+D GENES KO
#
KEGG Orthology (KO) - Phascolarctobacterium faecium
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pfac00010]
D PFJ30894_02129 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFJ30894_01038 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PFJ30894_00001 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PFJ30894_01796 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFJ30894_01996 pgk_tpi; Bifunctional PGK/TIM K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFJ30894_01997 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFJ30894_01995 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFJ30894_01751 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFJ30894_01994 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFJ30894_01374 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFJ30894_01902 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PFJ30894_00084 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PFJ30894_00073 korA_1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00230 korA_2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02299 korA_3; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00074 korB_1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00231 korB_2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02298 korB_3; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02211 ldhB; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00020 Citrate cycle (TCA cycle) [PATH:pfac00020]
D PFJ30894_00073 korA_1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00230 korA_2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02299 korA_3; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00074 korB_1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00231 korB_2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02298 korB_3; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00232 porC_1; Pyruvate synthase subunit PorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PFJ30894_02297 porC_2; Pyruvate synthase subunit PorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PFJ30894_00229 Ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PFJ30894_02300 Ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PFJ30894_00905 cat1_2; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PFJ30894_00768 cat1_1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PFJ30894_02229 ttdA; L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PFJ30894_02228 fumA; Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PFJ30894_00786 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PFJ30894_00084 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pfac00030]
D PFJ30894_02129 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFJ30894_01595 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PFJ30894_01734 tkt_2; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_01735 dxs_2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_01487 tkt_1; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_02069 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PFJ30894_00809 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PFJ30894_00162 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PFJ30894_01299 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PFJ30894_02101 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PFJ30894_00800 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PFJ30894_01796 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFJ30894_00001 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PFJ30894_01038 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pfac00040]
D PFJ30894_00412 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D PFJ30894_02340 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PFJ30894_01595 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PFJ30894_01663 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pfac00051]
D PFJ30894_01729 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PFJ30894_02341 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PFJ30894_01730 algA; Alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFJ30894_01736 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PFJ30894_01732 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PFJ30894_01663 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PFJ30894_01038 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PFJ30894_00001 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PFJ30894_01796 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFJ30894_01996 pgk_tpi; Bifunctional PGK/TIM K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFJ30894_00809 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:pfac00052]
D PFJ30894_02339 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFJ30894_01527 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFJ30894_02340 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PFJ30894_01038 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pfac00500]
D PFJ30894_02340 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PFJ30894_02129 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pfac00520]
D PFJ30894_00422 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PFJ30894_02115 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PFJ30894_02116 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PFJ30894_00799 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PFJ30894_00826 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PFJ30894_02011 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PFJ30894_00815 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PFJ30894_01733 rmd; GDP-6-deoxy-D-mannose reductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D PFJ30894_02340 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PFJ30894_02339 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFJ30894_01527 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFJ30894_02129 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFJ30894_01729 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PFJ30894_02341 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PFJ30894_01730 algA; Alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFJ30894_01736 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PFJ30894_01731 fdtB; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D PFJ30894_01732 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:pfac00620]
D PFJ30894_00084 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PFJ30894_00073 korA_1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00230 korA_2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02299 korA_3; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00074 korB_1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00231 korB_2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02298 korB_3; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_01260 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_02310 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_01667 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PFJ30894_01374 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_00905 cat1_2; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PFJ30894_00768 cat1_1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PFJ30894_02211 ldhB; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PFJ30894_00021 gloA; Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PFJ30894_01546 pksB; putative polyketide biosynthesis zinc-dependent hydrolase PksB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PFJ30894_01817 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PFJ30894_00361 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PFJ30894_01797 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D PFJ30894_01798 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D PFJ30894_01799 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D PFJ30894_00646 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D PFJ30894_02230 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PFJ30894_01836 Methylmalonyl-CoA carboxyltransferase 5S subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D PFJ30894_00913 gcdB_1; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00917 gcdB_2; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00493 madB; Carboxybiotin decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00786 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PFJ30894_02229 ttdA; L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PFJ30894_02228 fumA; Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PFJ30894_01902 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_01116 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pfac00630]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_00909 glyoxalase I K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFJ30894_00874 scpA_3; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00875 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00907 scpA_4; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00317 scpA_1; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00906 mutB_2; Methylmalonyl-CoA mutase large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_00769 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_00020 ghrB; Glyoxylate/hydroxypyruvate reductase B K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PFJ30894_00218 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PFJ30894_01142 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00577 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00811 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism [PATH:pfac00640]
D PFJ30894_01260 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_02310 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_01667 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PFJ30894_00909 glyoxalase I K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFJ30894_00874 scpA_3; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00875 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00907 scpA_4; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00317 scpA_1; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00906 mutB_2; Methylmalonyl-CoA mutase large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_00769 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_02211 ldhB; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:pfac00650]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_01339 atoA; Acetate CoA-transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PFJ30894_00913 gcdB_1; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00917 gcdB_2; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00493 madB; Carboxybiotin decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00916 gcdC_2; Glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PFJ30894_00912 gcdC_1; Glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PFJ30894_00911 Oxaloacetate decarboxylase, gamma chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PFJ30894_00915 Oxaloacetate decarboxylase, gamma chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PFJ30894_00905 cat1_2; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PFJ30894_00768 cat1_1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PFJ30894_00084 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PFJ30894_00073 korA_1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00230 korA_2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02299 korA_3; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00074 korB_1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00231 korB_2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02298 korB_3; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02307 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PFJ30894_00994 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00410 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00989 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pfac00660]
D PFJ30894_00994 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00410 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00989 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PFJ30894_00991 dmdA_1; 2,3-dimethylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_01308 dmdA_2; 2,3-dimethylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_00992 DmdB_1; 2,3-dimethylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_01309 DmdB_2; 2,3-dimethylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_00993 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D PFJ30894_01996 pgk_tpi; Bifunctional PGK/TIM K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pfac00190]
D PFJ30894_00900 hndA; NADP-reducing hydrogenase subunit HndA K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PFJ30894_01620 hndD_2; NADP-reducing hydrogenase subunit HndC K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PFJ30894_00820 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PFJ30894_00822 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PFJ30894_00821 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PFJ30894_00823 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PFJ30894_00817 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PFJ30894_00819 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PFJ30894_00818 atpE; ATP synthase subunit c, sodium ion specific K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PFJ30894_00672 Cobalt-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PFJ30894_01659 ppaX; Pyrophosphatase PpaX K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
D PFJ30894_00029 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pfac00710]
D PFJ30894_01996 pgk_tpi; Bifunctional PGK/TIM K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFJ30894_01997 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFJ30894_01796 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFJ30894_00001 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PFJ30894_01734 tkt_2; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_01735 dxs_2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_01487 tkt_1; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_00809 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PFJ30894_01595 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PFJ30894_02069 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
C 00720 Other carbon fixation pathways [PATH:pfac00720]
D PFJ30894_00084 nifJ; Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PFJ30894_01902 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PFJ30894_00786 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PFJ30894_02229 ttdA; L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PFJ30894_02228 fumA; Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_00073 korA_1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00230 korA_2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02299 korA_3; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00074 korB_1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00231 korB_2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_02298 korB_3; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PFJ30894_00232 porC_1; Pyruvate synthase subunit PorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PFJ30894_02297 porC_2; Pyruvate synthase subunit PorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PFJ30894_00229 Ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PFJ30894_02300 Ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PFJ30894_00909 glyoxalase I K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFJ30894_00874 scpA_3; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00875 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00906 mutB_2; Methylmalonyl-CoA mutase large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_00769 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_00907 scpA_4; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00317 scpA_1; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00237 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PFJ30894_00236 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PFJ30894_00864 fchA; Methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D PFJ30894_02330 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PFJ30894_01667 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PFJ30894_01260 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_02310 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:pfac00680]
D PFJ30894_00811 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFJ30894_01994 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFJ30894_01796 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PFJ30894_00001 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PFJ30894_01038 pfkA1; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PFJ30894_01965 gltA; Glutamate synthase [NADPH] large chain K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D PFJ30894_01260 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_02310 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_01902 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PFJ30894_01995 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFJ30894_01751 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFJ30894_00986 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFJ30894_02192 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:pfac00910]
D PFJ30894_01789 nifD_1; Nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D PFJ30894_01790 nifH1_1; Nitrogenase iron protein 1 K02588 nifH; nitrogenase iron protein NifH
D PFJ30894_01861 nifH1_2; Nitrogenase iron protein 1 K02588 nifH; nitrogenase iron protein NifH
D PFJ30894_00555 hcp; Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PFJ30894_01269 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PFJ30894_01013 gdhA; Glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D PFJ30894_01142 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00577 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_02215 gltB_2; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PFJ30894_00015 gltD_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_01666 gltD_2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_00788 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_02216 gltB_3; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_00759 mtcA1; Beta-carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pfac00920]
D PFJ30894_02044 ssuA_2; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein
D PFJ30894_02042 ssuC_2; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D PFJ30894_02043 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PFJ30894_01572 nrnA_2; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PFJ30894_00014 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PFJ30894_00345 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pfac00061]
D PFJ30894_00357 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01268 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01541 acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01542 acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01266 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PFJ30894_00358 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_00360 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01265 fabHA; 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01537 fabH_3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01538 fabH_4; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01270 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFJ30894_00355 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_01267 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_00846 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PFJ30894_01353 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D PFJ30894_00130 lcfB; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pfac00071]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_00130 lcfB; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pfac00561]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_00533 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PFJ30894_00532 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PFJ30894_01264 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PFJ30894_01646 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PFJ30894_01640 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PFJ30894_00040 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PFJ30894_01624 ugtP; Processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:pfac00564]
D PFJ30894_00420 lhgO; L-2-hydroxyglutarate oxidase LhgO K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PFJ30894_01646 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PFJ30894_01640 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PFJ30894_00040 dagK; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PFJ30894_01557 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PFJ30894_01657 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PFJ30894_01656 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PFJ30894_01576 egsA; Glycerol-1-phosphate dehydrogenase [NAD(P)+] K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D PFJ30894_00948 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pfac00230]
D PFJ30894_01481 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PFJ30894_02101 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PFJ30894_00800 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PFJ30894_01056 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PFJ30894_01060 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PFJ30894_01058 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PFJ30894_01704 purL; Phosphoribosylformylglycinamidine synthase 2 K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PFJ30894_01057 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PFJ30894_01055 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PFJ30894_00279 purC_1; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PFJ30894_00576 purC_2; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PFJ30894_00310 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PFJ30894_02109 purH_2; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PFJ30894_00863 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PFJ30894_02239 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PFJ30894_01419 Laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PFJ30894_02371 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PFJ30894_01631 guaB_3; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PFJ30894_01061 guaB_2; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PFJ30894_01715 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PFJ30894_02232 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PFJ30894_00988 xpt; Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PFJ30894_00509 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PFJ30894_02257 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PFJ30894_01582 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PFJ30894_00772 nrdD_1; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PFJ30894_02047 nrdD_2; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PFJ30894_01346 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PFJ30894_01819 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PFJ30894_00030 guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PFJ30894_00031 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PFJ30894_00309 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PFJ30894_00024 adeC; Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D PFJ30894_01100 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PFJ30894_00547 allC; Allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
C 00240 Pyrimidine metabolism [PATH:pfac00240]
D PFJ30894_01896 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PFJ30894_01897 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PFJ30894_01899 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PFJ30894_01898 pyrC_1; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PFJ30894_02309 putative metallo-dependent hydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PFJ30894_01894 pyrD; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PFJ30894_01895 pyrK_2; Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PFJ30894_01892 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PFJ30894_01893 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PFJ30894_01552 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PFJ30894_01715 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PFJ30894_00923 yhdE; Maf-like protein YhdE K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PFJ30894_00004 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PFJ30894_01639 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PFJ30894_01838 thrS; Threonine--tRNA ligase 1 K00876 udk; uridine kinase [EC:2.7.1.48]
D PFJ30894_00863 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PFJ30894_02239 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PFJ30894_02102 udp; Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PFJ30894_00812 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PFJ30894_02104 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PFJ30894_01908 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PFJ30894_00127 codA; Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PFJ30894_00772 nrdD_1; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PFJ30894_02047 nrdD_2; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PFJ30894_00813 tadA_1; tRNA-specific adenosine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PFJ30894_00385 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PFJ30894_01699 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PFJ30894_01033 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D PFJ30894_01846 putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pfac00250]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_02184 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PFJ30894_00781 ansA_2; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PFJ30894_00490 ansA_1; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PFJ30894_02014 2-oxoglutaramate amidase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PFJ30894_02121 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PFJ30894_02120 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PFJ30894_00309 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PFJ30894_00310 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PFJ30894_01899 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PFJ30894_02215 gltB_2; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PFJ30894_00015 gltD_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_01666 gltD_2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_00788 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_02216 gltB_3; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PFJ30894_01013 gdhA; Glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D PFJ30894_01142 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00577 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_01896 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PFJ30894_01897 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PFJ30894_02115 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PFJ30894_01056 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pfac00260]
D PFJ30894_01692 lysC_1; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01840 lysC_2; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01693 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFJ30894_01648 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PFJ30894_01649 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PFJ30894_01822 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PFJ30894_00215 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PFJ30894_00811 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFJ30894_01995 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFJ30894_01751 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PFJ30894_00986 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFJ30894_02192 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PFJ30894_01657 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PFJ30894_00107 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PFJ30894_00108 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PFJ30894_00798 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PFJ30894_02025 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PFJ30894_02026 trpB_2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PFJ30894_00016 trpB_1; Tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pfac00270]
D PFJ30894_00014 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PFJ30894_00345 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PFJ30894_02328 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFJ30894_01585 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PFJ30894_01145 speD; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PFJ30894_02146 speH; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PFJ30894_01146 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PFJ30894_01419 Laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PFJ30894_01664 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PFJ30894_01660 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D PFJ30894_01661 mtnA; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PFJ30894_01839 aspC_2; Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PFJ30894_01662 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PFJ30894_01692 lysC_1; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01840 lysC_2; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01693 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFJ30894_01648 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_02211 ldhB; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PFJ30894_00107 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PFJ30894_00108 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PFJ30894_00986 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFJ30894_02192 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pfac00280]
D PFJ30894_00909 glyoxalase I K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PFJ30894_00874 scpA_3; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00875 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00907 scpA_4; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00317 scpA_1; Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PFJ30894_00906 mutB_2; Methylmalonyl-CoA mutase large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_00769 scpA_2; Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_02307 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pfac00290]
D PFJ30894_00798 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PFJ30894_00991 dmdA_1; 2,3-dimethylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_01308 dmdA_2; 2,3-dimethylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_00992 DmdB_1; 2,3-dimethylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_01309 DmdB_2; 2,3-dimethylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PFJ30894_00993 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PFJ30894_00994 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00410 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00989 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PFJ30894_00990 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PFJ30894_01352 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PFJ30894_01116 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pfac00300]
D PFJ30894_01648 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PFJ30894_01692 lysC_1; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01840 lysC_2; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01693 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFJ30894_01691 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PFJ30894_01694 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PFJ30894_02123 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFJ30894_02358 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PFJ30894_02357 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PFJ30894_00551 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PFJ30894_01014 lysN; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PFJ30894_02059 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PFJ30894_02058 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pfac00310]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_01719 patA_2; Putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D PFJ30894_01339 atoA; Acetate CoA-transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PFJ30894_01958 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pfac00220]
D PFJ30894_02122 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PFJ30894_02121 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PFJ30894_02120 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PFJ30894_01142 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00577 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_01896 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PFJ30894_01897 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PFJ30894_01013 gdhA; Glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01180 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PFJ30894_02125 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PFJ30894_02124 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PFJ30894_02126 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PFJ30894_02123 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pfac00330]
D PFJ30894_00126 crnA; Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D PFJ30894_00127 codA; Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PFJ30894_00025 adiA; Biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D PFJ30894_00386 speA; Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PFJ30894_01778 N-carbamoyl-D-amino acid hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PFJ30894_00387 ldc; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PFJ30894_01146 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PFJ30894_01145 speD; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PFJ30894_02146 speH; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PFJ30894_01719 patA_2; Putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_00080 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PFJ30894_01422 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PFJ30894_00950 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PFJ30894_00951 proA_1; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01958 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:pfac00340]
D PFJ30894_00664 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PFJ30894_00663 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PFJ30894_00671 hisE; Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PFJ30894_00669 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PFJ30894_00668 hisH1; Imidazole glycerol phosphate synthase subunit HisH 1 K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PFJ30894_00670 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PFJ30894_00667 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PFJ30894_00666 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFJ30894_00478 hisK; Histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D PFJ30894_00665 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pfac00350]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_00666 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFJ30894_01839 aspC_2; Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00360 Phenylalanine metabolism [PATH:pfac00360]
D PFJ30894_01632 paaG; 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_00666 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFJ30894_01839 aspC_2; Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PFJ30894_01958 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PFJ30894_00080 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pfac00380]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_00080 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pfac00400]
D PFJ30894_00970 aroF_1; Phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PFJ30894_00971 aroF_2; Phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PFJ30894_00973 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PFJ30894_00979 yqhS; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PFJ30894_00978 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PFJ30894_00974 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PFJ30894_00975 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PFJ30894_02031 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PFJ30894_02030 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PFJ30894_02029 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PFJ30894_02027 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PFJ30894_02028 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PFJ30894_02025 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PFJ30894_02026 trpB_2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PFJ30894_00016 trpB_1; Tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PFJ30894_00976 pheA; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PFJ30894_01647 hypothetical protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D PFJ30894_00972 tyrA; T-protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PFJ30894_02033 pheC; Cyclohexadienyl dehydratase precursor K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_00666 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFJ30894_01839 aspC_2; Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pfac00410]
D PFJ30894_00486 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_00485 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PFJ30894_01846 putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:pfac00430]
D PFJ30894_01013 gdhA; Glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D PFJ30894_01667 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PFJ30894_01260 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PFJ30894_02310 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pfac00440]
D PFJ30894_01402 aminoalkylphosphonic acid N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280]
D PFJ30894_00328 phnI; Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D PFJ30894_00330 Phosphonate metabolism protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D PFJ30894_00329 phnH; Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D PFJ30894_00323 phnL; Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D PFJ30894_00324 phnM; Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PFJ30894_00327 phnJ; Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D PFJ30894_00322 hypothetical protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:pfac00450]
D PFJ30894_02328 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFJ30894_00076 trxB_1; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PFJ30894_01005 trxB_3; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PFJ30894_00389 trxB_2; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PFJ30894_00380 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pfac00460]
D PFJ30894_00781 ansA_2; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PFJ30894_00490 ansA_1; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PFJ30894_00811 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pfac00470]
D PFJ30894_00191 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PFJ30894_01958 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PFJ30894_02053 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFJ30894_00633 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3]
D PFJ30894_02056 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PFJ30894_02184 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PFJ30894_02358 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PFJ30894_00551 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pfac00480]
D PFJ30894_01688 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PFJ30894_00387 ldc; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PFJ30894_01146 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pfac00540]
D PFJ30894_00847 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PFJ30894_00845 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PFJ30894_00843 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PFJ30894_00848 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PFJ30894_00849 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PFJ30894_00854 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PFJ30894_00853 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PFJ30894_00855 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PFJ30894_00852 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PFJ30894_00851 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PFJ30894_00856 Phosphatidylinositol mannoside acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PFJ30894_00421 yeiU; Inner membrane protein YeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D PFJ30894_00060 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PFJ30894_00059 hldE; Bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PFJ30894_00057 gmhB; D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PFJ30894_00058 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PFJ30894_00056 rfaC; Lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PFJ30894_00055 rfaQ; Lipopolysaccharide core heptosyltransferase RfaQ K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PFJ30894_00051 cptA_1; Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PFJ30894_00457 cptA_2; Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pfac00542]
D PFJ30894_00814 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pfac00541]
D PFJ30894_02340 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PFJ30894_02339 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFJ30894_01527 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PFJ30894_01728 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PFJ30894_01729 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PFJ30894_02341 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PFJ30894_01730 algA; Alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PFJ30894_01736 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PFJ30894_01732 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PFJ30894_01731 fdtB; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D PFJ30894_00799 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PFJ30894_00815 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:pfac00550]
D PFJ30894_00826 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PFJ30894_02011 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PFJ30894_02054 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PFJ30894_02056 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PFJ30894_02059 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PFJ30894_02053 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFJ30894_02058 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PFJ30894_01556 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PFJ30894_01039 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFJ30894_02057 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PFJ30894_02055 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PFJ30894_01810 pbpF_1; Penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFJ30894_00928 spoVD_2; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PFJ30894_00238 spoVD_1; Stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
C 00552 Teichoic acid biosynthesis [PATH:pfac00552]
D PFJ30894_01039 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFJ30894_00814 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PFJ30894_01655 tagA; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PFJ30894_00965 lytR; Transcriptional regulator LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PFJ30894_00171 yvhJ; Putative transcriptional regulator YvhJ K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PFJ30894_01624 ugtP; Processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pfac00543]
D PFJ30894_00814 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PFJ30894_00014 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pfac00730]
D PFJ30894_00090 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PFJ30894_01488 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PFJ30894_00304 tcdA_1; tRNA threonylcarbamoyladenosine dehydratase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D PFJ30894_00343 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFJ30894_01916 thiH_3; 2-iminoacetate synthase K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PFJ30894_00306 thiH_1; 2-iminoacetate synthase K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PFJ30894_01476 dxs_1; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PFJ30894_00305 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PFJ30894_01489 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PFJ30894_00307 tenI; Regulatory protein TenI K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PFJ30894_01490 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PFJ30894_01594 rsgA_2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PFJ30894_00995 rsgA_1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PFJ30894_00426 Thiamin pyrophosphokinase, catalytic domain K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PFJ30894_01100 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pfac00740]
D PFJ30894_01610 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PFJ30894_01608 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PFJ30894_01611 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PFJ30894_01609 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PFJ30894_01574 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PFJ30894_01489 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PFJ30894_01481 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PFJ30894_01606 pad1_2; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_00263 pad1_1; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_02155 pad1_3; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pfac00750]
D PFJ30894_00174 pdxK; Pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PFJ30894_02192 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PFJ30894_01822 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PFJ30894_00301 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PFJ30894_00300 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pfac00760]
D PFJ30894_01623 pncB2; Nicotinate phosphoribosyltransferase pncB2 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PFJ30894_00863 yfkN; Trifunctional nucleotide phosphoesterase protein YfkN precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PFJ30894_02239 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PFJ30894_00963 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PFJ30894_00566 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PFJ30894_01478 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PFJ30894_01316 Dml; 2,3-dimethylmalate lyase K20454 dml; 2,3-dimethylmalate lyase [EC:4.1.3.32]
C 00770 Pantothenate and CoA biosynthesis [PATH:pfac00770]
D PFJ30894_00994 ilvG; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00410 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PFJ30894_00989 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PFJ30894_00990 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PFJ30894_01352 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PFJ30894_00484 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PFJ30894_00485 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PFJ30894_02367 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PFJ30894_01584 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PFJ30894_01257 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PFJ30894_02292 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PFJ30894_02269 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PFJ30894_01846 putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PFJ30894_00486 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pfac00780]
D PFJ30894_01270 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFJ30894_00355 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_01267 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_00846 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PFJ30894_02090 bioW; 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D PFJ30894_02087 bioK; L-Lysine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PFJ30894_02088 bioD1; ATP-dependent dethiobiotin synthetase BioD 1 K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PFJ30894_02091 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PFJ30894_00559 thiH_2; 2-iminoacetate synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PFJ30894_02369 birA_2; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PFJ30894_00494 birA_1; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:pfac00790]
D PFJ30894_01386 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PFJ30894_01388 sulD; Bifunctional folate synthesis protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PFJ30894_01387 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PFJ30894_00893 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PFJ30894_01610 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PFJ30894_01385 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PFJ30894_00189 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PFJ30894_01999 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PFJ30894_00404 Metallo-beta-lactamase superfamily protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:pfac00670]
D PFJ30894_00237 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PFJ30894_00236 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PFJ30894_00864 fchA; Methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D PFJ30894_00811 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PFJ30894_01058 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PFJ30894_02109 purH_2; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PFJ30894_01588 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PFJ30894_00364 arnA; Bifunctional polymyxin resistance protein ArnA K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PFJ30894_02328 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PFJ30894_01033 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D PFJ30894_02330 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PFJ30894_01363 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pfac00860]
D PFJ30894_00320 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PFJ30894_00528 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PFJ30894_00524 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PFJ30894_00525 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PFJ30894_00527 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PFJ30894_00526 nasF; Uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D PFJ30894_00529 sirC; Precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D PFJ30894_00513 cbiK; Sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PFJ30894_01760 cbiL; Cobalt-precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PFJ30894_01757 cbiH; Cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D PFJ30894_01759 cbiF; Cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PFJ30894_01758 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D PFJ30894_01756 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PFJ30894_01761 cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PFJ30894_01755 cbiT; putative cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PFJ30894_01748 cbiC; Cobalt-precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PFJ30894_01754 cobB; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PFJ30894_01785 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PFJ30894_01714 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PFJ30894_01644 btuR_1; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PFJ30894_01749 btuR_2; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PFJ30894_01750 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PFJ30894_01753 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PFJ30894_01782 Adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D PFJ30894_01712 cobP; Bifunctional adenosylcobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PFJ30894_01710 cobS; Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PFJ30894_01709 cobT_1; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PFJ30894_01711 cobT_2; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PFJ30894_01708 pspA; Phosphoserine phosphatase 1 K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D PFJ30894_01752 cobD; Threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D PFJ30894_01776 bchI_1; Magnesium-chelatase 38 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D PFJ30894_01777 bchI_2; Magnesium-chelatase 38 kDa subunit K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D PFJ30894_01606 pad1_2; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_00263 pad1_1; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_02155 pad1_3; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pfac00900]
D PFJ30894_01476 dxs_1; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PFJ30894_01558 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PFJ30894_01028 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PFJ30894_00794 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PFJ30894_01029 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PFJ30894_01560 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_01606 pad1_2; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_00263 pad1_1; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_02155 pad1_3; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_01642 fni; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PFJ30894_01475 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PFJ30894_01556 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
D PFJ30894_02307 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PFJ30894_01734 tkt_2; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_01735 dxs_2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PFJ30894_01487 tkt_1; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PFJ30894_01728 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures [PATH:pfac01054]
D PFJ30894_02184 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D PFJ30894_01728 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pfac00332]
D PFJ30894_00950 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PFJ30894_00951 proA_1; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pfac00261]
D PFJ30894_01692 lysC_1; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01840 lysC_2; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PFJ30894_01693 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PFJ30894_01691 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PFJ30894_01694 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D PFJ30894_01728 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D PFJ30894_01728 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pfac00401]
D PFJ30894_00972 tyrA; T-protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_00666 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFJ30894_01839 aspC_2; Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PFJ30894_02031 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PFJ30894_02030 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PFJ30894_01266 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PFJ30894_00355 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_01267 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PFJ30894_00357 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01268 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01541 acyl carrier protein K02078 acpP; acyl carrier protein
D PFJ30894_01542 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D PFJ30894_01585 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pfac00362]
D PFJ30894_00482 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PFJ30894_00157 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PFJ30894_00450 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PFJ30894_01831 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PFJ30894_00913 gcdB_1; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00917 gcdB_2; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00493 madB; Carboxybiotin decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00916 gcdC_2; Glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PFJ30894_00912 gcdC_1; Glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PFJ30894_00911 Oxaloacetate decarboxylase, gamma chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PFJ30894_00915 Oxaloacetate decarboxylase, gamma chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pfac00627]
D PFJ30894_00080 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PFJ30894_01597 bsdC_1; Phenolic acid decarboxylase subunit C K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D PFJ30894_01598 bsdD; Phenolic acid decarboxylase subunit D K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D PFJ30894_01606 pad1_2; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_00263 pad1_1; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_02155 pad1_3; putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PFJ30894_02157 bsdC_3; Phenolic acid decarboxylase subunit C K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D PFJ30894_01602 bsdC_2; Phenolic acid decarboxylase subunit C K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D PFJ30894_01607 hypothetical protein K22960 lpdD; gallate decarboxylase subunit D
D PFJ30894_01339 atoA; Acetate CoA-transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pfac00625]
D PFJ30894_02036 aldA; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PFJ30894_01790 nifH1_1; Nitrogenase iron protein 1 K02588 nifH; nitrogenase iron protein NifH
D PFJ30894_01861 nifH1_2; Nitrogenase iron protein 1 K02588 nifH; nitrogenase iron protein NifH
D PFJ30894_01789 nifD_1; Nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D PFJ30894_01307 dehH1; Haloacetate dehalogenase H-1 K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D PFJ30894_01307 dehH1; Haloacetate dehalogenase H-1 K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation
C 00622 Xylene degradation
D PFJ30894_00482 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pfac00643]
D PFJ30894_00080 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D PFJ30894_00482 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pfac03020]
D PFJ30894_01053 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PFJ30894_01054 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PFJ30894_01106 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PFJ30894_01583 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pfac03010]
D PFJ30894_01550 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PFJ30894_01086 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PFJ30894_01105 rpsD_2; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PFJ30894_00406 rpsD_1; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PFJ30894_01096 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PFJ30894_00409 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PFJ30894_01076 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PFJ30894_01093 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PFJ30894_01115 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PFJ30894_01079 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PFJ30894_01104 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PFJ30894_01075 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PFJ30894_01103 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PFJ30894_01575 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PFJ30894_01281 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PFJ30894_01089 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PFJ30894_00407 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PFJ30894_01084 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PFJ30894_01323 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PFJ30894_01336 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PFJ30894_01050 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PFJ30894_01083 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PFJ30894_01080 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PFJ30894_01081 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PFJ30894_01092 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PFJ30894_01094 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PFJ30894_01052 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PFJ30894_00313 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PFJ30894_01051 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PFJ30894_01049 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PFJ30894_01114 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PFJ30894_01090 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PFJ30894_01098 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PFJ30894_01087 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PFJ30894_01107 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PFJ30894_01095 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PFJ30894_01287 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PFJ30894_01165 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PFJ30894_00933 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PFJ30894_01085 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PFJ30894_01082 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PFJ30894_01091 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PFJ30894_00935 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PFJ30894_01617 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PFJ30894_01088 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PFJ30894_01097 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PFJ30894_00804 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PFJ30894_01262 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PFJ30894_01046 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D PFJ30894_00435 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PFJ30894_01164 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PFJ30894_01102 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PFJ30894_01074 rplGB; Ribosome-associated protein L7Ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D PFJ30894_00417 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PFJ30894_02006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pfac00970]
D PFJ30894_02004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_00616 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_00675 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_02078 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_01507 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_02241 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_02173 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_02175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_01747 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PFJ30894_02252 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PFJ30894_00393 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFJ30894_01852 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFJ30894_01888 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFJ30894_01849 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PFJ30894_00104 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PFJ30894_02160 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PFJ30894_00391 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFJ30894_02251 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFJ30894_02159 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFJ30894_00867 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_01850 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_01889 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_00270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_01506 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_00105 tRNA-His K14226 tRNA-His; tRNA His
D PFJ30894_02005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PFJ30894_02079 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PFJ30894_01848 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_00102 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_01956 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_02290 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_02289 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_00103 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFJ30894_00308 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFJ30894_00390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFJ30894_01042 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFJ30894_01044 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFJ30894_01349 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFJ30894_00394 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PFJ30894_01851 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PFJ30894_01650 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFJ30894_01192 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFJ30894_01505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFJ30894_00083 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFJ30894_00179 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFJ30894_02336 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFJ30894_01040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFJ30894_00651 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFJ30894_01043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFJ30894_01890 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PFJ30894_00392 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFJ30894_02250 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFJ30894_01445 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFJ30894_00320 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PFJ30894_01030 gltX_2; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFJ30894_01845 gltX2; Glutamate--tRNA ligase 2 K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFJ30894_00197 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PFJ30894_00196 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PFJ30894_00198 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PFJ30894_00217 alaS_1; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFJ30894_01458 alaS_2; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFJ30894_01813 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFJ30894_01904 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PFJ30894_01903 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PFJ30894_01161 thrZ; Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PFJ30894_00388 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PFJ30894_01031 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PFJ30894_00380 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PFJ30894_01588 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PFJ30894_00364 arnA; Bifunctional polymyxin resistance protein ArnA K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PFJ30894_00892 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PFJ30894_01138 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFJ30894_01426 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PFJ30894_02362 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PFJ30894_00005 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFJ30894_01561 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PFJ30894_01814 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PFJ30894_01171 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PFJ30894_01172 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PFJ30894_01189 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFJ30894_01634 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pfac03060]
D PFJ30894_01099 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFJ30894_01047 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFJ30894_01993 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFJ30894_01364 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PFJ30894_01365 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PFJ30894_01362 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFJ30894_00437 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFJ30894_02137 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFJ30894_01280 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PFJ30894_01278 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PFJ30894_01300 sipT; Signal peptidase I T K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PFJ30894_02106 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pfac04122]
D PFJ30894_00343 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFJ30894_00347 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PFJ30894_00303 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D PFJ30894_00304 tcdA_1; tRNA threonylcarbamoyladenosine dehydratase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pfac03018]
D PFJ30894_01994 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFJ30894_01700 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PFJ30894_01989 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PFJ30894_01673 cshA_1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFJ30894_01847 cshA_2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFJ30894_01313 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFJ30894_01615 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PFJ30894_01680 rnjA; Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PFJ30894_01329 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PFJ30894_02258 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFJ30894_01722 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PFJ30894_00029 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pfac03030]
D PFJ30894_01370 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFJ30894_01563 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PFJ30894_00178 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFJ30894_00384 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFJ30894_01141 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFJ30894_00433 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFJ30894_00312 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PFJ30894_01347 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PFJ30894_00408 ssb; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00711 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D PFJ30894_01302 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PFJ30894_01524 rnhC; Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D PFJ30894_00201 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pfac03410]
D PFJ30894_01312 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PFJ30894_02293 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PFJ30894_01887 alkA_2; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PFJ30894_00653 alkA_1; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PFJ30894_02275 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PFJ30894_02098 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PFJ30894_01392 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PFJ30894_01820 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFJ30894_00201 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pfac03420]
D PFJ30894_02378 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PFJ30894_02096 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D PFJ30894_02097 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D PFJ30894_02095 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PFJ30894_00202 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFJ30894_02277 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFJ30894_00201 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pfac03430]
D PFJ30894_01726 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PFJ30894_01841 mutS2; Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D PFJ30894_01725 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PFJ30894_00202 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFJ30894_02277 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFJ30894_01473 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PFJ30894_01474 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PFJ30894_01820 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFJ30894_00408 ssb; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00711 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D PFJ30894_01370 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFJ30894_01563 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PFJ30894_00433 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFJ30894_00178 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFJ30894_01141 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFJ30894_00384 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFJ30894_00201 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pfac03440]
D PFJ30894_01820 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFJ30894_00408 ssb; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00711 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00431 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PFJ30894_01905 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PFJ30894_00176 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D PFJ30894_01613 recombinase A K03553 recA; recombination protein RecA
D PFJ30894_01356 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PFJ30894_01357 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PFJ30894_01355 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PFJ30894_01618 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PFJ30894_02145 recD2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PFJ30894_01370 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFJ30894_01563 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PFJ30894_00433 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFJ30894_00178 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFJ30894_01141 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFJ30894_00384 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFJ30894_01586 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pfac02010]
D PFJ30894_02044 ssuA_2; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein
D PFJ30894_02042 ssuC_2; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D PFJ30894_02043 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PFJ30894_01676 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_00518 fbpA; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_00522 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_02151 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_00519 potH; Putrescine transport system permease protein PotH K02011 afuB; iron(III) transport system permease protein
D PFJ30894_02149 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D PFJ30894_00520 sugC; Trehalose import ATP-binding protein SugC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PFJ30894_02150 potA_2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PFJ30894_01006 potD_1; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PFJ30894_01007 potD_2; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PFJ30894_01008 ydcV; Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D PFJ30894_01009 potB; Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D PFJ30894_01010 potA_1; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PFJ30894_00088 glycine betaine transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PFJ30894_00087 opuAB; Glycine betaine transport system permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D PFJ30894_00086 gbuA; Glycine betaine/carnitine transport ATP-binding protein GbuA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PFJ30894_01984 opuBC; Choline-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D PFJ30894_01983 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PFJ30894_00833 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PFJ30894_00831 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PFJ30894_00832 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PFJ30894_00287 Purine-binding protein precursor K07335 bmpA; basic membrane protein A and related proteins
D PFJ30894_00119 beta-methylgalactoside transporter inner membrane component K23535 nupB; general nucleoside transport system permease protein
D PFJ30894_00118 Branched-chain amino acid transport system permease component K23536 nupC; general nucleoside transport system permease protein
D PFJ30894_00120 rbsA_1; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D PFJ30894_01295 rbsB; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D PFJ30894_01296 rbsC; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D PFJ30894_01297 rbsA_2; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PFJ30894_01298 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PFJ30894_01405 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PFJ30894_01406 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PFJ30894_01407 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PFJ30894_01408 malK; Maltose/maltodextrin import ATP-binding protein MalK K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PFJ30894_01149 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D PFJ30894_01150 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PFJ30894_01151 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PFJ30894_01152 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PFJ30894_00334 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D PFJ30894_00331 phnE_1; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PFJ30894_00332 phnE_2; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PFJ30894_00333 metN_1; Methionine import ATP-binding protein MetN K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PFJ30894_02141 glnH_1; Glutamine-binding periplasmic protein precursor K10036 glnH; glutamine transport system substrate-binding protein
D PFJ30894_02142 glnH_2; Glutamine-binding periplasmic protein precursor K10036 glnH; glutamine transport system substrate-binding protein
D PFJ30894_02140 glnP; Glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein
D PFJ30894_02139 glnQ_3; Glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PFJ30894_01062 artJ; ABC transporter arginine-binding protein 1 precursor K17073 lysX1; putative lysine transport system substrate-binding protein
D PFJ30894_01063 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K17074 lysX2; putative lysine transport system permease protein
D PFJ30894_01064 glnQ_2; Glutamine transport ATP-binding protein GlnQ K17076 lysY; putative lysine transport system ATP-binding protein
D PFJ30894_02327 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_00459 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_00460 braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_01368 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_02326 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PFJ30894_00461 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PFJ30894_00462 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D PFJ30894_02325 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PFJ30894_00463 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02324 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_00464 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02323 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02227 metQ_2; Methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D PFJ30894_00659 metQ_1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D PFJ30894_00660 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D PFJ30894_00661 metN_2; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D PFJ30894_00568 znuA; High-affinity zinc uptake system binding-protein ZnuA precursor K09815 znuA; zinc transport system substrate-binding protein
D PFJ30894_00570 znuB; High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D PFJ30894_00569 znuC; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PFJ30894_02368 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PFJ30894_01769 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D PFJ30894_01112 ecfT_2; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D PFJ30894_00621 ecfT_1; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D PFJ30894_01110 ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_00619 ykoD_1; Putative HMP/thiamine import ATP-binding protein YkoD K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_01111 ecfA2_2; Energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_00620 ecfA2_1; Energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_01533 kpsM; Polysialic acid transport protein KpsM K09690 wzm; homopolymeric O-antigen transport system permease protein
D PFJ30894_01534 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PFJ30894_00860 lptF; Lipopolysaccharide export system permease protein LptF K11720 lptG; lipopolysaccharide export system permease protein
D PFJ30894_00859 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PFJ30894_02132 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PFJ30894_02133 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PFJ30894_00850 Putative multidrug export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PFJ30894_01021 yddA; Inner membrane ABC transporter ATP-binding protein YddA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pfac03070]
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PFJ30894_01377 pulG_2; Type II secretion system protein G precursor K02456 gspG; general secretion pathway protein G
D PFJ30894_01496 pulG_3; Type II secretion system protein G precursor K02456 gspG; general secretion pathway protein G
D PFJ30894_01364 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PFJ30894_01365 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PFJ30894_01047 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFJ30894_01993 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFJ30894_01099 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFJ30894_01362 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFJ30894_00437 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFJ30894_02137 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFJ30894_01278 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PFJ30894_01280 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pfac02020]
D PFJ30894_01155 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFJ30894_01154 phoB; Phosphate regulon transcriptional regulatory protein PhoB K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PFJ30894_00629 srrA_1; Transcriptional regulatory protein SrrA K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PFJ30894_01149 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D PFJ30894_00160 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D PFJ30894_00399 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PFJ30894_00398 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PFJ30894_00402 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PFJ30894_00401 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PFJ30894_00400 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PFJ30894_02017 srrA_2; Transcriptional regulatory protein SrrA K07775 resD; two-component system, OmpR family, response regulator ResD
D PFJ30894_00434 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PFJ30894_02013 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PFJ30894_02305 citD; Citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D PFJ30894_02304 citE; Citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D PFJ30894_02303 citF; Citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D PFJ30894_00506 citG; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D PFJ30894_01486 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PFJ30894_01653 dcuS; Sensor histidine kinase DcuS K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PFJ30894_01654 dcuR; Transcriptional regulatory protein DcuR K11615 malR; two-component system, CitB family, response regulator MalR
D PFJ30894_02230 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PFJ30894_01142 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00577 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_01339 atoA; Acetate CoA-transferase subunit beta K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PFJ30894_01341 atoE; Short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_01318 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PFJ30894_01319 siaT_1; Sialic acid TRAP transporter permease protein SiaT K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PFJ30894_00370 kpsD; Polysialic acid transport protein KpsD precursor K01991 wza; polysaccharide biosynthesis/export protein
D PFJ30894_01186 yfkJ; Low molecular weight protein-tyrosine-phosphatase YfkJ K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PFJ30894_00815 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PFJ30894_00387 ldc; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pfac02024]
D PFJ30894_01722 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PFJ30894_02031 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PFJ30894_02030 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PFJ30894_00398 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PFJ30894_00534 lsrF; putative aldolase LsrF K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D PFJ30894_02327 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_00459 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_00460 braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_01368 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_02326 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PFJ30894_00461 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PFJ30894_00462 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D PFJ30894_02325 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PFJ30894_00463 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02324 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_00464 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02323 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_00130 lcfB; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFJ30894_01608 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PFJ30894_02352 ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PFJ30894_00883 nikA; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PFJ30894_00222 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PFJ30894_00881 gsiC_2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PFJ30894_00223 gsiC_1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PFJ30894_02350 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PFJ30894_02351 gsiD_3; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PFJ30894_00882 gsiD_2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PFJ30894_00224 gsiD_1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PFJ30894_02353 oppD_3; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PFJ30894_00225 oppD_1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PFJ30894_00884 oppD_2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PFJ30894_02354 gsiA_2; Glutathione import ATP-binding protein GsiA K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PFJ30894_00885 oppF; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PFJ30894_00437 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PFJ30894_01047 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFJ30894_01993 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFJ30894_01099 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFJ30894_01362 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFJ30894_02137 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFJ30894_01278 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PFJ30894_01280 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D PFJ30894_01295 rbsB; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D PFJ30894_01348 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PFJ30894_01994 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pfac04980]
D PFJ30894_01714 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PFJ30894_00876 putative GTPase/MT1543 K07588 MMAA; GTPase [EC:3.6.5.-]
D PFJ30894_00908 argK; putative GTPase ArgK K07588 MMAA; GTPase [EC:3.6.5.-]
D PFJ30894_00874 scpA_3; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_00875 mutB_1; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PFJ30894_02328 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pfac01501]
D PFJ30894_00422 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PFJ30894_01019 bepF; Efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_01520 mdtA; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PFJ30894_01810 pbpF_1; Penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFJ30894_00928 spoVD_2; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pfac01502]
D PFJ30894_02013 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PFJ30894_02053 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFJ30894_00191 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PFJ30894_02058 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PFJ30894_02057 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PFJ30894_02055 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pfac01503]
D PFJ30894_01876 lytC_1; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_01925 lytC_2; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_02267 lytC_3; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_00160 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D PFJ30894_01019 bepF; Efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_01520 mdtA; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PFJ30894_00847 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pfac01000]
C 01001 Protein kinases [BR:pfac01001]
D PFJ30894_01593 prkC; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PFJ30894_00896 rsbT; Serine/threonine-protein kinase RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D PFJ30894_00368 ywqD; Tyrosine-protein kinase YwqD K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PFJ30894_01155 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFJ30894_00399 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PFJ30894_01653 dcuS; Sensor histidine kinase DcuS K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PFJ30894_02261 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D PFJ30894_00589 rcsC; Sensor histidine kinase RcsC K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D PFJ30894_00765 barA_1; Signal transduction histidine-protein kinase BarA K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D PFJ30894_02331 barA_3; Signal transduction histidine-protein kinase BarA K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pfac01009]
D PFJ30894_01662 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PFJ30894_01592 stp; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:pfac01002]
D PFJ30894_02106 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PFJ30894_01516 comC; Type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PFJ30894_00509 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PFJ30894_02257 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PFJ30894_00244 pgdS_1; Gamma-DL-glutamyl hydrolase precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PFJ30894_02018 lytF; Peptidoglycan endopeptidase LytF precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PFJ30894_01056 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PFJ30894_02215 gltB_2; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PFJ30894_02115 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PFJ30894_02008 pepF1; Oligoendopeptidase F, plasmid K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PFJ30894_02013 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PFJ30894_01702 Peptidase M16C associated K06972 PITRM1; presequence protease [EC:3.4.24.-]
D PFJ30894_01688 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PFJ30894_00511 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PFJ30894_00553 cpg2_1; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PFJ30894_00554 cpg2_2; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PFJ30894_02282 cpg2_3; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PFJ30894_00032 pepT_1; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PFJ30894_02023 pepT_4; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PFJ30894_01390 pepT_2; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PFJ30894_01457 pepT_3; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PFJ30894_02153 succinyl-diaminopimelate desuccinylase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PFJ30894_02071 iaaH; Indole-3-acetyl-aspartic acid hydrolase K12940 abgA; aminobenzoyl-glutamate utilization protein A
D PFJ30894_00280 yxeP; putative hydrolase YxeP K14665 amhX; amidohydrolase [EC:3.5.1.-]
D PFJ30894_00547 allC; Allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D PFJ30894_00213 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PFJ30894_01466 pepQ_2; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PFJ30894_00396 iadA; Isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D PFJ30894_02370 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PFJ30894_00787 ftsH4; ATP-dependent zinc metalloprotease FtsH 4 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PFJ30894_01717 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PFJ30894_01559 rasP; Regulator of sigma-W protease RasP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PFJ30894_00160 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D PFJ30894_00869 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PFJ30894_01221 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PFJ30894_00871 lon1; Lon protease 1 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PFJ30894_01670 lexA_3; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PFJ30894_00679 lexA_1; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PFJ30894_01195 lexA_2; LexA repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PFJ30894_01300 sipT; Signal peptidase I T K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PFJ30894_02130 putative CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PFJ30894_00003 sppA; Putative signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D PFJ30894_01842 yhbU_2; putative protease YhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PFJ30894_01464 yhbU_1; putative protease YhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:pfac01003]
D PFJ30894_01624 ugtP; Processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PFJ30894_01738 Glycosyltransferase family 10 K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152]
D PFJ30894_01810 pbpF_1; Penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFJ30894_01655 tagA; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PFJ30894_00814 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PFJ30894_01741 cotSA; Spore coat protein SA K15914 pglA; N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase [EC:2.4.1.290]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pfac01005]
D PFJ30894_00847 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PFJ30894_00849 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PFJ30894_00845 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PFJ30894_00843 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PFJ30894_00848 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PFJ30894_00856 Phosphatidylinositol mannoside acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PFJ30894_00421 yeiU; Inner membrane protein YeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D PFJ30894_00851 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PFJ30894_00853 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PFJ30894_00852 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PFJ30894_00855 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PFJ30894_00854 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PFJ30894_00056 rfaC; Lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PFJ30894_00055 rfaQ; Lipopolysaccharide core heptosyltransferase RfaQ K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PFJ30894_00051 cptA_1; Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PFJ30894_00457 cptA_2; Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PFJ30894_00060 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PFJ30894_00057 gmhB; D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PFJ30894_00059 hldE; Bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PFJ30894_00058 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PFJ30894_02019 hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PFJ30894_00814 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pfac01011]
D PFJ30894_00826 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PFJ30894_02011 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PFJ30894_02054 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PFJ30894_02056 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PFJ30894_02059 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PFJ30894_02053 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PFJ30894_00191 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PFJ30894_00633 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3]
D PFJ30894_02057 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PFJ30894_02055 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PFJ30894_01039 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PFJ30894_01810 pbpF_1; Penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PFJ30894_00928 spoVD_2; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PFJ30894_00238 spoVD_1; Stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D PFJ30894_02013 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PFJ30894_00244 pgdS_1; Gamma-DL-glutamyl hydrolase precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PFJ30894_02018 lytF; Peptidoglycan endopeptidase LytF precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PFJ30894_02291 slt; Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PFJ30894_01463 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PFJ30894_01359 lytB; Amidase enhancer precursor K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D PFJ30894_01876 lytC_1; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_01925 lytC_2; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_02267 lytC_3; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pfac01004]
D PFJ30894_01266 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PFJ30894_00358 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_00360 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01265 fabHA; 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01537 fabH_3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01538 fabH_4; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PFJ30894_01270 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PFJ30894_00355 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_01267 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PFJ30894_00846 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PFJ30894_01353 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D PFJ30894_00948 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PFJ30894_00130 lcfB; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFJ30894_01264 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PFJ30894_01646 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PFJ30894_01640 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pfac01008]
D PFJ30894_02184 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pfac01006]
D PFJ30894_01475 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PFJ30894_01556 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PFJ30894_01723 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:pfac01007]
D PFJ30894_00320 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PFJ30894_01030 gltX_2; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFJ30894_01845 gltX2; Glutamate--tRNA ligase 2 K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFJ30894_01189 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFJ30894_01634 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PFJ30894_01031 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PFJ30894_00005 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFJ30894_00380 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PFJ30894_01426 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PFJ30894_00892 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PFJ30894_01138 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFJ30894_02362 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PFJ30894_01813 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFJ30894_01814 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PFJ30894_01904 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PFJ30894_01903 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PFJ30894_00388 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PFJ30894_01561 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PFJ30894_01161 thrZ; Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PFJ30894_00217 alaS_1; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFJ30894_01458 alaS_2; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFJ30894_01171 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PFJ30894_01172 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PFJ30894_01276 aspC_1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01510 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PFJ30894_01839 aspC_2; Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PFJ30894_02357 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PFJ30894_01549 patA_1; Putative N-acetyl-LL-diaminopimelate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D PFJ30894_00666 hisC2; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PFJ30894_02123 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PFJ30894_01719 patA_2; Putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D PFJ30894_02087 bioK; L-Lysine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PFJ30894_00524 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PFJ30894_01958 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PFJ30894_02192 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PFJ30894_01731 fdtB; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pfac00194]
D PFJ30894_00823 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PFJ30894_00822 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PFJ30894_00821 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PFJ30894_00820 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PFJ30894_00819 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PFJ30894_00818 atpE; ATP synthase subunit c, sodium ion specific K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PFJ30894_00817 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pfac03000]
D PFJ30894_00653 alkA_1; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PFJ30894_01807 cysL_1; HTH-type transcriptional regulator CysL K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PFJ30894_01343 ccpN; Transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D PFJ30894_00302 gabR; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PFJ30894_00983 rutR; HTH-type transcriptional regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator
D PFJ30894_01159 lrp; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PFJ30894_00205 liaR; Transcriptional regulatory protein LiaR K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PFJ30894_02335 DNA-binding transcriptional repressor MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PFJ30894_00098 adhR_1; HTH-type transcriptional regulator AdhR K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D PFJ30894_00156 adhR_2; HTH-type transcriptional regulator AdhR K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D PFJ30894_00282 adhR_3; HTH-type transcriptional regulator AdhR K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D PFJ30894_00567 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PFJ30894_00163 perR_1; Transcriptional regulator PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PFJ30894_02064 perR_2; Peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PFJ30894_00649 iron-responsive transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PFJ30894_00344 cymR; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D PFJ30894_00299 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D PFJ30894_00515 mntR; Transcriptional regulator MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PFJ30894_02369 birA_2; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PFJ30894_00494 birA_1; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PFJ30894_00550 Sugar-specific transcriptional regulator TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PFJ30894_00797 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D PFJ30894_01630 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D PFJ30894_01294 xre_2; HTH-type transcriptional regulator Xre K07729 K07729; putative transcriptional regulator
D PFJ30894_01342 pucR; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D PFJ30894_00124 cdaR; Carbohydrate diacid regulator K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D PFJ30894_00442 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFJ30894_00454 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFJ30894_01026 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PFJ30894_01479 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PFJ30894_01327 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PFJ30894_01023 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D PFJ30894_01998 cggR; Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D PFJ30894_02104 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PFJ30894_02048 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D PFJ30894_02062 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pfac03021]
D PFJ30894_01106 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PFJ30894_01053 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PFJ30894_01054 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PFJ30894_01583 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PFJ30894_01348 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D PFJ30894_01036 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D PFJ30894_01567 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D PFJ30894_01471 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D PFJ30894_01048 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D PFJ30894_00896 rsbT; Serine/threonine-protein kinase RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D PFJ30894_02363 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:pfac03019]
D PFJ30894_00932 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PFJ30894_01271 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PFJ30894_01680 rnjA; Ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PFJ30894_01615 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PFJ30894_01989 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PFJ30894_02020 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D PFJ30894_01673 cshA_1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFJ30894_01847 cshA_2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFJ30894_01313 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFJ30894_01994 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFJ30894_01700 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PFJ30894_01329 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PFJ30894_02258 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFJ30894_01722 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PFJ30894_00029 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PFJ30894_02086 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome [BR:pfac03041]
C 03011 Ribosome [BR:pfac03011]
D PFJ30894_01550 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PFJ30894_01086 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PFJ30894_01105 rpsD_2; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PFJ30894_00406 rpsD_1; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PFJ30894_01096 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PFJ30894_00409 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PFJ30894_01076 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PFJ30894_01093 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PFJ30894_01115 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PFJ30894_01079 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PFJ30894_01104 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PFJ30894_01075 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PFJ30894_01103 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PFJ30894_01575 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PFJ30894_01281 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PFJ30894_01089 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PFJ30894_00407 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PFJ30894_01084 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PFJ30894_01323 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PFJ30894_01336 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PFJ30894_01050 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PFJ30894_01083 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PFJ30894_01080 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PFJ30894_01081 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PFJ30894_01092 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PFJ30894_01094 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PFJ30894_00313 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PFJ30894_01051 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PFJ30894_01049 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PFJ30894_01052 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PFJ30894_01114 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PFJ30894_01090 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PFJ30894_01098 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PFJ30894_01087 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PFJ30894_01107 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PFJ30894_01095 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PFJ30894_01287 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PFJ30894_01165 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PFJ30894_00933 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PFJ30894_01085 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PFJ30894_01082 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PFJ30894_01091 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PFJ30894_00935 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PFJ30894_01617 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PFJ30894_01088 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PFJ30894_01097 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PFJ30894_00804 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PFJ30894_01262 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PFJ30894_01046 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D PFJ30894_00435 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PFJ30894_01164 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PFJ30894_01102 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PFJ30894_01074 rplGB; Ribosome-associated protein L7Ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D PFJ30894_00417 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PFJ30894_02006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pfac03009]
D PFJ30894_01271 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PFJ30894_01907 era_2; GTPase Era K03595 era; GTPase
D PFJ30894_00949 obg; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PFJ30894_01567 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D PFJ30894_01471 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D PFJ30894_01048 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D PFJ30894_00376 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PFJ30894_01590 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PFJ30894_01256 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PFJ30894_01332 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PFJ30894_00441 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PFJ30894_02061 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PFJ30894_00381 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PFJ30894_01724 rsmJ; Ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PFJ30894_01477 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PFJ30894_01034 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PFJ30894_00159 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PFJ30894_02218 rlmI; Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PFJ30894_01591 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PFJ30894_01395 rlmCD; 23S rRNA (uracil-C(5))-methyltransferase RlmCD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PFJ30894_01637 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PFJ30894_01795 rluD_1; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PFJ30894_02105 rluD_2; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PFJ30894_02263 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PFJ30894_01284 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PFJ30894_01675 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PFJ30894_01331 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PFJ30894_00932 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PFJ30894_01460 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PFJ30894_01032 mrnC; Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D PFJ30894_01673 cshA_1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFJ30894_01847 cshA_2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PFJ30894_01594 rsgA_2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PFJ30894_00995 rsgA_1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PFJ30894_01645 der; GTPase Der K03977 engA; GTPase
D PFJ30894_01301 rbgA; Ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D PFJ30894_01672 hflX; GTPase HflX K03665 hflX; GTPase
D PFJ30894_00808 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PFJ30894_01819 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PFJ30894_01571 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PFJ30894_01566 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D PFJ30894_00432 ribosome-associated protein K14761 rlbA; ribosome-associated protein
D PFJ30894_00966 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D PFJ30894_01909 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D PFJ30894_02138 Ribosome-associated factor Y K05808 hpf; ribosome hibernation promoting factor
D PFJ30894_00476 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D PFJ30894_01261 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pfac03016]
D PFJ30894_00320 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PFJ30894_01561 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PFJ30894_01426 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PFJ30894_01138 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFJ30894_00380 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PFJ30894_00005 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFJ30894_02362 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PFJ30894_01813 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFJ30894_00217 alaS_1; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFJ30894_01458 alaS_2; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PFJ30894_01161 thrZ; Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PFJ30894_00388 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PFJ30894_01031 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PFJ30894_00892 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PFJ30894_01814 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PFJ30894_01171 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PFJ30894_01172 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PFJ30894_01189 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFJ30894_01634 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PFJ30894_01818 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PFJ30894_01335 hinT; HIT-like protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PFJ30894_00240 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PFJ30894_01113 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PFJ30894_01573 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PFJ30894_00343 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFJ30894_00808 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PFJ30894_01723 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PFJ30894_00439 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PFJ30894_00440 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PFJ30894_00436 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PFJ30894_01904 glyQ; Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PFJ30894_01903 glyS; Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PFJ30894_01030 gltX_2; Glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFJ30894_01845 gltX2; Glutamate--tRNA ligase 2 K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PFJ30894_01823 ybaK_2; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PFJ30894_02337 tadA_2; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PFJ30894_02366 dusC; tRNA-dihydrouridine synthase C K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PFJ30894_01727 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PFJ30894_01333 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PFJ30894_01627 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PFJ30894_01285 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PFJ30894_02022 trmK; tRNA (adenine(22)-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D PFJ30894_01384 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PFJ30894_01170 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PFJ30894_00347 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PFJ30894_00207 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PFJ30894_01360 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PFJ30894_00189 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PFJ30894_01385 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PFJ30894_01999 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PFJ30894_01358 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D PFJ30894_01361 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PFJ30894_02372 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PFJ30894_02264 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PFJ30894_02262 tsaD_2; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PFJ30894_02265 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PFJ30894_01812 tcdA_2; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PFJ30894_01259 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D PFJ30894_01989 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PFJ30894_01700 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pfac03012]
D PFJ30894_01570 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PFJ30894_01163 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PFJ30894_02338 yheS_3; putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PFJ30894_01551 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D PFJ30894_01045 tufA_1; Elongation factor Tu K02358 tuf; elongation factor Tu
D PFJ30894_01078 tufA_2; Elongation factor Tu K02358 tuf; elongation factor Tu
D PFJ30894_01077 fusA_1; Elongation factor G K02355 fusA; elongation factor G
D PFJ30894_01485 fusA_2; Elongation factor G K02355 fusA; elongation factor G
D PFJ30894_00806 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PFJ30894_01553 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D PFJ30894_00807 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PFJ30894_00802 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PFJ30894_01101 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PFJ30894_01467 efp; Elongation factor P K02356 efp; elongation factor P
D PFJ30894_02136 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PFJ30894_01652 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:pfac03110]
D PFJ30894_02312 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PFJ30894_01024 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PFJ30894_00870 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PFJ30894_01329 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PFJ30894_02258 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFJ30894_01330 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PFJ30894_01612 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D PFJ30894_01328 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PFJ30894_02259 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D PFJ30894_00160 htrA; Serine protease Do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D PFJ30894_02370 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PFJ30894_00787 ftsH4; ATP-dependent zinc metalloprotease FtsH 4 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PFJ30894_00817 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PFJ30894_00077 trxA; Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pfac04131]
D PFJ30894_01715 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PFJ30894_01997 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFJ30894_01374 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:pfac03032]
D PFJ30894_02375 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PFJ30894_00434 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PFJ30894_00312 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PFJ30894_01347 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PFJ30894_00408 ssb; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00711 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D PFJ30894_01370 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFJ30894_01563 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PFJ30894_00433 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFJ30894_01141 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFJ30894_00384 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFJ30894_00178 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFJ30894_01302 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PFJ30894_01524 rnhC; Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D PFJ30894_00201 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PFJ30894_00424 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PFJ30894_00428 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PFJ30894_01626 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pfac03036]
D PFJ30894_01271 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PFJ30894_02375 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PFJ30894_00434 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PFJ30894_00628 dps; General stress protein 20U K04047 dps; starvation-inducible DNA-binding protein
D PFJ30894_01722 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PFJ30894_01159 lrp; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PFJ30894_01277 smc_2; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D PFJ30894_01635 scpA_5; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D PFJ30894_01636 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D PFJ30894_02374 cell division protein FtsB K13052 divIC; cell division protein DivIC
D PFJ30894_02133 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PFJ30894_01679 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PFJ30894_02060 ftsL; Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PFJ30894_02052 divIB; Cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D PFJ30894_00239 ftsW; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D PFJ30894_02132 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PFJ30894_02049 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PFJ30894_01843 zapA; Cell division protein ZapA K09888 zapA; cell division protein ZapA
D PFJ30894_01876 lytC_1; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_01925 lytC_2; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_02267 lytC_3; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PFJ30894_01019 bepF; Efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_01520 mdtA; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_01424 divIVA; Septum site-determining protein DivIVA K04074 divIVA; cell division initiation protein
D PFJ30894_01321 sepF_1; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D PFJ30894_01421 sepF_2; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D PFJ30894_00827 mreB_1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PFJ30894_00925 mreB_2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PFJ30894_00926 mreC; Cell shape-determining protein MreC precursor K03570 mreC; rod shape-determining protein MreC
D PFJ30894_00927 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PFJ30894_00929 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PFJ30894_00453 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D PFJ30894_00442 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFJ30894_00454 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFJ30894_00440 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PFJ30894_00441 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PFJ30894_01627 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PFJ30894_01629 xerC_3; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PFJ30894_01721 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PFJ30894_01246 xerC_1; Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D PFJ30894_02376 mazG; Nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D PFJ30894_01953 Adenosine monophosphate-protein transferase SoFic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PFJ30894_00872 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D PFJ30894_02084 whiA; Sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pfac03400]
D PFJ30894_00654 ogt_1; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PFJ30894_01312 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PFJ30894_00203 mutT; 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PFJ30894_01699 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PFJ30894_02275 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PFJ30894_01887 alkA_2; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PFJ30894_00653 alkA_1; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PFJ30894_02293 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PFJ30894_02098 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PFJ30894_01392 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PFJ30894_01820 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PFJ30894_00201 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PFJ30894_02096 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D PFJ30894_02097 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D PFJ30894_02095 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PFJ30894_00202 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFJ30894_02277 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PFJ30894_01053 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PFJ30894_01054 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PFJ30894_01106 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PFJ30894_01583 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PFJ30894_02378 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PFJ30894_01726 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PFJ30894_01841 mutS2; Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D PFJ30894_01725 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PFJ30894_01473 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PFJ30894_01474 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PFJ30894_01370 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PFJ30894_01563 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PFJ30894_00433 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PFJ30894_01141 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PFJ30894_00384 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PFJ30894_00178 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PFJ30894_00408 ssb; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00711 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D PFJ30894_02145 recD2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PFJ30894_01613 recombinase A K03553 recA; recombination protein RecA
D PFJ30894_01356 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PFJ30894_01357 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PFJ30894_01355 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PFJ30894_01586 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PFJ30894_00487 sbcC; Nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D PFJ30894_00488 sbcD; Nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D PFJ30894_01025 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D PFJ30894_00431 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PFJ30894_01618 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PFJ30894_01905 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PFJ30894_00176 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D PFJ30894_01480 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PFJ30894_01404 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PFJ30894_01403 addB; ATP-dependent helicase/deoxyribonuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PFJ30894_01183 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PFJ30894_00147 AAA-like domain protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PFJ30894_00424 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PFJ30894_00428 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PFJ30894_01626 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PFJ30894_02375 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PFJ30894_01313 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PFJ30894_02037 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PFJ30894_01195 lexA_2; LexA repressor K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PFJ30894_01670 lexA_3; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PFJ30894_00679 lexA_1; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PFJ30894_01614 recombination regulator RecX K03565 recX; regulatory protein
D PFJ30894_01572 nrnA_2; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:pfac03029]
D PFJ30894_01570 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PFJ30894_01163 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PFJ30894_01551 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D PFJ30894_01045 tufA_1; Elongation factor Tu K02358 tuf; elongation factor Tu
D PFJ30894_01078 tufA_2; Elongation factor Tu K02358 tuf; elongation factor Tu
D PFJ30894_01077 fusA_1; Elongation factor G K02355 fusA; elongation factor G
D PFJ30894_01485 fusA_2; Elongation factor G K02355 fusA; elongation factor G
D PFJ30894_01907 era_2; GTPase Era K03595 era; GTPase
D PFJ30894_01189 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PFJ30894_01138 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PFJ30894_01813 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PFJ30894_00005 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PFJ30894_00197 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PFJ30894_00196 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PFJ30894_00198 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PFJ30894_00408 ssb; Single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00711 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D PFJ30894_00838 bamA; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family
D PFJ30894_01329 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PFJ30894_01328 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PFJ30894_02258 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFJ30894_02259 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D PFJ30894_01330 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PFJ30894_00343 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PFJ30894_00437 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pfac02000]
D PFJ30894_00850 Putative multidrug export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PFJ30894_01767 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PFJ30894_00521 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PFJ30894_01021 yddA; Inner membrane ABC transporter ATP-binding protein YddA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PFJ30894_00144 putative ABC transporter ATP-binding protein/MT2552 K15738 uup; ABC transport system ATP-binding/permease protein
D PFJ30894_02044 ssuA_2; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein
D PFJ30894_02042 ssuC_2; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D PFJ30894_02043 ssuB; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PFJ30894_01676 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_00518 fbpA; Iron-utilization periplasmic protein precursor K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_00522 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_02151 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D PFJ30894_00519 potH; Putrescine transport system permease protein PotH K02011 afuB; iron(III) transport system permease protein
D PFJ30894_02149 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D PFJ30894_00520 sugC; Trehalose import ATP-binding protein SugC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PFJ30894_02150 potA_2; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PFJ30894_01006 potD_1; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PFJ30894_01007 potD_2; Spermidine/putrescine-binding periplasmic protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PFJ30894_01008 ydcV; Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D PFJ30894_01009 potB; Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D PFJ30894_01010 potA_1; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PFJ30894_00088 glycine betaine transporter periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PFJ30894_00087 opuAB; Glycine betaine transport system permease protein OpuAB K02001 proW; glycine betaine/proline transport system permease protein
D PFJ30894_00086 gbuA; Glycine betaine/carnitine transport ATP-binding protein GbuA K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PFJ30894_01984 opuBC; Choline-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D PFJ30894_01983 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PFJ30894_01017 ssuA_1; Putative aliphatic sulfonates-binding protein precursor K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PFJ30894_01016 tauB; Taurine import ATP-binding protein TauB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PFJ30894_01295 rbsB; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D PFJ30894_01296 rbsC; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D PFJ30894_01297 rbsA_2; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PFJ30894_01405 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PFJ30894_01406 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PFJ30894_01407 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PFJ30894_01408 malK; Maltose/maltodextrin import ATP-binding protein MalK K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PFJ30894_00287 Purine-binding protein precursor K07335 bmpA; basic membrane protein A and related proteins
D PFJ30894_00119 beta-methylgalactoside transporter inner membrane component K23535 nupB; general nucleoside transport system permease protein
D PFJ30894_00118 Branched-chain amino acid transport system permease component K23536 nupC; general nucleoside transport system permease protein
D PFJ30894_00120 rbsA_1; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D PFJ30894_00833 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PFJ30894_00831 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PFJ30894_00832 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PFJ30894_01515 xylF; D-xylose-binding periplasmic protein precursor K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PFJ30894_01149 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D PFJ30894_01150 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PFJ30894_01151 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PFJ30894_01152 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PFJ30894_00334 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D PFJ30894_00331 phnE_1; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PFJ30894_00332 phnE_2; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D PFJ30894_00333 metN_1; Methionine import ATP-binding protein MetN K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PFJ30894_02141 glnH_1; Glutamine-binding periplasmic protein precursor K10036 glnH; glutamine transport system substrate-binding protein
D PFJ30894_02142 glnH_2; Glutamine-binding periplasmic protein precursor K10036 glnH; glutamine transport system substrate-binding protein
D PFJ30894_02140 glnP; Glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein
D PFJ30894_02139 glnQ_3; Glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PFJ30894_02327 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_00459 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_00460 braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_01368 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PFJ30894_02326 livH_3; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PFJ30894_00461 livH_1; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PFJ30894_00462 livH_2; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D PFJ30894_02325 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D PFJ30894_00463 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02324 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_00464 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02323 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PFJ30894_02227 metQ_2; Methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D PFJ30894_00659 metQ_1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D PFJ30894_00660 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D PFJ30894_00661 metN_2; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D PFJ30894_00539 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PFJ30894_00540 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PFJ30894_00541 Branched-chain amino acid transport system permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PFJ30894_00542 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PFJ30894_01062 artJ; ABC transporter arginine-binding protein 1 precursor K17073 lysX1; putative lysine transport system substrate-binding protein
D PFJ30894_01063 yecS; Inner membrane amino-acid ABC transporter permease protein YecS K17074 lysX2; putative lysine transport system permease protein
D PFJ30894_01064 glnQ_2; Glutamine transport ATP-binding protein GlnQ K17076 lysY; putative lysine transport system ATP-binding protein
D PFJ30894_00137 fliY; Cystine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PFJ30894_00136 artQ; Arginine transport system permease protein ArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D PFJ30894_02352 ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PFJ30894_00883 nikA; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PFJ30894_00222 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PFJ30894_00881 gsiC_2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PFJ30894_00223 gsiC_1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PFJ30894_02350 nikB; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PFJ30894_02351 gsiD_3; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PFJ30894_00882 gsiD_2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PFJ30894_00224 gsiD_1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PFJ30894_02353 oppD_3; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PFJ30894_00225 oppD_1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PFJ30894_00884 oppD_2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PFJ30894_02354 gsiA_2; Glutathione import ATP-binding protein GsiA K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PFJ30894_00885 oppF; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PFJ30894_01860 vitamin B12-transporter protein BtuF K25113 htsA; heme transport system substrate-binding protein
D PFJ30894_01859 yfhA; putative siderophore transport system permease protein YfhA K25114 htsB; heme transport system permease protein
D PFJ30894_01858 yusV_4; putative siderophore transport system ATP-binding protein YusV K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D PFJ30894_00962 yhfQ_1; Putative ABC transporter substrate-binding lipoprotein YhfQ precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PFJ30894_01793 yfmC_2; Fe(3+)-citrate-binding protein YfmC precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PFJ30894_01863 btuF; Vitamin B12-binding protein precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PFJ30894_01883 yfmC_3; Fe(3+)-citrate-binding protein YfmC precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PFJ30894_00783 yfmC_1; Fe(3+)-citrate-binding protein YfmC precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PFJ30894_00961 hmuU_1; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D PFJ30894_01792 hmuU_3; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D PFJ30894_00960 yusV_1; putative siderophore transport system ATP-binding protein YusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PFJ30894_01791 yusV_3; putative siderophore transport system ATP-binding protein YusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PFJ30894_01781 yhfQ_2; Putative ABC transporter substrate-binding lipoprotein YhfQ precursor K25034 btuF; cobalamin transport system substrate-binding protein
D PFJ30894_01871 corrinoid ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PFJ30894_01787 yfiY; putative siderophore-binding lipoprotein YfiY precursor K25034 btuF; cobalamin transport system substrate-binding protein
D PFJ30894_01786 hmuU_2; Hemin transport system permease protein HmuU K25027 btuC; cobalamin transport system permease protein
D PFJ30894_01772 yusV_2; putative siderophore transport system ATP-binding protein YusV K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PFJ30894_00568 znuA; High-affinity zinc uptake system binding-protein ZnuA precursor K09815 znuA; zinc transport system substrate-binding protein
D PFJ30894_00570 znuB; High-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D PFJ30894_00569 znuC; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PFJ30894_02368 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PFJ30894_01769 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D PFJ30894_01112 ecfT_2; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D PFJ30894_00621 ecfT_1; Energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D PFJ30894_01110 ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_00619 ykoD_1; Putative HMP/thiamine import ATP-binding protein YkoD K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_01111 ecfA2_2; Energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_00620 ecfA2_1; Energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_01770 ykoD_2; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PFJ30894_01533 kpsM; Polysialic acid transport protein KpsM K09690 wzm; homopolymeric O-antigen transport system permease protein
D PFJ30894_01534 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PFJ30894_00860 lptF; Lipopolysaccharide export system permease protein LptF K11720 lptG; lipopolysaccharide export system permease protein
D PFJ30894_00859 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PFJ30894_00468 ybhR; Inner membrane transport permease YbhR K25180 ybhR; drug efflux transport system permease protein
D PFJ30894_00469 ybhS; Inner membrane transport permease YbhS K25181 ybhS; drug efflux transport system permease protein
D PFJ30894_00470 ybhF; putative ABC transporter ATP-binding protein YbhF K25182 ybhF; drug efflux transport system ATP-binding protein
D PFJ30894_00471 macA_1; Macrolide export protein MacA K25183 ybhG; membrane fusion protein YbhG
D PFJ30894_02132 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PFJ30894_02133 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PFJ30894_01766 drrA; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PFJ30894_00954 macB_2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D PFJ30894_00953 macB_1; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PFJ30894_02162 sufC; putative ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PFJ30894_00624 sdcS_2; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_00789 sdcS_4; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_00919 sdcS_6; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_01913 sdcS_7; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_00319 sdcS_1; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_01981 ybhI_3; Inner membrane protein YbhI K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_00673 sdcS_3; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_02316 sdcS_8; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_02317 sdcS_9; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PFJ30894_00143 norM_1; Multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D PFJ30894_00880 dinF_2; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D PFJ30894_00480 dinF_1; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D PFJ30894_01108 mepA_1; Multidrug export protein MepA K26937 dinF; MATE family, multidrug efflux pump
D PFJ30894_01695 mepA_2; Multidrug export protein MepA K26937 dinF; MATE family, multidrug efflux pump
D PFJ30894_00674 norM_2; Multidrug resistance protein NorM K26937 dinF; MATE family, multidrug efflux pump
D PFJ30894_00148 yhjX_1; putative MFS-type transporter YhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PFJ30894_00943 yhjX_2; putative MFS-type transporter YhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PFJ30894_02001 sauU; putative sulfoacetate transporter SauU K03535 gudP; MFS transporter, ACS family, glucarate transporter
D PFJ30894_00656 bcr; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PFJ30894_02284 tetA; Tetracycline resistance protein, class B K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PFJ30894_01961 pbuE; Purine efflux pump PbuE K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PFJ30894_02178 enterobactin exporter EntS K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D PFJ30894_00414 fsr; Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PFJ30894_00133 ynfM; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PFJ30894_00579 amtB; Ammonia channel precursor K03320 amt; ammonium transporter, Amt family
D PFJ30894_01190 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PFJ30894_00475 mscS; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D PFJ30894_00023 ynaI; Low conductance mechanosensitive channel YnaI K16052 ynaI; MscS family membrane protein
D PFJ30894_01764 exbB_1; Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D PFJ30894_01870 exbB_2; Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D PFJ30894_01869 exbD_2; Biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PFJ30894_00112 CorA-like Mg2+ transporter protein K03284 corA; magnesium transporter
D PFJ30894_00181 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D PFJ30894_00791 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D PFJ30894_02212 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFJ30894_01906 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFJ30894_02319 corC_3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFJ30894_00288 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PFJ30894_00186 fadL; Long-chain fatty acid transport protein precursor K06076 fadL; long-chain fatty acid transport protein
D PFJ30894_00481 aidA-I_1; AIDA-I autotransporter precursor K12678 aidA-I; autotransporter family porin
D PFJ30894_02180 Extracellular serine protease precursor K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PFJ30894_01157 pfeA; Ferric enterobactin receptor precursor K16092 btuB; vitamin B12 transporter
D PFJ30894_01773 cirA_5; Colicin I receptor precursor K16092 btuB; vitamin B12 transporter
D PFJ30894_01774 cirA_6; Colicin I receptor precursor K16092 btuB; vitamin B12 transporter
D PFJ30894_01880 btuB; Vitamin B12 transporter BtuB precursor K16092 btuB; vitamin B12 transporter
D PFJ30894_01884 cirA_10; Colicin I receptor precursor K16092 btuB; vitamin B12 transporter
D PFJ30894_01779 cirA_7; Colicin I receptor precursor K16092 btuB; vitamin B12 transporter
D PFJ30894_00782 cirA_3; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PFJ30894_00959 cirA_4; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PFJ30894_00242 cirA_1; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PFJ30894_01854 cirA_8; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PFJ30894_00219 fcuA_1; Ferrichrome receptor FcuA precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFJ30894_00220 fcuA_2; Ferrichrome receptor FcuA precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFJ30894_00274 cirA_2; Colicin I receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PFJ30894_00370 kpsD; Polysialic acid transport protein KpsD precursor K01991 wza; polysaccharide biosynthesis/export protein
D PFJ30894_00838 bamA; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family
D PFJ30894_00835 AsmA family protein K09800 tamB; translocation and assembly module TamB
D PFJ30894_00590 Hep_Hag autotransporter K21449 ata; trimeric autotransporter adhesin
D PFJ30894_00592 Hep_Hag K21449 ata; trimeric autotransporter adhesin
D PFJ30894_00857 Lipopolysaccharide-assembly, LptC-related K11719 lptC; lipopolysaccharide export system protein LptC
D PFJ30894_02314 lrgA; Antiholin-like protein LrgA K06518 cidA; holin-like protein
D PFJ30894_00026 adiC; Arginine/agmatine antiporter K03759 adiC; arginine:agmatine antiporter
D PFJ30894_02272 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D PFJ30894_00981 czcA; Cobalt-zinc-cadmium resistance protein CzcA K18303 mexK; multidrug efflux pump
D PFJ30894_01272 qacC; Quaternary ammonium compound-resistance protein QacC K03297 emrE; small multidrug resistance pump
D PFJ30894_00413 putative DMT superfamily transporter inner membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D PFJ30894_01512 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PFJ30894_01486 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PFJ30894_00268 L-lactate permease K03303 lutP; lactate permease
D PFJ30894_01454 panF; Sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D PFJ30894_00007 putP_1; Sodium/proline symporter K11928 putP; sodium/proline symporter
D PFJ30894_00075 gltS; Sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D PFJ30894_02190 mleN; Malate-2H(+)/Na(+)-lactate antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D PFJ30894_00561 ybaL_1; Inner membrane protein YbaL K26735 KEA4_5_6; K+:H+ antiporter
D PFJ30894_01959 ybaL_2; Inner membrane protein YbaL K26735 KEA4_5_6; K+:H+ antiporter
D PFJ30894_01800 trkH_1; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PFJ30894_01801 trkH_2; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PFJ30894_01168 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D PFJ30894_01802 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PFJ30894_01169 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D PFJ30894_02074 uraA; Uracil permease K02824 uraA; uracil permease
D PFJ30894_02164 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D PFJ30894_00558 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D PFJ30894_02332 chrA1; Chromate transport protein K07240 chrA; chromate transporter
D PFJ30894_02333 srpC_2; putative chromate transport protein K07240 chrA; chromate transporter
D PFJ30894_00149 chrA; Chromate transport protein K07240 chrA; chromate transporter
D PFJ30894_00150 srpC_1; putative chromate transport protein K07240 chrA; chromate transporter
D PFJ30894_00774 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D PFJ30894_01318 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PFJ30894_01319 siaT_1; Sialic acid TRAP transporter permease protein SiaT K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PFJ30894_00866 Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D PFJ30894_00038 dcuD_1; Putative cryptic C4-dicarboxylate transporter DcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PFJ30894_00512 dcuD_2; Putative cryptic C4-dicarboxylate transporter DcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PFJ30894_00639 mrpB; Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PFJ30894_00640 mnhC1; Na(+)/H(+) antiporter subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PFJ30894_00641 mrpD_1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PFJ30894_00642 mrpD_2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PFJ30894_00644 mrpA_2; Na(+)/H(+) antiporter subunit A K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PFJ30894_00634 mnhE1; Na(+)/H(+) antiporter subunit E1 K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PFJ30894_00636 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PFJ30894_02377 spoVB_2; Stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D PFJ30894_00286 spoVB_1; Stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D PFJ30894_00340 Membrane transport protein K24180 mleP; malate permease and related proteins
D PFJ30894_00507 Membrane transport protein K24180 mleP; malate permease and related proteins
D PFJ30894_01167 Membrane transport protein K24180 mleP; malate permease and related proteins
D PFJ30894_02196 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PFJ30894_02194 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D PFJ30894_02195 Branched-chain amino acid transport protein AzlD K26606 azlD; branched chain amino acid efflux pump
D PFJ30894_00134 niaX; Niacin transporter NiaX K16788 niaX; niacin transporter
D PFJ30894_01979 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D PFJ30894_00239 ftsW; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D PFJ30894_01868 transport protein TonB K03832 tonB; periplasmic protein TonB
D PFJ30894_01992 hppA1; Putative K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D PFJ30894_00913 gcdB_1; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00917 gcdB_2; Glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_00493 madB; Carboxybiotin decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PFJ30894_01836 Methylmalonyl-CoA carboxyltransferase 5S subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D PFJ30894_00914 Methylmalonyl-CoA carboxyltransferase 12S subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PFJ30894_00318 Methylmalonyl-CoA carboxyltransferase 12S subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PFJ30894_00910 Methylmalonyl-CoA carboxyltransferase 12S subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PFJ30894_00916 gcdC_2; Glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PFJ30894_00912 gcdC_1; Glutaconyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PFJ30894_00911 Oxaloacetate decarboxylase, gamma chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PFJ30894_00915 Oxaloacetate decarboxylase, gamma chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PFJ30894_00496 madA; Acetyl-S-ACP:malonate ACP transferase K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D PFJ30894_00497 mdcC; Malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D PFJ30894_00982 macA_3; Macrolide export protein MacA K18302 mexJ; membrane fusion protein, multidrug efflux system
D PFJ30894_01019 bepF; Efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_01520 mdtA; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_00368 ywqD; Tyrosine-protein kinase YwqD K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PFJ30894_00369 ptk; Tyrosine-protein kinase ptk K25590 epsF; protein tyrosine kinase modulator
D PFJ30894_00888 feoA; Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PFJ30894_02065 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PFJ30894_00889 feoB_1; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PFJ30894_02066 feoB_2; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PFJ30894_01562 putative Mg(2+) transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:pfac02044]
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
D PFJ30894_01377 pulG_2; Type II secretion system protein G precursor K02456 gspG; general secretion pathway protein G
D PFJ30894_01496 pulG_3; Type II secretion system protein G precursor K02456 gspG; general secretion pathway protein G
D PFJ30894_01516 comC; Type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PFJ30894_01493 epsE; Type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D PFJ30894_01376 gspF; Putative type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D PFJ30894_01495 epsF; Type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D PFJ30894_01517 Competence protein A K02662 pilM; type IV pilus assembly protein PilM
D PFJ30894_01519 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO
D PFJ30894_01491 pilQ; Type IV pilus biogenesis and competence protein PilQ precursor K02666 pilQ; type IV pilus assembly protein PilQ
D PFJ30894_01494 pilT; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D PFJ30894_01139 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D PFJ30894_00813 tadA_1; tRNA-specific adenosine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PFJ30894_01140 ComEC family competence protein K02238 comEC; competence protein ComEC
D PFJ30894_02128 ComEC family competence protein K02238 comEC; competence protein ComEC
D PFJ30894_01127 ComEC family competence protein K02238 comEC; competence protein ComEC
D PFJ30894_00481 aidA-I_1; AIDA-I autotransporter precursor K12678 aidA-I; autotransporter family porin
D PFJ30894_02180 Extracellular serine protease precursor K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D PFJ30894_02137 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PFJ30894_01364 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PFJ30894_01047 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PFJ30894_01365 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PFJ30894_01993 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PFJ30894_01099 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PFJ30894_01280 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PFJ30894_01278 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PFJ30894_01362 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PFJ30894_00437 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:pfac02042]
D PFJ30894_01808 potassium-tellurite ethidium and proflavin transporter K11041 eta; exfoliative toxin A/B
D PFJ30894_02212 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFJ30894_01906 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFJ30894_02319 corC_3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PFJ30894_01351 hemolysin-III related K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pfac02022]
D PFJ30894_01155 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PFJ30894_01154 phoB; Phosphate regulon transcriptional regulatory protein PhoB K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PFJ30894_00629 srrA_1; Transcriptional regulatory protein SrrA K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PFJ30894_00399 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PFJ30894_00398 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PFJ30894_02017 srrA_2; Transcriptional regulatory protein SrrA K07775 resD; two-component system, OmpR family, response regulator ResD
D PFJ30894_01653 dcuS; Sensor histidine kinase DcuS K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PFJ30894_01654 dcuR; Transcriptional regulatory protein DcuR K11615 malR; two-component system, CitB family, response regulator MalR
D PFJ30894_00777 ypdB; Transcriptional regulatory protein YpdB K02477 K02477; two-component system, LytTR family, response regulator
D PFJ30894_02261 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D PFJ30894_02260 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR
D PFJ30894_00589 rcsC; Sensor histidine kinase RcsC K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D PFJ30894_00765 barA_1; Signal transduction histidine-protein kinase BarA K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D PFJ30894_02331 barA_3; Signal transduction histidine-protein kinase BarA K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pfac02035]
D PFJ30894_01494 pilT; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D PFJ30894_01493 epsE; Type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D PFJ30894_01376 gspF; Putative type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D PFJ30894_01495 epsF; Type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D PFJ30894_01516 comC; Type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PFJ30894_01491 pilQ; Type IV pilus biogenesis and competence protein PilQ precursor K02666 pilQ; type IV pilus assembly protein PilQ
D PFJ30894_01519 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO
D PFJ30894_01517 Competence protein A K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pfac04812]
D PFJ30894_00827 mreB_1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PFJ30894_00925 mreB_2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PFJ30894_02049 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PFJ30894_00453 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D PFJ30894_00442 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PFJ30894_00454 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pfac04147]
D PFJ30894_01994 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PFJ30894_01997 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PFJ30894_01996 pgk_tpi; Bifunctional PGK/TIM K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PFJ30894_01374 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PFJ30894_00511 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PFJ30894_02258 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PFJ30894_01329 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PFJ30894_02129 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PFJ30894_01631 guaB_3; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PFJ30894_01061 guaB_2; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PFJ30894_01045 tufA_1; Elongation factor Tu K02358 tuf; elongation factor Tu
D PFJ30894_01078 tufA_2; Elongation factor Tu K02358 tuf; elongation factor Tu
D PFJ30894_01335 hinT; HIT-like protein HinT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PFJ30894_02211 ldhB; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PFJ30894_00130 lcfB; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PFJ30894_01340 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PFJ30894_01662 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PFJ30894_01100 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PFJ30894_02120 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PFJ30894_02121 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PFJ30894_01142 glnA_2; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00577 glnA_1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PFJ30894_00525 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PFJ30894_00986 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PFJ30894_02109 purH_2; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
C 02048 Prokaryotic defense system [BR:pfac02048]
D PFJ30894_01183 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PFJ30894_01184 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D PFJ30894_01182 cas9; CRISPR-associated endonuclease Cas9/Csn1 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D PFJ30894_02253 tabA; Toxin-antitoxin biofilm protein TabA K19334 tabA; biofilm protein TabA
D PFJ30894_02049 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PFJ30894_00827 mreB_1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PFJ30894_00925 mreB_2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PFJ30894_00320 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PFJ30894_00343 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pfac01504]
D PFJ30894_01536 Aminoglycoside 3-N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D PFJ30894_02178 enterobactin exporter EntS K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D PFJ30894_01398 cat3; Chloramphenicol acetyltransferase 3 K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PFJ30894_02013 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PFJ30894_01019 bepF; Efflux pump periplasmic linker BepF K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_01520 mdtA; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D PFJ30894_00982 macA_3; Macrolide export protein MacA K18302 mexJ; membrane fusion protein, multidrug efflux system
D PFJ30894_00981 czcA; Cobalt-zinc-cadmium resistance protein CzcA K18303 mexK; multidrug efflux pump
D PFJ30894_00834 tolC; Outer membrane protein TolC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pfac00537]
D PFJ30894_00511 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pfac03100]
D PFJ30894_02004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_00616 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_00675 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_02078 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PFJ30894_01507 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_02241 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_02173 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_02175 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PFJ30894_01747 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PFJ30894_02252 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PFJ30894_00393 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFJ30894_01852 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFJ30894_01888 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PFJ30894_01849 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PFJ30894_00104 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PFJ30894_02160 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PFJ30894_00391 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFJ30894_02251 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFJ30894_02159 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PFJ30894_00867 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_01850 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_01889 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_00270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_01506 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PFJ30894_00105 tRNA-His K14226 tRNA-His; tRNA His
D PFJ30894_02005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PFJ30894_02079 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PFJ30894_01848 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_00102 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_01956 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_02290 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_02289 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PFJ30894_00103 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFJ30894_00308 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFJ30894_00390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PFJ30894_01042 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFJ30894_01044 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFJ30894_01349 tRNA-Met K14230 tRNA-Met; tRNA Met
D PFJ30894_00394 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PFJ30894_01851 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PFJ30894_01650 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFJ30894_01192 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFJ30894_01505 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PFJ30894_00083 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFJ30894_00179 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFJ30894_02336 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PFJ30894_01040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFJ30894_00651 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFJ30894_01043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PFJ30894_01890 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PFJ30894_00392 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFJ30894_02250 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFJ30894_01445 tRNA-Val K14237 tRNA-Val; tRNA Val
D PFJ30894_00417 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PFJ30894_02006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PFJ30894_00336 bdhA_2; NADH-dependent butanol dehydrogenase A K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D PFJ30894_02364 Long-chain acyl-[acyl-carrier-protein] reductase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D PFJ30894_01187 ydjP; AB hydrolase superfamily protein YdjP K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PFJ30894_01564 bcp; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PFJ30894_01004 ahpC; Alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PFJ30894_00902 hndB; NADP-reducing hydrogenase subunit HndB K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D PFJ30894_00903 hndC; NADP-reducing hydrogenase subunit HndC K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D PFJ30894_00904 hndD_1; NADP-reducing hydrogenase subunit HndC K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D PFJ30894_01350 yhhW; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PFJ30894_02271 dfx; Desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D PFJ30894_01162 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PFJ30894_00773 anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PFJ30894_02046 pflA; Pyruvate formate-lyase 1-activating enzyme K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PFJ30894_02110 hypothetical protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PFJ30894_01174 hyfB_1; Hydrogenase-4 component B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D PFJ30894_01176 hyfE; Hydrogenase-4 component E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D PFJ30894_01177 hyfB_2; Hydrogenase-4 component B K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D PFJ30894_00785 hemN_2; Oxygen-independent coproporphyrinogen-III oxidase 1 K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D PFJ30894_00998 nat; Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D PFJ30894_00444 yjaB; putative N-acetyltransferase YjaB K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PFJ30894_01522 AIR carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D PFJ30894_02163 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PFJ30894_00252 apbE; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PFJ30894_00169 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D PFJ30894_01344 yqfL; Putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PFJ30894_01417 Polyphosphate kinase 2 K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D PFJ30894_01207 polA_1; DNA polymerase I K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D PFJ30894_00501 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D PFJ30894_02119 disA; DNA integrity scanning protein DisA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PFJ30894_01531 pglC; Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D PFJ30894_01991 est; Carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D PFJ30894_00131 flK; Fluoroacetyl-CoA thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D PFJ30894_02237 ybgC; Acyl-CoA thioester hydrolase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PFJ30894_00371 ywqE; Tyrosine-protein phosphatase YwqE K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PFJ30894_01687 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PFJ30894_00571 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PFJ30894_02015 Mitochondrial PGP phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D PFJ30894_00314 nrnA_1; Bifunctional oligoribonuclease and PAP phosphatase NrnA K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D PFJ30894_00379 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PFJ30894_00377 rnmV; Ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D PFJ30894_01587 def1; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PFJ30894_00801 pgdA; Peptidoglycan-N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PFJ30894_00363 glucosamine-6-phosphate deaminase-like protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D PFJ30894_00106 yabJ; Enamine/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PFJ30894_02320 CYTH domain protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D PFJ30894_02268 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PFJ30894_01181 dpaL; Diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D PFJ30894_00129 Asparagine synthase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D PFJ30894_01523 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D PFJ30894_00247 rnfD; Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PFJ30894_00246 rnfC; Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PFJ30894_00251 rnfB; Electron transport complex protein rnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PFJ30894_02213 Calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PFJ30894_00887 cadA; Cadmium, zinc and cobalt-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PFJ30894_00095 mgtB; Magnesium-transporting ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D PFJ30894_02219 sfsA; Sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D PFJ30894_00465 guaB_1; Inosine-5'-monophosphate dehydrogenase K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D PFJ30894_00248 rnfG; Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PFJ30894_00249 rnfE; Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PFJ30894_00250 rnfA; Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PFJ30894_00342 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PFJ30894_01022 fprA; Nitric oxide reductase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D PFJ30894_01856 nifD_2; Nitrogenase molybdenum-iron protein alpha chain K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D PFJ30894_02273 Flavodoxin K03839 fldA; flavodoxin I
D PFJ30894_00637 putative monovalent cation/H+ antiporter subunit B K14113 ehbD; energy-converting hydrogenase B subunit D
D PFJ30894_00151 yccM_1; Putative electron transport protein YccM K02574 napH; ferredoxin-type protein NapH
D PFJ30894_00273 yccM_2; Putative electron transport protein YccM K02574 napH; ferredoxin-type protein NapH
D PFJ30894_02034 yccM_3; Putative electron transport protein YccM K02574 napH; ferredoxin-type protein NapH
D PFJ30894_00545 lpd; Dihydrolipoyl dehydrogenase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D PFJ30894_00170 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PFJ30894_01420 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PFJ30894_01821 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D PFJ30894_01526 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PFJ30894_02024 abgT; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
D PFJ30894_01718 hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PFJ30894_00145 Barstar K03623 yhcO; ribonuclease inhibitor
D PFJ30894_00206 csp; Cold shock protein 1 K03704 cspA; cold shock protein
D PFJ30894_02278 cspB; Cold shock protein CspB K03704 cspA; cold shock protein
D PFJ30894_00164 rps1; 30S ribosomal protein S1 K06959 tex; protein Tex
D PFJ30894_01581 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D PFJ30894_00429 hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D PFJ30894_02373 yugI; General stress protein 13 K07571 K07571; S1 RNA binding domain protein
D PFJ30894_01314 Ribonuclease K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D PFJ30894_00868 tig; Trigger factor K03545 tig; trigger factor
D PFJ30894_01988 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D PFJ30894_01304 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D PFJ30894_00655 ogt_2; Methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PFJ30894_00924 hypothetical protein K03630 radC; DNA repair protein RadC
D PFJ30894_00984 RmuC family protein K09760 rmuC; DNA recombination protein RmuC
D PFJ30894_01303 hypothetical protein K07460 yraN; putative endonuclease
D PFJ30894_02279 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D PFJ30894_01625 hypothetical protein K04096 smf; DNA processing protein
D PFJ30894_00718 Terminase small subunit K07474 xtmA; phage terminase small subunit
D PFJ30894_01811 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PFJ30894_01210 Virulence-associated protein E K06919 K06919; putative DNA primase/helicase
C 99979 Viral proteins
C 99998 Others
D PFJ30894_00543 pspE; Thiosulfate sulfurtransferase PspE precursor K03972 pspE; phage shock protein E
D PFJ30894_00177 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PFJ30894_00531 steT; Serine/threonine exchanger SteT K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PFJ30894_00779 putP_2; Sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PFJ30894_00110 sglT_1; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PFJ30894_01369 acetate permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D PFJ30894_02171 sglT_2; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PFJ30894_01366 Sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PFJ30894_02243 alsT_3; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PFJ30894_01504 alsT_2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PFJ30894_01188 brnQ; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PFJ30894_00562 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PFJ30894_02301 ybhI_4; Inner membrane protein YbhI K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D PFJ30894_00175 SigmaK-factor processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D PFJ30894_00438 R3H domain protein K06346 jag; spoIIIJ-associated protein
D PFJ30894_01453 sporulation inhibitor KapD K06348 kapD; sporulation inhibitor KapD
D PFJ30894_01955 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D PFJ30894_02266 Sporulation and spore germination K06298 gerM; germination protein M
C 99993 Cell motility
C 99995 Signaling proteins
D PFJ30894_00017 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D PFJ30894_01320 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D PFJ30894_01310 hypothetical protein K07166 K07166; ACT domain-containing protein
D PFJ30894_01910 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PFJ30894_01144 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PFJ30894_00840 periplasmic chaperone K06142 hlpA; outer membrane protein
D PFJ30894_00842 Outer membrane protein (OmpH-like) K06142 hlpA; outer membrane protein
D PFJ30894_01881 periplasmic chaperone K06142 hlpA; outer membrane protein
D PFJ30894_00255 emrK; putative multidrug resistance protein EmrK K01993 ABC-2.TX; HlyD family secretion protein
D PFJ30894_00952 macA_2; Macrolide export protein MacA K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D PFJ30894_01153 hypothetical protein K02039 phoU; phosphate transport system protein
D PFJ30894_00325 phnK; Putative phosphonates utilization ATP-binding protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PFJ30894_01126 Patatin-like phospholipase K07001 K07001; NTE family protein
D PFJ30894_02161 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PFJ30894_02182 LemA family protein K03744 lemA; LemA protein
D PFJ30894_00214 yqjA; Inner membrane protein YqjA K03975 dedA; membrane-associated protein
C 99997 Function unknown
D PFJ30894_01784 Anaerobic sulfatase-maturating enzyme K06871 K06871; uncharacterized protein
D PFJ30894_02081 chuR; Anaerobic sulfatase-maturating enzyme K06871 K06871; uncharacterized protein
D PFJ30894_02183 hypothetical protein K06872 K06872; uncharacterized protein
D PFJ30894_01830 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D PFJ30894_01962 fermentation/respiration switch protein K06889 K06889; uncharacterized protein
D PFJ30894_00958 ybhL; Inner membrane protein YbhL K06890 K06890; uncharacterized protein
D PFJ30894_01236 Phage late control gene D protein GPD K06905 D; Bacteriophage probable baseplate hub protein
D PFJ30894_01229 Phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D PFJ30894_01230 Phage tail tube protein FII K06908 FII; Bacteriophage tail tube protein
D PFJ30894_01864 Archaeal ATPase K06921 K06921; uncharacterized protein
D PFJ30894_01389 hypothetical protein K06923 K06923; uncharacterized protein
D PFJ30894_02039 hypothetical protein K06933 K06933; uncharacterized protein
D PFJ30894_01282 hypothetical protein K06960 K06960; uncharacterized protein
D PFJ30894_01035 YacP-like NYN domain protein K06962 K06962; uncharacterized protein
D PFJ30894_01919 hypothetical protein K06975 K06975; uncharacterized protein
D PFJ30894_00879 Succinylglutamate desuccinylase Aspartoacylase family protein K06987 K06987; uncharacterized protein
D PFJ30894_01622 yaaH; Inner membrane protein YaaH K07034 K07034; uncharacterized protein
D PFJ30894_01173 Amidohydrolase K07045 K07045; uncharacterized protein
D PFJ30894_02249 Nitroreductase family protein K07078 K07078; uncharacterized protein
D PFJ30894_00099 yhdN_1; General stress protein 69 K07079 K07079; uncharacterized protein
D PFJ30894_01701 yhdN_2; General stress protein 69 K07079 K07079; uncharacterized protein
D PFJ30894_01683 alkanesulfonate transporter substrate-binding subunit K07080 K07080; uncharacterized protein
D PFJ30894_00969 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D PFJ30894_00425 hypothetical protein K07090 K07090; uncharacterized protein
D PFJ30894_02231 yfcE; Phosphodiesterase YfcE K07095 K07095; uncharacterized protein
D PFJ30894_01960 putative metallophosphoesterase K07098 K07098; uncharacterized protein
D PFJ30894_01136 Calcineurin-like phosphoesterase K07099 K07099; uncharacterized protein
D PFJ30894_00873 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D PFJ30894_01396 pyrroloquinoline quinone biosynthesis protein PqqE K07129 K07129; uncharacterized protein
D PFJ30894_01548 hypothetical protein K07133 K07133; uncharacterized protein
D PFJ30894_00349 hypothetical protein K07133 K07133; uncharacterized protein
D PFJ30894_02220 hypothetical protein K07133 K07133; uncharacterized protein
D PFJ30894_00121 dihydrolipoamide dehydrogenase K07137 K07137; uncharacterized protein
D PFJ30894_02117 tricarballylate dehydrogenase K07137 K07137; uncharacterized protein
D PFJ30894_01334 hypothetical protein K07138 K07138; uncharacterized protein
D PFJ30894_00572 asrC; Anaerobic sulfite reductase subunit C K07138 K07138; uncharacterized protein
D PFJ30894_01628 hypothetical protein K07149 K07149; uncharacterized protein
D PFJ30894_00193 hypothetical protein K07149 K07149; uncharacterized protein
D PFJ30894_00094 ydfK_1; putative membrane protein YdfK K07150 K07150; uncharacterized protein
D PFJ30894_00276 ydfK_2; putative membrane protein YdfK K07150 K07150; uncharacterized protein
D PFJ30894_00455 ydfK_3; putative membrane protein YdfK K07150 K07150; uncharacterized protein
D PFJ30894_01337 Yqey-like protein K09117 K09117; uncharacterized protein
D PFJ30894_02344 hypothetical protein K09133 K09133; uncharacterized protein
D PFJ30894_00123 hypothetical protein K09137 K09137; uncharacterized protein
D PFJ30894_01311 hypothetical protein K09157 K09157; uncharacterized protein
D PFJ30894_01131 hypothetical protein K09384 K09384; uncharacterized protein
D PFJ30894_00093 hypothetical protein K09700 K09700; uncharacterized protein
D PFJ30894_00449 hypothetical protein K09707 K09707; uncharacterized protein
D PFJ30894_01589 hypothetical protein K09729 K09729; uncharacterized protein
D PFJ30894_01279 putative DNA-binding protein K09787 K09787; uncharacterized protein
D PFJ30894_00022 hypothetical protein K09793 K09793; uncharacterized protein
D PFJ30894_01720 Divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D PFJ30894_02073 26 kDa periplasmic immunogenic protein precursor K09807 K09807; uncharacterized protein
D PFJ30894_00063 hypothetical protein K09824 virK; uncharacterized protein
D PFJ30894_00967 hypothetical protein K00243 K00243; uncharacterized protein
D PFJ30894_01565 hypothetical protein K09861 K09861; uncharacterized protein
D PFJ30894_00722 hypothetical protein K09960 K09960; uncharacterized protein
D PFJ30894_00720 hypothetical protein K09961 K09961; uncharacterized protein
D PFJ30894_01706 hypothetical protein K01163 K01163; uncharacterized protein
D PFJ30894_00934 hypothetical protein K07584 ysxB; uncharacterized protein
D PFJ30894_01568 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024