+D GENES KO
#
KEGG Orthology (KO) - Pyrococcus furiosus DSM 3638
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pfu00010]
D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PF1784 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PF0312 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PF1874 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PF1057 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PF1959 phosphonopyruvate decarboxylase bcpc K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF0464 glyceraldehyde-3-phosphate:ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6]
D PF0755 non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90]
D PF0289 phosphoenolpyruvate carboxykinase (gtp) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:pfu00020]
D PF0203 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PF0201 aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PF0202 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1770 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PF1773 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PF1767 2-keto acid:ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PF1755 possible fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PF1754 possible fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PF0289 phosphoenolpyruvate carboxykinase (gtp) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:pfu00030]
D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PF1688 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PF1689 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PF1258 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PF0220 hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate formaldehyde lyase) K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF1886 sugar kinase K21056 E2.7.1.212; alpha-D-ribose-1-phosphate 5-kinase (ADP) [EC:2.7.1.212]
D PF0122 translation initiation factor eIF-2b delta K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D PF0236 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PF0755 non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90]
D PF1853 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D PF0346 aldehyde:ferredoxin oxidoreductase (aor) K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PF1203 formaldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PF1961 tungsten-containing formaldehyde ferredoxin oxidoreductase wor4 K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PF1784 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PF0312 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
C 00040 Pentose and glucuronate interconversions [PATH:pfu00040]
D PF1355 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PF0771 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0108 fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pfu00051]
D PF1458 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PF1738 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PF0589 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF1728 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PF0868 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PF0108 fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PF0591 hypothetical protein K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D PF0590 hypothetical protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pfu00052]
D PF0445 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PF0441 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PF0402 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PF1788 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF0073 beta-glucosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF0356 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF1208 beta-mannosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF0363 beta-galactosidase precursor K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
C 00053 Ascorbate and aldarate metabolism
D PF1355 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PF0771 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:pfu00500]
D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PF2044 glycogen synthase K20812 glgA; glycogen synthase [EC:2.4.1.242]
D PF1393 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PF1535 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PF1108 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41]
D PF0477 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PF1939 neopullulanase (alpha-amylase II) K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D PF0272 alpha-amylase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PF0478 alpha-amylase K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19]
D PF1742 putative trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PF1458 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PF1738 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pfu00520]
D PF1233 putative chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D PF1458 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PF1738 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PF0157 glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PF0362 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PF0861 phospho-sugar mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D PF1630 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PF0794 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PF1631 NDP-sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PF0768 acetyl / acyl transferase related protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PF1357 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF1356 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF0770 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PF1355 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PF0771 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PF0445 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PF0441 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PF0402 UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PF1788 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PF0196 hypothetical protein K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PF1728 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PF0868 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PF0589 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:pfu00620]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PF0283 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF1026 malate oxidoreductase (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PF1755 possible fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PF1754 possible fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PF0289 phosphoenolpyruvate carboxykinase (gtp) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF0937 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PF0941 leua homolog alpha-isopropylmalate synthase related K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PF1678 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pfu00630]
D PF0203 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PF0201 aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PF0319 putative phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PF0370 phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PF1419 hypothetical protein K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D PF1156 ribulose-1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PF1999 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PF2000 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PF1492 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PF1521 formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:pfu00640]
D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
C 00650 Butanoate metabolism [PATH:pfu00650]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PF0673 methylmalonyl-CoAdecarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PF0672 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PF1344 putative maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0972 acyl carrier protein synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pfu00660]
D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PF0938 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PF1679 putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PF0939 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PF1680 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PF0940 3-isopropylmalate dehydrogenase 2 K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pfu00562]
D PF2014 extragenic suppressor K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PF1616 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PF1058 hypothetical protein K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pfu00190]
D PF1444 NADH dehydrogenase subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PF1443 NADH dehydrogenase subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PF1442 NADH dehydrogenase subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PF1445 NADH dehydrogenase subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PF1441 NADH dehydrogenase subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PF1446 NADH dehydrogenase subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PF1447 NADH dehydrogenase subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PF0182 ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D PF0183 ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D PF0180 ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D PF0184 ATPase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D PF0179 ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D PF0181 ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D PF0176 ATPase subunit B K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D PF0177 ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D PF0178 ATPase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D PF0257 inorganic pyrophosphatase (pyrophosphate phospho-hydrolase) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pfu00710]
D PF1156 ribulose-1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D PF1057 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PF1874 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PF1688 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PF1689 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PF1258 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:pfu00720]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PF1755 possible fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D PF1754 possible fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF1768 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1771 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF0754 2-keto acid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PF1769 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1772 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF0753 2-keto acid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PF1770 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PF1773 2-keto acid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PF1767 2-keto acid:ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PF0202 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PF0201 aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
C 00680 Methane metabolism [PATH:pfu00680]
D PF1521 formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1975 hypothetical protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PF1956 possible 1,6-fructose biphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PF0613 hypothetical protein K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D PF1784 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PF0312 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D PF0220 hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate formaldehyde lyase) K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D PF0043 phosphoenolpyruvate synthase (pyruvate, water dikinase) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PF1959 phosphonopyruvate decarboxylase bcpc K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PF1921 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00910 Nitrogen metabolism [PATH:pfu00910]
D PF0692 prismane protein homolog K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PF1852 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PF1910 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PF0676 carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pfu00920]
D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1952 iron-sulfur protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PF1330 H-II gamma (hydrogenase subunit gamma) K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4]
D PF0892 sulfhydrogenase gamma subunit K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4]
D PF1329 H-II hydrogenase subunit beta K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D PF0891 sulfhydrogenase beta subunit K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D PF0894 sulfhydrogenase alpha subunit K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5]
D PF1332 H-II alpha (hydrogenase subunit alpha) K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5]
D PF0893 sulfhydrogenase delta subunit K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5]
D PF1331 H-II delta (hydrogenase subunit delta) K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5]
D PF1266 cystathionine gamma-lyase (gamma-cystathionase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pfu00061]
D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pfu00071]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF1197 NADH oxidase/nitrite reductase K00530 nroR; rubredoxin---NAD(P)+ reductase [EC:1.18.1.4]
D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pfu00561]
D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PF2004 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
C 00564 Glycerophospholipid metabolism [PATH:pfu00564]
D PF2005 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PF2003 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PF1382 sn-glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D PF1039 hypothetical protein K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D PF1963 4-hydroxybenzoate octaprenyltransferase, putative K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D PF0398 hypothetical protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
D PF0097 bacteriochlorophyll synthase, 43 kDa subunit homolog K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D PF0073 beta-glucosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF0356 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF1208 beta-mannosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pfu00230]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF0236 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PF0154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PF0422 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PF0430 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PF0199 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PF0197 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PF0431 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PF0426 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PF0427 phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PF0153 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PF0667 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PF1517 hypothetical protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D PF0421 hypothetical protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D PF0285 inosine-5'-monophosphate dehydrogenase (imp dehydrogenase) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PF0931 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PF0249 ham1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PF1515 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PF1516 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PF0853 5'-methylthioadenosine phosphorylase II K26211 K26211; guanosine phosphorylase [EC:2.4.2.15]
D PF0440 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PF1971 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PF1859 hypothetical protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D PF0863 hypothetical protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D PF0308 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PF1607 thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D PF1800 adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PF1045 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PF1134 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PF0501 gtpase domain, related to era and thdf K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D PF0008 hit family protein (hit) K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF0676 carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pfu00240]
D PF1714 carbamoyl-phosphate synthase large chain (glutamine-hydrolysing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PF1713 carbamoyl-phosphate synthase, small (or glutamine) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PF0599 aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PF0598 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PF0189 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PF1539 dihydroorotate dehydrogenase (dihydroorotate oxidase) (dhodehase) K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PF0188 hydrogenase subunit gamma K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PF1034 orotate phosphoribosyl transferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PF1114 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PF1407 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PF0931 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PF0216 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PF1839 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PF0820 cytidylate kinase (ck) (cytidine monophosphate kinase) (CMP kinase) K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PF1241 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PF1607 thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D PF1971 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PF1996 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PF0440 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PF1598 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PF1730 thymidylate kinase (tmk) K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PF0540 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pfu00250]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1976 l-aspartate oxidase (quinolinate synthetase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PF1675 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PF2047 l-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PF0142 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PF1071 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PF0792 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PF0207 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PF0208 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PF0308 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PF0667 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PF0599 aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PF0598 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1852 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PF1910 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PF1714 carbamoyl-phosphate synthase large chain (glutamine-hydrolysing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PF1713 carbamoyl-phosphate synthase, small (or glutamine) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PF0157 glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PF0362 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PF0154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pfu00260]
D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PF1104 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PF1054 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PF0031 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1055 threonine synthase (pyridoxal phosphate binding) K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1406 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1639 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1180 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PF0024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PF1959 phosphonopyruvate decarboxylase bcpc K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PF1921 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PF0265 2-amino-3-ketobutyrate CoA ligase (glycine acetyl transferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PF0991 possible threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PF1999 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PF2000 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PF1492 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
D PF1705 tryptophan synthetase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PF1706 tryptophan synthase, subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PF1592 tryptophan synthase, subunit beta homolog K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pfu00270]
D PF1269 methionine synthase, vitamin-B12 independent isozyme) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PF1268 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PF1866 hypothetical protein K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PF1930 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PF0127 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PF0016 5'-methylthioadenosine phosphorylase I K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PF1538 n-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PF1349 translation initiation factor eIF-2 beta chain K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PF0343 s-adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PF0010 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PF1104 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PF1266 cystathionine gamma-lyase (gamma-cystathionase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PF0380 hypothetical protein K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226]
C 00280 Valine, leucine and isoleucine degradation [PATH:pfu00280]
D PF0969 2-ketovalerate ferredoxin oxidoreductase subunit alpha-2 K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7]
D PF0968 2-ketovalerate ferredoxin oxidoreductase subunit beta-2 K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0970 2-ketovalerate ferredoxin oxidoreductase subunit delta-2 K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7]
D PF1948 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PF1946 methylmalonyl-CoAmutase, subunit alpha K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D PF1477 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D PF0716 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF0972 acyl carrier protein synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pfu00290]
D PF0938 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PF1679 putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PF0939 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PF1680 putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PF0940 3-isopropylmalate dehydrogenase 2 K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PF0936 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PF0942 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PF0937 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PF0941 leua homolog alpha-isopropylmalate synthase related K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PF1678 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pfu00300]
D PF1104 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PF0657 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PF2048 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PF0121 putative aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PF1681 hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D PF0209 ribosomal protein s6 modification protein K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D PF1682 ribosomal protein s6 modification protein K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60]
D PF1684 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D PF1683 n-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D PF1685 acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PF1686 acetylornithine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00310 Lysine degradation
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:pfu00220]
D PF0594 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PF0207 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PF0208 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PF1714 carbamoyl-phosphate synthase large chain (glutamine-hydrolysing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PF1713 carbamoyl-phosphate synthase, small (or glutamine) subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PF0676 carbamate kinase-like carbamoylphosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PF1185 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D PF1681 hypothetical protein K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D PF1682 ribosomal protein s6 modification protein K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60]
D PF1684 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D PF1683 n-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D PF1685 acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PF1686 acetylornithine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:pfu00330]
D PF1623 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D PF1957 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PF0499 metal-binding protein K01480 speB; agmatinase [EC:3.5.3.11]
D PF0127 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PF1930 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PF1715 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pfu00340]
D PF1658 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PF1657 histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PF1664 phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-atp K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PF1662 n-(5'-phospho-d-ribosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PF1661 glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PF1663 imidazoleglycerol-phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PF1660 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF1659 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:pfu00350]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:pfu00360]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pfu00380]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pfu00400]
D PF1690 2-dehydro-3-deoxyphosphoheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PF1691 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PF1692 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D PF1693 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PF1694 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PF1699 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PF1700 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PF1709 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PF1708 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PF1710 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PF1707 phosphoribosyl anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PF1711 indoleglycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PF1705 tryptophan synthetase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PF1706 tryptophan synthase, subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PF1592 tryptophan synthase, subunit beta homolog K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PF1701 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D PF1703 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PF0291 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pfu00410]
D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1387 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D PF1618 ATP-binding protein phnp K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pfu00450]
D PF1266 cystathionine gamma-lyase (gamma-cystathionase) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PF1269 methionine synthase, vitamin-B12 independent isozyme) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PF1268 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PF0164 nifS protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PF1422 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pfu00460]
D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PF2047 l-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PF0142 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pfu00470]
D PF0198 phosphoribosylformylglycinamidine synthase (FGAM synthase i) K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PF1675 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 00480 Glutathione metabolism [PATH:pfu00480]
D PF1272 lactam utilization protein homolog K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PF0202 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PF0127 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pfu00511]
D PF0073 beta-glucosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF0356 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PF1208 beta-mannosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pfu00730]
D PF1531 thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PF1333 phosphomethylpyrimidine kinase (hmp-phosphate kinase) K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D PF1288 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1487 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1835 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1530 thiamine biosynthetic enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D PF1335 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PF1334 thiamine phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PF1877 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PF0501 gtpase domain, related to era and thdf K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PF1800 adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PF1045 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PF1338 transcriptional activator, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PF1337 transcriptional activator, putative K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:pfu00740]
D PF0064 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PF0062 riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PF0063 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PF0061 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PF0988 hypothetical protein K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D PF1116 glycerol-3-phosphate cytidyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2]
D PF1335 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pfu00750]
D PF0031 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1055 threonine synthase (pyridoxal phosphate binding) K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1406 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1639 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1180 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PF1529 ethylene-inducible protein homolog K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PF1528 imidazoleglycerol-phosphate synthase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pfu00760]
D PF1976 l-aspartate oxidase (quinolinate synthetase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PF1977 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PF1978 nicotinate-nucleotide pyrophosphorylase (quinolinate phosphoribosyltransferase (decarboxylating)) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PF1904 nicotinate-nucleotide pyrophosphorylase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PF0458 nucleotidyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D PF0098 NH(3)-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PF1105 pyrazinamidase/nicotinamidase pxnc K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PF1154 transcriptional regulatory protein, sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PF1103 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PF1344 putative maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pfu00770]
D PF0935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PF0936 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PF0942 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PF1143 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PF1396 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PF1869 hypothetical protein K06982 pok; pantoate kinase [EC:2.7.1.169]
D PF1387 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D PF1440 dna/pantothenate metabolism flavoprotein (dfp) K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PF1084 hypothetical protein K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PF0366 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PF0254 hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D PF1159 group II decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00780 Biotin metabolism [PATH:pfu00780]
D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PF1676 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PF0077 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pfu00785]
D PF1158 hypothetical protein K09711 lipS1; lipoyl synthase
D PF0144 hypothetical protein K24689 lipS2; lipoyl synthase
D PF1374 lipoate-protein ligase a K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PF1634 hypothetical protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PF1999 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PF2000 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PF1492 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pfu00790]
D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PF1296 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PF0064 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PF0219 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PF1277 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PF0048 succinoglycan biosynthesis regulator K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PF1832 regulatory protein K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39]
D PF0930 hypothetical protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PF0903 hypothetical protein K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D PF2022 hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D PF1278 hypothetical protein K22102 E4.1.2.59; dihydroneopterin phosphate aldolase [EC:4.1.2.59]
D PF0090 molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PF1854 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PF0100 molybdopterin converting factor (subunit 2) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PF0372 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PF0542 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PF1783 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PF0618 molybdopterin-guanine dinucleotide biosynthesis protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pfu00670]
D PF1778 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PF1341 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PF0540 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pfu00860]
D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PF2038 cob(i)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PF0301 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PF0296 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PF0305 hypothetical protein K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D PF0300 hypothetical protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62]
D PF0299 cobalamin (5'-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PF0836 cobalamin (5'-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pfu00900]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF0972 acyl carrier protein synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PF1848 3-hydroxy-3-methylglutaryl-coenzyme a reductase (hmg-CoAreductase) K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D PF1637 mevalonate kinase (mvk) K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PF1636 acetylglutamate kinase, putative K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D PF0390 hypothetical protein K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182]
D PF0391 hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182]
D PF1138 hypothetical protein K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126]
D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PF0856 hypothetical protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PF1102 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PF1599 undecaprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PF1688 transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PF1689 transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PF0446 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 01054 Nonribosomal peptide structures [PATH:pfu01054]
D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PF1675 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pfu00946]
D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:pfu00261]
D PF1220 hypothetical protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1221 dissimilatory sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PF1053 aspartokinase II alpha subunit K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1052 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PF1056 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PF0657 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pfu00521]
D PF0588 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PF1616 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PF2014 extragenic suppressor K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PF0446 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D PF0446 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PF0235 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C 00401 Novobiocin biosynthesis [PATH:pfu00401]
D PF1703 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PF1709 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PF1708 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pfu00999]
D PF1866 hypothetical protein K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PF1693 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PF0442 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pfu00362]
D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PF0673 methylmalonyl-CoAdecarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PF0672 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pfu00627]
D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PF0283 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PF0865 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pfu00625]
D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PF0463 hydrolase related to 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D PF0463 hydrolase related to 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D PF0966 pyruvate ferredoxin oxidoreductase subunit alpha-2 K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PF0965 pyruvate ferredoxin oxidoreductase subunit beta-2 K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D PF0971 pyruvate ferredoxin oxidoreductase/2-ketovalerate ferredoxin oxidoreductase gamma subunit K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D PF0967 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pfu00643]
D PF1099 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pfu00626]
D PF0075 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pfu03020]
D PF1564 DNA-directed RNA polymerase subunit b K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D PF1563 DNA-directed RNA polymerase subunit a' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D PF1562 DNA-directed RNA polymerase subunit a K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D PF1647 DNA-directed RNA polymerase subunit d K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D PF0050 DNA-directed RNA polymerase subunit l K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D PF0256 DNA-directed RNA polymerase, subunit e' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D PF1036 hypothetical protein K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D PF1565 DNA-directed RNA polymerase subunit h K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D PF1642 DNA-directed RNA polymerase subunit k K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D PF1643 DNA-directed RNA polymerase subunit n K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D PF2009 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors [PATH:pfu03022]
D PF1377 transcription initiation factor IIB chain b K03124 TFIIB; transcription initiation factor TFIIB
D PF0687 transcription initiation factor IIB chain b homolog K03124 TFIIB; transcription initiation factor TFIIB
D PF1295 transcription initiation factor TFIID (TATA-box factor) chain a (TATA sequence-binding protein) (tbp) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PF0491 transcription initiation factor TFIIE K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pfu03010]
D PF1640 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PF1819 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PF1649 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PF1804 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PF1558 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PF1809 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PF1644 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PF1376 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PF1648 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PF1559 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PF1650 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D PF1810 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PF2056 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PF1815 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PF1821 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PF2054 SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D PF1812 SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e
D PF0488 SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e
D PF1069 SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e
D PF1491 SSU ribosomal protein S17E K02962 RP-S17e; small subunit ribosomal protein S17e
D PF1499 SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e
D PF0253 SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e
D PF0218 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e
D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PF1368 SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e
D PF1992 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D PF1822 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PF1825 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PF1811 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PF1808 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PF1993 LSU ribosomal protein L10E K02864 RP-L10; large subunit ribosomal protein L10
D PF1991 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PF1994 LSU ribosomal protein L12A K02869 RP-L12; large subunit ribosomal protein L12
D PF1645 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PF1814 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PF1802 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PF1805 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PF1820 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PF1823 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PF1813 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PF1818 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PF1803 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D PF1824 LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e
D PF1367 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PF1279 LSU ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e
D PF0819 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e
D PF0876 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e
D PF1646 LSU ribosomal protein L18E K02883 RP-L18e; large subunit ribosomal protein L18e
D PF1806 LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e
D PF1035 LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e
D PF1369 LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e
D PF1561 LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e
D PF0378 LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e
D PF1807 LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e
D PF0821 LSU ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e
D PF1872 LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D PF1541 LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e
D PF2008 LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D PF0379 LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e
D PF1475 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PF1018 LSU ribosomal protein L41E K02928 RP-L41e; large subunit ribosomal protein L41e
D PF0217 LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e
D PF0376 LSU ribosomal protein LXA K02944 RP-LX; large subunit ribosomal protein LX
D PF_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PF_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PF_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PF_r004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pfu00970]
D PF_t018 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PF_t020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PF_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PF_t004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PF_t041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PF_t031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PF_t008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PF_t011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PF_t006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PF_t015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PF_t001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PF_t024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PF_t010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PF_t046 tRNA-His K14226 tRNA-His; tRNA His
D PF_t016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PF_t034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PF_t012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PF_t026 tRNA-Met K14230 tRNA-Met; tRNA Met
D PF_t005 tRNA-Met K14230 tRNA-Met; tRNA Met
D PF_t029 tRNA-Met K14230 tRNA-Met; tRNA Met
D PF_t002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PF_t038 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PF_t036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PF_t044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PF_t028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PF_t033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PF_t037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PF_t022 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PF_t023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PF_t042 tRNA-Val K14237 tRNA-Val; tRNA Val
D PF_t021 tRNA-Val K14237 tRNA-Val; tRNA Val
D PF_t043 tRNA-Val K14237 tRNA-Val; tRNA Val
D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PF1461 l-asparaginase (l-asparagine amidohydrolase) asparaginase K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D PF1462 pet112-like protein K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D PF0270 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0086 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0185 partial alanyl-tRNA synthetase matches COOH terminus half K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0428 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0869 aspartyl tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PF0155 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PF1951 partial asparaginyl-tRNA synthetase matches COOH terminus K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PF1351 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PF1204 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PF1024 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PF0290 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PF1096 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PF0135 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PF1293 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PF0264 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PF0989 phenylalanyl-tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PF0990 phenylalanyl-tRNA synthetase beta-chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PF0241 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pfu03060]
D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY
D PF0174 protein export membrane protein K03072 secD; preprotein translocase subunit SecD
D PF0173 protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PF_s002 signal recognition particle; structural RNA K01983 ffs; SRP RNA
D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor
D PF1989 protein transport protein sec61 gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PF1894 hypothetical protein K03105 SRP19; signal recognition particle subunit SRP19
D PF0326 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PF0313 signal sequence peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pfu04122]
D PF0100 molybdopterin converting factor (subunit 2) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PF0090 molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PF0543 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D PF0345 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D PF1605 hypothetical protein K03636 moaD; sulfur-carrier protein
D PF0003 moeB-like protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PF1289 molybdopterin biosynthesis protein moeb K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PF0009 thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PF1854 molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PF0372 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PF1288 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1487 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1835 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1061 hypothetical protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:pfu03050]
D PF0115 ATP-dependent 26S protease regulatory subunit K03420 psmR; proteasome regulatory subunit
D PF1571 proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PF0159 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PF1404 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pfu03018]
D PF0052 hypothetical protein K07573 CSL4; exosome complex component CSL4
D PF1569 hypothetical protein K03679 RRP4; exosome complex component RRP4
D PF1567 hypothetical protein K12589 RRP42; exosome complex component RRP42
D PF1568 ribonuclease ph (rph) K11600 RRP41; exosome complex component RRP41
D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1101 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pfu03030]
D PF1725 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D PF1781 RNaseH II K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PF0212 DNA-directed DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PF0018 DNA polymerase II subunit 1 K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D PF0019 DNA polymerase II subunit 2 K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D PF0482 cell division control protein 21 K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D PF0110 DNA primase, putative K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D PF0111 hypothetical protein K18882 priL; DNA primase large subunit
D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen
D PF0093 replication factor C, small subunit K04801 rfcS; replication factor C small subunit
D PF0092 replication factor C, large subunit K04800 rfcL; replication factor C large subunit
D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03410 Base excision repair [PATH:pfu03410]
D PF1229 glycosylase putative; mutY-nth family K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen
D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PF0511 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PF1385 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PF0258 putative endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03420 Nucleotide excision repair [PATH:pfu03420]
D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen
D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03430 Mismatch repair [PATH:pfu03430]
D PF0474 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen
D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03440 Homologous recombination
D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03450 Non-homologous end-joining
D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
D PF0255 DNA-directed RNA polymerase, subunit e'' K15171 SUPT4H1; transcription elongation factor SPT4
D PF1990 transcription antitermination protein nusG K15172 SUPT5H; transcription elongation factor SPT5
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pfu02010]
D PF0080 hypothetical protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D PF0081 sulfate/thiosulfate transport protein homolog cyst K15496 wtpB; molybdate/tungstate transport system permease protein
D PF0082 membrane protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D PF1518 thiamin-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D PF1751 putative solute binding lipoprotein K02064 thiB; thiamine transport system substrate-binding protein
D PF1520 ABC transporter integral membrane protein K02063 thiP; thiamine transport system permease protein
D PF1748 putative sulfate transport system permease protein, ABC transporter K02063 thiP; thiamine transport system permease protein
D PF1749 putative sulfate transport integral membrane protein K02063 thiP; thiamine transport system permease protein
D PF1519 sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PF1750 putative sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PF1933 putative sugar transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PF1744 trehalose/maltose transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PF1970 putative multiple sugar-binding transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PF1938 putative sugar binding protein (malE-like) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PF1937 putative sugar transport inner membrane protein (malf-like) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PF1936 putative sugar transport inner membrane protein (malg-like) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PF1739 trehalose/maltose binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PF1740 trehalose/maltose transport inner membrane protein K10237 thuF; trehalose/maltose transport system permease protein
D PF1741 trehalose/maltose transport inner membrane protein K10238 thuG; trehalose/maltose transport system permease protein
D PF1695 hypothetical lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PF1697 putative ribose/galactose ABC transporter K23535 nupB; general nucleoside transport system permease protein
D PF1698 putative ribose ABC transporter K23536 nupC; general nucleoside transport system permease protein
D PF1696 putative ABC sugar transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D PF0119 putative perplasmic sugar binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D PF0118 putative ABC transporter permease protein K17238 inoF; inositol-phosphate transport system permease protein
D PF0117 putative sugar transport protein K17239 inoG; inositol-phosphate transport system permease protein
D PF0116 putative multiple sugar transport protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D PF1003 phosphate-binding periplasmic protein precursor (pbp) K02040 pstS; phosphate transport system substrate-binding protein
D PF1006 putative phosphate transport system permease protein C K02037 pstC; phosphate transport system permease protein
D PF1007 phosphate transport system permease psta K02038 pstA; phosphate transport system permease protein
D PF1008 putative ABC transport protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PF0530 hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D PF0531 cobalamin biosynthesis protein m K02007 cbiM; cobalt/nickel transport system permease protein
D PF0529 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein
D PF0528 cobalt transport ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PF1677 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PF0067 cobalt transport ABC transporter, integral membrane component K16785 ecfT; energy-coupling factor transport system permease protein
D PF1857 cobalt transport ATP-binding protein cbio K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PF0068 cobalt transport ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PF0579 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein
D PF0578 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein
D PF0577 ATP-binding transport protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pfu03070]
D PF0174 protein export membrane protein K03072 secD; preprotein translocase subunit SecD
D PF0173 protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY
D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor
D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pfu02020]
D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PF1003 phosphate-binding periplasmic protein precursor (pbp) K02040 pstS; phosphate transport system substrate-binding protein
D PF1721 hypothetical protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D PF1026 malate oxidoreductase (malic enzyme) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF1630 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PF0794 UDP-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PF1631 NDP-sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pfu02024]
D PF1709 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PF1708 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PF0062 riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PF0357 dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF1209 oligopeptide ABC transporter (oligopeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF1408 putative dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF0190 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF0191 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF0358 ABC transporter (oppbc family) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF1210 dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF1409 dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF1001 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF0192 hypothetical oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF0359 oligopeptide ABC transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF1211 dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF1410 dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF1000 oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF0193 putative ABC transport ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF0360 oligopeptide ABC transporter (ATP-binding protein) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF1212 putative peptide ABC uptake protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF1411 dipeptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF0194 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF0361 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF1213 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF1412 dipeptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY
D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor
D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D PF1947 hypothetical protein K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pfu01000]
C 01001 Protein kinases [BR:pfu01001]
D PF0473 o-sialoglycoprotein endopeptidase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PF1581 rio1 protein, putative K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PF0364 tyrosine-protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:pfu01009]
D PF0481 translation initiation factor eIF-2, subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2
D PF0343 s-adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PF1921 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pfu01002]
D PF0471 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D PF0975 frxA K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D PF0617 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D PF1299 pyroglutamyl-peptidase i K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D PF1515 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PF1516 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PF0154 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PF0157 glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PF0362 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PF1071 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PF0792 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PF1719 intracellular protease K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27]
D PF2048 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PF0541 methionine aminopeptidase (map) (peptidase m) K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PF0456 carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PF1547 endoglucanase K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D PF1861 endo-1,4-beta-glucanase-like protein K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D PF1135 htpx heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PF1860 hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-]
D PF1833 hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-]
D PF1591 dipeptide transport protein K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D PF2049 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D PF1924 d-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D PF1670 alkaline serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D PF0825 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PF0467 ATP-dependent protease LA (lon) K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D PF0326 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PF0313 signal sequence peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PF1583 protease iv K04773 sppA; protease IV [EC:3.4.21.-]
D PF1571 proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PF0159 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PF1404 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PF0142 asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PF1077 hypothetical protein K03592 pmbA; PmbA protein
D PF1076 TLDD protein homolog K03568 tldD; TldD protein
D PF0160 TLDD protein homolog K03568 tldD; TldD protein
D PF1573 TLDD protein homolog K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:pfu01003]
D PF0394 UDP-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]
D PF0411 protein-export membrane protein K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D PF0156 oligosaccharyl transferase stt3 subunit related protein K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D PF0058 dolichol monophosphate mannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PF0591 hypothetical protein K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pfu01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:pfu01004]
D PF0149 putative alcohol dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PF1540 acetyl coenzyme A synthetase (ADP forming) K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0532 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1838 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF0233 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D PF1837 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D PF1787 acetyl-CoA synthetase K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
C 01008 Polyketide biosynthesis proteins [BR:pfu01008]
D PF0980 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PF1675 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pfu01006]
D PF1102 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
C 01007 Amino acid related enzymes [BR:pfu01007]
D PF0135 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PF0241 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PF1024 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PF1096 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PF0290 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PF0869 aspartyl tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PF0155 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PF1951 partial asparaginyl-tRNA synthetase matches COOH terminus K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PF0264 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PF1204 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PF1293 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PF1351 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PF0270 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0086 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0185 partial alanyl-tRNA synthetase matches COOH terminus half K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0428 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0989 phenylalanyl-tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PF0990 phenylalanyl-tRNA synthetase beta-chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PF1702 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF0522 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PF1497 putative transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PF1253 aspartate transaminase K10907 K10907; aminotransferase [EC:2.6.1.-]
D PF1665 putative histidinol-phosphate aminotransferase (imidazole K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0293 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PF0265 2-amino-3-ketobutyrate CoA ligase (glycine acetyl transferase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PF1685 acetylornithine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D PF1232 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF1421 hypothetical 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D PF0513 putative glutamate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pfu03000]
D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PF1295 transcription initiation factor TFIID (TATA-box factor) chain a (TATA sequence-binding protein) (tbp) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PF1601 transcriptional regulatory protein, asnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PF1543 transcriptional regulatory protein, asnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PF1790 transcriptional regulatory protein arsR family K07721 K07721; ArsR family transcriptional regulator
D PF0601 hypothetical protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D PF0851 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PF1676 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PF0077 biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PF0661 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PF0496 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PF0124 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PF1743 hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PF0535 hypothetical protein K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D PF0644 hypothetical protein K07725 csa3; CRISPR-associated protein Csa3
D PF1851 hypothetical protein K07728 K07728; putative transcriptional regulator
D PF1386 hypothetical protein K07731 K07731; putative transcriptional regulator
D PF0322 hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D PF1338 transcriptional activator, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 03021 Transcription machinery [BR:pfu03021]
D PF1377 transcription initiation factor IIB chain b K03124 TFIIB; transcription initiation factor TFIIB
D PF0687 transcription initiation factor IIB chain b homolog K03124 TFIIB; transcription initiation factor TFIIB
D PF1295 transcription initiation factor TFIID (TATA-box factor) chain a (TATA sequence-binding protein) (tbp) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D PF0491 transcription initiation factor TFIIE K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PF0255 DNA-directed RNA polymerase, subunit e'' K15171 SUPT4H1; transcription elongation factor SPT4
D PF1990 transcription antitermination protein nusG K15172 SUPT5H; transcription elongation factor SPT5
D PF0484 GTP binding protein K24104 GPN; GPN-loop GTPase
D PF1560 transcription termination-antitermination factor nusa K02600 nusA; transcription termination/antitermination protein NusA
D PF1563 DNA-directed RNA polymerase subunit a' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D PF1562 DNA-directed RNA polymerase subunit a K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D PF1564 DNA-directed RNA polymerase subunit b K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D PF1647 DNA-directed RNA polymerase subunit d K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D PF0256 DNA-directed RNA polymerase, subunit e' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D PF1036 hypothetical protein K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D PF1565 DNA-directed RNA polymerase subunit h K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D PF1642 DNA-directed RNA polymerase subunit k K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D PF0050 DNA-directed RNA polymerase subunit l K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D PF1643 DNA-directed RNA polymerase subunit n K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D PF2009 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D PF0986 DNA-directed RNA polymerase subunit m K03057 tfs; transcription factor S
C 03019 Messenger RNA biogenesis [BR:pfu03019]
D PF0255 DNA-directed RNA polymerase, subunit e'' K15171 SUPT4H1; transcription elongation factor SPT4
D PF1990 transcription antitermination protein nusG K15172 SUPT5H; transcription elongation factor SPT5
D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF1379 cell division protein pelota K06965 PELO; protein pelota
D PF1593 peptide chain release factor eRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1
D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha
D PF0052 hypothetical protein K07573 CSL4; exosome complex component CSL4
D PF1569 hypothetical protein K03679 RRP4; exosome complex component RRP4
D PF1568 ribonuclease ph (rph) K11600 RRP41; exosome complex component RRP41
D PF1567 hypothetical protein K12589 RRP42; exosome complex component RRP42
D PF1101 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF0053 putative ATP dependent RNA helicase K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-]
C 03041 Spliceosome [BR:pfu03041]
D PF1060 hypothetical protein K06874 ZPR1; zinc finger protein ZPR1
C 03011 Ribosome [BR:pfu03011]
D PF2054 SSU ribosomal protein S3AE K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D PF1812 SSU ribosomal protein S4E K02987 RP-S4e; small subunit ribosomal protein S4e
D PF0488 SSU ribosomal protein S6E K02991 RP-S6e; small subunit ribosomal protein S6e
D PF1069 SSU ribosomal protein S8E K02995 RP-S8e; small subunit ribosomal protein S8e
D PF1491 SSU ribosomal protein S17E K02962 RP-S17e; small subunit ribosomal protein S17e
D PF1499 SSU ribosomal protein S19E K02966 RP-S19e; small subunit ribosomal protein S19e
D PF0253 SSU ribosomal protein S24E K02974 RP-S24e; small subunit ribosomal protein S24e
D PF0218 SSU ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e
D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PF1368 SSU ribosomal protein S28E K02979 RP-S28e; small subunit ribosomal protein S28e
D PF1824 LSU ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e
D PF1367 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PF1279 LSU ribosomal protein L10 K02866 RP-L10e; large subunit ribosomal protein L10e
D PF0819 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e
D PF0876 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e
D PF1646 LSU ribosomal protein L18E K02883 RP-L18e; large subunit ribosomal protein L18e
D PF1806 LSU ribosomal protein L19E K02885 RP-L19e; large subunit ribosomal protein L19e
D PF1035 LSU ribosomal protein L21E K02889 RP-L21e; large subunit ribosomal protein L21e
D PF1369 LSU ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e
D PF1561 LSU ribosomal protein L30E K02908 RP-L30e; large subunit ribosomal protein L30e
D PF0378 LSU ribosomal protein L31E K02910 RP-L31e; large subunit ribosomal protein L31e
D PF1807 LSU ribosomal protein L32E K02912 RP-L32e; large subunit ribosomal protein L32e
D PF0821 LSU ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e
D PF1872 LSU ribosomal protein L35AE K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D PF1541 LSU ribosomal protein L37E K02922 RP-L37e; large subunit ribosomal protein L37e
D PF2008 LSU ribosomal protein L37AE K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D PF0379 LSU ribosomal protein L39E K02924 RP-L39e; large subunit ribosomal protein L39e
D PF1475 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PF1018 LSU ribosomal protein L41E K02928 RP-L41e; large subunit ribosomal protein L41e
D PF0217 LSU ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e
D PF1640 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PF1819 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PF1649 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PF1804 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PF1558 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PF1809 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PF1644 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PF1376 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PF1648 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PF1559 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PF1650 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D PF1810 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PF2056 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PF1815 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PF1821 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PF1992 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D PF1822 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PF1825 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PF1811 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PF1808 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PF1993 LSU ribosomal protein L10E K02864 RP-L10; large subunit ribosomal protein L10
D PF1991 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PF1645 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PF1814 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PF1802 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PF1805 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PF1820 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PF1823 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PF1813 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PF1818 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PF1803 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D PF1994 LSU ribosomal protein L12A K02869 RP-L12; large subunit ribosomal protein L12
D PF0376 LSU ribosomal protein LXA K02944 RP-LX; large subunit ribosomal protein LX
D PF_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PF_r004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PF_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PF_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pfu03009]
D PF0060 NOP5/NOP56 related protein K14564 NOP56; nucleolar protein 56
D PF1141 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PF2010 hypothetical protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D PF1262 hypothetical protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D PF1580 hypothetical protein K06961 KRR1; ribosomal RNA assembly protein
D PF1581 rio1 protein, putative K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D PF0364 tyrosine-protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D PF1134 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D PF0670 RNase l inhibitor K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D PF1495 GTP-binding protein, gtp1/obg family K06943 NOG1; nucleolar GTP-binding protein
D PF1816 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PF1378 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PF1914 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PF0112 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D PF0377 putative translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D PF1032 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3
D PF1570 hypothetical protein K14574 SDO1; ribosome maturation protein SDO1
D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF1940 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D PF0397 GTP-binding protein homologue K03595 era; GTPase
D PF0059 fibrillarin-like pre-rRNA processing protein K04795 flpA; fibrillarin-like pre-rRNA processing protein
D PF1367 LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D PF1791 small nucleolar rnp gar1-like protein K07569 gar1; RNA-binding protein
D PF1560 transcription termination-antitermination factor nusa K02600 nusA; transcription termination/antitermination protein NusA
D PF1863 dimethyladenosine transferase (s-adenosylmethionine-6-n' K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PF1265 putative nucleolar protein II (nol1-nop2-sun family) K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PF0251 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PF0827 putative RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D PF0267 ribosomal protein s18 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PF0002 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PF1177 GTP-binding protein, gtp1/obg family K03665 hflX; GTPase
D PF0306 sua5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PF1498 hypothetical protein K07574 yhbY; RNA-binding protein
D PF0374 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D PF0022 putative RNase E K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-]
C 03016 Transfer RNA biogenesis [BR:pfu03016]
D PF1816 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PF1378 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PF1914 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PF1613 hypothetical protein K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D PF1345 arylsulfatase, putative K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PF1615 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PF1552 hypothetical protein K24956 ZBTB8OS; protein archease
D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha
D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PF1293 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PF1096 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PF1030 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PF0869 aspartyl tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PF0270 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0086 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0185 partial alanyl-tRNA synthetase matches COOH terminus half K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0428 partial alanyl-tRNA synthetase matches COOH terminus K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PF0155 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PF1951 partial asparaginyl-tRNA synthetase matches COOH terminus K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PF1351 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PF1204 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PF1024 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PF0290 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PF0264 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PF0989 phenylalanyl-tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PF0990 phenylalanyl-tRNA synthetase beta-chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PF0241 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PF1982 hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PF1912 hypothetical protein K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D PF1871 tRNA (guanine-26,n2-n2) methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D PF0169 putative nucleolar protein III (nol1-nop2-sun family) K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D PF0089 met-10+ protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PF1415 met-10+ protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PF1896 l-isoaspartyl protein carboxyl methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PF1718 hypothetical protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D PF0500 met-10+ protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D PF1098 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PF2034 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D PF0918 putative tRNA pseudouridine synthase a K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PF1785 centromere binding protein homolog/pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PF1555 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PF1139 hypothetical protein K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D PF0473 o-sialoglycoprotein endopeptidase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D PF0172 o-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D PF1901 oxygen-independent coproporphyrinogen III oxidase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D PF0306 sua5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PF1925 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1
D PF1958 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1
D PF_s004 RNase P RNA K01978 rnpB; M1 RNA
D PF1880 mRNA 3'-end processing factor homolog K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D PF0026 tRNA nucleotidyltransferase (cca) K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D PF0266 putative tRNA-intron endonuclease K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D PF0027 putative integral membrane transport protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PF0083 hypothetical protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D PF0135 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PF1172 RNA methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PF1403 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D PF1257 putative nucleolar protein III (nol1-nop2-sun family) K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
D PF0678 hypothetical protein K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221]
D PF1002 hypothetical protein K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D PF0400 hypothetical protein K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D PF0461 hypothetical protein K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D PF1553 putative nucleolar protein I (nol1-nop2-sun family) K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D PF0273 n-type ATP pyrophosphatase superfamily K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D PF0523 hypothetical protein K09119 cgi121; KEOPS complex subunit Cgi121
D PF2011 hypothetical protein K09741 pcc1; KEOPS complex subunit Pcc1
D PF0048 succinoglycan biosynthesis regulator K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PF0219 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PF1277 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PF1046 queuine trna-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D PF1288 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1487 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1835 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PF1855 putative transcription-associated protein TFIIS K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D PF0504 DNA helicase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
C 03012 Translation factors [BR:pfu03012]
D PF1582 translation initiation factor eIF-1a K03236 EIF1A; translation initiation factor 1A
D PF1817 protein translation factor sui1 homolog K03113 EIF1; translation initiation factor 1
D PF1140 translation initiation factor eIF-2, subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1
D PF0481 translation initiation factor eIF-2, subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2
D PF1717 translation initiation factor eIF-2, subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3
D PF0475 translation initiation factor eIF-2b, subunit delta K03680 EIF2B4; translation initiation factor eIF-2B subunit delta
D PF1264 translation initiation factor eIF-5a K03263 EIF5A; translation initiation factor 5A
D PF1137 translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B
D PF0377 putative translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha
D PF1965 elongation factor 1-beta (EF-1-beta) K03232 EEF1B; elongation factor 1-beta
D PF2012 elongation factor 2 (EF-2) K03234 EEF2; elongation factor 2
D PF1063 hypothetical protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D PF0828 n-type ATP pyrophosphatase superfamily K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D PF1593 peptide chain release factor eRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1
D PF1673 protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PF1556 hypothetical protein K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C 03110 Chaperones and folding catalysts [BR:pfu03110]
D PF1974 thermosome, single subunit K22447 cct; archaeal chaperonin
D PF1883 small heat shock protein K13993 HSP20; HSP20 family protein
D PF0375 hypothetical protein K04797 pfdA; prefoldin alpha subunit
D PF0382 hypothetical protein K04798 pfdB; prefoldin beta subunit
D PF0615 hydrogenase expression/formation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D PF1401 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
C 04131 Membrane trafficking [BR:pfu04131]
D PF0931 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF1989 protein transport protein sec61 gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha
C 04121 Ubiquitin system [BR:pfu04121]
D PF1475 LSU ribosomal protein L40E K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
C 03051 Proteasome [BR:pfu03051]
D PF1571 proteasome, subunit alpha (multicatalytic endopeptidase complex alpha subunit) K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PF0159 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PF1404 proteasome, subunit beta (multicatalytic endopeptidase complex beta subunit) K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PF0115 ATP-dependent 26S protease regulatory subunit K03420 psmR; proteasome regulatory subunit
C 03032 DNA replication proteins [BR:pfu03032]
D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen
D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PF1141 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D PF1725 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D PF0017 origin recognition protein subunit 1 K10725 cdc6A; archaeal cell division control protein 6
D PF0482 cell division control protein 21 K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D PF0110 DNA primase, putative K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D PF0111 hypothetical protein K18882 priL; DNA primase large subunit
D PF0982 hypothetical protein K09723 ginS; DNA replication factor GINS
D PF0483 hypothetical protein K09723 ginS; DNA replication factor GINS
D PF1781 RNaseH II K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PF0212 DNA-directed DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D PF0019 DNA polymerase II subunit 2 K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D PF0018 DNA polymerase II subunit 1 K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D PF0092 replication factor C, large subunit K04800 rfcL; replication factor C large subunit
D PF0093 replication factor C, small subunit K04801 rfcS; replication factor C small subunit
D PF1578 type II DNA topoisomerase subunit a K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D PF1579 DNA topoisomerase VI, subunit b K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D PF0494 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PF0495 reverse gyrase (rgy) K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:pfu03036]
D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PF1826 hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D PF1722 archaeal histone a2 K24450 hmf; DNA-binding protein
D PF1831 archaeal histone a1 K24450 hmf; DNA-binding protein
D PF1843 chromosome segregation protein smc K03529 smc; chromosome segregation protein
D PF1842 hypothetical protein K05896 scpA; segregation and condensation protein A
D PF2021 hypothetical protein K06024 scpB; segregation and condensation protein B
D PF1988 cell division protein ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PF0525 cell division protein K03531 ftsZ; cell division protein FtsZ
D PF1611 cell division inhibitor minD K03609 minD; septum site-determining protein MinD
D PF0485 cell division inhibitor minD homolog K03609 minD; septum site-determining protein MinD
D PF0526 soj homolog K03496 parA; chromosome partitioning protein
D PF1868 integrase-recombinase protein K04763 xerD; integrase/recombinase XerD
D PF0616 nucleotide-binding protein (mrp/nbp35 family) K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:pfu03400]
D PF1878 methylated DNA protein cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PF1229 glycosylase putative; mutY-nth family K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PF0983 pcna sliding clamp (proliferating-cell nuclear antigen) K04802 PCNA; proliferating cell nuclear antigen
D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PF1635 DNA ligase (lig) K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D PF0933 DNA repair helicase rad3, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PF1590 mutt putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PF1385 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PF0511 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PF0258 putative endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PF0987 hypothetical protein K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PF2055 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PF0474 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D PF1167 smc-like protein K03546 sbcC; DNA repair protein SbcC/Rad50
D PF1166 exonuclease putative K03547 sbcD; DNA repair protein SbcD/Mre11
D PF1118 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D PF1926 recombinase, radA K04483 radA; DNA repair protein RadA
D PF0021 recombinase K04484 radB; DNA repair protein RadB
D PF1503 hypothetical protein K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D PF1165 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PF1168 hypothetical protein K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-]
D PF0677 helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D PF0494 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PF1051 large helicase-related protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PF1504 large helicase-related protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PF0440 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PF1892 hypothetical protein K22585 nreA; DNA repair protein NreA
C 03029 Mitochondrial biogenesis [BR:pfu03029]
D PF1816 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D PF1378 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D PF1914 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PF0397 GTP-binding protein homologue K03595 era; GTPase
D PF0862 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PF0890 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PF1627 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PF1380 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PF0616 nucleotide-binding protein (mrp/nbp35 family) K03593 mrp; ATP-binding protein involved in chromosome partitioning
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pfu02000]
D PF1654 ABC transporter (ATP-binding protein)-like protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PF1655 ABC transporter (ATP-binding protein)-like protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PF0744 ABC transporter (msbA subfamily) K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PF0080 hypothetical protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D PF0081 sulfate/thiosulfate transport protein homolog cyst K15496 wtpB; molybdate/tungstate transport system permease protein
D PF0082 membrane protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D PF1518 thiamin-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D PF1751 putative solute binding lipoprotein K02064 thiB; thiamine transport system substrate-binding protein
D PF1520 ABC transporter integral membrane protein K02063 thiP; thiamine transport system permease protein
D PF1748 putative sulfate transport system permease protein, ABC transporter K02063 thiP; thiamine transport system permease protein
D PF1749 putative sulfate transport integral membrane protein K02063 thiP; thiamine transport system permease protein
D PF1519 sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PF1750 putative sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PF1933 putative sugar transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PF1744 trehalose/maltose transport ATP-hydrolyzing K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PF1970 putative multiple sugar-binding transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PF1938 putative sugar binding protein (malE-like) K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PF1937 putative sugar transport inner membrane protein (malf-like) K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PF1936 putative sugar transport inner membrane protein (malg-like) K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PF1739 trehalose/maltose binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PF1740 trehalose/maltose transport inner membrane protein K10237 thuF; trehalose/maltose transport system permease protein
D PF1741 trehalose/maltose transport inner membrane protein K10238 thuG; trehalose/maltose transport system permease protein
D PF0119 putative perplasmic sugar binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D PF0118 putative ABC transporter permease protein K17238 inoF; inositol-phosphate transport system permease protein
D PF0117 putative sugar transport protein K17239 inoG; inositol-phosphate transport system permease protein
D PF0116 putative multiple sugar transport protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D PF1695 hypothetical lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PF1697 putative ribose/galactose ABC transporter K23535 nupB; general nucleoside transport system permease protein
D PF1698 putative ribose ABC transporter K23536 nupC; general nucleoside transport system permease protein
D PF1696 putative ABC sugar transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D PF1967 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PF1968 sugar transport membrane protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PF1969 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PF1003 phosphate-binding periplasmic protein precursor (pbp) K02040 pstS; phosphate transport system substrate-binding protein
D PF1006 putative phosphate transport system permease protein C K02037 pstC; phosphate transport system permease protein
D PF1007 phosphate transport system permease psta K02038 pstA; phosphate transport system permease protein
D PF1008 putative ABC transport protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PF0357 dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF1209 oligopeptide ABC transporter (oligopeptide-binding protein) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF1408 putative dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF0190 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PF0191 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF0358 ABC transporter (oppbc family) K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF1210 dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF1409 dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF1001 oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PF0192 hypothetical oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF0359 oligopeptide ABC transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF1211 dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF1410 dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF1000 oligopeptide transport system permease protein appc K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PF0193 putative ABC transport ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF0360 oligopeptide ABC transporter (ATP-binding protein) K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF1212 putative peptide ABC uptake protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF1411 dipeptide transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PF0194 dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF0361 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF1213 oligopeptide ABC transporter (ATP-binding protein) K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF1412 dipeptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PF0911 iron (III) ABC transporter, ATP-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PF0910 iron (III) ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PF0909 ferric enterobactin transport ATP-binding protein homolog K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PF1774 iron (III) ABC transporter, ATP-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PF0503 putative iron ABC transporter K25027 btuC; cobalamin transport system permease protein
D PF0502 iron(III) dicitrate transport system permease protein fece K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PF0530 hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D PF0529 hypothetical protein K02008 cbiQ; cobalt/nickel transport system permease protein
D PF0531 cobalamin biosynthesis protein m K02007 cbiM; cobalt/nickel transport system permease protein
D PF0528 cobalt transport ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PF1677 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PF0067 cobalt transport ABC transporter, integral membrane component K16785 ecfT; energy-coupling factor transport system permease protein
D PF1857 cobalt transport ATP-binding protein cbio K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PF0068 cobalt transport ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PF0373 putative ABC transporter, periplasmic binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PF1780 putative ABC transporter (ATP-binding protein) K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PF1779 putative ABC transporter (ATP-binding protein) K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PF0579 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein
D PF0578 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein
D PF0577 ATP-binding transport protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D PF1247 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0922 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0883 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0278 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0834 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF1252 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF1012 putative ABC transporter (ATP-binding protein) K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF2061 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0309 ABC transporter (membrane protein) K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0036 daunorubicin resistance membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0582 daunorubicin resistance membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF1887 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF1888 conserved membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PF0279 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1249 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0905 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1468 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0921 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0895 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1090 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0881 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0733 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0732 daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0035 daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0006 ABC transporter (ATP-binding) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0005 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0835 daunorubicin resistance ATP-binding protein drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1522 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1467 putative ABC transporter (ATP-binding protein) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0310 daunorubicin resistance ATP-binding protein homolog drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF0583 daunorubicin resistance ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1011 daunorubicin resistance ATP-binding protein drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1889 daunorubicin resistance ATP-binding protein drrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PF1287 putative ABC transporter (ATP-binding protein) K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PF1850 damage-inducible protein (dinF homolog) K26939 norM; MATE family, multidrug efflux pump
D PF0824 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D PF0823 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D PF0708 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D PF1157 hypothetical protein K07244 K07244; mgtE-like transporter
D PF2036 magnesium and cobalt transporter K03284 corA; magnesium transporter
D PF1235 hypothetical protein K06199 crcB; fluoride exporter
D PF1844 hypothetical protein K06518 cidA; holin-like protein
D PF0558 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PF0746 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D PF0486 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family
D PF1671 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family
D PF0350 putative cation antiporter K07301 yrbG; cation:H+ antiporter
D PF0275 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D PF0268 Na+/H+ antiporter homolog K26730 napA; Na+:H+ antiporter
D PF1603 hypothetical na antiporter K26730 napA; Na+:H+ antiporter
D PF1164 putative Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D PF1856 trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PF0175 trk system potassium uptake protein a homolog K03499 trkA; trk/ktr system potassium uptake protein
D PF0852 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D PF0552 arsenical-resistance protein acr3 K03325 ACR3; arsenite transporter
D PF1450 hypothetical protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D PF1449 hypothetical protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PF1428 hypothetical protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PF1150 putative multisubunit Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PF1149 putative multisubunit Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D PF1429 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PF1148 putative multisubunit Na+/H+ antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PF1448 hypothetical protein K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D PF1430 mbh8 NADH dehydrogenase subunit - integral membrane protein (like CooM) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PF1147 putative multisubunit Na+/H+ antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D PF1453 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PF1423 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PF1153 putative multisubunit Na+/H+ antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D PF1452 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PF1424 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PF1152 putative multisubunit Na+/H+ antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D PF1451 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PF1425 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PF1151 putative multisubunit Na+/H+ antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D PF0449 hypothetical protein K24180 mleP; malate permease and related proteins
D PF1325 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D PF0130 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D PF0723 hypothetical protein K07243 FTR; high-affinity iron transporter
D PF0674 ion gradient-generating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PF0671 methylmalonyl-CoAdecarboxylase, subunit alpha K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PF0673 methylmalonyl-CoAdecarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PF0672 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D PF0858 hypothetical protein K04758 feoA; ferrous iron transport protein A
D PF0857 ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:pfu02044]
D PF0337 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB
D PF0338 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB
D PF0336 hypothetical protein K07822 flaC; archaeal flagellar protein FlaC
D PF0335 flagella-related protein d, putative K07327 flaD; archaeal flagellar protein FlaD
D PF0334 putative flagella-related protein K07329 flaF; archaeal flagellar protein FlaF
D PF0333 putative flagella-related protein g K07330 flaG; archaeal flagellar protein FlaG
D PF0332 putative flagella-related protein h K07331 flaH; archaeal flagellar protein FlaH
D PF0331 putative type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI
D PF0994 type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI
D PF0330 flagella accessory protein K07333 flaJ; archaeal flagellar protein FlaJ
D PF0993 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D PF0471 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D PF1598 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PF0174 protein export membrane protein K03072 secD; preprotein translocase subunit SecD
D PF0173 protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D PF2017 hypothetical protein K22228 secG; preprotein translocase subunit SecG
D PF1801 preprotein translocase K03076 secY; preprotein translocase subunit SecY
D PF1731 signal recognition particle protein srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PF1766 signal recognition particle receptor (dpa) K03110 ftsY; fused signal recognition particle receptor
D PF1989 protein transport protein sec61 gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D PF1894 hypothetical protein K03105 SRP19; signal recognition particle subunit SRP19
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins [BR:pfu02035]
D PF0337 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB
D PF0338 flagellin b2 precursor K07325 flaB; archaeal flagellin FlaB
D PF0336 hypothetical protein K07822 flaC; archaeal flagellar protein FlaC
D PF0335 flagella-related protein d, putative K07327 flaD; archaeal flagellar protein FlaD
D PF0334 putative flagella-related protein K07329 flaF; archaeal flagellar protein FlaF
D PF0333 putative flagella-related protein g K07330 flaG; archaeal flagellar protein FlaG
D PF0332 putative flagella-related protein h K07331 flaH; archaeal flagellar protein FlaH
D PF0331 putative type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI
D PF0994 type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI
D PF0330 flagella accessory protein K07333 flaJ; archaeal flagellar protein FlaJ
D PF0993 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D PF0471 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pfu04812]
D PF1638 hypothetical protein K06990 MEMO1; MEMO1 family protein
D PF1988 cell division protein ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PF0525 cell division protein K03531 ftsZ; cell division protein FtsZ
D PF1507 cell division protein ftsZ homolog K22222 cetZ; tubulin-like protein CetZ
D PF1611 cell division inhibitor minD K03609 minD; septum site-determining protein MinD
D PF0485 cell division inhibitor minD homolog K03609 minD; septum site-determining protein MinD
D PF0526 soj homolog K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:pfu04147]
D PF0215 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1641 enolase (2-phosphoglycerate dehydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PF1057 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PF1188 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PF1033 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PF1375 translation elongation factor eF-1, subunit alpha (tuf) K03231 EEF1A; elongation factor 1-alpha
D PF2012 elongation factor 2 (EF-2) K03234 EEF2; elongation factor 2
D PF1414 flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D PF0285 inosine-5'-monophosphate dehydrogenase (imp dehydrogenase) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PF0252 SSU ribosomal protein S27AE K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D PF1882 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF0963 cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D PF0973 acetyl CoA synthase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PF0343 s-adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PF1800 adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PF1045 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3]
D PF0208 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PF0207 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PF0445 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PF2004 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PF0450 glutamine synthetase i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PF1394 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PF1602 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PF1920 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pfu02048]
D PF1118 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D PF1117 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D PF1120 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PF0640 ATP-dependent RNA helicase, putative K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PF0639 hypothetical protein K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-]
D PF0644 hypothetical protein K07725 csa3; CRISPR-associated protein Csa3
D PF0637 hypothetical protein K19086 csa4; CRISPR-associated protein Csa4
D PF0638 hypothetical protein K19086 csa4; CRISPR-associated protein Csa4
D PF0643 hypothetical protein K19087 csa5; CRISPR-associated protein Csa5
D PF1123 hypothetical protein K19088 cst1; CRISPR-associated protein Cst1
D PF0642 hypothetical protein K19075 cst2; CRISPR-associated protein Cst2
D PF1122 hypothetical protein K19075 cst2; CRISPR-associated protein Cst2
D PF1119 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PF1793 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D PF0641 hypothetical protein K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c
D PF1121 hypothetical protein K19090 cas5t; CRISPR-associated protein Cas5t
D PF0393 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D PF1131 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D PF1130 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1
D PF0352 hypothetical protein K07061 cmr1; CRISPR-associated protein Cmr1
D PF1129 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2
D PF1128 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3
D PF1126 hypothetical protein K09000 cmr4; CRISPR-associated protein Cmr4
D PF1125 hypothetical protein K19141 cmr5; CRISPR-associated protein Cmr5
D PF1124 hypothetical protein K19142 cmr6; CRISPR-associated protein Cmr6
D PF1127 hypothetical protein K19143 csx1; CRISPR-associated protein Csx1
D PF0049 site-specific DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PF1988 cell division protein ftsZ homolog K03531 ftsZ; cell division protein FtsZ
D PF0525 cell division protein K03531 ftsZ; cell division protein FtsZ
D PF1753 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PF1205 hypothetical protein K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pfu00537]
D PF1004 alkaline phosphatase IV precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pfu03100]
D PF_t018 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PF_t020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PF_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PF_t004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PF_t027 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PF_t041 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PF_t031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PF_t008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PF_t011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PF_t006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PF_t015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PF_t001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PF_t024 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PF_t010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PF_t046 tRNA-His K14226 tRNA-His; tRNA His
D PF_t016 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PF_t034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PF_t030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PF_t012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PF_t026 tRNA-Met K14230 tRNA-Met; tRNA Met
D PF_t005 tRNA-Met K14230 tRNA-Met; tRNA Met
D PF_t029 tRNA-Met K14230 tRNA-Met; tRNA Met
D PF_t002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PF_t038 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PF_t036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PF_t044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PF_t028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PF_t035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PF_t033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PF_t037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PF_t022 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PF_t023 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PF_t042 tRNA-Val K14237 tRNA-Val; tRNA Val
D PF_t021 tRNA-Val K14237 tRNA-Val; tRNA Val
D PF_t043 tRNA-Val K14237 tRNA-Val; tRNA Val
D PF_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PF_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PF_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PF_r004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PF_s002 signal recognition particle; structural RNA K01983 ffs; SRP RNA
D PF_s004 RNase P RNA K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PF0766 putative dehydrogenase K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374]
D PF0533 indolepyruvate ferredoxin oxidoreductase subunit a K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D PF0845 2-keto acid:ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D PF0139 2-keto acid:ferredoxin oxidoreductase subunit gamma K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D PF0534 indolepyruvate ferredoxin oxidoreductase subunit b K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D PF1532 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D PF1186 NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D PF1327 glutamate synthase [NADPH] small chain K20202 sudA; sulfide dehydrogenase subunit alpha [EC:1.8.1.19]
D PF1328 hydrogenase subunit gamma K20203 sudB; sulfide dehydrogenase subunit beta [EC:1.8.1.19]
D PF0722 alkyl hydroperoxide reductase subunit c K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PF1434 mbh12 membrane bound hydrogenase alpha (NADH dehydrogenase) K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2]
D PF1433 mbh11 membrane bound hydrogenase beta (NADH dehydrogenase) K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2]
D PF1432 mbh10 NADH dehydrogenase subunit (like cCoL, EchC, HycH) K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D PF1281 superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D PF0742 putative ferritin homolog K02217 ftnA; ferritin [EC:1.16.3.2]
D PF1911 putative hydrogenase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PF0553 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PF1454 hypothetical protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D PF1972 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PF0631 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PF1397 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PF1049 hypothetical protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PF1922 l-isoaspartyl protein carboxyl methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PF0595 hydrogenase expression/formation protein K20215 dph5; diphthine synthase [EC:2.1.1.98]
D PF1132 putative carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D PF1916 hypothetical protein K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D PF0292 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PF1111 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D PF0071 hypothetical protein K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-]
D PF2033 hypothetical protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]
D PF0078 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D PF0866 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PF0462 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D PF1587 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D PF0859 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PF1298 putative endonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D PF0012 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D PF0354 hypothetical protein K22408 dac; N,N'-diacetylchitobiose non-reducing end deacetylase [EC:3.5.1.136]
D PF0668 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PF0517 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PF0804 methanol dehydrogenase regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PF0418 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PF0405 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PF0459 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D PF0200 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PF0904 hypothetical protein K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18]
D PF1549 RNA-3'-phosphate cyclase K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5]
D PF0079 cyclic 2,3-diphospoglycerate-synthetase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9]
D PF0353 hypothetical protein K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
C 99981 Carbohydrate metabolism
D PF1198 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D PF1909 ferredoxin K05337 fer; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D PF0170 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PF1954 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PF0512 hypothetical protein K03627 MBF1; putative transcription factor
D PF1881 hypothetical protein K03622 ssh10b; archaea-specific DNA-binding protein
D PF1542 small nuclear ribonucleoprotein, putative K04796 RUXX; small nuclear ribonucleoprotein
D PF0610 hypothetical protein K07743 K07743; transcriptional regulator
D PF1932 hypothetical protein K07745 K07745; transcriptional regulator
C 99974 Translation
D PF1862 DNA-binding protein K07572 K07572; putative nucleotide binding protein
D PF0596 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
D PF0537 hypothetical protein K07578 K07578; homologs of the eukaryotic argonaute protein
D PF0211 hypothetical protein K07579 K07579; putative methylase
D PF1964 hypothetical protein K07580 K07580; Zn-ribbon RNA-binding protein
D PF1913 hypothetical protein K07581 K07581; RNA-binding protein
D PF1945 n-type ATP pyrophosphatase superfamily K07585 K07585; tRNA methyltransferase
C 99975 Protein processing
D PF0548 hydrogenase expression/formation protein K04653 hypC; hydrogenase expression/formation protein HypC
D PF0549 hydrogenase expression/formation protein K04654 hypD; hydrogenase expression/formation protein HypD
D PF0604 hydrogenase expression/formation protein K04655 hypE; hydrogenase expression/formation protein HypE
D PF0559 hydrogenase expression/formation regulatory protein K04656 hypF; hydrogenase maturation protein HypF
D PF1388 hypothetical protein K07397 yhfA; putative redox protein
D PF1533 nodulation protein nfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D PF0567 hypothetical protein K07445 K07445; putative DNA methylase
D PF2023 DNA invertase K07450 K07450; putative resolvase
D PF0399 member of s1p family of ribosomal proteins K07463 K07463; archaea-specific RecJ-like exonuclease
D PF1847 tbp-interacting protein tip49 K07472 TIP49; TBP-interacting protein
D PF0985 hypothetical protein K07477 K07477; translin
D PF0286 hypothetical protein K07500 K07500; DNA endonuclease
D PF1918 hypothetical protein K07496 K07496; putative transposase
D PF2024 transposase K07496 K07496; putative transposase
D PF0760 hypothetical protein K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D PF0685 hypothetical protein K07504 K07504; predicted type IV restriction endonuclease
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PF1020 putative phosphate transport protein pitb K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PF1178 putative na-dependant transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PF0429 putative proline permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D PF0371 putative transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PF0514 d-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D PF1633 hypothetical protein K06384 spoIIM; stage II sporulation protein M
C 99993 Cell motility
C 99995 Signaling proteins
D PF1473 hypothetical protein K07176 K07176; putative serine/threonine protein kinase
D PF0625 hypothetical protein K08482 kaiC; circadian clock protein KaiC
D PF1087 hypothetical protein K06875 PDCD5; programmed cell death protein 5
C 99992 Structural proteins
C 99994 Others
D PF1010 phosphate ABC transporter, regulatory protein K02039 phoU; phosphate transport system protein
D PF1009 hypothetical protein K02039 phoU; phosphate transport system protein
D PF1031 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PF1490 hypothetical protein K04477 ycdX; putative hydrolase
D PF1041 hypothetical protein K06865 K06865; ATPase
D PF0592 ATP-dependent RNA helicase, putative K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PF1667 partial methionyl-tRNA synthetase - matches COOH terminus K06878 K06878; tRNA-binding protein
D PF1777 hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D PF0222 hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D PF1161 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D PF0165 hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D PF1286 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D PF0129 hypothetical protein K07038 K07038; inner membrane protein
D PF0908 hypothetical protein K07049 K07049; TatD-related deoxyribonuclease
D PF0498 hypothetical protein K07143 K07143; UPF0148 protein
D PF0106 hypothetical protein K08971 K08971; putative membrane protein
D PF0260 hypothetical protein K08975 K08975; putative membrane protein
D PF0737 hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D PF0015 hypothetical protein K06869 K06869; uncharacterized protein
D PF1438 hypothetical protein K06870 K06870; uncharacterized protein
D PF2064 arylsulfatase regulatory protein, putative K06871 K06871; uncharacterized protein
D PF1829 nucleotidyltransferase K06885 K06885; uncharacterized protein
D PF0635 DEXX-box atpase K06921 K06921; uncharacterized protein
D PF0435 DEXX-box atpase K06921 K06921; uncharacterized protein
D PF0304 DEXX-box atpase K06921 K06921; uncharacterized protein
D PF1097 hypothetical protein K06921 K06921; uncharacterized protein
D PF0634 DEXX-box atpase K06921 K06921; uncharacterized protein
D PF0764 DEXX-box atpase K06921 K06921; uncharacterized protein
D PF0636 DEXX-box atpase K06921 K06921; uncharacterized protein
D PF0566 hypothetical protein K06922 K06922; uncharacterized protein
D PF0725 hypothetical protein K06929 K06929; uncharacterized protein
D PF0620 hypothetical protein K06933 K06933; uncharacterized protein
D PF0619 hypothetical protein K06934 K06934; uncharacterized protein
D PF1628 hypothetical protein K06935 K06935; uncharacterized protein
D PF1733 hypothetical protein K06940 K06940; uncharacterized protein
D PF1898 hypothetical protein K06940 K06940; uncharacterized protein
D PF0224 hypothetical protein K06950 K06950; uncharacterized protein
D PF1019 hypothetical protein K06953 K06953; uncharacterized protein
D PF1484 hypothetical protein K06953 K06953; uncharacterized protein
D PF0860 btpA family protein K06971 K06971; uncharacterized protein
D PF0875 hypothetical protein K06983 K06983; uncharacterized protein
D PF0262 mfs transporter K07003 K07003; uncharacterized protein
D PF1043 hypothetical protein K07013 K07013; uncharacterized protein
D PF0593 hypothetical protein K07022 K07022; uncharacterized protein
D PF1285 hypothetical protein K07033 K07033; uncharacterized protein
D PF1405 cleavage and polyadenylation specifity factor protein K07041 K07041; uncharacterized protein
D PF0042 metal-dependent hydrolase K07045 K07045; uncharacterized protein
D PF0812 hypothetical protein K07064 K07064; uncharacterized protein
D PF0574 hypothetical protein K07064 K07064; uncharacterized protein
D PF0575 hypothetical protein K07064 K07064; uncharacterized protein
D PF0974 hypothetical protein K07068 K07068; uncharacterized protein
D PF1981 hypothetical protein K07073 K07073; uncharacterized protein
D PF0906 hypothetical protein K07087 K07087; uncharacterized protein
D PF0368 hypothetical protein K07090 K07090; uncharacterized protein
D PF1075 hypothetical protein K07090 K07090; uncharacterized protein
D PF1792 5'-cyclic-nucleotide phosphodiesterase cpda homolog K07095 K07095; uncharacterized protein
D PF1550 hypothetical protein K07095 K07095; uncharacterized protein
D PF0282 hypothetical protein K07096 K07096; uncharacterized protein
D PF1950 xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PF0039 xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D PF1572 hypothetical protein K07103 K07103; uncharacterized protein
D PF0284 hypothetical protein K07103 K07103; uncharacterized protein
D PF0691 hypothetical protein K07108 K07108; uncharacterized protein
D PF0978 hypothetical protein K07111 K07111; uncharacterized protein
D PF1496 hypothetical protein K07111 K07111; uncharacterized protein
D PF1238 putative ABC transporter (ATP-binding protein) K07128 K07128; uncharacterized protein
D PF0850 hypothetical protein K07129 K07129; uncharacterized protein
D PF0585 DEXX-box atpase K07133 K07133; uncharacterized protein
D PF1321 DEXX-box atpase K07133 K07133; uncharacterized protein
D PF0652 DEXX-box atpase K07133 K07133; uncharacterized protein
D PF0243 DEXX-box atpase K07133 K07133; uncharacterized protein
D PF0214 n-type ATP pyrophosphatase K07134 K07134; uncharacterized protein
D PF0386 hypothetical protein K07135 K07135; uncharacterized protein
D PF0276 oxidoreductase K07137 K07137; uncharacterized protein
D PF1716 hypothetical protein K07158 K07158; uncharacterized protein
D PF0927 hypothetical protein K07158 K07158; uncharacterized protein
D PF1142 hypothetical protein K07159 K07159; uncharacterized protein
D PF0611 hypothetical protein K09003 K09003; uncharacterized protein
D PF1050 hypothetical protein K09005 K09005; uncharacterized protein
D PF2042 hypothetical protein K09120 K09120; uncharacterized protein
D PF0603 hypothetical protein K09122 K09122; uncharacterized protein
D PF0248 hypothetical protein K09129 K09129; uncharacterized protein
D PF1488 hypothetical protein K09130 K09130; uncharacterized protein
D PF1765 hypothetical protein K09131 K09131; uncharacterized protein
D PF0014 hypothetical protein K09135 K09135; uncharacterized protein
D PF1236 hypothetical protein K09137 K09137; uncharacterized protein
D PF0133 hypothetical protein K09139 K09139; uncharacterized protein
D PF1979 hypothetical protein K09141 K09141; uncharacterized protein
D PF1626 hypothetical protein K09145 K09145; uncharacterized protein
D PF1275 hypothetical protein K09148 K09148; uncharacterized protein
D PF0413 hypothetical protein K09149 K09149; uncharacterized protein
D PF0493 hypothetical protein K09150 K09150; uncharacterized protein
D PF1828 hypothetical protein K09152 K09152; uncharacterized protein
D PF1501 hypothetical protein K09154 K09154; uncharacterized protein
D PF0695 hypothetical protein K09155 K09155; uncharacterized protein
D PF0920 nucleotidyltransferase K09163 K09163; uncharacterized protein
D PF0123 putative methyltransferase K09713 K09713; uncharacterized protein
D PF1300 hypothetical protein K09715 K09715; uncharacterized protein
D PF1418 hypothetical protein K09719 K09719; uncharacterized protein
D PF0239 hypothetical protein K09721 K09721; uncharacterized protein
D PF1577 hypothetical protein K09724 K09724; uncharacterized protein
D PF0315 hypothetical protein K09725 K09725; uncharacterized protein
D PF1632 hypothetical protein K09726 K09726; uncharacterized protein
D PF1625 hypothetical protein K09727 K09727; uncharacterized protein
D PF1485 hypothetical protein K09728 K09728; uncharacterized protein
D PF1381 hypothetical protein K09730 K09730; uncharacterized protein
D PF1486 hypothetical protein K09731 K09731; uncharacterized protein
D PF0231 hypothetical protein K09732 K09732; uncharacterized protein
D PF1297 hypothetical protein K09736 K09736; uncharacterized protein
D PF0452 hypothetical protein K09737 K09737; uncharacterized protein
D PF1086 hypothetical protein K09738 K09738; uncharacterized protein
D PF0051 hypothetical protein K09742 K09742; uncharacterized protein
D PF1903 putative translation initiation factor (IF-2 homolog) K09744 K09744; uncharacterized protein
D PF0340 putative HTH transcription regulator K09745 K09745; uncharacterized protein
D PF2018 hypothetical protein K09746 K09746; uncharacterized protein
D PF1395 hypothetical protein K07220 K07220; uncharacterized protein
D PF1021 hypothetical protein K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024