+D GENES KO
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KEGG Orthology (KO) - Candidatus Sodalis pierantonius
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pes00010]
D SOPEG_3663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOPEG_0342 Tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_3888 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_0911 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOPEG_1465 gapA; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOPEG_3887 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOPEG_0483 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOPEG_1012 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOPEG_2377 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_2574 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_2671 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOPEG_2670 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_3346 yihX; putative haloacid dehalogenase-like hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D SOPEG_0286 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SOPEG_2975 crr; PTS system glucose-specific transporter subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SOPEG_2154 ptsG; PTS system glucose-specific transporter subunits IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:pes00020]
D SOPEG_0686 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SOPEG_3963 icd; Isocitrate dehydrogenase [NADP] Monomeric isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOPEG_0691 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SOPEG_0692 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_0694 sucD; Succinyl-CoA synthetase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOPEG_0693 sucC; Succinyl-CoA synthetase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOPEG_0689 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOPEG_0690 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOPEG_0687 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOPEG_0688 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOPEG_2341 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SOPEG_3085 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SOPEG_0286 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SOPEG_2671 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOPEG_2670 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pes00030]
D SOPEG_3663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOPEG_2572 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SOPEG_0492 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SOPEG_1960 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SOPEG_0270 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SOPEG_2991 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOPEG_2990 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SOPEG_3893 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SOPEG_1287 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SOPEG_3921 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SOPEG_1285 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SOPEG_2484 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOPEG_2571 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SOPEG_3498 gntK; gluconate kinase 1 K00851 idnK; gluconokinase [EC:2.7.1.12]
D SOPEG_0342 Tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_3888 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pes00040]
D SOPEG_2422 pectin degradation protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D SOPEG_2281 kduD1; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D SOPEG_1406 uxaC2; D-glucuronate isomerase / D-galacturonate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D SOPEG_3944 uxaB2; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D SOPEG_1407 uxaB1; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D SOPEG_1408 uxaA1; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D SOPEG_2771 yeiQ; D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D SOPEG_1450 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOPEG_1451 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOPEG_2545 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SOPEG_0270 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SOPEG_0785 D-lyxose isomerase K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D SOPEG_1553 aldH; Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:pes00051]
D SOPEG_2342 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SOPEG_1953 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SOPEG_1952 cpsB; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOPEG_2631 Mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOPEG_4101 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SOPEG_2767 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SOPEG_0342 Tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_3888 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_0911 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pes00052]
D SOPEG_0484 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SOPEG_0486 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOPEG_1451 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOPEG_3068 putative PTS system galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SOPEG_3066 putative PTS system galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:pes00053]
D SOPEG_1450 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOPEG_1449 uge; dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SOPEG_2545 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SOPEG_1553 aldH; Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D SOPEG_1002 garD; D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:pes00500]
D SOPEG_1451 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOPEG_4062 bcsA2; Cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D SOPEG_0299 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SOPEG_0298 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SOPEG_2975 crr; PTS system glucose-specific transporter subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SOPEG_3663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pes00520]
D SOPEG_1778 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SOPEG_2975 crr; PTS system glucose-specific transporter subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SOPEG_0672 nagE; PTS system N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SOPEG_0670 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SOPEG_0671 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SOPEG_0017 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOPEG_1259 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SOPEG_0016 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SOPEG_0169 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOPEG_3602 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOPEG_1970 nanE; N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SOPEG_0381 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SOPEG_0380 rffD; UDP-glucose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SOPEG_3209 arnA; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D SOPEG_3207 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SOPEG_3208 arnC; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D SOPEG_3210 arnD; 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D SOPEG_2154 ptsG; PTS system glucose-specific transporter subunits IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SOPEG_1451 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOPEG_1450 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOPEG_0484 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SOPEG_0486 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOPEG_1449 uge; dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SOPEG_3663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOPEG_2342 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SOPEG_1953 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SOPEG_1952 cpsB; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:pes00620]
D SOPEG_2671 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOPEG_2670 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_2855 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOPEG_2856 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOPEG_2377 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_2574 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_3383 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOPEG_3692 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOPEG_3691 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOPEG_2873 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOPEG_2020 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D SOPEG_2368 gloA; Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SOPEG_0762 gloB; Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SOPEG_3085 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SOPEG_2341 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SOPEG_2696 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOPEG_0286 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pes00630]
D SOPEG_0686 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SOPEG_2280 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
D SOPEG_0269 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SOPEG_3351 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOPEG_3118 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOPEG_3901 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_3902 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SOPEG_1005 garR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SOPEG_2571 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:pes00640]
D SOPEG_2855 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOPEG_2856 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_3383 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOPEG_3692 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOPEG_3691 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOPEG_2873 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOPEG_0693 sucC; Succinyl-CoA synthetase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOPEG_0694 sucD; Succinyl-CoA synthetase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOPEG_3716 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:pes00650]
D SOPEG_0968 caiD; enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D SOPEG_0689 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOPEG_0690 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOPEG_0687 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOPEG_0688 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOPEG_2079 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOPEG_0394 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SOPEG_3675 Oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:pes00660]
D SOPEG_2079 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOPEG_0394 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SOPEG_0693 sucC; Succinyl-CoA synthetase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOPEG_0694 sucD; Succinyl-CoA synthetase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOPEG_2084 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SOPEG_2082 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pes00562]
D SOPEG_3114 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SOPEG_0911 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pes00190]
D SOPEG_2847 nuoA; NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SOPEG_2846 nuoB; NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SOPEG_2845 nuoC; bifunctional NADH:ubiquinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D SOPEG_2844 nuoE; NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SOPEG_2843 nuoF; NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SOPEG_2842 nuoG; NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SOPEG_2841 nuoH; NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SOPEG_2840 nuoI; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SOPEG_2839 nuoJ; NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SOPEG_2838 nuoK; NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SOPEG_2837 nuoL; NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SOPEG_2836 nuoM; NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SOPEG_2835 nuoN; NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SOPEG_2301 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SOPEG_0689 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOPEG_0690 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOPEG_0687 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOPEG_0688 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOPEG_4014 cyoE; Heme O synthase protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SOPEG_4013 cyoD; Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D SOPEG_4012 cyoC; Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D SOPEG_0696 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SOPEG_0697 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SOPEG_0698 ybgT; ybgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SOPEG_0008 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SOPEG_0010 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SOPEG_0009 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SOPEG_0007 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SOPEG_0011 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SOPEG_0004 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOPEG_0006 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SOPEG_0005 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOPEG_1238 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SOPEG_3028 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pes00710]
D SOPEG_3887 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOPEG_1465 gapA; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOPEG_0342 Tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_3888 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_2991 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOPEG_3893 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SOPEG_0911 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOPEG_0270 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SOPEG_2990 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SOPEG_2696 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOPEG_0286 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Other carbon fixation pathways [PATH:pes00720]
D SOPEG_2696 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOPEG_2341 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SOPEG_0689 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOPEG_0690 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOPEG_0687 sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOPEG_0688 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOPEG_0694 sucD; Succinyl-CoA synthetase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOPEG_0693 sucC; Succinyl-CoA synthetase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOPEG_3963 icd; Isocitrate dehydrogenase [NADP] Monomeric isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOPEG_3383 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOPEG_3692 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOPEG_3691 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOPEG_2873 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOPEG_3955 folD; Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SOPEG_2856 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOPEG_2855 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:pes00680]
D SOPEG_3118 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOPEG_1012 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOPEG_2696 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOPEG_0342 Tagatose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_3888 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOPEG_2855 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOPEG_2856 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOPEG_0483 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOPEG_3894 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOPEG_2045 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOPEG_1282 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pes00910]
D SOPEG_3505 gdhA; NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOPEG_3351 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOPEG_0178 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:pes00920]
D SOPEG_0910 sbp; Sulfate-binding protein Sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SOPEG_2984 cysU; sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D SOPEG_2983 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D SOPEG_2982 cysA; Sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SOPEG_1021 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOPEG_1020 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOPEG_1022 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SOPEG_1230 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SOPEG_1017 cysH; Phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SOPEG_1015 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SOPEG_1016 cysI; Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SOPEG_0302 glpE; Thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D SOPEG_0898 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SOPEG_3999 Putative cysteine synthase/cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOPEG_4042 putative Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOPEG_2972 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOPEG_2693 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pes00061]
D SOPEG_3383 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOPEG_3692 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOPEG_3691 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOPEG_2873 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOPEG_2147 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SOPEG_2145 fabD; malonyl CoA-(acyl-carrier-protein) transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOPEG_2144 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOPEG_2882 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SOPEG_2148 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOPEG_2146 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOPEG_1616 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SOPEG_3388 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOPEG_2551 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pes00561]
D SOPEG_3716 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SOPEG_3655 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SOPEG_2143 plsX; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SOPEG_1181 ygiH; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOPEG_0653 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOPEG_0616 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:pes00564]
D SOPEG_0897 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SOPEG_3655 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SOPEG_1181 ygiH; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOPEG_0653 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOPEG_0616 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SOPEG_0320 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SOPEG_3393 cdsA; CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SOPEG_1972 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SOPEG_1103 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SOPEG_1829 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SOPEG_4024 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D SOPEG_2539 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D SOPEG_2170 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pes00565]
D SOPEG_0320 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D SOPEG_0320 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D SOPEG_0320 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pes00592]
D SOPEG_0320 pldA; Outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D SOPEG_2512 yciA; Acyl-CoA thioesterase YciA involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pes00230]
D SOPEG_1165 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SOPEG_0281 nudE; adenosine nucleotide hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D SOPEG_1285 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SOPEG_2484 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOPEG_2869 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SOPEG_3545 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SOPEG_3024 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SOPEG_3123 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SOPEG_3023 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SOPEG_3962 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SOPEG_3961 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SOPEG_3014 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SOPEG_2312 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SOPEG_3980 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SOPEG_1028 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SOPEG_1284 deoD; Purine nucleoside phosphorylase deoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SOPEG_3185 yaiE2; Cytoplasmic protein YaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SOPEG_0753 yfiH; yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SOPEG_0940 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SOPEG_3081 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SOPEG_3107 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SOPEG_3861 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SOPEG_0809 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SOPEG_3940 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOPEG_3080 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOPEG_1411 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOPEG_2051 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SOPEG_3337 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SOPEG_2810 nrdA; Ribonucleotide reductase of class Ia (aerobic) alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOPEG_2809 nrdB; Ribonucleotide reductase of class Ia (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOPEG_1985 nrdF; Ribonucleotide reductase of class Ib (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOPEG_0994 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D SOPEG_2852 yfbR; Nucleotidase YfbR HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D SOPEG_0387 gppA; Guanosine-5'-triphosphate-3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SOPEG_1009 relA; GTP pyrophosphokinase (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D SOPEG_0332 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D SOPEG_1217 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SOPEG_2344 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SOPEG_3409 ygdH; Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SOPEG_3975 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOPEG_1010 mazG; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOPEG_1163 cpdA; 3'5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D SOPEG_1377 apaH; Bis(5'-nucleosyl)-tetraphosphatase symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D SOPEG_1022 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SOPEG_1021 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOPEG_1020 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:pes00240]
D SOPEG_1375 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOPEG_1374 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOPEG_2114 pyrI; Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D SOPEG_1625 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SOPEG_0866 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SOPEG_2542 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SOPEG_3397 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SOPEG_3107 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SOPEG_1010 mazG; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOPEG_3151 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D SOPEG_1011 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SOPEG_2047 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SOPEG_1028 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SOPEG_3622 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D SOPEG_3185 yaiE2; Cytoplasmic protein YaiE K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SOPEG_3022 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOPEG_3409 ygdH; Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SOPEG_2738 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SOPEG_2726 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SOPEG_2810 nrdA; Ribonucleotide reductase of class Ia (aerobic) alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOPEG_2809 nrdB; Ribonucleotide reductase of class Ia (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOPEG_1985 nrdF; Ribonucleotide reductase of class Ib (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOPEG_2852 yfbR; Nucleotidase YfbR HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D SOPEG_2151 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SOPEG_0868 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SOPEG_3439 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pes00250]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_3220 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SOPEG_1461 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SOPEG_0552 iaaA; Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SOPEG_0668 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOPEG_2329 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOPEG_2700 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOPEG_1217 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SOPEG_2312 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SOPEG_2114 pyrI; Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D SOPEG_0178 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SOPEG_3505 gdhA; NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOPEG_2583 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SOPEG_3351 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOPEG_1375 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOPEG_1374 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOPEG_0017 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOPEG_2869 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pes00260]
D SOPEG_1355 thrA; Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SOPEG_0311 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOPEG_1356 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SOPEG_1357 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SOPEG_3118 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOPEG_0483 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOPEG_3894 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOPEG_2045 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOPEG_1282 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SOPEG_3901 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_3902 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SOPEG_1972 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SOPEG_1672 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SOPEG_2521 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pes00270]
D SOPEG_0898 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SOPEG_3999 Putative cysteine synthase/cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOPEG_4042 putative Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOPEG_2972 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SOPEG_3883 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOPEG_0642 ypeI; N-acylhomoserine lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D SOPEG_0753 yfiH; yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SOPEG_1158 12-dihydroxy-3-keto-5-methylthiopentene dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D SOPEG_1704 yebR; GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SOPEG_1355 thrA; Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SOPEG_0311 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOPEG_2693 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SOPEG_0393 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOPEG_1066 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SOPEG_3877 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1672 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SOPEG_3894 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOPEG_2045 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pes00280]
D SOPEG_0393 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pes00290]
D SOPEG_2084 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SOPEG_2082 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SOPEG_2079 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOPEG_0394 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SOPEG_0389 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOPEG_0393 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:pes00300]
D SOPEG_1355 thrA; Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SOPEG_0311 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOPEG_3016 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SOPEG_1373 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SOPEG_3402 dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SOPEG_0257 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOPEG_3005 dapE; N-succinyl-L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SOPEG_0330 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SOPEG_3459 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SOPEG_2072 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOPEG_2071 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pes00310]
D SOPEG_0692 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_3382 ldcC; Lysine decarboxylase inducible K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
C 00220 Arginine biosynthesis [PATH:pes00220]
D SOPEG_2117 argI; ornithine carbamoyltransferase subunit I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SOPEG_2329 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOPEG_2700 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOPEG_3351 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOPEG_1375 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOPEG_1374 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOPEG_3505 gdhA; NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_3431 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D SOPEG_2699 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SOPEG_2698 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SOPEG_0257 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOPEG_2697 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pes00330]
D SOPEG_1695 speB1; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D SOPEG_3852 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SOPEG_0856 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D SOPEG_3864 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SOPEG_2583 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism [PATH:pes00380]
D SOPEG_0692 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_2280 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pes00400]
D SOPEG_0747 aroF; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SOPEG_0273 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SOPEG_3693 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SOPEG_0352 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SOPEG_3182 aroL2; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SOPEG_0274 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SOPEG_0820 aroL1; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SOPEG_2046 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SOPEG_2888 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SOPEG_2521 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SOPEG_0748 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D SOPEG_0749 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D SOPEG_3261 pheC; Cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pes00410]
D SOPEG_0946 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SOPEG_0947 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:pes00430]
D SOPEG_3628 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOPEG_2856 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOPEG_2855 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pes00450]
D SOPEG_2693 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SOPEG_2385 sufS; Cysteine desulfurase SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SOPEG_2030 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SOPEG_1021 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOPEG_1020 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOPEG_2730 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pes00460]
D SOPEG_3628 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOPEG_1461 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SOPEG_0552 iaaA; Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SOPEG_3118 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pes00470]
D SOPEG_1649 alr; Alanine racemase catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D SOPEG_0490 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOPEG_2708 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SOPEG_2069 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOPEG_0330 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SOPEG_3459 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SOPEG_1553 aldH; Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00480 Glutathione metabolism [PATH:pes00480]
D SOPEG_3628 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOPEG_1718 ybgL; Lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D SOPEG_0684 ybgJ; Allophanate hydrolase 2 subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D SOPEG_0685 ybgK; Allophanate hydrolase 2 subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D SOPEG_1066 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SOPEG_3877 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SOPEG_2123 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SOPEG_1626 pepN; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SOPEG_0810 pepD; Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D SOPEG_2819 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOPEG_4046 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SOPEG_3963 icd; Isocitrate dehydrogenase [NADP] Monomeric isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOPEG_1960 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SOPEG_2572 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SOPEG_2404 btuE; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SOPEG_2701 putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D SOPEG_3852 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pes00540]
D SOPEG_3387 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SOPEG_2062 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SOPEG_3389 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SOPEG_3959 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SOPEG_3386 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SOPEG_2665 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SOPEG_0161 kdsD; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SOPEG_2477 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SOPEG_0111 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SOPEG_2663 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SOPEG_1422 lpxL; Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SOPEG_2620 lpxM; Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SOPEG_3211 arnT2; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SOPEG_0622 arnT1; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SOPEG_1130 lpxP; Lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D SOPEG_0774 gmhA; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SOPEG_1173 rfaE; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SOPEG_3366 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SOPEG_0889 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SOPEG_0887 waaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SOPEG_0888 waaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SOPEG_0881 yibD; putative glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D SOPEG_0877 waaG; UDP-glucose:(heptosyl) LPS alpha1-3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pes00542]
D SOPEG_0383 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pes00541]
D SOPEG_1451 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOPEG_0486 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOPEG_1450 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOPEG_1449 uge; dTDP-glucose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SOPEG_0378 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOPEG_0379 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SOPEG_0376 rffA; TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D SOPEG_0377 rffC; TDP-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D SOPEG_2342 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SOPEG_1953 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SOPEG_1952 cpsB; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SOPEG_0016 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SOPEG_0381 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SOPEG_0380 rffD; UDP-glucose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:pes00550]
D SOPEG_0169 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOPEG_3602 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOPEG_2066 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SOPEG_2069 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOPEG_2072 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOPEG_0490 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOPEG_2071 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SOPEG_3394 ispU; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOPEG_2070 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOPEG_2067 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SOPEG_0183 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SOPEG_0957 mrcB; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SOPEG_1141 mrdA; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOPEG_2073 ftsI; essential cell division protein FtsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SOPEG_0563 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOPEG_1138 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:pes00552]
D SOPEG_0383 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pes00543]
D SOPEG_0383 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SOPEG_0373 rffM; putative UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D SOPEG_0898 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pes00730]
D SOPEG_3553 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SOPEG_3054 thiD; hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SOPEG_3111 iscS; Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOPEG_4019 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SOPEG_4022 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SOPEG_3055 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SOPEG_3554 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SOPEG_4025 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SOPEG_1102 rsgA; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SOPEG_3975 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOPEG_1555 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pes00740]
D SOPEG_2538 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SOPEG_4028 ribD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SOPEG_0327 yigB; flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D SOPEG_1171 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D SOPEG_4027 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SOPEG_2374 ribC; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SOPEG_1367 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SOPEG_3611 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D SOPEG_3055 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SOPEG_1165 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SOPEG_2315 nudJ; Nudix-like NDP and NTP phosphohydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D SOPEG_2868 ubiX2; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pes00750]
D SOPEG_2363 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SOPEG_2361 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SOPEG_2879 pdxB; Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D SOPEG_2045 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOPEG_1380 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SOPEG_3135 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SOPEG_1357 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pes00760]
D SOPEG_3220 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SOPEG_0708 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SOPEG_2686 nadC; Quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SOPEG_1284 deoD; Purine nucleoside phosphorylase deoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SOPEG_1280 nadR; NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase NadR family / Ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SOPEG_1028 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SOPEG_1144 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SOPEG_1010 mazG; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOPEG_3551 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D SOPEG_2273 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SOPEG_1056 ygaD; Protein Implicated in DNA repair function with RecA and MutS K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SOPEG_3228 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SOPEG_2703 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D SOPEG_2258 pntA1; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SOPEG_2433 pntA2; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SOPEG_2259 pntB1; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SOPEG_2432 pntB2; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pes00770]
D SOPEG_2079 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOPEG_0394 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SOPEG_0389 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOPEG_0948 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SOPEG_3713 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SOPEG_0947 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SOPEG_3599 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SOPEG_0869 dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SOPEG_1010 mazG; Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SOPEG_0874 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SOPEG_2052 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SOPEG_3134 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SOPEG_3201 acpH1; Acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D SOPEG_0393 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOPEG_0946 panD; aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:pes00780]
D SOPEG_2882 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SOPEG_2148 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOPEG_2146 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOPEG_3388 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOPEG_2551 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOPEG_3601 birA; Biotin-protein ligase / Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pes00785]
D SOPEG_1136 lipB; Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SOPEG_1135 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SOPEG_2401 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_2671 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOPEG_2670 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOPEG_0691 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SOPEG_0692 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOPEG_3901 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOPEG_3902 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pes00790]
D SOPEG_2753 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SOPEG_2611 nudB; Dihydroneopterin triphosphate pyrophosphohydolase type 2 K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D SOPEG_1180 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SOPEG_0950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SOPEG_1258 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SOPEG_1376 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SOPEG_2872 folC; Dihydrofolate synthase / Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SOPEG_2538 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SOPEG_0258 pabA; Para-aminobenzoate synthase amidotransferase component K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D SOPEG_1670 pabB; Para-aminobenzoate synthase aminase component K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SOPEG_2149 pabC; Aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SOPEG_1013 ygcF; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SOPEG_0504 moaA; Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
C 00670 One carbon pool by folate [PATH:pes00670]
D SOPEG_1376 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SOPEG_3955 folD; Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SOPEG_3118 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOPEG_3024 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SOPEG_0358 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SOPEG_3901 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOPEG_3439 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SOPEG_3895 ygfA; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pes00860]
D SOPEG_2927 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOPEG_2481 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SOPEG_0986 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOPEG_1510 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SOPEG_0333 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SOPEG_0334 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SOPEG_2988 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SOPEG_3607 hemG; Protoporphyrinogen IX oxidase oxygen-independent HemG K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D SOPEG_3974 hemH; Ferrochelatase protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SOPEG_0335 hemX; putative uroporphyrinogen III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SOPEG_1019 cysG; Siroheme synthase / Precorrin-2 oxidase / Sirohydrochlorin ferrochelatase / Uroporphyrinogen-III methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D SOPEG_4014 cyoE; Heme O synthase protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SOPEG_0098 bfrA; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pes00130]
D SOPEG_3656 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SOPEG_3612 ubiD; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D SOPEG_2868 ubiX2; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SOPEG_3900 visC; 2-octaprenyl-3-methyl-6-methoxy-1 4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D SOPEG_2811 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D SOPEG_3899 ubiH; Ubiquinone biosynthesis monooxygenase UbiH/COQ6, 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D SOPEG_3619 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SOPEG_2006 ubiF; Ubiquinone biosynthesis monooxygenase UbiF/COQ7/2-octaprenyl-3-methyl-6-methoxy-12C4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pes00900]
D SOPEG_4022 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SOPEG_3395 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SOPEG_1025 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SOPEG_2483 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SOPEG_1026 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SOPEG_3103 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SOPEG_1371 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SOPEG_2868 ubiX2; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SOPEG_4021 ispA; Geranyltranstransferase (farnesyldiphosphate synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SOPEG_1247 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SOPEG_3394 ispU; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SOPEG_2991 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pes00523]
D SOPEG_0378 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOPEG_0379 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D SOPEG_0379 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:pes00261]
D SOPEG_1021 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOPEG_1020 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOPEG_1355 thrA; Aspartokinase / Homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SOPEG_0311 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOPEG_3016 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SOPEG_1373 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pes00521]
D SOPEG_3114 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SOPEG_0378 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOPEG_0379 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:pes00525]
D SOPEG_0378 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOPEG_0379 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pes00401]
D SOPEG_0748 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D SOPEG_2145 fabD; malonyl CoA-(acyl-carrier-protein) transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOPEG_2146 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOPEG_2551 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SOPEG_2147 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pes00999]
D SOPEG_3883 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOPEG_0352 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D SOPEG_2868 ubiX2; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:pes00364]
D SOPEG_3623 ysgA; Putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pes00361]
D SOPEG_3623 ysgA; Putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:pes00623]
D SOPEG_3623 ysgA; Putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D SOPEG_2323 ThiJ/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pes03020]
D SOPEG_3587 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOPEG_3586 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOPEG_0071 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SOPEG_3338 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pes03010]
D SOPEG_2048 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D SOPEG_3399 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D SOPEG_0090 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D SOPEG_0072 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D SOPEG_0079 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D SOPEG_1222 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D SOPEG_0238 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SOPEG_0082 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D SOPEG_0175 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D SOPEG_0097 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D SOPEG_0073 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D SOPEG_0239 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D SOPEG_0074 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D SOPEG_0083 rpsN; SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D SOPEG_1268 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D SOPEG_1071 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D SOPEG_0087 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D SOPEG_1224 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SOPEG_0092 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D SOPEG_1366 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SOPEG_1183 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D SOPEG_3590 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D SOPEG_0093 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D SOPEG_0096 rplC; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D SOPEG_0095 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D SOPEG_0084 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D SOPEG_0081 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D SOPEG_3588 rplL; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SOPEG_1225 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D SOPEG_3589 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SOPEG_3591 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D SOPEG_0174 rplM; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D SOPEG_0086 rplN; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D SOPEG_0077 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D SOPEG_0089 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D SOPEG_0070 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D SOPEG_0080 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D SOPEG_1074 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D SOPEG_2409 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D SOPEG_1248 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D SOPEG_0091 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D SOPEG_0094 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D SOPEG_0085 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D SOPEG_2797 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D SOPEG_1249 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D SOPEG_0871 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D SOPEG_0088 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D SOPEG_0078 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D SOPEG_0926 rpmE1; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SOPEG_3986 rpmE2; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SOPEG_2142 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SOPEG_0872 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SOPEG_4123 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D SOPEG_2410 rpmI; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D SOPEG_3987 rpmJ2; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SOPEG_0075 rpmJ1; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SOPEG_r2709 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r4141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3606 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3543 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOPEG_r4139 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOPEG_r3539 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOPEG_r4137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pes00970]
D SOPEG_t2926 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOPEG_t3541 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOPEG_t3604 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOPEG_t1063 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t3954 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t0372 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t2908 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t1538 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SOPEG_t1900 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SOPEG_t4136 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SOPEG_t0766 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SOPEG_t1826 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SOPEG_t0662 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SOPEG_t0665 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SOPEG_t4140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SOPEG_t3596 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOPEG_t1100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOPEG_t1201 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOPEG_t0371 tRNA-His K14226 tRNA-His; tRNA His
D SOPEG_t3542 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOPEG_t3605 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOPEG_t0666 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t2128 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t0370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t1298 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t1261 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t1825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t0707 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SOPEG_t2929 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SOPEG_t1262 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t0663 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t0667 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t1187 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t3425 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t0724 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SOPEG_t1078 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SOPEG_t0441 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOPEG_t2804 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOPEG_t0369 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOPEG_t1592 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t1897 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t2585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t1062 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t3595 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOPEG_t3598 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOPEG_t0795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOPEG_t4135 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SOPEG_t3597 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SOPEG_t1455 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SOPEG_t2376 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOPEG_t2928 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOPEG_2927 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOPEG_0673 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SOPEG_1060 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOPEG_2610 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOPEG_1628 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SOPEG_4097 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SOPEG_4098 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SOPEG_2412 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOPEG_2035 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOPEG_3957 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOPEG_2730 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOPEG_0358 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SOPEG_2121 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOPEG_1147 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOPEG_1368 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOPEG_3914 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOPEG_2601 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOPEG_3372 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOPEG_3102 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOPEG_2408 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOPEG_2407 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOPEG_2362 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOPEG_0268 trpS; tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pes03060]
D SOPEG_0076 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SOPEG_3593 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOPEG_1260 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOPEG_3196 secF1; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOPEG_3198 yajC1; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_3287 yajC2; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_4120 yidC; Inner membrane protein translocase component YidC long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOPEG_2059 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOPEG_0896 secB; Protein export cytoplasm chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D SOPEG_1070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOPEG_3640 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SOPEG_3616 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D SOPEG_3615 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SOPEG_3614 tatC; twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SOPEG_1134 tatE; twin-arginine translocation protein, TatA/E family subunit K03425 tatE; sec-independent protein translocase protein TatE
D SOPEG_3139 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SOPEG_1369 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pes04122]
D SOPEG_3111 iscS; Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOPEG_3645 tusA; tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SOPEG_0240 tusB; tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SOPEG_0241 tusC; tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SOPEG_0242 tusD; tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SOPEG_1594 tusE; tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SOPEG_2314 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SOPEG_0504 moaA; Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SOPEG_4019 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SOPEG_3556 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pes03018]
D SOPEG_3442 nudH; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SOPEG_2138 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SOPEG_0386 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SOPEG_1012 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOPEG_1269 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SOPEG_0511 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SOPEG_1218 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOPEG_0384 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOPEG_1363 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SOPEG_1086 groEL2; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_0732 groEL1; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_1209 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SOPEG_3028 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SOPEG_0951 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pes03030]
D SOPEG_1802 holE; DNA polymerase III theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SOPEG_0765 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOPEG_3384 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOPEG_3979 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOPEG_2152 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOPEG_1145 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOPEG_1296 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SOPEG_2122 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOPEG_4125 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOPEG_1319 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SOPEG_1184 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SOPEG_1325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOPEG_0764 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOPEG_3385 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SOPEG_3358 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOPEG_2942 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pes03410]
D SOPEG_2359 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SOPEG_3226 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SOPEG_3855 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SOPEG_0873 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SOPEG_2129 nei; endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SOPEG_1919 alkA; DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOPEG_1456 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SOPEG_2765 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SOPEG_3358 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOPEG_3912 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOPEG_2942 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pes03420]
D SOPEG_2303 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SOPEG_1324 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SOPEG_0502 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SOPEG_1830 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SOPEG_0325 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOPEG_3358 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOPEG_2942 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pes03430]
D SOPEG_1032 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SOPEG_1207 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D SOPEG_3445 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D SOPEG_0325 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOPEG_1930 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SOPEG_3082 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SOPEG_4020 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SOPEG_3912 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOPEG_1325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOPEG_3384 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOPEG_4125 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOPEG_3979 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOPEG_1145 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOPEG_2152 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOPEG_0765 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOPEG_1802 holE; DNA polymerase III theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SOPEG_2122 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOPEG_1296 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SOPEG_2942 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOPEG_3559 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3575 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3177 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1961 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0657 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0271 dam; Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1153 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pes03440]
D SOPEG_3912 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOPEG_1325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOPEG_3977 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SOPEG_1058 recA; recombinase A K03553 recA; recombination protein RecA
D SOPEG_3358 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOPEG_2613 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SOPEG_3433 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SOPEG_3435 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SOPEG_3432 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SOPEG_3384 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOPEG_4125 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOPEG_3979 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOPEG_1145 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOPEG_2152 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOPEG_0765 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOPEG_1802 holE; DNA polymerase III theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SOPEG_2122 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOPEG_1296 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SOPEG_0925 priA; primosomal protein N' factor K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SOPEG_1223 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D SOPEG_3981 priC; primosomal replication protein N K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pes02010]
D SOPEG_0910 sbp; Sulfate-binding protein Sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SOPEG_2984 cysU; sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D SOPEG_2983 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D SOPEG_2982 cysA; Sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SOPEG_1558 Hydroxymethylpyrimidine ABC transporter substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D SOPEG_1557 Hydroxymethylpyrimidine ABC transporter transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D SOPEG_1556 Hydroxymethylpyrimidine ABC transporter ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D SOPEG_0487 modF; putative molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D SOPEG_0570 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D SOPEG_0573 potI; putrescine transporter subunit: membrane component of ABC superfamily K11074 potI; putrescine transport system permease protein
D SOPEG_0572 potH; putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein
D SOPEG_0571 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SOPEG_1980 proX1; glycine betaine / proline ABC transporter - periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SOPEG_1982 proW; glycine betaine / proline ABC transporter - membrane subunit K02001 proW; glycine betaine/proline transport system permease protein
D SOPEG_0166 mlaC; putative ABC transporter auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D SOPEG_0165 mlaD; putative ABC transporter periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOPEG_0164 mlaE; putative ABC transporter permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOPEG_0167 mlaB; Uncharacterized protein YrbB K07122 mlaB; phospholipid transport system transporter-binding protein
D SOPEG_0163 mlaF; putative ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SOPEG_2937 med; Basic membrane protein B precursor K07335 bmpA; basic membrane protein A and related proteins
D SOPEG_2939 yufP; ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D SOPEG_2940 yufQ; ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D SOPEG_2348 araF; L-arabinose-binding periplasmic protein precursor AraF K10537 araF; L-arabinose transport system substrate-binding protein
D SOPEG_4076 ytfT; putative ABC transporter permease protein K23509 ytfT; galactofuranose transport system permease protein
D SOPEG_1490 Glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SOPEG_1487 N-Acetyl-D-glucosamine ABC transport system permease protein 2 K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SOPEG_1489 putative sugar ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D SOPEG_3025 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SOPEG_2861 hisP; Histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_2015 artI; Arginine ABC transporter periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D SOPEG_2016 artP; Arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_1152 gltI; Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SOPEG_1150 gltK; Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D SOPEG_1151 gltJ; Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D SOPEG_1149 gltL; Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_3918 extracellular solute-binding protein family 3 K10018 occT; octopine/nopaline transport system substrate-binding protein
D SOPEG_3429 Amino acid ABC transporter periplasmic amino acid-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D SOPEG_3916 polar amino acid ABC transporter, inner membrane subunit K10020 occQ; octopine/nopaline transport system permease protein
D SOPEG_3529 Amino acid ABC transporter periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D SOPEG_3535 yhdX; amino-acid transporter subunit ; membrane component of ABC superfamily protein K09970 aapQ; general L-amino acid transport system permease protein
D SOPEG_3537 yhdZ; ABC-type polar amino acid transport system ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_1055 Cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D SOPEG_0631 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D SOPEG_3369 metQ; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SOPEG_3368 metI; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SOPEG_3367 metN; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SOPEG_0449 dppD; Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D SOPEG_2555 sapB; antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein
D SOPEG_2554 sapC; antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D SOPEG_2552 sapF; antimicrobial peptide ABC system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D SOPEG_0555 gsiC; glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein
D SOPEG_2777 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D SOPEG_2779 yejF; microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein
D SOPEG_0983 fhuC; Ferric hydroxamate ABC transporter ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D SOPEG_2618 znuA; Zinc ABC transporter periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D SOPEG_2616 znuB; Zinc ABC transporter inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D SOPEG_2617 znuC; Zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SOPEG_2333 chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D SOPEG_1780 sitD; Manganese ABC transporter inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D SOPEG_1954 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D SOPEG_1955 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D SOPEG_2304 lolC; Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D SOPEG_2306 lolE; Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D SOPEG_2305 lolD; Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SOPEG_2903 ccmD; Cytochrome c-type biogenesis protein CcmD interacts with CcmCE K02196 ccmD; heme exporter protein D
D SOPEG_2904 ccmC; Cytochrome c-type biogenesis protein CcmC putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D SOPEG_2906 ccmA; ABC transporter involved in cytochrome c biogenesis ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SOPEG_2124 lptF; lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D SOPEG_0114 lptB; Lipopolysaccharide ABC transporter ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SOPEG_3638 ftsX; cell division ABC transporter subunit FtsX K09811 ftsX; cell division transport system permease protein
D SOPEG_3639 ftsE; Cell division transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SOPEG_2666 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SOPEG_3998 mdlA; putative multidrug transporter membrane\ATP-binding components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOPEG_3997 mdlB; putative multidrug transporter membrane\ATP-binding components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOPEG_2028 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SOPEG_2029 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:pes02060]
D SOPEG_2974 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SOPEG_2973 ptsH; PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr K02784 ptsH; phosphocarrier protein HPr
D SOPEG_2975 crr; PTS system glucose-specific transporter subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SOPEG_2154 ptsG; PTS system glucose-specific transporter subunits IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SOPEG_0672 nagE; PTS system N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SOPEG_3068 putative PTS system galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SOPEG_3066 putative PTS system galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SOPEG_2768 fruB; Fructose-specific phosphocarrier protein HPr / PTS system fructose-specific IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SOPEG_2767 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SOPEG_3441 ptsP; Phosphocarrier protein kinase/phosphorylase2C nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SOPEG_0119 npr; Phosphocarrier protein nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D SOPEG_0117 ptsN; PTS system nitrogen-specific IIA component PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pes03070]
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_1740 ssaG; type III secretion system needle protein SsaG K03221 yscF; type III secretion protein F
D SOPEG_1750 ssaC; Type III secretion system apparatus SsaC K03219 yscC; type III secretion protein C
D SOPEG_1737 ssaJ; type III secretion system lipoprotein SsaJ K03222 yscJ; type III secretion protein J
D SOPEG_1727 ssaR; Type III secretion inner membrane protein K03226 yscR; type III secretion protein R
D SOPEG_1726 ssaS; Type III secretion inner membrane protein K03227 yscS; type III secretion protein S
D SOPEG_1724 ssaU; Type III secretion inner membrane protein K03229 yscU; type III secretion protein U
D SOPEG_1732 ssaV; Type III secretion inner membrane channel protein K03230 yscV; type III secretion protein V
D SOPEG_3742 invA; type III secretion system protein InvA K03230 yscV; type III secretion protein V
D SOPEG_1731 ssaN; Type III secretion cytoplasmic ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D SOPEG_3747 spaO; type III secretion apparatus SpaO K03225 yscQ; type III secretion protein Q
D SOPEG_1728 ssaQ; Type III secretion inner membrane protein K03225 yscQ; type III secretion protein Q
D SOPEG_3196 secF1; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOPEG_3593 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOPEG_1260 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOPEG_0076 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SOPEG_3198 yajC1; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_3287 yajC2; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_4120 yidC; Inner membrane protein translocase component YidC long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOPEG_2059 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOPEG_3640 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SOPEG_0896 secB; Protein export cytoplasm chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D SOPEG_1070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOPEG_3616 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D SOPEG_3615 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SOPEG_3614 tatC; twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SOPEG_1134 tatE; twin-arginine translocation protein, TatA/E family subunit K03425 tatE; sec-independent protein translocase protein TatE
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pes02020]
D SOPEG_0833 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOPEG_2310 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SOPEG_2311 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SOPEG_0287 envZ; Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SOPEG_0288 ompR; Two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SOPEG_2818 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C
D SOPEG_0900 cpxA; Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SOPEG_0901 cpxR; Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SOPEG_0199 yqjB1; EnvZ/OmpR regulon moderator K25864 mzrA; modulator protein MzrA
D SOPEG_1398 yqjB2; EnvZ/OmpR regulon moderator K25864 mzrA; modulator protein MzrA
D SOPEG_2437 rstA2; DNA-binding transcriptional regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D SOPEG_0995 degP; HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOPEG_3046 baeR; Response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SOPEG_3207 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SOPEG_1517 czcS; Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOPEG_2089 Cobalt/zinc/cadmium efflux RND transporter membrane fusion protein CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D SOPEG_3773 flhD2; Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOPEG_0438 flhC1; Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOPEG_0445 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SOPEG_0181 arcB; Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SOPEG_1354 arcA; Aerobic respiration control protein arcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D SOPEG_4124 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOPEG_1537 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D SOPEG_1312 rcsA1; positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SOPEG_2814 rcsB; DNA-binding capsular synthesis response regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SOPEG_1007 barA; BarA sensory histidine kinase (VarS GacS) K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SOPEG_1831 uvrY; BarA-associated response regulator UvrY ( GacA SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SOPEG_1061 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D SOPEG_3119 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D SOPEG_3353 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SOPEG_3351 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOPEG_3120 glrR; DNA-binding transcriptional activator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SOPEG_3779 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D SOPEG_3778 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOPEG_3785 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOPEG_1752 ssrA; Secretion system regulator: Sensor component K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D SOPEG_1753 ssrB; Secretion system regulator of DegU/UvrY/BvgA type K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D SOPEG_1149 gltL; Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_1150 gltK; Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D SOPEG_1151 gltJ; Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D SOPEG_1152 gltI; Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SOPEG_0253 crp; Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOPEG_0696 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SOPEG_0697 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SOPEG_0698 ybgT; ybgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_0381 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SOPEG_0380 rffD; UDP-glucose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SOPEG_0431 flgM1; anti-sigma factor for FliA (sigma 28) K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOPEG_3791 flgM2; anti-sigma factor for FliA (sigma 28) K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D SOPEG_3852 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pes02024]
D SOPEG_1209 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SOPEG_0747 aroF; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SOPEG_3120 glrR; DNA-binding transcriptional activator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SOPEG_3773 flhD2; Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOPEG_0438 flhC1; Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOPEG_3670 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SOPEG_3472 spermidine/putrescine ABC transporter periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SOPEG_3470 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SOPEG_3668 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SOPEG_3666 ABC transporter-related protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SOPEG_0631 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D SOPEG_0642 ypeI; N-acylhomoserine lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D SOPEG_3056 yenR; Quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SOPEG_0641 ypeR; Quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SOPEG_1312 rcsA1; positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SOPEG_0253 crp; Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOPEG_1311 zur; zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SOPEG_2538 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SOPEG_4028 ribD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SOPEG_2277 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SOPEG_3307 oligopeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SOPEG_4120 yidC; Inner membrane protein translocase component YidC long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOPEG_3593 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOPEG_1260 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOPEG_0076 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SOPEG_3198 yajC1; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_3287 yajC2; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_2059 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOPEG_3640 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SOPEG_0896 secB; Protein export cytoplasm chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D SOPEG_1070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pes02030]
D SOPEG_3778 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOPEG_3779 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D SOPEG_3785 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOPEG_0407 fliG1; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOPEG_0413 fliM1; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOPEG_3810 fliM2; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOPEG_0414 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_3809 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_0435 motB1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_3777 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pes02040]
D SOPEG_0406 fliF1; flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D SOPEG_0407 fliG1; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOPEG_0408 fliH1; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOPEG_0409 fliI1; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOPEG_0411 fliK1; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SOPEG_0412 fliL1; Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D SOPEG_3811 fliL2; flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D SOPEG_0413 fliM1; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOPEG_3810 fliM2; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOPEG_0414 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_3809 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_0415 fliO1; flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOPEG_0416 fliP1; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOPEG_0418 fliR1; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOPEG_0433 flhA1; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOPEG_3792 flgA2; flagellar biosynthesis; assembly of basal-body periplasmic P ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SOPEG_3793 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOPEG_3794 flgC2; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOPEG_0427 flgD1; flagellar biosynthesis, initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOPEG_3795 flgD2; flagellar biosynthesis, initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOPEG_0426 flgE1; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SOPEG_0425 flgF1; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOPEG_0424 flgG1; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOPEG_0422 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D SOPEG_0420 flgK1; flagellar biosynthesis, hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1
D SOPEG_3801 flgK2; flagellar biosynthesis, hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1
D SOPEG_0419 flgL1; flagellar biosynthesis; hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOPEG_3802 flgL2; flagellar biosynthesis; hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOPEG_0435 motB1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_3777 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_0431 flgM1; anti-sigma factor for FliA (sigma 28) K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOPEG_3791 flgM2; anti-sigma factor for FliA (sigma 28) K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOPEG_0432 flgN1; flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D SOPEG_1055 Cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D SOPEG_1185 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SOPEG_3773 flhD2; Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOPEG_0438 flhC1; Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOPEG_0445 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SOPEG_1012 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pes01501]
D SOPEG_2818 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C
D SOPEG_1778 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SOPEG_3984 acrA; acriflavin efflux protein AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D SOPEG_3985 acrB2; RND efflux system inner membrane transporter component AcrB K18138 acrB; multidrug efflux pump
D SOPEG_2277 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_1141 mrdA; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOPEG_2073 ftsI; essential cell division protein FtsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pes01502]
D SOPEG_0490 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOPEG_1649 alr; Alanine racemase catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D SOPEG_2071 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SOPEG_2070 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOPEG_2067 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pes01503]
D SOPEG_2310 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SOPEG_2311 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SOPEG_3207 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SOPEG_3208 arnC; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D SOPEG_3209 arnA; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D SOPEG_3210 arnD; 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D SOPEG_3211 arnT2; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SOPEG_0622 arnT1; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SOPEG_3212 arnE; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D SOPEG_3213 arnF; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D SOPEG_2555 sapB; antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein
D SOPEG_2554 sapC; antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D SOPEG_2552 sapF; antimicrobial peptide ABC system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D SOPEG_0900 cpxA; Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SOPEG_0901 cpxR; Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SOPEG_1206 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_3430 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_0995 degP; HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOPEG_3359 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SOPEG_2633 AraC-family transcriptional regulatory protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SOPEG_3984 acrA; acriflavin efflux protein AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D SOPEG_3985 acrB2; RND efflux system inner membrane transporter component AcrB K18138 acrB; multidrug efflux pump
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_3387 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pes01000]
C 01001 Protein kinases [BR:pes01001]
D SOPEG_0833 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOPEG_2310 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SOPEG_0287 envZ; Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SOPEG_0900 cpxA; Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SOPEG_1517 czcS; Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOPEG_0181 arcB; Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SOPEG_1007 barA; BarA sensory histidine kinase (VarS GacS) K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SOPEG_3778 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOPEG_1752 ssrA; Secretion system regulator: Sensor component K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:pes01009]
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOPEG_3976 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D SOPEG_1282 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pes01002]
D SOPEG_1369 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SOPEG_3940 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOPEG_3080 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOPEG_1411 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOPEG_2774 spr; outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SOPEG_2402 nlpC; putative lipoprotein nlpC precursor K13695 nlpC; probable lipoprotein NlpC
D SOPEG_2869 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SOPEG_0017 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOPEG_0668 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOPEG_2323 ThiJ/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SOPEG_1586 ybiS; L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
D SOPEG_1626 pepN; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SOPEG_4040 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D SOPEG_3434 ptrA; Protease III precursor K01407 ptrA; protease III [EC:3.4.24.55]
D SOPEG_2123 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SOPEG_3005 dapE; N-succinyl-L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SOPEG_2308 pepT; Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SOPEG_0810 pepD; Aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D SOPEG_2619 yebA; Cell wall endopeptidase family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SOPEG_3400 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SOPEG_3898 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SOPEG_1018 iap; Alkaline phosphatase isozyme conversion protein precursor K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D SOPEG_1257 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SOPEG_1707 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SOPEG_3019 yfgC; Exported zinc metalloprotease YfgC K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D SOPEG_3392 rseP; Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SOPEG_0995 degP; HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOPEG_0171 degQ; Outer membrane stress sensor protease DegQ serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D SOPEG_0170 degS; Outer membrane stress sensor protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D SOPEG_0563 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOPEG_1138 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOPEG_4006 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SOPEG_4004 lon; ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SOPEG_1615 ycbZ; ATP-dependent protease La Type II K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D SOPEG_3653 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SOPEG_3141 Hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SOPEG_3139 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SOPEG_1706 prc; carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SOPEG_1460 sppA; Protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D SOPEG_2532 sohB; putative protease sohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D SOPEG_3600 pepE; Alpha-aspartyl dipeptidase Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D SOPEG_0301 glpG; intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D SOPEG_1762 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SOPEG_1843 head maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D SOPEG_0922 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SOPEG_0552 iaaA; Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SOPEG_3628 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOPEG_1306 yhbU; peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D SOPEG_1212 hflC; FtsH protease regulator HflC K04087 hflC; modulator of FtsH protease HflC
D SOPEG_1211 hflK; FtsH protease regulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pes01003]
D SOPEG_4062 bcsA2; Cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D SOPEG_0183 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SOPEG_0957 mrcB; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SOPEG_0373 rffM; putative UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D SOPEG_0383 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pes01005]
D SOPEG_3387 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SOPEG_3386 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SOPEG_2062 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SOPEG_3389 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SOPEG_3959 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SOPEG_2665 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SOPEG_1422 lpxL; Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SOPEG_2620 lpxM; Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SOPEG_1130 lpxP; Lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D SOPEG_3211 arnT2; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SOPEG_0622 arnT1; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SOPEG_2477 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SOPEG_2663 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SOPEG_0111 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SOPEG_0161 kdsD; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SOPEG_0887 waaC; ADP-heptose:LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SOPEG_0875 kdtX; Lipopolysaccharide core biosynthesis glycosyl transferase kdtX K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D SOPEG_0888 waaF; ADP-heptose:LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SOPEG_0877 waaG; UDP-glucose:(heptosyl) LPS alpha1-3-glucosyltransferase WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SOPEG_0881 yibD; putative glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D SOPEG_0774 gmhA; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SOPEG_3366 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SOPEG_1173 rfaE; ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SOPEG_0889 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SOPEG_0374 putative common antigen polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D SOPEG_0383 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pes01011]
D SOPEG_0169 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOPEG_3602 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOPEG_2066 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SOPEG_2069 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOPEG_2072 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOPEG_0490 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOPEG_1649 alr; Alanine racemase catabolic K01775 alr; alanine racemase [EC:5.1.1.1]
D SOPEG_2708 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SOPEG_1762 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SOPEG_2070 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOPEG_2067 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SOPEG_2600 murJ; putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOPEG_0957 mrcB; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SOPEG_1141 mrdA; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOPEG_2073 ftsI; essential cell division protein FtsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SOPEG_0563 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOPEG_1138 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOPEG_0183 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SOPEG_1586 ybiS; L,D-transpeptidase YbiS K19235 ybiS; L,D-transpeptidase YbiS
D SOPEG_2774 spr; outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SOPEG_2619 yebA; Cell wall endopeptidase family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SOPEG_3853 mltC; Membrane-bound lytic murein transglycosylase C precursor K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D SOPEG_0761 mltD; Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SOPEG_3124 mltF; membrane-bound lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D SOPEG_2150 yceG; yceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SOPEG_1206 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_3430 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_1125 amiD1; N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_2685 ampD; N-acetylmuramoyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_2379 lpp; major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:pes01004]
D SOPEG_2145 fabD; malonyl CoA-(acyl-carrier-protein) transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOPEG_2144 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOPEG_2882 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SOPEG_2148 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOPEG_2146 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOPEG_1616 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SOPEG_3388 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOPEG_2551 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOPEG_2512 yciA; Acyl-CoA thioesterase YciA involved in membrane biogenesis K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SOPEG_3655 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SOPEG_2143 plsX; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SOPEG_1181 ygiH; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOPEG_0653 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pes01006]
D SOPEG_4021 ispA; Geranyltranstransferase (farnesyldiphosphate synthase) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SOPEG_1247 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SOPEG_3394 ispU; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOPEG_1208 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SOPEG_3656 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SOPEG_4014 cyoE; Heme O synthase protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pes01007]
D SOPEG_2927 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOPEG_0673 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SOPEG_0952 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SOPEG_2362 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOPEG_0268 trpS; tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SOPEG_3957 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOPEG_2601 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOPEG_2730 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOPEG_1368 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOPEG_2121 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOPEG_1147 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOPEG_3914 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOPEG_2610 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOPEG_1628 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SOPEG_3102 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOPEG_4097 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SOPEG_4098 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SOPEG_2035 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOPEG_3372 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOPEG_2412 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOPEG_1060 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOPEG_2408 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOPEG_2407 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOPEG_1701 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_1632 aspC1; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SOPEG_0257 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOPEG_0986 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOPEG_0393 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOPEG_2045 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOPEG_3207 arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SOPEG_0376 rffA; TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pes00194]
D SOPEG_0011 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SOPEG_0010 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SOPEG_0009 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SOPEG_0008 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SOPEG_0007 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SOPEG_0006 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SOPEG_0005 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOPEG_0004 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOPEG_0003 atpI; F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pes03000]
D SOPEG_3869 rhaR; L-rhamnose operon transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D SOPEG_3870 rhaS; L-rhamnose operon regulatory protein RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D SOPEG_2633 AraC-family transcriptional regulatory protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SOPEG_1808 yeaM; Transcriptional regulator AraC family K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D SOPEG_3419 gcvA; DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SOPEG_0390 ilvY; DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D SOPEG_2702 oxyR; DNA-binding transcriptional dual regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SOPEG_2535 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SOPEG_3704 aaeR; Putative transcriptional regulator LYSR-type K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D SOPEG_4074 hdfR; HTH-type transcriptional regulator hdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D SOPEG_3348 deoR; Deoxyribose operon repressor DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SOPEG_0300 glpR; Glycerol-3-phosphate regulon repressor DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SOPEG_3839 transcriptional regulator, DeoR family protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D SOPEG_3087 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D SOPEG_2747 galS; DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SOPEG_2078 fruR; Fructose repressor FruR LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SOPEG_2372 purR; Purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D SOPEG_0314 gntR; Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SOPEG_3827 hypothetical protein K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D SOPEG_1652 fadR; Transcriptional regulator for fatty acid degradation FadR GntR family K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D SOPEG_2672 pdhR; Transcriptional repressor for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SOPEG_3258 uxuR; DNA-binding transcriptional repressor UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D SOPEG_4130 dgoR; D-Galactonate repressor DgoR K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D SOPEG_3983 acrR; Transcription repressor of multidrug efflux pump acrAB operon TetR (AcrR) family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SOPEG_0867 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D SOPEG_0192 nemR; Transcriptional regulator TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SOPEG_3734 ycfQ; Transcriptional regulator TetR family K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D SOPEG_2704 fabR; DNA-binding transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SOPEG_4146 asnC; DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SOPEG_2031 lrp; Leucine-responsive regulatory protein regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOPEG_3056 yenR; Quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SOPEG_0641 ypeR; Quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SOPEG_1312 rcsA1; positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SOPEG_2935 marR; MarR family transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D SOPEG_3164 Transcriptional regulator, MarR family protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SOPEG_2367 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SOPEG_1534 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SOPEG_1647 putative regulatory protein MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SOPEG_1977 mprA; transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D SOPEG_0675 fur; Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SOPEG_1311 zur; zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SOPEG_1709 kdgR; Transcriptional regulator KdgR KDG operon repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SOPEG_1554 transcriptional regulator IclR-like protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SOPEG_0253 crp; Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOPEG_2336 mntR; Mn-dependent transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SOPEG_2573 yebK; Phosphogluconate repressor HexR RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D SOPEG_3601 birA; Biotin-protein ligase / Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SOPEG_3685 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SOPEG_1245 sfsB; Putative regulator for maltose metabolism K07724 ner; Ner family transcriptional regulator
D SOPEG_0106 Ner-like regulatory protein K07724 ner; Ner family transcriptional regulator
D SOPEG_0228 Ner-like regulatory protein K07724 ner; Ner family transcriptional regulator
D SOPEG_2495 putative transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D SOPEG_2095 putative prophage transcriptional regulator K07724 ner; Ner family transcriptional regulator
D SOPEG_1997 putative prophage transcriptional regulator K07724 ner; Ner family transcriptional regulator
D SOPEG_2469 putative DNA-binding protein K07724 ner; Ner family transcriptional regulator
D SOPEG_1280 nadR; NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase NadR family / Ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SOPEG_3174 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D SOPEG_2692 metJ; Methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D SOPEG_2583 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SOPEG_4008 bolA; Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SOPEG_3613 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D SOPEG_1242 argR; Arginine pathway regulatory protein ArgR repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D SOPEG_0669 nagC; N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family K02565 nagC; N-acetylglucosamine repressor
D SOPEG_4102 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor
D SOPEG_1555 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SOPEG_2505 tyrR; DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D SOPEG_3739 hilA; invasion protein regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D SOPEG_3017 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D SOPEG_0538 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D SOPEG_3876 yqgE; yqgE K07735 algH; putative transcriptional regulator
D SOPEG_0953 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D SOPEG_0807 crl; DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D SOPEG_2076 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pes03021]
D SOPEG_0071 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SOPEG_3587 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOPEG_3586 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOPEG_3338 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SOPEG_1185 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SOPEG_1031 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D SOPEG_3637 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D SOPEG_0445 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SOPEG_1264 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D SOPEG_4026 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SOPEG_3592 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SOPEG_0176 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D SOPEG_0177 sspB; ClpXP protease specificity-enhancing factor / Stringent starvation protein B K03600 sspB; stringent starvation protein B
D SOPEG_3218 rseA; Sigma factor RpoE negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D SOPEG_3217 rseB; Sigma factor RpoE negative regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D SOPEG_3216 rseC; SoxR and Sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D SOPEG_0953 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D SOPEG_1254 greA2; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D SOPEG_0384 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pes03019]
D SOPEG_2138 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SOPEG_3701 rng; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D SOPEG_3138 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOPEG_1218 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOPEG_1101 orn; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SOPEG_0386 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SOPEG_0511 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SOPEG_1012 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOPEG_1269 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SOPEG_0384 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SOPEG_0909 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SOPEG_1363 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SOPEG_1086 groEL2; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_0732 groEL1; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_1209 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SOPEG_3028 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SOPEG_0951 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SOPEG_3442 nudH; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SOPEG_1061 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D SOPEG_2118 rraB; RNase E inhibitor protein K09893 rraB; regulator of ribonuclease activity B
D SOPEG_0118 yhbJ; putative ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
D SOPEG_2250 hrpA1; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pes03011]
D SOPEG_2048 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D SOPEG_3399 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D SOPEG_0090 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D SOPEG_0072 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D SOPEG_0079 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D SOPEG_1222 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D SOPEG_0238 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SOPEG_0082 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D SOPEG_0175 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D SOPEG_0097 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D SOPEG_0073 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D SOPEG_0239 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D SOPEG_0074 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D SOPEG_0083 rpsN; SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D SOPEG_1268 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D SOPEG_1071 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D SOPEG_0087 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D SOPEG_1224 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SOPEG_0092 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D SOPEG_1366 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SOPEG_1183 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D SOPEG_3590 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D SOPEG_0093 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D SOPEG_0096 rplC; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D SOPEG_0095 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D SOPEG_0084 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D SOPEG_0081 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D SOPEG_1225 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D SOPEG_3589 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SOPEG_3591 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D SOPEG_3588 rplL; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SOPEG_0174 rplM; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D SOPEG_0086 rplN; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D SOPEG_0077 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D SOPEG_0089 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D SOPEG_0070 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D SOPEG_0080 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D SOPEG_1074 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D SOPEG_2409 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D SOPEG_1248 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D SOPEG_0091 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D SOPEG_0094 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D SOPEG_0085 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D SOPEG_1249 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D SOPEG_0871 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D SOPEG_0088 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D SOPEG_0078 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D SOPEG_0926 rpmE1; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SOPEG_3986 rpmE2; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SOPEG_2142 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SOPEG_0872 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SOPEG_4123 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D SOPEG_2410 rpmI; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D SOPEG_3987 rpmJ2; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SOPEG_0075 rpmJ1; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SOPEG_2797 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D SOPEG_r3539 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOPEG_r4137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOPEG_r2709 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r4141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3606 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3543 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOPEG_r4139 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pes03009]
D SOPEG_3138 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOPEG_1101 orn; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SOPEG_3137 era; GTPase Era K03595 era; GTPase
D SOPEG_1251 obgE; GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D SOPEG_0953 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D SOPEG_1264 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D SOPEG_4026 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SOPEG_3592 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SOPEG_2795 rsuA; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SOPEG_1379 rsmA; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SOPEG_0061 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SOPEG_1297 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SOPEG_3641 rsmD; 16S rRNA m(2)G966-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SOPEG_3878 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SOPEG_0002 gidB; rRNA small subunit methyltransferase-2C glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SOPEG_2075 rsmH; rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SOPEG_0187 rsmI; rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SOPEG_1219 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SOPEG_1256 rlmE; Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SOPEG_1142 rlmH; LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SOPEG_1596 rlmI; 23S rRNA m(5)C1962 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SOPEG_4045 yhiR; Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SOPEG_1622 rlmL; 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D SOPEG_3106 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SOPEG_2529 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SOPEG_2139 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SOPEG_0752 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SOPEG_1976 yfiF; putative tRNA/rRNA methyltransferase yfiF K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SOPEG_1295 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SOPEG_2597 rimJ; ribosomal-protein-S5-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D SOPEG_2325 GCN5-related N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D SOPEG_1072 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D SOPEG_2889 prmB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D SOPEG_2138 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SOPEG_3701 rng; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D SOPEG_3875 yqgF; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SOPEG_3224 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D SOPEG_1102 rsgA; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SOPEG_3099 engA; GTP-binding protein EngA K03977 engA; GTPase
D SOPEG_0353 rimN; YrdC/Sua5 family protein required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SOPEG_1266 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SOPEG_1263 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D SOPEG_3956 ybcJ; ybcJ K14761 rlbA; ribosome-associated protein
D SOPEG_2003 ybeY; metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D SOPEG_3150 hypothetical protein K14762 yibL; ribosome-associated protein
D SOPEG_3710 yjgA; yjgA K09889 yjgA; ribosome-associated protein
D SOPEG_1617 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D SOPEG_0116 hpf; putative sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D SOPEG_0750 raiA; putative sigma-54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D SOPEG_2487 ychF; GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D SOPEG_2141 yceD; protein clustered with ribosomal protein L32p K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pes03016]
D SOPEG_1177 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SOPEG_2927 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOPEG_3372 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOPEG_1368 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOPEG_1147 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOPEG_2730 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOPEG_0673 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SOPEG_2601 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOPEG_3914 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOPEG_2610 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOPEG_1060 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOPEG_1628 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SOPEG_2412 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOPEG_2035 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOPEG_3957 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOPEG_2121 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOPEG_3102 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOPEG_2408 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOPEG_2407 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOPEG_2362 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOPEG_0268 trpS; tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SOPEG_3344 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SOPEG_2208 ycfF; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOPEG_3856 trmB; tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SOPEG_2877 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SOPEG_1267 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SOPEG_3111 iscS; Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOPEG_0353 rimN; YrdC/Sua5 family protein required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SOPEG_1208 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SOPEG_4119 mnmE; GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SOPEG_0001 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SOPEG_1230 cysQ; adenosine-3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SOPEG_4122 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SOPEG_2369 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D SOPEG_3310 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SOPEG_2547 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D SOPEG_4097 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SOPEG_4098 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SOPEG_0952 yadB; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SOPEG_3125 tadA; tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SOPEG_1313 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D SOPEG_3686 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SOPEG_2005 miaB; tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SOPEG_2605 cmoB; tRNA (5-methoxyuridine) 34 synthase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D SOPEG_2706 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D SOPEG_1073 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SOPEG_1976 yfiF; putative tRNA/rRNA methyltransferase yfiF K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SOPEG_0899 trmL; tRNA (cytosine34-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SOPEG_3223 yfiC; putative O-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D SOPEG_3405 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D SOPEG_2314 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SOPEG_2450 ttcA2; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D SOPEG_3645 tusA; tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SOPEG_0240 tusB; tRNA 5-methylaminomethyl-2-thiouridine synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SOPEG_0241 tusC; tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SOPEG_0242 tusD; tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SOPEG_1594 tusE; tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SOPEG_3906 ygfZ; Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D SOPEG_1013 ygcF; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SOPEG_0816 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SOPEG_4019 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SOPEG_3380 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SOPEG_1666 yeaZ; yeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SOPEG_1182 gcp; YgjD/Kae1/Qri7 family required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SOPEG_1205 yjeE; ATPase YjeE predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SOPEG_1218 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOPEG_1269 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pes03012]
D SOPEG_1265 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SOPEG_2411 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SOPEG_3398 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SOPEG_3594 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D SOPEG_0236 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SOPEG_0237 fusA; elongation factor G K02355 fusA; elongation factor G
D SOPEG_2480 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SOPEG_3396 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SOPEG_2479 prmC; Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SOPEG_2486 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SOPEG_2026 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SOPEG_1089 efp2; Translation elongation factor P K02356 efp; elongation factor P
D SOPEG_0735 efp1; Translation elongation factor P K02356 efp; elongation factor P
D SOPEG_1105 yjeA; Lysyl-tRNA synthetase-related protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D SOPEG_0734 yjeK1; Lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D SOPEG_1088 yjeK2; lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D SOPEG_1294 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D SOPEG_0064 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:pes03110]
D SOPEG_2024 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D SOPEG_0754 clpB; protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SOPEG_4005 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SOPEG_0921 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SOPEG_3976 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D SOPEG_1363 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SOPEG_1086 groEL2; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_0732 groEL1; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_1364 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SOPEG_1383 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D SOPEG_0285 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D SOPEG_3227 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SOPEG_4091 ibpA; 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D SOPEG_4092 ibpB; 16 kDa heat shock protein B K04081 ibpB; molecular chaperone IbpB
D SOPEG_0284 hslR; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4-like protein) K04762 hslR; ribosome-associated heat shock protein Hsp15
D SOPEG_1085 groES2; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SOPEG_0731 groES1; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SOPEG_0995 degP; HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SOPEG_1257 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SOPEG_0004 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOPEG_0896 secB; Protein export cytoplasm chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D SOPEG_2268 spy; periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D SOPEG_0902 cpxP; P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein K06006 cpxP; periplasmic protein CpxP/Spy
D SOPEG_3958 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SOPEG_4002 ppiD; Peptidyl-prolyl cis-trans isomerase ppiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SOPEG_0244 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SOPEG_1229 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase fklB K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D SOPEG_0246 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D SOPEG_1381 surA; peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SOPEG_0385 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D SOPEG_3968 ybbN; thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin
D SOPEG_2595 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D SOPEG_0895 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D SOPEG_2370 grxD; putative monothiol glutaredoxin GrlA K07390 grxD; monothiol glutaredoxin
D SOPEG_3359 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SOPEG_1653 dsbB; Periplasmic thiol:disulfide oxidoreductase DsbB required for DsbA reoxidation K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D SOPEG_3911 dsbC; Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SOPEG_0726 dipZ1; Cytochrome c-type biogenesis protein DsbD protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D SOPEG_1080 dipZ2; Cytochrome c-type biogenesis protein DsbD / protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D SOPEG_2900 ccmG; Cytochrome c-type biogenesis protein CcmG/DsbE thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pes04131]
D SOPEG_3107 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SOPEG_1465 gapA; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOPEG_0483 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOPEG_2377 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_2574 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_3976 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pes03051]
D SOPEG_3976 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pes03032]
D SOPEG_0764 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOPEG_3547 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D SOPEG_4003 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta
D SOPEG_2406 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SOPEG_2049 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SOPEG_4124 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOPEG_1319 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SOPEG_1184 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SOPEG_1325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOPEG_3384 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOPEG_4125 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOPEG_2122 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOPEG_1145 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOPEG_2152 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOPEG_0765 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOPEG_3979 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOPEG_1296 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SOPEG_1802 holE; DNA polymerase III theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SOPEG_3385 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SOPEG_3358 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOPEG_2942 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOPEG_2340 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D SOPEG_3559 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3575 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3177 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1961 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0657 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0271 dam; Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1153 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0679 seqA; SeqA protein negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D SOPEG_3020 hda; DNA replication initiation factor K10763 hda; DnaA-homolog protein
D SOPEG_2812 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SOPEG_4127 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SOPEG_0654 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOPEG_1161 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOPEG_2534 topA; DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pes03036]
D SOPEG_3138 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOPEG_1447 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D SOPEG_3547 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D SOPEG_4003 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta
D SOPEG_2406 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SOPEG_2049 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SOPEG_4124 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOPEG_0185 diaA; DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein
D SOPEG_1597 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D SOPEG_0546 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D SOPEG_3685 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SOPEG_1209 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SOPEG_2031 lrp; Leucine-responsive regulatory protein regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOPEG_2658 mukB; Chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D SOPEG_2659 mukE; Chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D SOPEG_2660 mukF; Chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D SOPEG_2064 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SOPEG_1024 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D SOPEG_3639 ftsE; Cell division transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SOPEG_2073 ftsI; essential cell division protein FtsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SOPEG_2032 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SOPEG_2074 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SOPEG_0923 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D SOPEG_2065 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D SOPEG_2068 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SOPEG_3638 ftsX; cell division ABC transporter subunit FtsX K09811 ftsX; cell division transport system permease protein
D SOPEG_2063 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOPEG_2943 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D SOPEG_3896 zapA; cell division factor ZapA, localizes to the cytokinetic ring K09888 zapA; cell division protein ZapA
D SOPEG_0918 zapB; Putative cytoplasmic protein K09892 zapB; cell division protein ZapB
D SOPEG_1624 zapC; zapC K18657 zapC; cell division protein ZapC
D SOPEG_2053 yacF; yacF K18778 zapD; cell division protein ZapD
D SOPEG_0173 yhcM; ATPase AFG1 family K06916 zapE; cell division protein ZapE
D SOPEG_1228 ytfB; Putative cell envelope opacity-associated protein A K07269 ytfB; cell division protein YtfB
D SOPEG_1206 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_3430 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOPEG_3984 acrA; acriflavin efflux protein AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D SOPEG_1661 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SOPEG_1662 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SOPEG_1663 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SOPEG_0867 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D SOPEG_0679 seqA; SeqA protein negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D SOPEG_3697 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SOPEG_3698 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SOPEG_3699 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SOPEG_1140 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D SOPEG_1759 ParA-like protein K03496 parA; chromosome partitioning protein
D SOPEG_3523 parA; putative plasmid partition protein A K03496 parA; chromosome partitioning protein
D SOPEG_0654 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOPEG_1161 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOPEG_0001 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SOPEG_0002 gidB; rRNA small subunit methyltransferase-2C glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SOPEG_0328 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D SOPEG_3910 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D SOPEG_2729 mrp; Scaffold protein for [4Fe-4S] cluster assembly ApbC MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SOPEG_3357 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pes03400]
D SOPEG_0682 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SOPEG_3226 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SOPEG_3855 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SOPEG_2359 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SOPEG_2058 mutT; nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SOPEG_0903 Nudix hydrolase family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SOPEG_0868 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SOPEG_1919 alkA; DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOPEG_0873 mutM; formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SOPEG_2129 nei; endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SOPEG_1456 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SOPEG_2765 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SOPEG_3549 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D SOPEG_3912 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOPEG_2942 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOPEG_3358 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOPEG_1324 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SOPEG_0502 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SOPEG_1830 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SOPEG_0325 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOPEG_3587 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOPEG_3586 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOPEG_0071 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SOPEG_3338 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SOPEG_2303 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SOPEG_1032 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SOPEG_1207 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D SOPEG_3445 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D SOPEG_1930 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SOPEG_3082 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SOPEG_4020 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SOPEG_3384 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOPEG_4125 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOPEG_2122 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOPEG_1145 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOPEG_2152 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOPEG_0765 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOPEG_3979 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOPEG_1296 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SOPEG_1802 holE; DNA polymerase III theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SOPEG_1325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOPEG_3559 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3575 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3177 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1961 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0657 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0271 dam; Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1153 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3433 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SOPEG_3435 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SOPEG_3432 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SOPEG_1058 recA; recombinase A K03553 recA; recombination protein RecA
D SOPEG_2613 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SOPEG_1038 rusA; crossover junction endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D SOPEG_0925 priA; primosomal protein N' factor K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SOPEG_1223 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D SOPEG_3981 priC; primosomal replication protein N K04067 priC; primosomal replication protein N''
D SOPEG_3194 sbcD2; ATP-dependent dsDNA exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D SOPEG_3977 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SOPEG_3231 recN; recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D SOPEG_0824 rdgC1; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D SOPEG_2812 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SOPEG_4127 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SOPEG_2534 topA; DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SOPEG_3547 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha
D SOPEG_4003 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta
D SOPEG_3685 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SOPEG_2406 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SOPEG_2049 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SOPEG_1447 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS
D SOPEG_0811 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SOPEG_3141 Hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SOPEG_3653 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SOPEG_0388 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D SOPEG_1602 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D SOPEG_0537 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SOPEG_2810 nrdA; Ribonucleotide reductase of class Ia (aerobic) alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOPEG_2809 nrdB; Ribonucleotide reductase of class Ia (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOPEG_1985 nrdF; Ribonucleotide reductase of class Ib (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pes03029]
D SOPEG_1265 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SOPEG_2411 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SOPEG_3398 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SOPEG_3594 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D SOPEG_0236 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SOPEG_0237 fusA; elongation factor G K02355 fusA; elongation factor G
D SOPEG_3137 era; GTPase Era K03595 era; GTPase
D SOPEG_2362 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOPEG_1147 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOPEG_2610 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOPEG_2601 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOPEG_1325 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOPEG_3391 bamA; outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D SOPEG_1363 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SOPEG_3227 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SOPEG_1086 groEL2; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_0732 groEL1; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_1085 groES2; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SOPEG_0731 groES1; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SOPEG_1364 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SOPEG_3111 iscS; Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOPEG_2370 grxD; putative monothiol glutaredoxin GrlA K07390 grxD; monothiol glutaredoxin
D SOPEG_2729 mrp; Scaffold protein for [4Fe-4S] cluster assembly ApbC MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SOPEG_4014 cyoE; Heme O synthase protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SOPEG_4120 yidC; Inner membrane protein translocase component YidC long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOPEG_3976 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pes02000]
D SOPEG_2666 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SOPEG_3998 mdlA; putative multidrug transporter membrane\ATP-binding components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOPEG_3997 mdlB; putative multidrug transporter membrane\ATP-binding components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SOPEG_2028 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SOPEG_2029 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SOPEG_1621 uup; ABC transporter ATPase component K15738 uup; ABC transport system ATP-binding/permease protein
D SOPEG_0910 sbp; Sulfate-binding protein Sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SOPEG_2984 cysU; sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D SOPEG_2983 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D SOPEG_2982 cysA; Sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SOPEG_0487 modF; putative molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D SOPEG_0570 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D SOPEG_0573 potI; putrescine transporter subunit: membrane component of ABC superfamily K11074 potI; putrescine transport system permease protein
D SOPEG_0572 potH; putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein
D SOPEG_0571 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SOPEG_3670 extracellular solute-binding protein family 1 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SOPEG_3472 spermidine/putrescine ABC transporter periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SOPEG_3470 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SOPEG_3668 binding-protein-dependent transport systems inner membrane component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SOPEG_3666 ABC transporter-related protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SOPEG_1980 proX1; glycine betaine / proline ABC transporter - periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SOPEG_1982 proW; glycine betaine / proline ABC transporter - membrane subunit K02001 proW; glycine betaine/proline transport system permease protein
D SOPEG_1558 Hydroxymethylpyrimidine ABC transporter substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D SOPEG_1557 Hydroxymethylpyrimidine ABC transporter transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D SOPEG_1556 Hydroxymethylpyrimidine ABC transporter ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D SOPEG_2348 araF; L-arabinose-binding periplasmic protein precursor AraF K10537 araF; L-arabinose transport system substrate-binding protein
D SOPEG_4076 ytfT; putative ABC transporter permease protein K23509 ytfT; galactofuranose transport system permease protein
D SOPEG_1490 Glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SOPEG_1487 N-Acetyl-D-glucosamine ABC transport system permease protein 2 K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SOPEG_1489 putative sugar ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D SOPEG_2937 med; Basic membrane protein B precursor K07335 bmpA; basic membrane protein A and related proteins
D SOPEG_2939 yufP; ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D SOPEG_2940 yufQ; ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D SOPEG_0165 mlaD; putative ABC transporter periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOPEG_0164 mlaE; putative ABC transporter permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOPEG_0163 mlaF; putative ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SOPEG_0166 mlaC; putative ABC transporter auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D SOPEG_0167 mlaB; Uncharacterized protein YrbB K07122 mlaB; phospholipid transport system transporter-binding protein
D SOPEG_3844 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SOPEG_3842 putative permease component of ABC transporter K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SOPEG_3922 rbsD; Ribose ABC transport system high affinity permease RbsD K02057 ABC.SS.P; simple sugar transport system permease protein
D SOPEG_3025 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SOPEG_2861 hisP; Histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_2015 artI; Arginine ABC transporter periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D SOPEG_2016 artP; Arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_1152 gltI; Glutamate Aspartate periplasmic binding protein precursor GltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SOPEG_1150 gltK; Glutamate Aspartate transport system permease protein GltK K10002 gltK; glutamate/aspartate transport system permease protein
D SOPEG_1151 gltJ; Glutamate Aspartate transport system permease protein GltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D SOPEG_1149 gltL; Glutamate Aspartate transport ATP-binding protein GltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_3918 extracellular solute-binding protein family 3 K10018 occT; octopine/nopaline transport system substrate-binding protein
D SOPEG_3429 Amino acid ABC transporter periplasmic amino acid-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D SOPEG_3916 polar amino acid ABC transporter, inner membrane subunit K10020 occQ; octopine/nopaline transport system permease protein
D SOPEG_3529 Amino acid ABC transporter periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D SOPEG_3535 yhdX; amino-acid transporter subunit ; membrane component of ABC superfamily protein K09970 aapQ; general L-amino acid transport system permease protein
D SOPEG_3537 yhdZ; ABC-type polar amino acid transport system ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SOPEG_1055 Cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D SOPEG_0631 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D SOPEG_3369 metQ; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SOPEG_3368 metI; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SOPEG_3367 metN; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SOPEG_0514 glnH; ABC-type amino acid transport/signal transduction systems periplasmic component/domain protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SOPEG_0516 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D SOPEG_0517 glnP; Glutamate transport membrane-spanning protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SOPEG_0449 dppD; Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D SOPEG_2555 sapB; antimicrobial peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein
D SOPEG_2554 sapC; antimicrobial peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein
D SOPEG_2552 sapF; antimicrobial peptide ABC system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D SOPEG_0555 gsiC; glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein
D SOPEG_3307 oligopeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SOPEG_2777 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D SOPEG_2779 yejF; microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein
D SOPEG_0983 fhuC; Ferric hydroxamate ABC transporter ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D SOPEG_1518 hmuT; hemin ABC transporter periplasmic component K25132 hmuT; heme transport system substrate-binding protein
D SOPEG_1519 hmuU; hemin ABC transporter permease component K25133 hmuU; heme transport system permease protein
D SOPEG_1568 ABC transporter (iron.B12.siderophore.hemin) permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D SOPEG_1566 putative iron(III) ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SOPEG_2618 znuA; Zinc ABC transporter periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D SOPEG_2616 znuB; Zinc ABC transporter inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D SOPEG_2617 znuC; Zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SOPEG_2333 chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D SOPEG_1780 sitD; Manganese ABC transporter inner membrane permease protein SitD K11606 sitD; manganese/iron transport system permease protein
D SOPEG_1954 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D SOPEG_1955 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D SOPEG_2124 lptF; lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D SOPEG_0114 lptB; Lipopolysaccharide ABC transporter ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SOPEG_2304 lolC; Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D SOPEG_2306 lolE; Lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D SOPEG_2305 lolD; Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SOPEG_2903 ccmD; Cytochrome c-type biogenesis protein CcmD interacts with CcmCE K02196 ccmD; heme exporter protein D
D SOPEG_2904 ccmC; Cytochrome c-type biogenesis protein CcmC putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D SOPEG_2906 ccmA; ABC transporter involved in cytochrome c biogenesis ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SOPEG_3638 ftsX; cell division ABC transporter subunit FtsX K09811 ftsX; cell division transport system permease protein
D SOPEG_3639 ftsE; Cell division transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SOPEG_2387 sufC; Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SOPEG_1916 lacY1; lactose transport protein LacY K02532 lacY; MFS transporter, OHS family, lactose permease
D SOPEG_3347 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D SOPEG_2769 sotA; Sugar efflux transporter B K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D SOPEG_1500 gudP2; putative D-glucarate transporter, membrane protein K03535 gudP; MFS transporter, ACS family, glucarate transporter
D SOPEG_0225 exuT1; Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D SOPEG_1003 garP; D-galactarate permease K12299 garP; MFS transporter, ACS family, probable galactarate transporter
D SOPEG_1807 yeaN; major facilitator transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D SOPEG_3449 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D SOPEG_0914 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D SOPEG_1423 mdtG; Multidrug-efflux transporter major facilitator superfamily (MFS) K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SOPEG_3083 major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SOPEG_2596 mdtH; MFS superfamily export protein YceL K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D SOPEG_3461 ydhP; Putative sugar transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SOPEG_0525 emrB; Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SOPEG_2036 putative MFS family transporter protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D SOPEG_0263 tsgA; putative transporter K06141 tsgA; MFS transporter, TsgA protein
D SOPEG_2974 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SOPEG_3441 ptsP; Phosphocarrier protein kinase/phosphorylase2C nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SOPEG_2973 ptsH; PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr K02784 ptsH; phosphocarrier protein HPr
D SOPEG_0119 npr; Phosphocarrier protein nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D SOPEG_2768 fruB; Fructose-specific phosphocarrier protein HPr / PTS system fructose-specific IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SOPEG_2975 crr; PTS system glucose-specific transporter subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SOPEG_2154 ptsG; PTS system glucose-specific transporter subunits IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SOPEG_0672 nagE; PTS system N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SOPEG_3068 putative PTS system galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SOPEG_3066 putative PTS system galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SOPEG_0117 ptsN; PTS system nitrogen-specific IIA component PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SOPEG_2819 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOPEG_0176 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D SOPEG_1593 yccA; Putative TEGT family carrier/transport protein K19416 yccA; modulator of FtsH protease
D SOPEG_1104 yjeP; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K22051 mscM; miniconductance mechanosensitive channel
D SOPEG_0435 motB1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_3777 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_0648 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D SOPEG_0647 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D SOPEG_0701 tolQ; MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D SOPEG_0702 tolR; Tol biopolymer transport system TolR protein K03560 tolR; biopolymer transport protein TolR
D SOPEG_0324 corA; magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter
D SOPEG_2451 zntB; zinc transporter K16074 zntB; zinc transporter
D SOPEG_1133 crcB; chromosome condensation membrane protein K06199 crcB; fluoride exporter
D SOPEG_2818 ompC; Outer membrane protein C precursor K09475 ompC; outer membrane pore protein C
D SOPEG_0547 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D SOPEG_2459 phage outer membrane protein K16078 ail; attachment invasion locus protein
D SOPEG_0857 tsx; nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein
D SOPEG_2758 TonB-dependent recepto K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_2277 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SOPEG_3391 bamA; outer membrane protein assembly factor YaeT K07277 SAM50; outer membrane protein insertion porin family
D SOPEG_3100 bamB; outer membrane biogenesis protein BamB K17713 bamB; outer membrane protein assembly factor BamB
D SOPEG_3015 bamC; putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D SOPEG_0751 bamD; outer membrane biogenesis protein BamD K05807 bamD; outer membrane protein assembly factor BamD
D SOPEG_3247 bamE; outer membrane biogenesis protein BamE K06186 bamE; outer membrane protein assembly factor BamE
D SOPEG_1235 ytfM; Uncharacterized protein YtfM precursor K07278 tamA; translocation and assembly module TamA
D SOPEG_1236 ytfN; Uncharacterized protein YtfN K09800 tamB; translocation and assembly module TamB
D SOPEG_0113 lptA; LptA protein essential for LPS transport across the periplasm K09774 lptA; lipopolysaccharide export system protein LptA
D SOPEG_0112 lptC; Uncharacterized protein YrbK K11719 lptC; lipopolysaccharide export system protein LptC
D SOPEG_1382 lptD; Outer membrane protein required for envelope biogenesis / Organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D SOPEG_1146 lptE; LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) K03643 lptE; LPS-assembly lipoprotein
D SOPEG_1746 sseB; Type III secretion effector SseB K15344 sseB; secreted effector protein SseB
D SOPEG_1744 sseC; Type III secretion system effector SseC K15345 sseC; secreted effector protein SseC
D SOPEG_1743 sseD; Type III secretion system effector SseD K15346 sseD; secreted effector protein SseD
D SOPEG_2002 ybeX; magnesium/cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D SOPEG_1340 effector of murein hydrolase K06518 cidA; holin-like protein
D SOPEG_2673 aroP; Aromatic amino acid transport protein AroP K11734 aroP; aromatic amino acid transport protein AroP
D SOPEG_3504 gabP; gamma-aminobutyrate transport protein K11735 gabP; GABA permease
D SOPEG_3985 acrB2; RND efflux system inner membrane transporter component AcrB K18138 acrB; multidrug efflux pump
D SOPEG_0855 qacE; Ethidium bromide-methyl viologen resistance protein EmrE K03297 emrE; small multidrug resistance pump
D SOPEG_2919 sugE; GroEL supressor protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D SOPEG_0519 Permease of the drug/metabolite transporter (DMT) superfamily K15269 pecM; probable blue pigment (indigoidine) exporter
D SOPEG_3868 rhaT; L-rhamnose-proton symporter K02856 rhaT; L-rhamnose-H+ transport protein
D SOPEG_0322 rarD; chloramphenicol-sensitive protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D SOPEG_3212 arnE; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D SOPEG_0313 gntU; high-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D SOPEG_2546 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D SOPEG_1537 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D SOPEG_0162 yrbG; inner membrane protein YrbG predicted calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D SOPEG_4033 pitA; low-affinity inorganic phosphate transport protein K16322 pit; low-affinity inorganic phosphate transporter
D SOPEG_3688 panF; sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter
D SOPEG_1345 gltP; Proton/glutamate symport protein / Proton/aspartate symport protein K11102 gltP; proton glutamate symport protein
D SOPEG_1365 nhaA; sodium-hydrogen antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D SOPEG_1338 yjcE; Putative Na(+)/H(+) exchanger protein CPA1 family precursor K24163 nhaK; monovalent cation/hydrogen antiporter
D SOPEG_1200 Sodium/hydrogen exchanger K24160 NHA1; sodium/hydrogen antiporter
D SOPEG_1471 cvrA; Cell volume regulation protein A K11105 cvrA; potassium/hydrogen antiporter
D SOPEG_3973 ybaL; putative cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter
D SOPEG_3608 trkH; Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D SOPEG_4044 codB3; Cytosine/purine/uracil/thiamine/allantoin permease family protein K10974 codB; cytosine permease
D SOPEG_1941 codB2; Cytosine/purine/uracil/thiamine/allantoin permease family protein K10974 codB; cytosine permease
D SOPEG_3021 uraA; uracil transporter K02824 uraA; uracil permease
D SOPEG_3341 xanP; Xanthine permease K16345 xanP; xanthine permease XanP
D SOPEG_1918 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SOPEG_2925 nupC; nucleoside transport protein NupC K11535 nupC; nucleoside transport protein
D SOPEG_2924 mntH; manganese transport protein MntH K03322 mntH; manganese transport protein
D SOPEG_0375 wzxE; O-antigen translocase K16693 wzxE; enterobacterial common antigen flippase
D SOPEG_2600 murJ; putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOPEG_4143 kup; Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein
D SOPEG_3707 aaeB; p-hydroxybenzoic acid efflux subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D SOPEG_4043 marC; Multiple antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D SOPEG_2068 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SOPEG_2793 Ferrous iron transport permease EfeU K07243 FTR; high-affinity iron transporter
D SOPEG_0705 pal; peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D SOPEG_0703 tolA; cell envelope integrity inner membrane protein TolA K03646 tolA; colicin import membrane protein
D SOPEG_0704 tolB; tolB protein precursor periplasmic protein involved in the tonb-independent uptake of group A colicins K03641 tolB; TolB protein
D SOPEG_2933 emrA; Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D SOPEG_2089 Cobalt/zinc/cadmium efflux RND transporter membrane fusion protein CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D SOPEG_1563 colicin V secretion protein K13408 cvaA; membrane fusion protein
D SOPEG_3984 acrA; acriflavin efflux protein AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D SOPEG_0489 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D SOPEG_3706 aaeA; p-hydroxybenzoic acid efflux subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D SOPEG_0291 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D SOPEG_0292 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D SOPEG_0293 feoC; Ferrous iron-sensisng transcriptional regulator FeoC K07490 feoC; ferrous iron transport protein C
D SOPEG_4034 uspB; universal stress protein UspB K06144 uspB; universal stress protein B
D SOPEG_1107 ecnB; entericidin B K16348 ecnB; entericidin B
D SOPEG_1799 yebZ; Copper resistance protein D K07245 pcoD; copper resistance protein D
D SOPEG_1800 yobA; putative copper resistance protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:pes02044]
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_1563 colicin V secretion protein K13408 cvaA; membrane fusion protein
D SOPEG_3105 pilF; Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D SOPEG_3866 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D SOPEG_2687 ppdD; putative prelipin peptidase dependent protein K02682 ppdD; prepilin peptidase dependent protein D
D SOPEG_3863 yggT; Integral membrane protein YggT involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D SOPEG_1750 ssaC; Type III secretion system apparatus SsaC K03219 yscC; type III secretion protein C
D SOPEG_1749 ssaD; type III secretion system apparatus SsaD K03220 yscD; type III secretion protein D
D SOPEG_1740 ssaG; type III secretion system needle protein SsaG K03221 yscF; type III secretion protein F
D SOPEG_1737 ssaJ; type III secretion system lipoprotein SsaJ K03222 yscJ; type III secretion protein J
D SOPEG_1731 ssaN; Type III secretion cytoplasmic ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D SOPEG_3747 spaO; type III secretion apparatus SpaO K03225 yscQ; type III secretion protein Q
D SOPEG_1728 ssaQ; Type III secretion inner membrane protein K03225 yscQ; type III secretion protein Q
D SOPEG_1727 ssaR; Type III secretion inner membrane protein K03226 yscR; type III secretion protein R
D SOPEG_1726 ssaS; Type III secretion inner membrane protein K03227 yscS; type III secretion protein S
D SOPEG_1724 ssaU; Type III secretion inner membrane protein K03229 yscU; type III secretion protein U
D SOPEG_1732 ssaV; Type III secretion inner membrane channel protein K03230 yscV; type III secretion protein V
D SOPEG_3742 invA; type III secretion system protein InvA K03230 yscV; type III secretion protein V
D SOPEG_3744 invC; Type III secretion cytoplasmic ATP synthase K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D SOPEG_3749 spaQ; type III secretion apparatus SpaQ K22508 spaQ; type III secretion system export apparatus protein
D SOPEG_3750 spaR; type III secretion apparatus SpaR K22509 spaR; type III secretion system export apparatus protein
D SOPEG_3743 invB; type III secretion system chaperone SpaK K22512 spaK; type III secretion system chaperone
D SOPEG_3745 spaM; type III secretion apparatus SpaM K22513 spaM; type III secretion system protein
D SOPEG_0433 flhA1; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOPEG_0406 fliF1; flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D SOPEG_0408 fliH1; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOPEG_0409 fliI1; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOPEG_0414 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_3809 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_0415 fliO1; flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOPEG_0416 fliP1; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOPEG_0418 fliR1; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOPEG_3911 dsbC; Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SOPEG_2059 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOPEG_0896 secB; Protein export cytoplasm chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D SOPEG_3593 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOPEG_3196 secF1; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOPEG_1260 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOPEG_0076 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SOPEG_1070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOPEG_3640 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SOPEG_3198 yajC1; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_3287 yajC2; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOPEG_4120 yidC; Inner membrane protein translocase component YidC long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOPEG_3616 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D SOPEG_3615 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SOPEG_3614 tatC; twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SOPEG_1134 tatE; twin-arginine translocation protein, TatA/E family subunit K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:pes02042]
D SOPEG_3905 yqfA; putative membrane protein hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pes02022]
D SOPEG_0833 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOPEG_2310 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SOPEG_2311 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SOPEG_0287 envZ; Osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SOPEG_0288 ompR; Two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SOPEG_2437 rstA2; DNA-binding transcriptional regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D SOPEG_0900 cpxA; Copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SOPEG_0901 cpxR; Copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SOPEG_3046 baeR; Response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SOPEG_1517 czcS; Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOPEG_0181 arcB; Aerobic respiration control sensor protein arcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SOPEG_1354 arcA; Aerobic respiration control protein arcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D SOPEG_2979 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D SOPEG_2814 rcsB; DNA-binding capsular synthesis response regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SOPEG_1007 barA; BarA sensory histidine kinase (VarS GacS) K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SOPEG_1831 uvrY; BarA-associated response regulator UvrY ( GacA SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SOPEG_3353 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SOPEG_3120 glrR; DNA-binding transcriptional activator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SOPEG_3778 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOPEG_3785 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOPEG_1752 ssrA; Secretion system regulator: Sensor component K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D SOPEG_1753 ssrB; Secretion system regulator of DegU/UvrY/BvgA type K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
C 02035 Bacterial motility proteins [BR:pes02035]
D SOPEG_3778 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOPEG_3779 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D SOPEG_3785 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOPEG_0408 fliH1; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOPEG_0409 fliI1; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOPEG_0415 fliO1; flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOPEG_0416 fliP1; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOPEG_0418 fliR1; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOPEG_0433 flhA1; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOPEG_0407 fliG1; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOPEG_0413 fliM1; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOPEG_3810 fliM2; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOPEG_0414 fliN1; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_3809 fliN2; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOPEG_0406 fliF1; flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D SOPEG_0422 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D SOPEG_3792 flgA2; flagellar biosynthesis; assembly of basal-body periplasmic P ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SOPEG_0412 fliL1; Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D SOPEG_3811 fliL2; flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D SOPEG_0411 fliK1; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SOPEG_3793 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOPEG_3794 flgC2; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOPEG_0427 flgD1; flagellar biosynthesis, initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOPEG_3795 flgD2; flagellar biosynthesis, initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOPEG_0425 flgF1; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOPEG_0424 flgG1; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOPEG_0426 flgE1; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SOPEG_0420 flgK1; flagellar biosynthesis, hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1
D SOPEG_3801 flgK2; flagellar biosynthesis, hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1
D SOPEG_0419 flgL1; flagellar biosynthesis; hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOPEG_3802 flgL2; flagellar biosynthesis; hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOPEG_0432 flgN1; flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D SOPEG_3773 flhD2; Flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOPEG_0438 flhC1; Flagellar transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOPEG_0445 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SOPEG_0435 motB1; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_3777 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SOPEG_1055 Cystine-binding periplasmic protein precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D SOPEG_0431 flgM1; anti-sigma factor for FliA (sigma 28) K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOPEG_3791 flgM2; anti-sigma factor for FliA (sigma 28) K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOPEG_3866 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D SOPEG_3105 pilF; Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pes04812]
D SOPEG_3697 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SOPEG_2063 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOPEG_2064 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SOPEG_1661 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SOPEG_1662 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SOPEG_1663 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SOPEG_1759 ParA-like protein K03496 parA; chromosome partitioning protein
D SOPEG_3523 parA; putative plasmid partition protein A K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:pes04147]
D SOPEG_3976 htpG; molecular chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D SOPEG_1012 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOPEG_1465 gapA; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOPEG_3887 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOPEG_2377 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_2574 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOPEG_0838 ahpC; Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D SOPEG_1086 groEL2; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_0732 groEL1; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOPEG_1363 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SOPEG_3663 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOPEG_3081 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SOPEG_3594 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D SOPEG_0236 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SOPEG_2208 ycfF; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOPEG_3975 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOPEG_3980 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SOPEG_2700 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOPEG_2329 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOPEG_0484 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SOPEG_3351 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOPEG_1510 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SOPEG_3894 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOPEG_2669 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOPEG_3505 gdhA; NAD-specific glutamate dehydrogenase / NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOPEG_2572 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SOPEG_0911 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOPEG_0483 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pes02048]
D SOPEG_3559 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3575 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_3177 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1961 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0657 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_0271 dam; Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1153 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOPEG_1839 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D SOPEG_0140 mok1; regulatory peptide whose translation enables hok expression K18920 hokA; protein HokA
D SOPEG_2299 hok2; small toxic membrane protein HokA K18920 hokA; protein HokA
D SOPEG_3233 mok3; regulatory peptide whose translation enables hok expression K18919 hokC_D; protein HokC/D
D SOPEG_3232 hok3; small toxic membrane protein HokA K18919 hokC_D; protein HokC/D
D SOPEG_2297 sok2; sok_RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D SOPEG_3234 sok3; sok_RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D SOPEG_0139 sok1; sok_RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D SOPEG_3276 hicB; antitoxin of the hicA hicB toxin-antitoxin system K18843 hicB; antitoxin HicB
D SOPEG_3989 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D SOPEG_3988 tomB; Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB
D SOPEG_2116 hypothetical protein K19334 tabA; biofilm protein TabA
D SOPEG_1907 hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D SOPEG_3733 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D SOPEG_2063 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOPEG_3697 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SOPEG_0654 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOPEG_1161 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOPEG_2927 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOPEG_3907 ygfY; ygfY K09159 cptB; antitoxin CptB
D SOPEG_3111 iscS; Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pes04090]
C 01504 Antimicrobial resistance genes [BR:pes01504]
D SOPEG_1517 czcS; Sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOPEG_2310 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SOPEG_2311 phoP; DNA-binding transcriptional regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SOPEG_3984 acrA; acriflavin efflux protein AcrA K03585 acrA; membrane fusion protein, multidrug efflux system
D SOPEG_3985 acrB2; RND efflux system inner membrane transporter component AcrB K18138 acrB; multidrug efflux pump
D SOPEG_2277 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SOPEG_1166 tolC; Type I secretion outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D SOPEG_2633 AraC-family transcriptional regulatory protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pes03100]
D SOPEG_t2926 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOPEG_t3541 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOPEG_t3604 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOPEG_t1063 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t3954 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t0372 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t2908 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOPEG_t1538 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SOPEG_t1900 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SOPEG_t4136 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SOPEG_t0766 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SOPEG_t1826 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SOPEG_t0662 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SOPEG_t0665 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SOPEG_t4140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SOPEG_t3596 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOPEG_t1100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOPEG_t1201 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOPEG_t0371 tRNA-His K14226 tRNA-His; tRNA His
D SOPEG_t3542 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOPEG_t3605 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOPEG_t0666 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t2128 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t0370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t1298 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t1261 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t1825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOPEG_t0707 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SOPEG_t2929 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SOPEG_t1262 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t0663 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t0667 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t1187 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t3425 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOPEG_t0724 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SOPEG_t1078 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SOPEG_t0441 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOPEG_t2804 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOPEG_t0369 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOPEG_t1592 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t1897 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t2585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t1062 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOPEG_t3595 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOPEG_t3598 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOPEG_t0795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOPEG_t4135 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SOPEG_t3597 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SOPEG_t1455 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SOPEG_t2376 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOPEG_t2928 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOPEG_r2709 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r4141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3606 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3543 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOPEG_r3540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOPEG_r4139 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOPEG_r3539 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOPEG_r4137 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOPEG_2297 sok2; sok_RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D SOPEG_3234 sok3; sok_RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
D SOPEG_0139 sok1; sok_RNA K18871 sokC; sRNA antisense regulator of MokC and HokC protein
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SOPEG_0560 yliI; Soluble aldose sugar dehydrogenase PQQ-dependent K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D SOPEG_1318 qor2; quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOPEG_3463 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOPEG_1234 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SOPEG_1464 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SOPEG_0190 yqjG; Glutathione S-transferase omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D SOPEG_3018 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SOPEG_2504 tpx; Thiol peroxidase Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SOPEG_0913 fpr; Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SOPEG_3771 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SOPEG_1905 pqqE; Coenzyme PQQ synthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D SOPEG_2038 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SOPEG_1029 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SOPEG_0852 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SOPEG_2001 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D SOPEG_1304 yhbS; Acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SOPEG_2936 yjaB; Histone acetyltransferase HPA2-related acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D SOPEG_2537 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D SOPEG_2027 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SOPEG_1974 yfiP; DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D SOPEG_3440 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SOPEG_2637 apbE; thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SOPEG_2395 ppsR; PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SOPEG_2527 yciV; yciV K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D SOPEG_2895 sixA; Phosphohistidine phosphatase sixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D SOPEG_4057 yhjK; putative phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SOPEG_3879 endA; DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D SOPEG_2153 ycfH; Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SOPEG_0060 Phage endolysin K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SOPEG_0357 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SOPEG_2113 yjgF; yjgF K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SOPEG_1204 yjeF; putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SOPEG_1240 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D SOPEG_2356 rsxD; Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D SOPEG_2354 rsxB; Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
D SOPEG_0954 sfsA; Sugar/maltose fermentation stimulation protein-like protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D SOPEG_2808 yfaE; 2Fe-2S ferredoxin YfaE K11107 yfaE; ferredoxin
D SOPEG_2357 rsxG; Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D SOPEG_2358 rsxE; Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D SOPEG_2353 rsxA; Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D SOPEG_4147 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D SOPEG_3909 fldB; flavodoxin FldB K03840 fldB; flavodoxin II
D SOPEG_3712 cybC; soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D SOPEG_0676 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D SOPEG_1987 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D SOPEG_2945 cysZ; putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D SOPEG_3381 yaeR; Hypothetical protein YaeR with similarity to glyoxylase family K08234 yaeR; glyoxylase I family protein
D SOPEG_3865 yggS; yggS K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SOPEG_0884 rfaL; putative lipid A core:surface polymer ligase K16567 exoQ; exopolysaccharide production protein ExoQ
D SOPEG_2540 yciS; Inner membrane protein yciS K08992 lapA; lipopolysaccharide assembly protein A
D SOPEG_2541 yciM; Heat shock (predicted periplasmic) protein YciM precursor K19804 lapB; lipopolysaccharide assembly protein B
D SOPEG_2652 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D SOPEG_0336 hemY; putative protoheme IX biogenesis protein K02498 hemY; HemY protein
D SOPEG_3617 ubiB; Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D SOPEG_3618 yigP; yigP K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D SOPEG_1172 yqiC; yqiC K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
C 99999 Others
D SOPEG_4041 DoxX family protein K15977 K15977; putative oxidoreductase
D SOPEG_0191 yqjF; Inner membrane protein YqjF K15977 K15977; putative oxidoreductase
D SOPEG_0625 hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SOPEG_3709 yhcO; Putative ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D SOPEG_3530 major cold shock protein K03704 cspA; cold shock protein
D SOPEG_1132 cspE; cold shock protein CspE K03704 cspA; cold shock protein
D SOPEG_2022 cspD; Cold shock protein CspD K03704 cspA; cold shock protein
D SOPEG_1715 cspC; cold shock protein CspC K03704 cspA; cold shock protein
D SOPEG_0290 yhgF; Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D SOPEG_2023 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SOPEG_4007 tig; Cell division trigger factor K03545 tig; trigger factor
D SOPEG_3694 putative sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D SOPEG_3037 ureE; Urease accessory protein UreF K03187 ureE; urease accessory protein
D SOPEG_3036 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D SOPEG_3035 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D SOPEG_3250 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SOPEG_1988 nrdH; Glutaredoxin-like protein NrdH required for reduction of Ribonucleotide reductase class Ib K06191 nrdH; glutaredoxin-like protein NrdH
D SOPEG_0297 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D SOPEG_1545 Selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
D SOPEG_1748 ssaE; putative secreted effector protein K18984 ssaE; secretion system chaperone SsaE
D SOPEG_1745 sscA; Type III secretion system chaparone SscA K15368 sscA; secretion system chaperone SscA
C 99976 Replication and repair
D SOPEG_3410 ygdG; exonuclease IX K01146 xni; protein Xni
D SOPEG_3620 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SOPEG_1303 yhbQ; putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D SOPEG_0601 phage terminase small subunit K07474 xtmA; phage terminase small subunit
D SOPEG_0600 hypothetical protein K06909 xtmB; phage terminase large subunit
D SOPEG_0354 yrdD; putative DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D SOPEG_0846 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_3654 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_1083 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_0326 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_3881 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_3142 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_3144 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_0729 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_3444 transposase ISSoEn4, ISL3 family K07485 K07485; transposase
D SOPEG_0757 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1574 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0350 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3215 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0796 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0805 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0832 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2577 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2624 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3467 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3490 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3499 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0861 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1761 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1775 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2680 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3517 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0012 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0028 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1787 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2724 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2734 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2736 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3578 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3581 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0975 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0979 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0998 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1882 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1889 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1892 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3633 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3649 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3652 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1036 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1039 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1045 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1047 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1054 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1947 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1949 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2824 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3678 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0203 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1076 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1109 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1999 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2007 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2008 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0260 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1156 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2043 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2909 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2911 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2918 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1179 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2962 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3000 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1276 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2137 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2167 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3933 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3952 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0396 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1310 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1321 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3094 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0478 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1350 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2241 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2265 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2284 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3158 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3170 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_4031 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_4054 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1419 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2318 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3189 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_4084 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_4116 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0577 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0606 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1480 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2381 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3245 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3251 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3267 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_4134 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0634 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0644 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0659 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1527 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2426 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3312 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0711 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1601 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_1613 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2463 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2472 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_3375 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_0739 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2519 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2567 transposase ISSoEn2, IS256 family K07493 K07493; putative transposase
D SOPEG_2721 Transposase-like Mu K07497 K07497; putative transposase
D SOPEG_2785 Transposase-like Mu K07497 K07497; putative transposase
D SOPEG_2189 transposase Mu family K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SOPEG_3978 ybaB; YbaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SOPEG_2907 putative inner membrane protein K21990 yfdC; formate-nitrite transporter family protein
D SOPEG_0633 yifK; putative transport protein YifK K03293 TC.AAT; amino acid transporter, AAT family
D SOPEG_2360 tppB; Di/tripeptide permease DtpA K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SOPEG_1359 yaaJ; alanine-sodium transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SOPEG_0836 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SOPEG_0618 yocS; Sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D SOPEG_2513 yciB; Intracellular septation protein IspA K06190 ispZ; intracellular septation protein
D SOPEG_0893 envC; Cell wall endopeptidase family M23/M37 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D SOPEG_2210 lpoB; Penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D SOPEG_3407 syd; SecY interacting protein Syd K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D SOPEG_1705 proQ; ProQ: influences osmotic activation of compatible solute ProP K03607 proQ; ProP effector
D SOPEG_2196 finO; putative fertility inhibition protein FinO K03607 proQ; ProP effector
D SOPEG_4035 uspA; universal stress global response regulator UspA K06149 uspA; universal stress protein A
D SOPEG_3349 typA; putative GTP-binding elongation factor K06207 typA; GTP-binding protein
D SOPEG_2004 ybeZ; Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SOPEG_1469 yeaG; PrkA family serine protein kinase K07180 prkA; serine protein kinase
D SOPEG_1176 ygiM; putative signal transduction protein (SH3 domain) K07184 ygiM; SH3 domain protein
D SOPEG_1283 ytjB; Lipoate-protein ligase A K07186 smp; membrane protein
D SOPEG_4016 yajQ; putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D SOPEG_2033 lolA; Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D SOPEG_2482 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D SOPEG_2897 mlaA; ABC transporter outer membrane lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SOPEG_0382 wzzE; regulator of length of O-antigen component of lipopolysaccharide chains K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D SOPEG_2366 slyB; Outer membrane lipoprotein pcp precursor K06077 slyB; outer membrane lipoprotein SlyB
D SOPEG_3390 hlpA; Outer membrane chaperone Skp K06142 hlpA; outer membrane protein
D SOPEG_1030 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D SOPEG_1270 nlpI; Lipoprotein nlpI precursor K05803 nlpI; lipoprotein NlpI
D SOPEG_1665 yeaY; Starvation lipoprotein Slp-like protein K07285 slp; outer membrane lipoprotein
D SOPEG_4009 yajG; putative lipoprotein YajG precursor K07286 yajG; uncharacterized lipoprotein
D SOPEG_2544 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D SOPEG_2274 osmE; DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE
D SOPEG_2902 ccmE; Cytochrome c-type biogenesis protein CcmE heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D SOPEG_2899 ccmH; putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SOPEG_3104 rodZ; transmembrane component of cytoskeleton K15539 rodZ; cytoskeleton protein RodZ
D SOPEG_3705 aaeX; efflux system membrane protein K21695 aaeX; protein AaeX
C 99994 Others
D SOPEG_0099 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D SOPEG_1428 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D SOPEG_1081 cutA2; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D SOPEG_2604 cutC; Cytoplasmic copper homeostasis protein cutC K06201 cutC; copper homeostasis protein
D SOPEG_1378 apaG; CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SOPEG_2870 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D SOPEG_1971 lipoprotein K05811 yfiM; putative lipoprotein
D SOPEG_1293 osmY; Osmotically inducible protein OsmY K04065 osmY; hyperosmotically inducible periplasmic protein
D SOPEG_1904 pqqD; Coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D SOPEG_3225 grcA; Pyruvate formate-lyase K06866 grcA; autonomous glycyl radical cofactor
D SOPEG_0990 erpA; putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D SOPEG_2389 sufA; Iron binding protein SufA for iron-sulfur cluster assembly K05997 sufA; Fe-S cluster assembly protein SufA
D SOPEG_2388 sufB; Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SOPEG_2386 sufD; Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SOPEG_3345 rbn; Ribonuclease BN K07058 K07058; membrane protein
D SOPEG_1084 fxsA2; phage suppressor of F exclusion K07113 fxsA; UPF0716 protein FxsA
D SOPEG_0730 fxsA1; phage suppressor of F exclusion K07113 fxsA; UPF0716 protein FxsA
D SOPEG_2384 sufE; Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D SOPEG_2313 hflD; lysogenization regulator K07153 hflD; high frequency lysogenization protein
D SOPEG_1424 msyB; secY/secA suppressor protein K12147 msyB; acidic protein MsyB
D SOPEG_0245 slyX; Protein slyX K03745 slyX; SlyX protein
D SOPEG_0355 smg; Protein of unknown function Smg K03747 smg; Smg protein
D SOPEG_1353 creA; uncharacterized protein CreA K05805 creA; CreA protein
D SOPEG_3880 yggI; yggI K02742 sprT; SprT protein
D SOPEG_2871 dedD; cell division protein DedD K03749 dedD; DedD protein
D SOPEG_0272 damX; DamX an inner membrane protein involved in bile resistance K03112 damX; DamX protein
D SOPEG_2740 sanA; vancomycin high temperature exclusion protein K03748 sanA; SanA protein
D SOPEG_2834 elaB; elaB K05594 elaB; ElaB protein
D SOPEG_2506 ycjF; ycjF K08990 ycjF; putative membrane protein
D SOPEG_0908 psiE; phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
C 99997 Function unknown
D SOPEG_2640 putative cytoplasmic protein K06884 K06884; uncharacterized protein
D SOPEG_2917 hypothetical protein K06884 K06884; uncharacterized protein
D SOPEG_1221 yjfP; esterase K06889 K06889; uncharacterized protein
D SOPEG_0637 Dienelactone hydrolase-related enzyme K06889 K06889; uncharacterized protein
D SOPEG_0508 ybhL; Putative membrane protein K06890 K06890; uncharacterized protein
D SOPEG_2233 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D SOPEG_3584 late control gene D protein K06905 D; Bacteriophage probable baseplate hub protein
D SOPEG_3583 putative phage tail protein K06906 gpU; phage tail protein
D SOPEG_2515 hypothetical protein K06940 K06940; uncharacterized protein
D SOPEG_1722 hypothetical protein K06991 K06991; uncharacterized protein
D SOPEG_2300 ycfP; ycfP K07000 K07000; uncharacterized protein
D SOPEG_1162 yqiA; Putative esterase K07000 K07000; uncharacterized protein
D SOPEG_0247 yheV; Putative cytoplasmic protein probably associated with Glutathione-regulated potassium-efflux K07070 K07070; uncharacterized protein
D SOPEG_2860 yfcH; putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D SOPEG_3065 hypothetical protein K07090 K07090; uncharacterized protein
D SOPEG_2886 yfcA; yfcA K07090 K07090; uncharacterized protein
D SOPEG_1231 ytfJ; ytfJ K07109 K07109; uncharacterized protein
D SOPEG_2260 Oxidoreductase short chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein
D SOPEG_2607 yecN; Putative membrane protein K07136 K07136; uncharacterized protein
D SOPEG_1623 ycbX; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K07140 K07140; MOSC domain-containing protein
D SOPEG_2752 yeiB; Putative inner membrane protein K07148 K07148; uncharacterized protein
D SOPEG_4121 yidD; yidD K08998 K08998; uncharacterized protein
D SOPEG_1137 ybeD; putative lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein
D SOPEG_1655 ycgN; ycgN K09160 K09160; uncharacterized protein
D SOPEG_1315 N-methylhydantoinase (ATP-hydrolyzing) K09703 K09703; uncharacterized protein
D SOPEG_2989 yaiI; yaiI K09768 K09768; uncharacterized protein
D SOPEG_2429 hypothetical protein K09779 K09779; uncharacterized protein
D SOPEG_2664 ycaR; ycaR K09791 K09791; uncharacterized protein
D SOPEG_3248 ratA; ratA K09801 K09801; uncharacterized protein
D SOPEG_1921 yeeX; yeeX K09802 K09802; uncharacterized protein
D SOPEG_1358 yaaA; yaaA K09861 K09861; uncharacterized protein
D SOPEG_3548 yjaG; yjaG K09891 K09891; uncharacterized protein
D SOPEG_4073 yifE; yifE K09897 K09897; uncharacterized protein
D SOPEG_2171 yciU; YciU K09901 K09901; uncharacterized protein
D SOPEG_1660 ycgL; ycgL K09902 K09902; uncharacterized protein
D SOPEG_2801 hypothetical protein K09904 K09904; uncharacterized protein
D SOPEG_2602 yecM; yecM K09907 K09907; uncharacterized protein
D SOPEG_0172 yhcB; Putative cytochrome d ubiquinol oxidase subunit III (Cytochrome bd-I oxidase subunit III) K09908 K09908; uncharacterized protein
D SOPEG_1463 yeaC; Uncharacterized protein YeaC K09916 K09916; uncharacterized protein
D SOPEG_1164 yqiB; Putative cytoplasmic protein K09920 K09920; uncharacterized protein
D SOPEG_0329 yigA; yigA K09921 K09921; uncharacterized protein
D SOPEG_1216 yjeT; Putative inner membrane protein YjeT (clustered with HflC) K09937 K09937; uncharacterized protein
D SOPEG_2941 hypothetical protein K09954 K09954; uncharacterized protein
D SOPEG_0035 Phage protein K09960 K09960; uncharacterized protein
D SOPEG_0597 hypothetical protein K09960 K09960; uncharacterized protein
D SOPEG_0033 Phage protein K09961 K09961; uncharacterized protein
D SOPEG_0599 hypothetical protein K09961 K09961; uncharacterized protein
D SOPEG_1692 hypothetical protein K09967 K09967; uncharacterized protein
D SOPEG_3971 ybaP; ybaP K09973 K09973; uncharacterized protein
D SOPEG_0216 yhbP; yhbP K09979 K09979; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024