1G_0264 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D ING2D1G_0378 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D ING2D1G_0802 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D ING2D1G_1534 ermGT; Ribosomal RNA adenine dimethylase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D ING2D1G_1133 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D ING2D1G_0897 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D ING2D1G_0787 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D ING2D1G_0985 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D ING2D1G_0240 ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-]
D ING2D1G_0765 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D ING2D1G_0512 Ribonuclease III domain K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D ING2D1G_0599 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D ING2D1G_0810 der; GTPase Der K03977 engA; GTPase
D ING2D1G_0748 rbgA; Ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D ING2D1G_0473 GTP-binding protein HflX K03665 hflX; GTPase
D ING2D1G_1414 ywlC; tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC [ K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D ING2D1G_0880 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D ING2D1G_0795 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D ING2D1G_0799 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D ING2D1G_0003 RNA-binding protein K14761 rlbA; ribosome-associated protein
D ING2D1G_0398 Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D ING2D1G_0975 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D ING2D1G_0394 Hypothetical protein K07574 yhbY; RNA-binding protein
D ING2D1G_1381 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D ING2D1G_0869 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D ING2D1G_0665 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ped03016]
D ING2D1G_1356 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D ING2D1G_1375 proS; Proline-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D ING2D1G_0306 ileS; Isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D ING2D1G_0586 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ING2D1G_1151 metG; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D ING2D1G_0938 argS; Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ING2D1G_0287 lysS; Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D ING2D1G_0875 aspS; Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ING2D1G_0763 alaS; Alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D ING2D1G_0585 asnS; Asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D ING2D1G_0624 thrS; Threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D ING2D1G_1392 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D ING2D1G_0511 cysS; Cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D ING2D1G_0837 valS; Valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D ING2D1G_1264 hisS; Histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D ING2D1G_0943 pheS; Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D ING2D1G_0942 pheT; Phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D ING2D1G_0326 tyrS; Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ING2D1G_0838 trpS; Tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D ING2D1G_0879 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D ING2D1G_0982 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ING2D1G_0293 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D ING2D1G_1015 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D ING2D1G_0793 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D ING2D1G_0761 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0737 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_1414 ywlC; tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC [ K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D ING2D1G_0776 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D ING2D1G_1590 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D ING2D1G_1589 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ING2D1G_1606 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D ING2D1G_0952 ribonuclease PH/Ham1 protein K00989 rph; ribonuclease PH [EC:2.7.7.56]
D ING2D1G_0970 glyQ; Glycine-tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D ING2D1G_0969 glyS; Glycine-tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D ING2D1G_1188 gltX; Glutamate-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D ING2D1G_1464 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D ING2D1G_0374 YbaK/proline-tRNA ligase associated domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D ING2D1G_1564 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D ING2D1G_0285 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D ING2D1G_0779 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D ING2D1G_0983 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D ING2D1G_0896 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D ING2D1G_0963 putative methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D ING2D1G_1129 TrmH family RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D ING2D1G_0622 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D ING2D1G_0441 mnmA1; tRNA-specific 2-thiouridylase MnmA 1 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D ING2D1G_0154 tRNA 2-thiocytidine biosynthesis protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D ING2D1G_0886 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D ING2D1G_0494 Hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D ING2D1G_0885 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D ING2D1G_0738 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D ING2D1G_1069 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D ING2D1G_1134 O-sialoglycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D ING2D1G_1132 gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D ING2D1G_1135 tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE [ K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D ING2D1G_1178 tRNA A37 threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D ING2D1G_0663 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D ING2D1G_0421 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D ING2D1G_0790 pnp4; Polyribonucleotide nucleotidyltransferase 4 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ped03012]
D ING2D1G_0796 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D ING2D1G_0856 infC; translation initiation factor IF3 K02520 infC; translation initiation factor IF-3
D ING2D1G_1254 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D ING2D1G_0864 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D ING2D1G_0404 tuf1; Elongation factor Tu K02358 tuf; elongation factor Tu
D ING2D1G_1349 tuf2; Elongation factor Tu K02358 tuf; elongation factor Tu
D ING2D1G_0483 fusA2; Elongation factor G 2 K02355 fusA; elongation factor G
D ING2D1G_0403 fusA; Elongation factor G K02355 fusA; elongation factor G
D ING2D1G_0847 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D ING2D1G_0862 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D ING2D1G_0848 hemK; protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D ING2D1G_1078 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D ING2D1G_1097 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D ING2D1G_0249 efp; Elongation factor P K02356 efp; elongation factor P
D ING2D1G_1022 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:ped03110]
D ING2D1G_0178 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D ING2D1G_0201 clpC; Negative regulator of genetic competence ClpC/MecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D ING2D1G_1371 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D ING2D1G_0987 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ING2D1G_1309 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ING2D1G_0986 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D ING2D1G_0177 dnaJ3; chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein
D ING2D1G_0653 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D ING2D1G_0988 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D ING2D1G_1296 hsp20; heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D ING2D1G_1310 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D ING2D1G_0470 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ING2D1G_1475 ftsH3; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ING2D1G_1067 ftsH2; ATP-dependent zinc metalloprotease FtsH 2 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D ING2D1G_0194 putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D ING2D1G_1076 peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D ING2D1G_0832 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D ING2D1G_1146 NrdH-redoxin (NrdH) family K03676 grxC; glutaredoxin 3
D ING2D1G_0416 Glutaredoxin K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:ped04131]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_1186 gapB; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ING2D1G_1580 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ped03032]
D ING2D1G_1073 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D ING2D1G_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ING2D1G_0122 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D ING2D1G_0032 putative DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D ING2D1G_0965 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D ING2D1G_1281 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ING2D1G_0558 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ING2D1G_0857 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ING2D1G_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ING2D1G_0996 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ING2D1G_1030 putative DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ING2D1G_0467 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ING2D1G_0749 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D ING2D1G_0364 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ING2D1G_1176 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ING2D1G_0006 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ING2D1G_0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ING2D1G_0960 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ped03036]
D ING2D1G_0906 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_1073 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D ING2D1G_0177 dnaJ3; chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein
D ING2D1G_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D ING2D1G_0904 putative SMC family, C-domain protein K03529 smc; chromosome segregation protein
D ING2D1G_0262 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D ING2D1G_0263 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D ING2D1G_0320 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ING2D1G_0788 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D ING2D1G_0574 Hypothetical protein K03586 ftsL; cell division protein FtsL
D ING2D1G_0580 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D ING2D1G_0578 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D ING2D1G_0321 ftsX; putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ING2D1G_0581 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ING2D1G_0941 Protein membrane K09888 zapA; cell division protein ZapA
D ING2D1G_0953 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ING2D1G_0805 hypothetical protein K09772 sepF; cell division inhibitor SepF
D ING2D1G_1587 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D ING2D1G_1586 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ING2D1G_1589 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D ING2D1G_1588 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D ING2D1G_0772 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D ING2D1G_1075 putative tetrapyrrole methylase family protein/MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D ING2D1G_0677 Protein involved in cell division K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D ING2D1G_1369 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D ING2D1G_0556 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ped03400]
D ING2D1G_0066 Methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D ING2D1G_1229 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D ING2D1G_1252 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D ING2D1G_0208 nth; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D ING2D1G_0789 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ING2D1G_0103 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D ING2D1G_0155 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D ING2D1G_1455 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D ING2D1G_0881 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D ING2D1G_1176 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D ING2D1G_0364 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D ING2D1G_0083 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D ING2D1G_0082 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D ING2D1G_0820 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D ING2D1G_1001 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ING2D1G_1177 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D ING2D1G_1157 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D ING2D1G_1156 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D ING2D1G_1093 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D ING2D1G_0589 putative DNA-directed RNA polymerase K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D ING2D1G_1077 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D ING2D1G_0778 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D ING2D1G_0939 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D ING2D1G_0777 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D ING2D1G_0253 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D ING2D1G_0254 Hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D ING2D1G_0558 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D ING2D1G_0857 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D ING2D1G_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D ING2D1G_0996 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D ING2D1G_1030 putative DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D ING2D1G_0467 DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D ING2D1G_1281 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ING2D1G_1389 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D ING2D1G_0784 recA; Protein RecA K03553 recA; recombination protein RecA
D ING2D1G_0889 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D ING2D1G_0888 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D ING2D1G_0890 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D ING2D1G_0591 primosomal protein N` K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D ING2D1G_0782 chromosome segregation protein K03546 sbcC; DNA repair protein SbcC/Rad50
D ING2D1G_0636 putative Ser/Thr protein phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11
D ING2D1G_0783 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D ING2D1G_0202 radA; DNA repair protein RadA homolog K04485 radA; DNA repair protein RadA/Sms
D ING2D1G_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D ING2D1G_0659 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D ING2D1G_0971 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D ING2D1G_0469 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D ING2D1G_0257 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D ING2D1G_0380 UvrD/REP helicase subfamily K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D ING2D1G_0090 Hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D ING2D1G_0006 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D ING2D1G_0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D ING2D1G_0960 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D ING2D1G_1073 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D ING2D1G_0432 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D ING2D1G_0678 LexA protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D ING2D1G_0774 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D ING2D1G_0613 putative RecX protein K03565 recX; regulatory protein
D ING2D1G_0794 Exopolyphosphatase-related proteins K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ped03029]
D ING2D1G_0796 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D ING2D1G_0856 infC; translation initiation factor IF3 K02520 infC; translation initiation factor IF-3
D ING2D1G_0864 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D ING2D1G_0404 tuf1; Elongation factor Tu K02358 tuf; elongation factor Tu
D ING2D1G_1349 tuf2; Elongation factor Tu K02358 tuf; elongation factor Tu
D ING2D1G_0483 fusA2; Elongation factor G 2 K02355 fusA; elongation factor G
D ING2D1G_0403 fusA; Elongation factor G K02355 fusA; elongation factor G
D ING2D1G_0972 era; GTPase Era K03595 era; GTPase
D ING2D1G_0326 tyrS; Tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D ING2D1G_0586 leuS; Leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D ING2D1G_0875 aspS; Aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D ING2D1G_0938 argS; Arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D ING2D1G_1174 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D ING2D1G_1173 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D ING2D1G_1175 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D ING2D1G_1281 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D ING2D1G_0987 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ING2D1G_0988 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D ING2D1G_1309 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ING2D1G_1310 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D ING2D1G_0986 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D ING2D1G_0761 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0737 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_1605 Membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ped02000]
D ING2D1G_0048 ABC transporter, permease/ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D ING2D1G_0047 ABC transporter, permease/ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D ING2D1G_0376 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D ING2D1G_0745 potD; spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D ING2D1G_0744 potC; spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D ING2D1G_0743 Spermidine/putrescine transport system permease protein K11071 potB; spermidine/putrescine transport system permease protein
D ING2D1G_0742 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D ING2D1G_1578 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D ING2D1G_1579 opuAA; Glycine betaine transport ATP-binding protein OpuAA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D ING2D1G_0312 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D ING2D1G_0313 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D ING2D1G_0314 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D ING2D1G_0216 ABC-type sugar transport system K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D ING2D1G_0214 ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D ING2D1G_0215 ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D ING2D1G_0213 ABC-type transport system, sugar-family ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D ING2D1G_0506 putative membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D ING2D1G_0507 ABC transporter-like protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D ING2D1G_1088 ABC-type phosphate transport system periplasmic component-like protein K02040 pstS; phosphate transport system substrate-binding protein
D ING2D1G_1087 pstC; phosphate ABC superfamily ATP binding cassette transporter, permease protein K02037 pstC; phosphate transport system permease protein
D ING2D1G_1086 pstA; phosphate ABC superfamily ATP binding cassette transporter, membrane protein K02038 pstA; phosphate transport system permease protein
D ING2D1G_1085 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D ING2D1G_1554 phosphonate ABC transporter periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D ING2D1G_1556 phosphonate ABC transporter inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D ING2D1G_1555 phnC2; Phosphonates import ATP-binding protein PhnC 2 K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D ING2D1G_1291 polar amino acid uptake ABC superfamily ATP binding cassette transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D ING2D1G_1290 glnP; glutamine ABC superfamily ATP binding cassette transporter, membrane protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D ING2D1G_1289 artM; Arginine transport ATP-binding protein ArtM K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D ING2D1G_0937 Type I periplasmic ligand-binding domain of uncharacterized ABC K01999 livK; branched-chain amino acid transport system substrate-binding protein
D ING2D1G_0936 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D ING2D1G_0935 amino acid or sugar ABC transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D ING2D1G_0934 livG; High-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D ING2D1G_0933 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D ING2D1G_0362 metQ; methionine ABC superfamily ATP binding cassette transporter, binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D ING2D1G_0361 metI; methionine ABC superfamily ATP binding cassette transporter, membrane protein K02072 metI; D-methionine transport system permease protein
D ING2D1G_0360 metN2; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D ING2D1G_0477 ABC superfamily ATP binding cassette transporter, binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ING2D1G_0478 ABC superfamily ATP binding cassette transporter, binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ING2D1G_1047 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D ING2D1G_0479 ABC superfamily ATP binding cassette transporter, membrane protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D ING2D1G_1046 branched-chain amino acid ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D ING2D1G_0480 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D ING2D1G_1045 ABC-type uncharacterized transport system K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D ING2D1G_0454 Oligopeptide transport system permease protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D ING2D1G_0455 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D ING2D1G_0456 dppC; Dipeptide transport system permease protein DppC K15582 oppC; oligopeptide transport system permease protein
D ING2D1G_0457 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D ING2D1G_0458 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D ING2D1G_1439 PBP2_NikA_DppA_OppA_like K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D ING2D1G_1438 dipeptide transporter permease DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D ING2D1G_1437 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D ING2D1G_1436 appD; Oligopeptide transport ATP-binding protein AppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D ING2D1G_1218 ABC superfamily ATP binding cassette transporter membrane/binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D ING2D1G_0629 ABC-type metal ion transport system K09815 znuA; zinc transport system substrate-binding protein
D ING2D1G_0631 ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D ING2D1G_0630 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D ING2D1G_0283 protein BioY K03523 bioY; biotin transport system substrate-specific component
D ING2D1G_0175 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D ING2D1G_1016 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D ING2D1G_1018 ecfA1-2; Energy-coupling factor transporter ATP-binding protein EcfA 1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ING2D1G_1017 ecfA1-1; Energy-coupling factor transporter ATP-binding protein EcfA 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D ING2D1G_0088 putative membrane protein K19084 braE; bacitracin transport system permease protein
D ING2D1G_0087 bceA; ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D ING2D1G_0866 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D ING2D1G_0867 putative ABC transporter, ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D ING2D1G_0321 ftsX; putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D ING2D1G_0320 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D ING2D1G_0173 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D ING2D1G_0171 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ING2D1G_0205 ABC superfamily transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D ING2D1G_1284 permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein
D ING2D1G_1199 ABC superfamily ATP binding cassette transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D ING2D1G_1496 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D ING2D1G_1285 putative ABC transporter ATP-binding protein MJ1508 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ING2D1G_1200 yknY; putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ING2D1G_1368 putative ABC transporter ATP-binding protein TM_0352 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D ING2D1G_0755 FeS assembly ATPase Suf K09013 sufC; Fe-S cluster assembly ATP-binding protein
D ING2D1G_0193 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D ING2D1G_1025 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D ING2D1G_0029 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D ING2D1G_1351 Hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D ING2D1G_0557 putative Phosphotransferase K02784 ptsH; phosphocarrier protein HPr
D ING2D1G_1323 formate/nitrite transporter K02598 nirC; nitrite transporter
D ING2D1G_1304 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D ING2D1G_1312 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D ING2D1G_1002 magnesium transporter K06213 mgtE; magnesium transporter
D ING2D1G_0159 magnesium transporter K06213 mgtE; magnesium transporter
D ING2D1G_0168 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_1270 Hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_1271 Hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_0754 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_1066 metal cation transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D ING2D1G_1162 putative histidine transporter YuiF K07084 yuiF; putative amino acid transporter
D ING2D1G_1061 Na+/proline symporter K11928 putP; sodium/proline symporter
D ING2D1G_1418 sodium/glutamate symporter superfamily K03312 gltS; glutamate:Na+ symporter, ESS family
D ING2D1G_1265 NA+/H+ antiporter NHAC K03315 nhaC; Na+:H+ antiporter, NhaC family
D ING2D1G_0148 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D ING2D1G_0450 nhaC; NhaC family sodium:proton (Na+:H+) antiporter K18218 tet35; tetracycline resistance efflux pump
D ING2D1G_1049 NhaP-type Na+(K+)/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D ING2D1G_1231 Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D ING2D1G_0853 potassium uptake protein KtrB K03498 trkH; trk/ktr system potassium uptake protein
D ING2D1G_1230 putative potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D ING2D1G_1232 potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D ING2D1G_0852 potassium uptake protein KtrA K03499 trkA; trk/ktr system potassium uptake protein
D ING2D1G_1051 pyrP; Uracil permease K02824 uraA; uracil permease
D ING2D1G_1221 putative permease MJ0326 K06901 pbuG; adenine/guanine/hypoxanthine permease
D ING2D1G_0018 CHR family chromate ion efflux pump K07240 chrA; chromate transporter
D ING2D1G_0019 chromate transport protein K07240 chrA; chromate transporter
D ING2D1G_1207 Hypothetical protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D ING2D1G_1567 TRAP transporters K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D ING2D1G_1040 C4-dicarboxylate transport system permease large protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D ING2D1G_0016 TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D ING2D1G_1545 Hypothetical protein K21394 yiaM; TRAP-type transport system small permease protein
D ING2D1G_0015 TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein K21394 yiaM; TRAP-type transport system small permease protein
D ING2D1G_1208 PBP2_TRAP_Siap_TeaA_like K21395 yiaO; TRAP-type transport system periplasmic protein
D ING2D1G_1268 Na/Pi-cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D ING2D1G_0375 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D ING2D1G_0182 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D ING2D1G_1391 putative permease K24180 mleP; malate permease and related proteins
D ING2D1G_0461 transporter, auxin efflux carrier (AEC) family K24180 mleP; malate permease and related proteins
D ING2D1G_0627 putative membrane protein K26605 azlC; branched chain amino acid efflux pump
D ING2D1G_0626 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D ING2D1G_1273 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D ING2D1G_1274 Hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D ING2D1G_1275 Hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D ING2D1G_0439 putative membrane protein K23675 fmnP; riboflavin transporter
D ING2D1G_0070 hypothetical protein K23675 fmnP; riboflavin transporter
D ING2D1G_1164 putative proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D ING2D1G_0578 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D ING2D1G_0128 hppA; Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D ING2D1G_1321 gcdB1; Na+-transporting oxaloacetate decarboxylase beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_1425 gcdB3; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D ING2D1G_0482 pycB; Pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D ING2D1G_1056 Methylmalonyl-CoA carboxyltransferase 12S subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D ING2D1G_1426 Biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D ING2D1G_1427 Hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D ING2D1G_1422 gcdA; Glutaconyl-CoA decarboxylase subunit alpha K01615 gcdA; glutaconyl-CoA decarboxylase subunit alpha [EC:7.2.4.5]
D ING2D1G_1192 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D ING2D1G_1193 FeoA domain K04758 feoA; ferrous iron transport protein A
D ING2D1G_1191 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ped02044]
D ING2D1G_0956 putative type IV prepilin leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D ING2D1G_0957 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D ING2D1G_0959 Type II secretory pathway K02652 pilB; type IV pilus assembly protein PilB
D ING2D1G_0958 putative bacterial type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D ING2D1G_0673 competence protein K02237 comEA; competence protein ComEA
D ING2D1G_1305 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D ING2D1G_0997 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D ING2D1G_0453 secA; Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D ING2D1G_0544 putative membrane protein K03073 secE; preprotein translocase subunit SecE
D ING2D1G_0127 Hypothetical protein K03075 secG; preprotein translocase subunit SecG
D ING2D1G_1100 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D ING2D1G_0900 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ING2D1G_0903 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D ING2D1G_0884 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D ING2D1G_1605 Membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:ped02042]
D ING2D1G_0168 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_1270 Hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_1271 Hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_0754 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D ING2D1G_0452 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ped02022]
D ING2D1G_1082 phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D ING2D1G_1083 phoB; phosphate regulon response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ING2D1G_0608 phoP; DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D ING2D1G_1453 sensory transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D ING2D1G_1454 walR; Transcriptional regulatory protein WalR K07668 vicR; two-component system, OmpR family, response regulator VicR
D ING2D1G_0086 Histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D ING2D1G_0085 graR; Response regulator protein GraR K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
C 02035 Bacterial motility proteins [BR:ped02035]
D ING2D1G_0957 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D ING2D1G_0959 Type II secretory pathway K02652 pilB; type IV pilus assembly protein PilB
D ING2D1G_0958 putative bacterial type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D ING2D1G_0956 putative type IV prepilin leader peptidase PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ped04812]
D ING2D1G_0581 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ING2D1G_1587 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D ING2D1G_1586 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ped04147]
D ING2D1G_1307 fda; Fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D ING2D1G_1182 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D ING2D1G_1186 gapB; Glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D ING2D1G_1185 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D ING2D1G_1580 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D ING2D1G_0548 putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D ING2D1G_1309 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D ING2D1G_0987 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D ING2D1G_1196 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D ING2D1G_0605 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D ING2D1G_0404 tuf1; Elongation factor Tu K02358 tuf; elongation factor Tu
D ING2D1G_1349 tuf2; Elongation factor Tu K02358 tuf; elongation factor Tu
D ING2D1G_0982 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D ING2D1G_1205 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D ING2D1G_1410 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D ING2D1G_1099 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D ING2D1G_0433 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D ING2D1G_0564 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D ING2D1G_0563 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D ING2D1G_0549 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D ING2D1G_0508 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D ING2D1G_1560 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D ING2D1G_1581 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0036 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0180 serA3; D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_0487 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D ING2D1G_1316 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D ING2D1G_0409 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D ING2D1G_1007 etfA1; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D ING2D1G_1364 eftA; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D ING2D1G_1184 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:ped02048]
D ING2D1G_0222 Type I restriction enzyme R protein, N-terminal domain protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D ING2D1G_0223 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D ING2D1G_1550 type I restriction system adenine methylase HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D ING2D1G_0224 hsdM; Type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D ING2D1G_1533 putative protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D ING2D1G_0328 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D ING2D1G_0735 Hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D ING2D1G_0734 Hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D ING2D1G_0723 putative protein conserved K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D ING2D1G_0722 addiction module antitoxin K07473 dinJ; DNA-damage-inducible protein J
D ING2D1G_0581 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D ING2D1G_0761 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D ING2D1G_0737 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ped01504]
D ING2D1G_0450 nhaC; NhaC family sodium:proton (Na+:H+) antiporter K18218 tet35; tetracycline resistance efflux pump
D ING2D1G_1538 Translation elongation factor EF-G, a GTPase K18220 tetM; ribosomal protection tetracycline resistance protein
D ING2D1G_1534 ermGT; Ribosomal RNA adenine dimethylase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D ING2D1G_1600 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ped00537]
D ING2D1G_1560 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ped03100]
D ING2D1G_0110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ING2D1G_0296 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ING2D1G_0927 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D ING2D1G_0539 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ING2D1G_0912 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ING2D1G_0911 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D ING2D1G_0529 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ING2D1G_0922 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D ING2D1G_0535 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ING2D1G_0916 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D ING2D1G_0950 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D ING2D1G_0540 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D ING2D1G_0533 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ING2D1G_0918 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D ING2D1G_0654 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ING2D1G_0913 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ING2D1G_0538 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D ING2D1G_0951 tRNA-His K14226 tRNA-His; tRNA His
D ING2D1G_0524 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D ING2D1G_0530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ING2D1G_0921 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ING2D1G_0435 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D ING2D1G_0541 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ING2D1G_0356 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D ING2D1G_0316 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0531 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0532 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0919 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0920 tRNA-Met K14230 tRNA-Met; tRNA Met
D ING2D1G_0317 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ING2D1G_0655 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D ING2D1G_0492 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ING2D1G_0493 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ING2D1G_1380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D ING2D1G_0542 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_0315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_0543 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_1194 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D ING2D1G_1571 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0536 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0098 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0915 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D ING2D1G_0674 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D ING2D1G_0537 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ING2D1G_0914 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D ING2D1G_0534 tRNA-Val K14237 tRNA-Val; tRNA Val
D ING2D1G_0917 tRNA-Val K14237 tRNA-Val; tRNA Val
D ING2D1G_1241 tRNA-Val K14237 tRNA-Val; tRNA Val
D ING2D1G_0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0928 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0294 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0522 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D ING2D1G_0114 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0300 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0923 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D ING2D1G_0528 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D ING2D1G_0405 acoA; Pyruvate dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D ING2D1G_0406 acoB; Pyruvate dehydrogenase E1 component subunit alpha K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D ING2D1G_1417 putative NAD/nadp octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D ING2D1G_0149 Hypothetical protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D ING2D1G_1090 NAD/nadp octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D ING2D1G_0830 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D ING2D1G_0827 Peroxiredoxin family K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D ING2D1G_0041 Redoxin family protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D ING2D1G_0309 ahpC; Alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D ING2D1G_1050 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D ING2D1G_1219 sorA; superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D ING2D1G_1026 ftnB; nonheme iron-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D ING2D1G_1169 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D ING2D1G_1153 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D ING2D1G_1198 ypsC; putative RNA methyltransferase YpsC K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D ING2D1G_0670 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D ING2D1G_0442 thiamin biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D ING2D1G_0658 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D ING2D1G_0967 putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D ING2D1G_1224 polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D ING2D1G_0603 protein of hypothetical K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D ING2D1G_0819 HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D ING2D1G_0200 putative ATP:guanido phosphotransferase domain protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D ING2D1G_1055 hypothetical protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D ING2D1G_1405 frc; formyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D ING2D1G_1401 Macro domain-containing protein MA_1614 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D ING2D1G_1181 Phosphohistidine phosphatase (SixA) K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D ING2D1G_0120 DHH subfamily 1 protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D ING2D1G_1150 TatD like proteins K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D ING2D1G_1149 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D ING2D1G_0444 nucH; thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D ING2D1G_0276 entD; N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D ING2D1G_0592 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D ING2D1G_0399 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D ING2D1G_0327 Carbohydrate kinase family protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D ING2D1G_1420 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase alpha subunit K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167]
D ING2D1G_1419 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167]
D ING2D1G_1594 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D ING2D1G_1043 hypothetical protein K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]
D ING2D1G_1421 hgdC; Activator of (R)-2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D ING2D1G_0040 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D ING2D1G_0231 Electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D ING2D1G_0230 rnfC; Electron transport complex subunit C K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D ING2D1G_0235 Electron transport complex B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D ING2D1G_1011 yloB; Calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D ING2D1G_0998 cadA; Cadmium, zinc and cobalt-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D ING2D1G_1004 Sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D ING2D1G_0232 electron transport complex G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D ING2D1G_0233 rnfE; Electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D ING2D1G_0234 rnfA; Electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D ING2D1G_0759 NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D ING2D1G_0169 norV; Anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D ING2D1G_1477 hypothetical protein K02574 napH; ferredoxin-type protein NapH
D ING2D1G_1008 etfB1; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D ING2D1G_0092 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D ING2D1G_0806 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D ING2D1G_0833 Cold shock protein-related protein K03704 cspA; cold shock protein
C 99974 Translation
D ING2D1G_1070 Hypothetical protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D ING2D1G_0199 putative UvrB/uvrC protein K19411 mcsA; protein arginine kinase activator
D ING2D1G_1373 trigger factor K03545 tig; trigger factor
D ING2D1G_0422 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D ING2D1G_0954 hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D ING2D1G_0751 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D ING2D1G_1155 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D ING2D1G_0979 nodulation efficiency protein D (NfeD) K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D ING2D1G_1306 Ribonuclease H K06993 K06993; ribonuclease H-related protein
D ING2D1G_0239 DNA repair proteins K03630 radC; DNA repair protein RadC
D ING2D1G_0750 Hypothetical protein K07460 yraN; putative endonuclease
D ING2D1G_0612 putative endonuclease K07461 K07461; putative endonuclease
D ING2D1G_0752 DNA processing protein DprA K04096 smf; DNA processing protein
D ING2D1G_0696 prophage LambdaCh01 protein K07474 xtmA; phage terminase small subunit
D ING2D1G_0697 phage terminase large subunit K06909 xtmB; phage terminase large subunit
D ING2D1G_0583 yrvN; putative AAA domain-containing protein YrvN K07478 ycaJ; putative ATPase
D ING2D1G_0076 putative protein K06919 K06919; putative DNA primase/helicase
D ING2D1G_0079 putative transposase K07493 K07493; putative transposase
D ING2D1G_0080 IS256 family transposase K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
D ING2D1G_0468 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D ING2D1G_0562 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ING2D1G_0183 sodium transporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D ING2D1G_1127 Na+/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ING2D1G_0064 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D ING2D1G_0481 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D ING2D1G_1604 Hypothetical protein K06346 jag; spoIIIJ-associated protein
D ING2D1G_1325 Allophanate hydrolase subunit 2 K06350 kipA; antagonist of KipI
D ING2D1G_1326 allophanate hydrolase K06351 kipI; inhibitor of KinA
D ING2D1G_1516 DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D ING2D1G_1518 DNA recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D ING2D1G_1527 resolvase family site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D ING2D1G_1537 resolvase, N-terminal domain protein K06400 spoIVCA; site-specific DNA recombinase
D ING2D1G_0071 recombinase K06400 spoIVCA; site-specific DNA recombinase
D ING2D1G_0822 Stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D ING2D1G_1227 typA; GTP-binding protein TypA/BipA homolog K06207 typA; GTP-binding protein
D ING2D1G_0270 Hypothetical protein K07166 K07166; ACT domain-containing protein
D ING2D1G_0976 phoH; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D ING2D1G_1201 putative efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D ING2D1G_1084 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D ING2D1G_1202 putative membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D ING2D1G_1440 putative N-acyltransferase K02348 elaA; ElaA protein
D ING2D1G_0039 hydrolase K04477 ycdX; putative hydrolase
D ING2D1G_1303 phospholipase, patatin family K07001 K07001; NTE family protein
D ING2D1G_0756 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D ING2D1G_1387 Virulence factor BrkB K07058 K07058; membrane protein
D ING2D1G_0739 lemA; LemA family protein K03744 lemA; LemA protein
D ING2D1G_0054 putative membrane protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D ING2D1G_0882 radical SAM domain protein K06871 K06871; uncharacterized protein
D ING2D1G_0740 putative membrane protein K06872 K06872; uncharacterized protein
D ING2D1G_1228 hypothetical protein K06889 K06889; uncharacterized protein
D ING2D1G_0898 Hypothetical protein K06960 K06960; uncharacterized protein
D ING2D1G_0515 RNA-binding protein K06962 K06962; uncharacterized protein
D ING2D1G_0594 Hypothetical protein K06973 K06973; uncharacterized protein
D ING2D1G_1223 putative uncharacterized protein K06975 K06975; uncharacterized protein
D ING2D1G_1572 nimB; Nitroimidazol reductase NimA K07005 K07005; uncharacterized protein
D ING2D1G_1089 Phosphotransferase system, EIIC K07035 K07035; uncharacterized protein
D ING2D1G_1463 ypfJ; putative metalloprotease K07054 K07054; uncharacterized protein
D ING2D1G_1293 nitroreductase K07078 K07078; uncharacterized protein
D ING2D1G_0387 TRAP transporter solute receptor K07080 K07080; uncharacterized protein
D ING2D1G_1054 TRAP-type uncharacterized transport system K07080 K07080; uncharacterized protein
D ING2D1G_0355 TRAP transporter solute receptor K07080 K07080; uncharacterized protein
D ING2D1G_1171 permease family protein K07089 K07089; uncharacterized protein
D ING2D1G_0671 putative Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D ING2D1G_0638 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein
D ING2D1G_0800 putative FAD-dependent dehydrogenases K07137 K07137; uncharacterized protein
D ING2D1G_0190 radical SAM protein K07139 K07139; uncharacterized protein
D ING2D1G_0826 radical SAM protein K07139 K07139; uncharacterized protein
D ING2D1G_1065 putative membrane protein K07149 K07149; uncharacterized protein
D ING2D1G_0097 putative membrane protein K07149 K07149; uncharacterized protein
D ING2D1G_1251 putative membrane protein K07150 K07150; uncharacterized protein
D ING2D1G_1365 hypothetical protein K09004 K09004; uncharacterized protein
D ING2D1G_0980 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D ING2D1G_0271 Hypothetical protein K09157 K09157; uncharacterized protein
D ING2D1G_0207 hypothetical protein K09764 K09764; uncharacterized protein
D ING2D1G_0901 putative helix-turn-helix protein K09787 K09787; uncharacterized protein
D ING2D1G_0227 S1 RNA binding domain protein K00243 K00243; uncharacterized protein
D ING2D1G_0373 hypothetical protein K09975 K09975; uncharacterized protein
D ING2D1G_0736 hypothetical protein K07502 yprB; uncharacterized protein
D ING2D1G_0391 hypothetical protein K07584 ysxB; uncharacterized protein
D ING2D1G_0797 Hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024