+F Repair protein KO
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DNA Repair and Recombination Proteins - Populus euphratica (Euphrates poplar)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 105109359 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 105113011 activating signal cointegrator 1 complex subunit 3 isoform X1 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 105128935 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 105117522 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 105136027 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 105113638 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 105119278 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 105108239 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 105114618 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 105118486 methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 105110179 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 105128595 uncharacterized protein LOC105128595 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 105127019 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 105115377 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 105130373 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 105131769 DNA polymerase delta small subunit-like isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 105111224 DNA polymerase delta small subunit-like isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 105117328 DNA polymerase delta small subunit-like isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 105109677 uncharacterized protein LOC105109677 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 105119334 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
F 105139617 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 105140918 LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 105108222 DNA polymerase epsilon subunit 2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 105138609 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 105133091 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105131091 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105125234 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 105131328 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 105109648 DNA-repair protein XRCC1-like K10803 XRCC1; DNA-repair protein XRCC1
E 105117536 DNA-repair protein XRCC1-like K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 105113249 tyrosyl-DNA phosphodiesterase 1-like isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 105115091 tyrosyl-DNA phosphodiesterase 1-like isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 105141363 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 105113437 polynucleotide 3'-phosphatase ZDP-like K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 105118310 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 105123641 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 105128691 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 105131981 poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 105110991 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 105137878 poly [ADP-ribose] polymerase 2-like isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 105112989 DNA repair protein complementing XP-C cells homolog isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 105122882 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 105123946 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 105123368 ubiquitin receptor RAD23d isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 105113496 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 105132681 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 105132986 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 105133432 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105133967 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105115922 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 105117453 cullin-4-like K10609 CUL4; cullin 4
F 105141261 DNA damage-binding protein 1a isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 105116256 DNA damage-binding protein 1a-like isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 105111761 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 105140737 uncharacterized protein LOC105140737 K15082 RAD7; DNA repair protein RAD7
F 105122121 uncharacterized protein LOC105122121 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 105141660 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 105124082 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 105128036 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 105108385 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 105126425 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 105136461 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 105123875 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 105123877 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 105118090 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105108016 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105108084 DNA-directed RNA polymerase V subunit 5C-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105107399 DNA-directed RNA polymerase V subunit 5C-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 105129624 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 105137529 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 105112643 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 105134658 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 105111328 DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 105112130 DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 105112131 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 105122678 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 105115018 DNA-directed RNA polymerases II, IV and V subunit 9B-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 105128182 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 105136317 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 105110733 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F 105133432 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105133967 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 105115922 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 105117453 cullin-4-like K10609 CUL4; cullin 4
F 105141261 DNA damage-binding protein 1a isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 105116256 DNA damage-binding protein 1a-like isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 105107590 DNA excision repair protein ERCC-8 isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
F 105118245 DNA excision repair protein ERCC-8-like isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 105110637 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 105135198 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 105124759 LOW QUALITY PROTEIN: UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 105135625 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 105113702 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 105129084 DNA repair helicase XPB1-like isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 105126869 DNA repair helicase UVH6 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 105113192 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 105124584 probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 105107264 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 105107223 general transcription factor IIH subunit 3 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 105128051 general transcription factor IIH subunit 4 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 105133375 cyclin-dependent kinase D-2-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 105135765 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 105134200 cyclin-H1-1 isoform X1 K06634 CCNH; cyclin H
E 105121212 uncharacterized protein LOC105121212 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 105131883 uncharacterized protein LOC105131883 isoform X1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 105114663 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 105128185 replication protein A 70 kDa DNA-binding subunit E-like K07466 RFA1; replication factor A1
E 105112548 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 105139278 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 105114815 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 105109342 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 105130497 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 105110766 replication protein A 14 kDa subunit A-like K10740 RPA3; replication factor A3
E 105125445 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 105134151 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 105141874 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 105116335 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 105131328 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105116012 uncharacterized protein LOC105116012 isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 105123626 cullin-3A K03869 CUL3; cullin 3
E 105126651 cullin-3A-like K03869 CUL3; cullin 3
E 105131123 transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E 105114191 transcription elongation factor B polypeptide 3 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 105114805 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 105142659 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 105116602 DNA mismatch repair protein MSH7 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
E 105137312 DNA mismatch repair protein MSH6-like isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 105130635 DNA mismatch repair protein MLH1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 105132007 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 105124042 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 105130373 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 105131769 DNA polymerase delta small subunit-like isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 105111224 DNA polymerase delta small subunit-like isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 105117328 DNA polymerase delta small subunit-like isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 105109677 uncharacterized protein LOC105109677 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 105119334 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E 105139617 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 105114663 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 105128185 replication protein A 70 kDa DNA-binding subunit E-like K07466 RFA1; replication factor A1
E 105112548 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 105139278 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 105114815 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 105109342 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 105130497 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 105110766 replication protein A 14 kDa subunit A-like K10740 RPA3; replication factor A3
E 105125445 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 105117794 replication factor C subunit 1-like K10754 RFC1; replication factor C subunit 1
E 105134541 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 105132154 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 105132155 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 105110174 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 105127776 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 105115527 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 105111187 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 105128266 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 105116208 uncharacterized protein LOC105116208 K10756 RFC3_5; replication factor C subunit 3/5
E 105126716 uncharacterized protein LOC105126716 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 105133091 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105131091 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 105108036 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 105140271 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 105131328 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 105121133 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 105139687 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 105110325 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 105142710 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 105141262 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 105125619 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 105119625 uncharacterized protein LOC105119625 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 105128868 BRCA1-A complex subunit BRE-like isoform X1 K12173 BRE; BRCA1-A complex subunit BRE
E 105140092 BRCA1-A complex subunit BRE-like isoform X1 K12173 BRE; BRCA1-A complex subunit BRE
E 105133390 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 105132840 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 105137413 BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 105109415 DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 105137966 BRCT domain-containing protein At4g02110-like isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 105139687 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 105110325 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 105142710 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 105118053 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 105125913 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 105136310 LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 105136310 LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105132345 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 105119914 DNA repair protein RAD51 homolog 3-like isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 105139286 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 105111291 uncharacterized protein LOC105111291 K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 105123140 uncharacterized protein LOC105123140 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 105134453 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105142041 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105134667 SNF2 domain-containing protein CLASSY 3-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105131257 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105110267 SNF2 domain-containing protein CLASSY 1-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 105112473 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 105128166 mediator of RNA polymerase II transcription subunit 34 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 105134283 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 105134215 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 105114528 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105124080 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105137494 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 105114528 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105124080 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105130366 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105115983 DNA topoisomerase 3-alpha-like isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105107691 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105125281 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 105111982 uncharacterized protein LOC105111982 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
E 105118353 uncharacterized protein LOC105118353 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 105114663 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 105128185 replication protein A 70 kDa DNA-binding subunit E-like K07466 RFA1; replication factor A1
E 105112548 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 105139278 replication protein A 32 kDa subunit B-like isoform X1 K10739 RFA2; replication factor A2
E 105114815 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 105109342 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 105130497 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 105110766 replication protein A 14 kDa subunit A-like K10740 RPA3; replication factor A3
E 105125445 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 105141851 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 105113226 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 105114463 serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 105119270 uncharacterized protein LOC105119270 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 105118991 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 105114981 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 105122706 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 105120464 AP-5 complex subunit beta-1 K19022 AP5B1; AP-5 complex subunit beta-1
E 105116216 AP-5 complex subunit mu isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
E 105130162 uncharacterized protein LOC105130162 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 105117270 structural maintenance of chromosomes protein 5-like isoform X1 K22803 SMC5; structural maintenance of chromosomes protein 5
E 105141725 structural maintenance of chromosomes protein 5-like isoform X1 K22803 SMC5; structural maintenance of chromosomes protein 5
E 105128130 structural maintenance of chromosomes protein 6B-like isoform X1 K22804 SMC6; structural maintenance of chromosomes protein 6
E 105112320 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 105130111 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 105118944 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 105131781 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 105126153 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 105126402 crossover junction endonuclease EME1B-like isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 105137900 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 105114747 probable 26S proteasome complex subunit sem1-1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 105113689 structure-specific endonuclease subunit SLX1 homolog K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 105137678 uncharacterized protein LOC105137678 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 105123220 uncharacterized protein LOC105123220 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 105133235 flap endonuclease GEN-like 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 105142657 flap endonuclease GEN-like 2 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 105123888 uncharacterized protein LOC105123888 isoform X1 K19026 SPG11; spatacsin
E 105122334 uncharacterized protein LOC105122334 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 105112828 mortality factor 4-like protein 1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 105129024 chromatin modification-related protein EAF3-like isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 105139731 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 105132372 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 105119629 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 105110544 fidgetin-like protein 1 isoform X1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 105110546 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 105108829 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 105137921 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 105131643 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 105113219 uncharacterized protein LOC105113219 isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 105126712 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 105116011 single-stranded DNA-bindig protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 105139348 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 105132515 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 105139687 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 105110325 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 105120936 DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E 105123641 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 105141363 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 105141426 uncharacterized protein LOC105141426 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 105125881 uncharacterized protein LOC105125881 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 105123782 E3 ubiquitin-protein ligase FANCL isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 105108485 putative ATP-dependent RNA helicase mfh2 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 105136569 uncharacterized protein C2D10.16 K11511 APITD1; centromere protein S
E 105136705 centromere protein X-like K15360 STRA13; centromere protein X
E 105117658 centromere protein X-like isoform X1 K15360 STRA13; centromere protein X
E 105119424 uncharacterized protein LOC105119424 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 105114528 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105124080 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 105130366 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105115983 DNA topoisomerase 3-alpha-like isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105107691 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 105125281 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 105111982 uncharacterized protein LOC105111982 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
E 105118353 uncharacterized protein LOC105118353 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 105110958 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 105115540 Fanconi anemia group I protein isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 105118053 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 105125913 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 105132840 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 105138401 fanconi-associated nuclease 1 homolog K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 105136310 LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 105132345 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 105119914 DNA repair protein RAD51 homolog 3-like isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 105125373 uncharacterized protein LOC105125373 K11137 TELO2; telomere length regulation protein
E 105110458 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
E 105131295 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 105131694 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 105141144 phytochrome-associated serine/threonine-protein phosphatase-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 105114992 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 105137025 serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 105138783 telomerase Cajal body protein 1 isoform X1 K23314 WRAP53; telomerase Cajal body protein 1
E 105113308 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 105121133 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 105124149 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 105129805 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 105108588 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 105125035 LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 105108908 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105132466 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105141594 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 105111933 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 105130939 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 105130942 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 105120190 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 105136928 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 105137369 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 105137371 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 105137390 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 105137392 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 105125315 ubiquitin-conjugating enzyme E2 variant 1A-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105141392 ubiquitin-conjugating enzyme E2 variant 1D-like isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105139339 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105123769 ubiquitin-conjugating enzyme E2 variant 1A K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 105129269 ubiquitin-conjugating enzyme E2 35-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 105112499 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 105133091 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 105131091 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 105125079 cell cycle checkpoint control protein RAD9A-like K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 105134312 uncharacterized protein LOC105134312 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 105113288 uncharacterized protein LOC105113288 K10903 HUS1; HUS1 checkpoint protein
D 105121539 uncharacterized protein LOC105121539 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 105138696 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 105132154 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 105132155 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 105110174 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 105127776 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 105115527 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 105111187 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 105128266 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 105116208 uncharacterized protein LOC105116208 K10756 RFC3_5; replication factor C subunit 3/5
D 105126716 uncharacterized protein LOC105126716 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 105121539 uncharacterized protein LOC105121539 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 105111704 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 105115438 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 105123670 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 105125373 uncharacterized protein LOC105125373 K11137 TELO2; telomere length regulation protein
D 105112835 uncharacterized protein LOC105112835 K20403 TTI1; TELO2-interacting protein 1
D 105136057 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 105121109 large proline-rich protein bag6 isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 105122697 uncharacterized protein LOC105122697 isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 105127425 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
D 105127235 Golgi to ER traffic protein 4 homolog isoform X1 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 105141179 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 105128541 serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 105112501 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105115844 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 105129274 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105115915 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 105111200 14-3-3 protein 7-like K06630 YWHAE; 14-3-3 protein epsilon
D 105123361 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 105116442 14-3-3-like protein GF14 iota isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105120303 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 105114656 14-3-3-like protein isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 105120030 14-3-3 protein 7 K06630 YWHAE; 14-3-3 protein epsilon
D 105120417 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 105132021 wee1-like protein kinase isoform X1 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 105115508 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 105111439 uncharacterized protein LOC105111439 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 105114963 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105134924 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105111912 serine/threonine-protein kinase Nek2-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105131818 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105126818 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105116641 serine/threonine-protein kinase Nek5-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105122730 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105131250 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105137873 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 105138199 protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D 105141573 protein downstream neighbor of Son-like isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 105140020 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 105125467 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 105131531 vacuolar protein sorting-associated protein 4B-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 105140928 vacuolar protein sorting-associated protein 4B-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 105135087 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 105124768 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 105114978 guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 105127123 helicase and polymerase-containing protein TEBICHI-like isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 105129733 LOW QUALITY PROTEIN: DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 105109835 DNA polymerase V-like K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 105140770 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 105132097 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 105122097 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 105124577 5' exonuclease Apollo isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 105142523 5' exonuclease Apollo isoform X1 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 105117716 endonuclease V-like K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 105109849 endonuclease V-like isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 105109865 endonuclease V-like K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 105114985 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 105138768 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 105138769 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 105113323 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 105128887 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 105137414 pre-mRNA-processing factor 19 homolog 2-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 105117482 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 105129408 pre-mRNA-processing factor 19 homolog 2-like isoform X1 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 105135364 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 105133909 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 105108040 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 105117039 protein pleiotropic regulatory locus 1-like isoform X1 K12862 PLRG1; pleiotropic regulator 1
D 105110541 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 105123446 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 105123454 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 105125595 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 105126394 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 105139498 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 105123894 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 105115165 ribonucleoside-diphosphate reductase small chain A isoform X1 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 105114361 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 105113104 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 105128935 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 105117522 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 105126592 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 105126593 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 105128747 uncharacterized protein LOC105128747 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 105136027 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 105113638 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 105130615 uncharacterized protein LOC105130615 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105121177 uncharacterized protein LOC105121177 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105123272 uncharacterized protein LOC105123272 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105113658 uncharacterized protein LOC105113658 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105122922 uncharacterized protein LOC105122922 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105114510 uncharacterized protein LOC105114510 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105117079 uncharacterized protein LOC105117079 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105118177 uncharacterized protein LOC105118177 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105124122 uncharacterized protein LOC105124122 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105131909 uncharacterized protein LOC105131909 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105120690 uncharacterized protein LOC105120690 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 105139919 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 105128595 uncharacterized protein LOC105128595 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 105127019 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 105131736 apurinic endonuclease-redox protein-like isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 105114444 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 105130152 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 105114444 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 105130152 DNA polymerase I A, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 20160422 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 20160420 rpoC2; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 20160421 rpoC1; RNA polymerase beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 20160478 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 105128046 uncharacterized protein LOC105128046 isoform X1 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 105114186 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 105111144 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 105111260 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 105114869 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 105111144 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 105111260 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 105114869 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
E 105111717 uncharacterized protein LOC105111717 isoform X1 K04485 radA; DNA repair protein RadA/Sms
E 105135468 uncharacterized protein LOC105135468 isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 105141076 DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 105117141 DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 105127587 DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X1 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
F 105107992 DNA gyrase subunit B, chloroplastic/mitochondrial-like K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 105113850 Werner syndrome ATP-dependent helicase-like isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 105111144 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
D 105111260 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 105114869 DNA repair protein recA homolog 3, mitochondrial-like isoform X1 K03553 recA; recombination protein RecA
D 105114186 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 105123446 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 105123454 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 105125595 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024