+D GENES KO
#
KEGG Orthology (KO) - Phaeobacter inhibens DSM 17395
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pga00010]
D PGA1_c05420 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D PGA1_c27980 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PGA1_c08640 glpX; fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c07220 putative 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PGA1_c20650 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PGA1_c05510 gapA; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c17250 gapB; glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c27490 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c17530 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PGA1_c02770 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PGA1_c11420 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PGA1_c06970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PGA1_c06510 ppdK; pyruvate, phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PGA1_c16590 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c19410 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c17550 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PGA1_c17560 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PGA1_c17570 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_262p00390 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c01140 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:pga00020]
D PGA1_c16970 gltA1; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D PGA1_c28860 gltA2; citrate synthase GltA K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PGA1_c18830 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PGA1_c28340 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PGA1_c03600 sucA; 2-oxoglutarate dehydrogenase E1 component SucA K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PGA1_c03590 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03610 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PGA1_c03630 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PGA1_c03760 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PGA1_c03780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PGA1_c03740 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PGA1_c03750 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PGA1_c13520 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PGA1_c09420 pyc; pyruvate carboxylase Pyc K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PGA1_c01140 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PGA1_c16590 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c19410 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c17550 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PGA1_c17560 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PGA1_c17570 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pga00030]
D PGA1_c27980 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PGA1_c15160 zwf1; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PGA1_c27990 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PGA1_c15170 pgl; 6-phosphogluconolactonase Pgl K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PGA1_c04170 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PGA1_c17230 tktA; transketolase TktA K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PGA1_c05780 tal; transaldolase Tal K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PGA1_c23740 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PGA1_c10730 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PGA1_c32790 putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PGA1_c34980 putative pfkB family carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PGA1_c11950 deoB; phosphopentomutase DeoB K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c04300 phnN; putative ATP-binding protein PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D PGA1_c25050 prs; ribose-phosphate pyrophosphokinase Prs K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PGA1_c28000 edd; phosphogluconate dehydratase Edd K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D PGA1_c28010 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PGA1_c31360 putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c07220 putative 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PGA1_c08640 glpX; fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:pga00040]
D PGA1_c07730 putative zinc-binding alcohol dehydrogenase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D PGA1_65p00450 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PGA1_c34480 celA; UTP--glucose-1-phosphate uridylyltransferase CelA K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PGA1_c04170 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PGA1_c14010 xylB; xylulose kinase XylB K00854 xylB; xylulokinase [EC:2.7.1.17]
D PGA1_c14000 xylA; xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PGA1_c19450 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D PGA1_262p01460 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D PGA1_262p01790 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D PGA1_c05130 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D PGA1_c16250 putative L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pga00051]
D PGA1_c28020 frk; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PGA1_65p00290 algA: alginate biosynthesis protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PGA1_c19710 alginate biosynthesis protein algA-like protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_65p00310 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PGA1_c02320 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PGA1_65p00300 fcl; GDP-L-fucose synthetase Fcl K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PGA1_c16250 putative L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PGA1_c08640 glpX; fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PGA1_c14000 xylA; xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PGA1_c13160 mtlK; mannitol 2-dehydrogenase MtlK K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c07220 putative 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PGA1_c20650 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PGA1_c10730 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PGA1_c01190 putative PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:pga00052]
D PGA1_262p00390 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PGA1_65p00190 putative NAD dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PGA1_c34470 exoB; UDP-glucose 4-epimerase ExoB K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PGA1_c34480 celA; UTP--glucose-1-phosphate uridylyltransferase CelA K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c05420 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D PGA1_c07330 bgaB; beta-galactosidase 1 K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PGA1_65p00390 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PGA1_c07390 rafA; alpha-galactosidase RafA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PGA1_c13170 polS; sorbitol dehydrogenase PolS K21620 gdh; galactitol 2-dehydrogenase [EC:1.1.1.16]
D PGA1_c07370 putative short chain dehydrogenase K22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120]
D PGA1_262p01880 mandelate racemase/muconate lactonizing enzyme-like protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D PGA1_c04540 putative d-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D PGA1_c05250 hypothetical protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D PGA1_c07360 dgoK; 2-dehydro-3-deoxygalactonokinase DgoK K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D PGA1_c07350 dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase DgoA K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D PGA1_c07890 aglA; putative alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pga00053]
D PGA1_65p00450 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PGA1_65p00440 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pga00500]
D PGA1_c07890 aglA; putative alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PGA1_c34480 celA; UTP--glucose-1-phosphate uridylyltransferase CelA K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PGA1_c07840 bglA; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c05420 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D PGA1_c27980 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PGA1_c28020 frk; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:pga00620]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c16590 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c19410 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c17550 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PGA1_c17560 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PGA1_c17570 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PGA1_c28840 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D PGA1_c28850 phosphate actetyl/butyryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PGA1_c06970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PGA1_c30540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PGA1_c12610 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PGA1_c12600 accC; biotin carboxylase AccA K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PGA1_c31690 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c04920 lldD1; l-lactate dehydrogenase IldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PGA1_c09430 lldD2; l-lactate dehydrogenase IldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PGA1_c28240 putative D-lactate dehydrogenase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D PGA1_c03300 glyoxalase/bleomycin resistance protein domain-containing protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PGA1_c21210 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PGA1_c33060 glyoxalase-like protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PGA1_c25140 gloB; hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PGA1_c26570 putative glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PGA1_c11910 dme; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PGA1_c34990 tme; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PGA1_c09420 pyc; pyruvate carboxylase Pyc K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PGA1_c13520 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PGA1_c01140 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PGA1_c06510 ppdK; pyruvate, phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PGA1_c09900 glcB; malate synthase GlcB K01638 aceB; malate synthase [EC:2.3.3.9]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c16460 2-isopropylmalate synthase/homocitrate synthase-like protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PGA1_c26470 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pga00630]
D PGA1_c09900 glcB; malate synthase GlcB K01638 aceB; malate synthase [EC:2.3.3.9]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PGA1_c16970 gltA1; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D PGA1_c28860 gltA2; citrate synthase GltA K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PGA1_c18830 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PGA1_c30490 putative citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D PGA1_c03680 putative citrate lyase subunit beta K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c03390 phaB; acetoacetyl-CoA reductase PhaB K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D PGA1_c24980 maoC like domain-containing protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D PGA1_c03870 crotonyl-CoA reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D PGA1_c24490 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PGA1_c03840 mutB; methylmalonyl-CoA mutase large subunit K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D PGA1_c01110 acyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D PGA1_c03710 hypothetical protein K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D PGA1_c21540 pccA; propionyl-CoA carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D PGA1_c21600 pccB; propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PGA1_c21510 bhbA; methylmalonyl-CoA mutase BhbA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PGA1_c29720 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D PGA1_c29710 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D PGA1_c29700 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D PGA1_c28260 gyaR2; glyoxylate reductase GyaR K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PGA1_c26570 putative glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PGA1_c01960 putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PGA1_c08560 hydrolase, HAD-superfamily K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PGA1_c10250 phosphoglycolate phosphatase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PGA1_c23940 putative serine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PGA1_c05550 glutamine synthase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11520 puuA1; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11540 puuA2; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c18720 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c23340 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c27180 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11870 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c24580 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_78p00310 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PGA1_78p00290 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_78p00300 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c05560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c31360 putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PGA1_c17990 dmlA; D-malate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D PGA1_c28010 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PGA1_c25740 fdhF; formate dehydrogenase H K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PGA1_c27650 putative formate dehydrogenase H K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PGA1_c25750 nuoEF; NADH-quinone oxidoreductase subunits E/F (fused) K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D PGA1_c27640 fdhB; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PGA1_c27630 putative formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PGA1_c36330 hutG; N-formylglutamate deformylase HutG K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:pga00640]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c11900 prpE; propionate-CoA ligase PrpE K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PGA1_c28840 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D PGA1_c28850 phosphate actetyl/butyryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PGA1_c33640 putative 2-oxoisovalerate dehydrogenase (fused subunits alpha and beta) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c13870 putative quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c30540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PGA1_c12610 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PGA1_c12600 accC; biotin carboxylase AccA K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PGA1_c31690 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PGA1_c21540 pccA; propionyl-CoA carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D PGA1_c21600 pccB; propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PGA1_c24490 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PGA1_c21510 bhbA; methylmalonyl-CoA mutase BhbA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PGA1_c03630 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PGA1_c03610 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PGA1_c17300 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PGA1_c28860 gltA2; citrate synthase GltA K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PGA1_c18830 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:pga00650]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c01220 putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PGA1_c04110 putative fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PGA1_c22740 fadB2; fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_262p01980 putative enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PGA1_c33450 putative enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PGA1_c36500 enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PGA1_c24980 maoC like domain-containing protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D PGA1_c20930 phaC; poly(3-hydroxyalkanoate) polymerase PhaC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D PGA1_c20940 phaZ; PHA depolymerase PhaZ K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D PGA1_c03390 phaB; acetoacetyl-CoA reductase PhaB K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D PGA1_c17990 dmlA; D-malate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D PGA1_c21150 Asp/Glu/hydantoin racemase-like protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PGA1_c03760 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PGA1_c03780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PGA1_c03740 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PGA1_c03750 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PGA1_c09350 aminotransferase class-III K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D PGA1_262p00540 gabD; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c23170 gabD2; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c29650 gabD4; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c10340 mvaB; hydroxymethylglutaryl-CoA lyase MvaB K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PGA1_c06210 scoA; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PGA1_c06200 scoB; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PGA1_c15020 bdhA; D-beta-hydroxybutyrate dehydrogenase BdhA K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D PGA1_262p02320 putative acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c12350 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c19360 ilvI1; acetolactate synthase isozyme, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20210 ilvI2; acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20220 ilvH; acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PGA1_c23090 putative acetoin(diacetyl) reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00660 C5-Branched dibasic acid metabolism [PATH:pga00660]
D PGA1_262p02320 putative acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c12350 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c19360 ilvI1; acetolactate synthase isozyme, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20210 ilvI2; acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20220 ilvH; acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PGA1_c03630 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PGA1_c03610 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PGA1_c30490 putative citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D PGA1_c03710 hypothetical protein K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D PGA1_c29780 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PGA1_c29790 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PGA1_c29830 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pga00562]
D PGA1_c11720 suhB1; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PGA1_c33490 suhB2; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PGA1_c07210 idhA; inositol 2-dehydrogenase IdhA K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PGA1_c07270 putative iolE/mocC family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D PGA1_c07250 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D PGA1_c07230 putative myo-inositol catabolism protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D PGA1_c07240 putative 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D PGA1_c17300 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PGA1_c20650 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PGA1_c13070 putative oxidoreductase
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pga00190]
D PGA1_c10370 nuoA; NADH-quinone oxidoreductase NuoA K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PGA1_c10380 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PGA1_c10390 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PGA1_c10400 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PGA1_c10410 nqo2; NADH-quinone oxidoreductase chain 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PGA1_c10430 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PGA1_c10460 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PGA1_c10480 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PGA1_c10490 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PGA1_c10510 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PGA1_c10520 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PGA1_c10530 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PGA1_c10540 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PGA1_c10550 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PGA1_c03760 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PGA1_c03780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PGA1_c03740 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PGA1_c03750 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PGA1_c34000 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PGA1_c33990 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PGA1_c33980 petC; cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PGA1_c06260 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D PGA1_c06290 ctaE; cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PGA1_c06710 ctaD; cytochrome c oxidase subunit 1-beta K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PGA1_c06250 ctaC; cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PGA1_c06280 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PGA1_c15110 ctaA; heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PGA1_c30120 ccoN; cytochrome c oxidase subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PGA1_c30110 ccoO; cytochrome c oxidase subunit 2 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PGA1_c30100 cccQ; cytochrome c oxidase subunit 4 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PGA1_c30090 ccoP; cytochrome c oxidase subunit 3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PGA1_c19670 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PGA1_c19660 cydB; cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PGA1_c27620 cytochrome c-like protein K08738 CYC; cytochrome c
D PGA1_c30190 cycM; cytochrome c-552 K08738 CYC; cytochrome c
D PGA1_c32000 cytochrome c K08738 CYC; cytochrome c
D PGA1_c25110 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PGA1_c25090 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PGA1_c25100 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PGA1_c25120 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PGA1_c25080 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PGA1_c00710 atpB; ATP synthase a chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PGA1_c00730 atpX; ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PGA1_c00740 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PGA1_c00720 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PGA1_c24950 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PGA1_c14540 putative polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PGA1_c30390 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pga00710]
D PGA1_c17530 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PGA1_c05510 gapA; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c17250 gapB; glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c27490 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c07220 putative 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PGA1_c08640 glpX; fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PGA1_c17230 tktA; transketolase TktA K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PGA1_c23740 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PGA1_c10730 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PGA1_c20650 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PGA1_c04170 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PGA1_c05780 tal; transaldolase Tal K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PGA1_c01140 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PGA1_c06510 ppdK; pyruvate, phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PGA1_c11910 dme; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PGA1_c34990 tme; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pga00720]
D PGA1_c06510 ppdK; pyruvate, phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PGA1_c09420 pyc; pyruvate carboxylase Pyc K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PGA1_c13520 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PGA1_c03760 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PGA1_c03780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PGA1_c03740 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PGA1_c03750 sdhD; succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PGA1_c03610 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PGA1_c03630 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c28340 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PGA1_c18830 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PGA1_c30540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PGA1_c12610 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PGA1_c12600 accC; biotin carboxylase AccA K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PGA1_c31690 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PGA1_c30490 putative citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D PGA1_c03710 hypothetical protein K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D PGA1_c24490 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PGA1_c21510 bhbA; methylmalonyl-CoA mutase BhbA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PGA1_c05990 fhs; formate--tetrahydrofolate ligase Fhs K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PGA1_c06010 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PGA1_c11700 metF; 5,10-methylenetetrahydrofolate reductase MetF K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PGA1_c16050 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PGA1_c28850 phosphate actetyl/butyryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PGA1_c28840 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pga00680]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PGA1_c31600 fghA; S-formylglutathione hydrolase FghA K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PGA1_c25740 fdhF; formate dehydrogenase H K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PGA1_c27650 putative formate dehydrogenase H K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PGA1_c25750 nuoEF; NADH-quinone oxidoreductase subunits E/F (fused) K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D PGA1_c27640 fdhB; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PGA1_c27630 putative formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PGA1_c11870 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c24580 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c23940 putative serine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PGA1_c31360 putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PGA1_c11420 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PGA1_c30490 putative citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c07220 putative 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PGA1_c08640 glpX; fructose-1,6-bisphosphatase class 2 K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D PGA1_262p01520 soxB3; sarcosine oxidase 3 subunit beta K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D PGA1_c08750 soxB1; sarcosine oxidase subunit beta K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D PGA1_262p01510 soxD; sarcosine oxidase, delta subunit K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D PGA1_c08755 soxD1; sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D PGA1_262p01500 soxA; sarcosine oxidase subunit alpha K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D PGA1_c08760 soxA1; sarcosine oxidase subunit alpha K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D PGA1_262p01490 soxG; putative sarcosine oxidase, gamma subunit K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D PGA1_c08770 putative sarcosine oxidase, subunit gamma K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D PGA1_c28840 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D PGA1_c28850 phosphate actetyl/butyryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c02770 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PGA1_c36140 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PGA1_c36150 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PGA1_c36160 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PGA1_c08570 putative trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D PGA1_c14630 mttB1; trimethylamine methyltransferase MttB K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D PGA1_c16500 mttB2; trimethylamine methyltransferase MttB K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D PGA1_c25550 mttB3; trimethylamine methyltransferase MttB K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D PGA1_c07710 putative sulfopyruvate decarboxylase subunit alpha K06034 comD; sulfopyruvate decarboxylase subunit alpha [EC:4.1.1.79]
D PGA1_c07700 putative sulfopyruvate decarboxylase subunit beta K13039 comE; sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79]
C 00910 Nitrogen metabolism [PATH:pga00910]
D PGA1_262p01260 nirK; copper-containing nitrite reductase NirK K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D PGA1_262p01220 norB; nitric oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D PGA1_262p01230 norC; nitric oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C
D PGA1_c04630 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PGA1_c15620 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PGA1_c08740 gluD; glutamate dehydrogenase GluD K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PGA1_c05550 glutamine synthase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11520 puuA1; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11540 puuA2; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c18720 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c23340 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c27180 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c36100 gltB; glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PGA1_c36090 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PGA1_c31510 cynT; carbonic anhydrase CynT K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pga00920]
D PGA1_c13800 putative alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PGA1_c24800 putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PGA1_c34500 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PGA1_c20770 cysH; phosphoadenosine phosphosulfate reductase CysH K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PGA1_c28870 putative molybdopterin-containing oxidoreductase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D PGA1_c28890 polysulfide reductase chain B-like protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D PGA1_c28900 putative DMSO reductase anchor subunit K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D PGA1_c12450 soxA2; diheme cytochrome c K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D PGA1_c12420 soxX; cytochrome c SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D PGA1_c12430 soxY; sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D PGA1_c12440 soxZ; sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D PGA1_c12460 soxB2; Mn-dependent hydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D PGA1_c12470 soxC; sulfite oxidase molybdopterin subunit K17225 soxC; sulfane dehydrogenase subunit SoxC
D PGA1_c12480 soxD2; sulfite oxidase cytochrome subunit K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D PGA1_c20760 putative nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PGA1_c29430 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PGA1_c17600 serine acetyltransferase-like protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PGA1_c17690 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PGA1_c13950 cysK; cysteine synthase CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PGA1_c14560 metA; homoserine O-succinyltransferase MetA K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PGA1_c15810 pyridoxal phosphate-dependent enzyme, cysteine / methionine metabolism K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PGA1_c23540 metZ; O-succinylhomoserine sulfhydrylase MetZ K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PGA1_c07160 hypothetical protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D PGA1_c18750 dddP; protein DddP (metallopeptidase, family M24), DMSP degrading K28067 dddP; dimethylpropiothetin dethiomethylase [EC:4.4.1.3]
D PGA1_262p01830 putative aminomethyltransferase K17486 dmdA; dimethylsulfoniopropionate demethylase [EC:2.1.1.269]
D PGA1_c11990 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PGA1_c35550 alkK2; medium-chain-fatty-acid--CoA ligase AlkK K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D PGA1_262p01550 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PGA1_262p01860 putative acyl-Co-A dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PGA1_c03150 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PGA1_c12080 putative acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D PGA1_262p01540 putative enoyl-CoA hydratase / isomerase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
D PGA1_262p01850 putative enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pga00061]
D PGA1_c30540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PGA1_c12610 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PGA1_c12600 accC; biotin carboxylase AccA K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PGA1_c31690 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PGA1_c13750 phosphopantetheine binding protein K02078 acpP; acyl carrier protein
D PGA1_c15990 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PGA1_c17920 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
D PGA1_c17940 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c33630 malonyl CoA-acyl carrier protein transacylase-like protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c11240 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c13630 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c13690 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c13730 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c04650 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PGA1_c17890 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PGA1_c10650 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c17930 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c31980 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c04660 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PGA1_c14300 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PGA1_c04640 fabI1; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c16810 fabI2; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c02630 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c04160 putative crotonobetaine/carnitine-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c25300 fadD2; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c32630 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pga00071]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c04110 putative fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PGA1_c22740 fadB2; fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PGA1_c05590 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c12060 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c13810 putative long-chain specific acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c23450 acdA2; acyl-CoA dehydrogenase AcdA K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c34220 acdA3; acyl-CoA dehydrogenase AcdA K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c15710 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PGA1_c02630 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c04160 putative crotonobetaine/carnitine-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c25300 fadD2; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c32630 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c33550 putative fatty acid desaturase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PGA1_c29270 thcD; rhodocoxin reductase ThcD K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:pga00074]
D PGA1_c01040 acpS; holo-[acyl-carrier-protein] synthase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PGA1_c13750 phosphopantetheine binding protein K02078 acpP; acyl carrier protein
D PGA1_c15990 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PGA1_c17920 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
D PGA1_c17940 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c33630 malonyl CoA-acyl carrier protein transacylase-like protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis [PATH:pga00100]
D PGA1_c26100 hypothetical protein K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:pga00121]
D PGA1_c29980 putative short chain dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pga00561]
D PGA1_c31360 putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32030 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PGA1_c03860 putative glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PGA1_c11250 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PGA1_c03010 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PGA1_c03520 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PGA1_c07390 rafA; alpha-galactosidase RafA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:pga00564]
D PGA1_c35480 gpsA; glycerol-3-phosphate dehydrogenase GpsA K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PGA1_c08240 glpD; aerobic glycerol-3-phosphate dehydrogenase GlpD K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PGA1_c03860 putative glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PGA1_c03010 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PGA1_c03520 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PGA1_c07480 hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PGA1_c20630 glycerophosphoryl diester phosphodiesterase-like protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PGA1_c29610 pmtA; phosphatidylethanolamine N-methyltransferase PmtA K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D PGA1_c14240 cdsA; phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PGA1_c05740 pcs; phosphatidylcholine synthase Pcs K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D PGA1_c29620 putative CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PGA1_c14460 putative phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PGA1_c02890 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PGA1_c14750 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PGA1_c16100 putative cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pga00600]
D PGA1_c07390 rafA; alpha-galactosidase RafA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:pga00592]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pga01040]
D PGA1_c26370 putative acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PGA1_c15680 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pga00230]
D PGA1_c13940 ADP-ribose pyrophosphatase-like protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PGA1_c11950 deoB; phosphopentomutase DeoB K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c25050 prs; ribose-phosphate pyrophosphokinase Prs K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PGA1_c10810 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PGA1_c23610 purD; phosphoribosylamine--glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PGA1_c13270 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PGA1_c17120 purL; phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PGA1_c13410 purS; phosphoribosylformylglycinamidine (FGAM) synthase PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PGA1_c13420 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PGA1_c13260 purM; phosphoribosylformylglycinamidine cyclo-ligase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PGA1_c24870 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PGA1_c24860 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PGA1_c13400 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PGA1_c18780 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PGA1_c32860 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PGA1_c06370 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PGA1_c12170 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PGA1_c10770 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PGA1_c03820 deoD; purine nucleoside phosphorylase deoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PGA1_c24750 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PGA1_c14710 hpt; hypoxanthine-guanine phosphoribosyltransferase Hpt K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PGA1_c15220 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PGA1_c19750 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PGA1_c35040 rdgB; nucleoside-triphosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PGA1_c16830 gpt; xanthine phosphoribosyltransferase Gpt K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PGA1_c28100 xdhA; xanthine dehydrogenase XdhA K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D PGA1_c28110 xdhB; xanthine dehydrogenase XdhB K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D PGA1_c14610 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PGA1_c21840 guaD; guanine deaminase GuaD K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PGA1_c15830 gmk; guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PGA1_c06940 putative adenosylcobalamin(B12)-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PGA1_c16760 nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PGA1_c11120 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PGA1_c35400 metal-dependent phosphohydrolase-like protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PGA1_c01010 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PGA1_c16070 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase-like protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PGA1_c21450 phosphatase-like protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PGA1_c00460 adenylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PGA1_c16620 putative adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PGA1_c32720 putative adenylate and guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PGA1_c33560 putative adenylate and guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PGA1_c33620 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PGA1_c23820 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PGA1_c34250 amn; AMP nucleosidase Amn K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PGA1_c34240 ade; adenine deaminase Ade K01486 ade; adenine deaminase [EC:3.5.4.2]
D PGA1_c18140 cpdB1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PGA1_c30230 cpdB2; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PGA1_c21810 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PGA1_c01870 adk1; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D PGA1_c12940 adk2; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D PGA1_c19950 mazG; protein MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PGA1_c30840 phosphoesterase-like protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PGA1_c30850 phosphoesterase-like protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PGA1_c24800 putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PGA1_c05470 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D PGA1_c05480 OHCU decarboxylase domain-containing protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D PGA1_c05530 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D PGA1_c05490 allA; ureidoglycolate hydrolase AllA K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D PGA1_c16200 molybdopterin dehydrogenase, FAD-binding protein
C 00240 Pyrimidine metabolism [PATH:pga00240]
D PGA1_c24560 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PGA1_c06670 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PGA1_c03060 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PGA1_c03020 pyrC1; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PGA1_c10910 pyrC2; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PGA1_c12150 pyrD; dihydroorotate dehydrogenase PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PGA1_c10900 putative orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PGA1_c32450 pyrF; orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PGA1_c14210 pyrH; uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PGA1_c19750 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PGA1_c19950 mazG; protein MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PGA1_c31120 hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PGA1_c35140 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PGA1_c23900 pyrG; CTP synthase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PGA1_c04820 cmk; cytidylate kinase Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PGA1_c12170 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PGA1_c10770 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PGA1_c11960 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PGA1_c18140 cpdB1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PGA1_c30230 cpdB2; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PGA1_c21810 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PGA1_c15050 hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D PGA1_c11930 cdd; cytidine deaminase Cdd K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PGA1_c26940 codA; cytosine deaminase CodA K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PGA1_c11200 putative deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PGA1_c06940 putative adenosylcobalamin(B12)-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PGA1_c16760 nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PGA1_c35400 metal-dependent phosphohydrolase-like protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PGA1_c08010 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PGA1_c26630 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PGA1_c11940 deoA; thymidine phosphorylase DeoA K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PGA1_c24670 tdk; thymidine kinase Tdk K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PGA1_c21180 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PGA1_c12810 pyridine nucleotide-disulfide oxidoreductase-like protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PGA1_c12820 dihydroorotate dehydrogenase-like protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PGA1_c12850 dht; D-hydantoinase/dihydropyrimidinase Dht K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PGA1_c12840 amaB; N-carbamoyl-L-amino acid hydrolase AmaB K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pga00250]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c27800 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PGA1_c25500 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PGA1_c33730 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PGA1_c23940 putative serine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PGA1_c30420 ald; alanine dehydrogenase Ald K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PGA1_c34920 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PGA1_c03450 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PGA1_c23820 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PGA1_c18780 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PGA1_c03060 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PGA1_c09350 aminotransferase class-III K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D PGA1_262p00540 gabD; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c23170 gabD2; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c29650 gabD4; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c36100 gltB; glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PGA1_c36090 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PGA1_c08740 gluD; glutamate dehydrogenase GluD K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PGA1_c11750 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PGA1_c05550 glutamine synthase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11520 puuA1; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11540 puuA2; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c18720 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c23340 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c27180 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c24560 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PGA1_c06670 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PGA1_c09550 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PGA1_c13420 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PGA1_c10230 glmS; glucosamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PGA1_c27890 putative hexosephosphate binding protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PGA1_c10810 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pga00260]
D PGA1_c23510 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PGA1_c31480 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PGA1_c08650 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PGA1_c06310 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D PGA1_c25010 ltaE; low specificity L-threonine aldolase LtaE K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PGA1_c11870 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c24580 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c23940 putative serine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PGA1_c26570 putative glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PGA1_c31360 putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D PGA1_c02770 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PGA1_c36140 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PGA1_c36150 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PGA1_c36160 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PGA1_c34330 kbl; 2-amino-3-ketobutyrate coenzyme A ligase Kbl K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PGA1_c34320 tdh; L-threonine 3-dehydrogenase Tdh K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PGA1_c20350 hemA; 5-aminolevulinate synthase HemA K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PGA1_78p00310 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PGA1_78p00290 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_78p00300 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c05560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c29630 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D PGA1_c29620 putative CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PGA1_c21660 betA; choline dehydrogenase BetA K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PGA1_c21670 betB2; betaine aldehyde dehydrogenase BetB K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PGA1_262p01400 dmgdH; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c14040 dmgdH1; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c25540 dmgdH2; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c28230 dmgdH3; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c33130 dmgdH4; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c19150 soxA3; sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D PGA1_c19170 soxB3; sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D PGA1_c19140 sarcosine oxidase-like protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D PGA1_c19160 soxD3; sarcosine oxidase 2 subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D PGA1_c23770 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PGA1_c04590 putative threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PGA1_c34900 ilvA; threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PGA1_c36290 putative phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PGA1_c04930 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PGA1_c04870 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PGA1_c07820 putative peptidase M22 K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D PGA1_c07810 aminotransferase class-III K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:pga00270]
D PGA1_c17600 serine acetyltransferase-like protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PGA1_c17690 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PGA1_c13950 cysK; cysteine synthase CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PGA1_c00860 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PGA1_c13370 putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c16040 pterin binding domain-containing protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c27430 2-hydroxypropyl-CoM lyase-like protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PGA1_c04780 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PGA1_c14480 speH; S-adenosylmethionine decarboxylase SpeH K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PGA1_c14470 speE; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D PGA1_c03890 raiI; putative acyl-homoserine-lactone synthase RaiI K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PGA1_c06380 putative methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D PGA1_c24750 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PGA1_c16240 mtnA; methylthioribose-1-phosphate isomerase MtnA K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PGA1_c16600 mdeA; methionine gamma-lyase MdeA K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PGA1_c33170 putative sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PGA1_c09390 naeIM; modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c22570 cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c35420 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PGA1_c23510 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PGA1_c31480 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PGA1_c08650 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PGA1_c14560 metA; homoserine O-succinyltransferase MetA K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PGA1_c07640 O-acetylhomoserine / O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PGA1_c15810 pyridoxal phosphate-dependent enzyme, cysteine / methionine metabolism K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PGA1_c23540 metZ; O-succinylhomoserine sulfhydrylase MetZ K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D PGA1_c04020 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34110 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34960 putative branched-chain-amino-acid aminotransferase, subunit A K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c02980 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PGA1_c26710 gshB; glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29430 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PGA1_c03650 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PGA1_c25520 dcyD; D-cysteine desulfhydrase DcyD K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D PGA1_c33720 dcyD2; D-cysteine desulfhydrase 2 K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D PGA1_c23770 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PGA1_c36140 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PGA1_c36150 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pga00280]
D PGA1_c04020 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34110 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34960 putative branched-chain-amino-acid aminotransferase, subunit A K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c20500 ldh; leucine dehydrogenase Ldh K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PGA1_c33640 putative 2-oxoisovalerate dehydrogenase (fused subunits alpha and beta) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c05590 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c12060 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c13810 putative long-chain specific acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c23450 acdA2; acyl-CoA dehydrogenase AcdA K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c34220 acdA3; acyl-CoA dehydrogenase AcdA K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D PGA1_c10280 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c21540 pccA; propionyl-CoA carboxylase alpha chain K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D PGA1_c21600 pccB; propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PGA1_c24490 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PGA1_c21510 bhbA; methylmalonyl-CoA mutase BhbA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PGA1_c07180 2-hydroxy-3-oxopropionate reductase-like protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PGA1_c17360 mmsB; 3-hydroxyisobutyrate dehydrogenase MmsB K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PGA1_c17300 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c34070 lcfB2; long-chain-fatty-acid-CoA ligase IcfB K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D PGA1_c10320 methylcrotonoyl-CoA carboxylase beta chain K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PGA1_c10360 putative enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PGA1_c10340 mvaB; hydroxymethylglutaryl-CoA lyase MvaB K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PGA1_c06210 scoA; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PGA1_c06200 scoB; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c14880 putative 3-hydroxyisobutyrate dehydrogenase
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pga00290]
D PGA1_c04590 putative threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PGA1_c34900 ilvA; threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PGA1_c36290 putative phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PGA1_c29780 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PGA1_c29790 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PGA1_c29830 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PGA1_262p02320 putative acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c12350 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c19360 ilvI1; acetolactate synthase isozyme, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20210 ilvI2; acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20220 ilvH; acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PGA1_c06580 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PGA1_c29490 livD; dihydroxy-acid dehydratase LivD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PGA1_c04020 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34110 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34960 putative branched-chain-amino-acid aminotransferase, subunit A K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c20500 ldh; leucine dehydrogenase Ldh K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PGA1_c16460 2-isopropylmalate synthase/homocitrate synthase-like protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PGA1_c26470 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pga00300]
D PGA1_c08650 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PGA1_c23510 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PGA1_c31480 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PGA1_c28930 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PGA1_c32920 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PGA1_c36310 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PGA1_c24230 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PGA1_c36420 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PGA1_c33950 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PGA1_c03470 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PGA1_c13710 diaminopimelate decarboxylase-like protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PGA1_c32690 putative saccharopine dehydrogenase (NAD+, L-lysine-forming) K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D PGA1_c09520 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PGA1_c09530 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pga00310]
D PGA1_c32690 putative saccharopine dehydrogenase (NAD+, L-lysine-forming) K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D PGA1_c03590 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c15710 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_262p00540 gabD; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c23170 gabD2; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c29650 gabD4; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c27870 CoA-transferase, family III K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D PGA1_c30460 dat; D-alanine aminotransferase Dat K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PGA1_262p02210 FAD dependent oxidoreductase K26065 amaA; L-pipecolate oxidase
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pga00220]
D PGA1_c24220 argF; ornithine carbamoyltransferase ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PGA1_c34920 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PGA1_c03450 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PGA1_c16370 arcA; arginase ArcA K01476 rocF; arginase [EC:3.5.3.1]
D PGA1_c09550 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PGA1_c13420 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PGA1_c05550 glutamine synthase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11520 puuA1; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11540 puuA2; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c18720 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c23340 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c27180 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c24560 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PGA1_c06670 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PGA1_c08740 gluD; glutamate dehydrogenase GluD K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c34600 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PGA1_c02050 argB; acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PGA1_c17050 argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PGA1_c24230 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PGA1_c07830 argE1; acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D PGA1_c10140 argE2; acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pga00330]
D PGA1_c26940 codA; cytosine deaminase CodA K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PGA1_c29630 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D PGA1_c19930 speB2; agmatinase SpeB K01480 speB; agmatinase [EC:3.5.3.11]
D PGA1_c26490 putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PGA1_c03800 putative lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PGA1_c11650 putative lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PGA1_c14470 speE; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D PGA1_c14480 speH; S-adenosylmethionine decarboxylase SpeH K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PGA1_c34400 aminotransferase class-III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p02330 putative aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PGA1_c19920 speB1; agmatinase SpeB K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D PGA1_c11890 putative indoleacetamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c20260 amidase-like protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c25470 putative glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c11510 puuB; gamma-glutamylputrescine oxidoreductase PuuB K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PGA1_c32250 puuC; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D PGA1_c16370 arcA; arginase ArcA K01476 rocF; arginase [EC:3.5.3.1]
D PGA1_c24700 proC; pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PGA1_c11750 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PGA1_c16390 arcB; ornithine cyclodeaminase ArcB K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D PGA1_c15510 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PGA1_c15520 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PGA1_c34670 pip; proline iminopeptidase Pip K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c30460 dat; D-alanine aminotransferase Dat K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PGA1_262p00280 putative proline racemase K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77]
C 00340 Histidine metabolism [PATH:pga00340]
D PGA1_c29870 hisG; ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PGA1_c29880 putative tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PGA1_c09230 hisE; phosphoribosyl-ATP pyrophosphatase HisE K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PGA1_c14400 hisl; phosphoribosyl-AMP cyclohydrolase Hisl K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PGA1_c09270 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PGA1_c17910 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase-like protein K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PGA1_c09320 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PGA1_c09240 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PGA1_c09330 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PGA1_c23930 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c25240 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c31190 hisD4; histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PGA1_c36340 hutH; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PGA1_c36320 hutU; urocanate hydratase HutU K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PGA1_c36350 hutI; imidazolonepropionase HutI K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PGA1_c36360 putative formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D PGA1_c36330 hutG; N-formylglutamate deformylase HutG K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pga00350]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c23930 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c25240 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c07610 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PGA1_c00440 hmgA; homogentisate 1,2-dioxygenase HmgA K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PGA1_c00380 putative maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PGA1_c00430 fah; fumarylacetoacetase Fah K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PGA1_c21340 putative L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c31390 putative aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PGA1_c32220 hpcC; 5-carboxymethyl-2-hydroxymuconic semialdehyde dehydrogenase HpcC K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D PGA1_c32230 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D PGA1_c32190 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D PGA1_c19370 bphF; 4-hydroxy-2-oxovalerate aldolase BphF K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PGA1_c31400 hpcH; 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase HpcH K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PGA1_262p00540 gabD; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c23170 gabD2; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c29650 gabD4; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c33930 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:pga00360]
D PGA1_c21340 putative L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c31390 putative aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c26800 paaK1; phenylacetate-CoA ligase PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D PGA1_c26810 paaI; phenylacetic acid degradation protein PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D PGA1_c04030 phenylacetic acid degradation protein paaA-like protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D PGA1_c04080 paaA; phenylacetic acid degradation protein PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D PGA1_c04070 paaB; phenylacetic acid degradation protein PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D PGA1_c04060 paaC; phenylacetic acid degradation protein PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D PGA1_c04050 paaD; phenylacetic acid degradation protein PaaD K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D PGA1_c04040 paaE; phenylacetic acid degradation NADH oxidoreductase PaaE K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D PGA1_c16990 fadB1; putative enoyl-CoA hydratase FadB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PGA1_c26820 paaG; putative enoyl-CoA hydratase PaaG K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PGA1_262p00800 paaZ; phenylacetic acid degradation protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D PGA1_c26830 paaZ; phenylacetic acid degradation protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D PGA1_c01220 putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c23930 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c25240 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c07610 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PGA1_c30460 dat; D-alanine aminotransferase Dat K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PGA1_78p00050 katG; peroxidase/catalase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D PGA1_c11890 putative indoleacetamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c20260 amidase-like protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c25470 putative glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c29270 thcD; rhodocoxin reductase ThcD K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PGA1_c00410 mhpA; 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase MhpA K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D PGA1_c33780 putative alpha / beta fold hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:pga00380]
D PGA1_c09970 kynA; tryptophan 2,3-dioxygenase KynA K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D PGA1_c09980 kynU; kynureninase KynU K01556 KYNU; kynureninase [EC:3.7.1.3]
D PGA1_c03590 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c15710 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c21340 putative L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c31390 putative aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c23880 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PGA1_c23870 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PGA1_c11890 putative indoleacetamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c20260 amidase-like protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c25470 putative glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_78p00050 katG; peroxidase/catalase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pga00400]
D PGA1_c15860 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase AroH K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PGA1_c14100 aroB; 3-dehydroquinate synthase AroB K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PGA1_c15600 aroQ; 3-dehydroquinate dehydratase AroQ K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PGA1_c35150 aroE; shikimate dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PGA1_c14090 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PGA1_c04810 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PGA1_c34060 aroC; chorismate synthase AroC K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PGA1_c16860 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PGA1_c16880 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PGA1_c16890 trpD; anthranilate phosphoribosyltransferase TrpD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PGA1_c04860 trpF; N-(5'-phosphoribosyl)anthranilate isomerase TrpF K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PGA1_c16910 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PGA1_c04930 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PGA1_c04870 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PGA1_c00590 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D PGA1_c06690 prephenate dehydrogenase-like protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PGA1_c25230 tyrC; protein TyrC K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PGA1_c30200 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c23930 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c25240 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pga00410]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32040 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PGA1_c12810 pyridine nucleotide-disulfide oxidoreductase-like protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PGA1_c12820 dihydroorotate dehydrogenase-like protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PGA1_c12850 dht; D-hydantoinase/dihydropyrimidinase Dht K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PGA1_c12840 amaB; N-carbamoyl-L-amino acid hydrolase AmaB K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c17300 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:pga00430]
D PGA1_c28250 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c33210 putative gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c28770 tpa; taurine--pyruvate aminotransferase Tpa K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D PGA1_c30420 ald; alanine dehydrogenase Ald K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PGA1_c28820 xsc; sulfoacetaldehyde acetyltransferase Xsc K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D PGA1_c28850 phosphate actetyl/butyryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PGA1_c28840 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pga00440]
D PGA1_c04260 phnI; protein PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D PGA1_c04240 phnG; protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D PGA1_c04250 phnH; protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D PGA1_c04290 phnL; phosphonates transport ATP-binding protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D PGA1_c04320 phnM; protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PGA1_c24880 hypothetical protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PGA1_c04270 phnJ; protein PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D PGA1_c07980 metallo beta-lactamase domain-containing protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pga00450]
D PGA1_c00860 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PGA1_c13370 putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c16040 pterin binding domain-containing protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c27430 2-hydroxypropyl-CoM lyase-like protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PGA1_c16600 mdeA; methionine gamma-lyase MdeA K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PGA1_c15430 sufS; cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PGA1_c24780 trxB; thioredoxin reductase TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PGA1_c24800 putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PGA1_c12210 putative selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PGA1_c08340 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pga00460]
D PGA1_c07840 bglA; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PGA1_c28250 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c33210 putative gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c11870 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c24580 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pga00470]
D PGA1_c10880 alr; alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D PGA1_c30460 dat; D-alanine aminotransferase Dat K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PGA1_c09660 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PGA1_c13760 dltA1; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13780 dltA2; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c09550 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PGA1_c13420 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PGA1_c17060 putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PGA1_c09560 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PGA1_c30480 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D PGA1_c30470 mandelate racemase / muconate lactonizing enzyme K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D PGA1_c25500 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PGA1_c33730 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PGA1_c33950 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PGA1_c03470 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PGA1_c13710 diaminopimelate decarboxylase-like protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PGA1_c28200 FAD dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D PGA1_c17610 putative alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D PGA1_c05120 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D PGA1_c05110 dihydrodipicolinate synthase domain-containing protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
C 00480 Glutathione metabolism [PATH:pga00480]
D PGA1_c28250 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c33210 putative gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_262p00910 putative cation transort protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D PGA1_c25200 chaC; putative cation transport protein ChaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D PGA1_c28700 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PGA1_c28710 allophanate hydrolase, subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D PGA1_c02980 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PGA1_c26710 gshB; glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PGA1_c19800 pepA; cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PGA1_c31530 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PGA1_c09880 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PGA1_c07460 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c12050 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c13330 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c23760 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c26690 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c32680 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c33430 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c36120 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c02360 pyridine nucleotide-disulfide oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PGA1_c23720 gor; glutathione reductase Gor K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PGA1_c28340 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PGA1_c15160 zwf1; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PGA1_c27990 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PGA1_c29280 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D PGA1_c03800 putative lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PGA1_c11650 putative lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PGA1_c14470 speE; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pga00520]
D PGA1_c11350 anmK; anhydro-N-acetylmuramic acid kinase AnmK K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PGA1_c35340 putative phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D PGA1_c35330 nucleotidyl transferase-like protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PGA1_c27920 murQ; N-acetylmuramic acid 6-phosphate etherase MurQ K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PGA1_c10240 glmU; bifunctional enzyme GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PGA1_c31220 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PGA1_c09650 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PGA1_c11160 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PGA1_c27880 nagA; N-acetylglucosamine-6-phosphate deacetylase NagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PGA1_c27910 putative ATPase, BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D PGA1_c06550 glmM; phosphoglucosamine mutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PGA1_c10230 glmS; glucosamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PGA1_c27890 putative hexosephosphate binding protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PGA1_c28020 frk; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PGA1_c27980 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PGA1_65p00290 algA: alginate biosynthesis protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PGA1_c19710 alginate biosynthesis protein algA-like protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PGA1_c28540 dTDP-D-glucose 4,6-dehydratase-like protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D PGA1_65p00440 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PGA1_c05420 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c34480 celA; UTP--glucose-1-phosphate uridylyltransferase CelA K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PGA1_65p00450 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PGA1_65p00190 putative NAD dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PGA1_c34470 exoB; UDP-glucose 4-epimerase ExoB K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PGA1_65p00390 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PGA1_c01190 putative PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PGA1_65p00220 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:pga00541]
D PGA1_c10240 glmU; bifunctional enzyme GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PGA1_262p02300 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D PGA1_c36010 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PGA1_c24330 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase KdsA K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PGA1_c34490 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PGA1_c34480 celA; UTP--glucose-1-phosphate uridylyltransferase CelA K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PGA1_65p00450 ugd; UDP-glucose 6-dehydrogenase Ugd K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PGA1_c02310 putative pyridoxal-phosphate-dependent aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D PGA1_65p00220 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PGA1_65p00240 rffG; dTDP-glucose 4,6-dehydratase RffG K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PGA1_65p00250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PGA1_65p00230 rfbD; dTDP-4-dehydrorhamnose reductase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PGA1_65p00290 algA: alginate biosynthesis protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PGA1_c19710 alginate biosynthesis protein algA-like protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D PGA1_65p00310 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PGA1_c02320 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PGA1_65p00300 fcl; GDP-L-fucose synthetase Fcl K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pga00540]
D PGA1_c14310 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PGA1_c09700 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PGA1_c16000 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PGA1_c14320 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PGA1_c14330 lpxB; lipid-A-disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PGA1_c33510 lpxK; tetraacyldisaccharide 4'-kinase LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PGA1_c10190 waaA; 3-deoxy-D-manno-octulosonic-acid transferase WaaA K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PGA1_c33500 3-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PGA1_c18810 putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PGA1_c04940 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:pga00550]
D PGA1_c31220 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PGA1_c09650 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PGA1_c09620 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PGA1_c09560 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PGA1_c09520 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PGA1_c09660 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PGA1_c09530 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PGA1_c14230 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PGA1_c36070 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PGA1_c09540 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PGA1_c09610 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PGA1_c36110 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c20280 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PGA1_c31860 pbpC; penicillin-binding protein PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PGA1_c09600 ftsw; cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c26540 mrdB; rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c26530 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PGA1_c09510 putative peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PGA1_c08020 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PGA1_c26270 putative D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pga00552]
D PGA1_c36070 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PGA1_c13760 dltA1; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13780 dltA2; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pga00543]
D PGA1_c17600 serine acetyltransferase-like protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PGA1_c17690 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PGA1_262p00380 sugar transferase K16566 exoY; exopolysaccharide production protein ExoY
D PGA1_262p00100 putative glycosyl transferase K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D PGA1_262p00120 exoL; succinoglycan biosynthesis protein ExoL K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-]
D PGA1_262p00110 putative glycosyl transferase K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-]
D PGA1_262p00050 putative glycosyl transferase K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]
D PGA1_262p00060 putative glycosyl transferase K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pga00730]
D PGA1_c09110 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PGA1_c09030 thiD; phosphomethylpyrimidine kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PGA1_c15360 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PGA1_c09100 thiO; putative thiamine biosynthesis oxidoreductase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PGA1_c28970 putative FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PGA1_c34170 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PGA1_c09070 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PGA1_c09050 thiE; thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PGA1_c15090 putative thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PGA1_c10970 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PGA1_c23790 thiamine pyrophosphokinase-like protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PGA1_c01870 adk1; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D PGA1_c12940 adk2; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D PGA1_c35920 thiamine kinase ThiK-like protein
C 00740 Riboflavin metabolism [PATH:pga00740]
D PGA1_c33340 putative GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PGA1_c08920 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PGA1_c08870 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PGA1_c08930 ribH1; 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PGA1_c34020 ribH2; 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PGA1_c08910 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PGA1_c24990 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PGA1_c21090 putative nitrilotriacetate monooxygenase component B K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36]
D PGA1_c00550 putative cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D PGA1_c13940 ADP-ribose pyrophosphatase-like protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:pga00750]
D PGA1_c16800 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase PdxH K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PGA1_c36150 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PGA1_c19850 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PGA1_c01030 pdxJ; pyridoxine 5'-phosphate synthase PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PGA1_c06310 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pga00760]
D PGA1_c27800 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PGA1_c27790 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PGA1_c27810 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PGA1_c32130 pncB; nicotinate phosphoribosyltransferase PncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PGA1_c03820 deoD; purine nucleoside phosphorylase deoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PGA1_c12170 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PGA1_c10770 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PGA1_c26290 putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PGA1_c19950 mazG; protein MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PGA1_c30220 putative NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PGA1_c26450 nadE; glutamine-dependent NAD(+) synthetase NadE K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PGA1_c14740 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PGA1_c32150 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PGA1_c11880 putative ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PGA1_c31610 putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PGA1_c10030 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PGA1_c10040 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PGA1_c21150 Asp/Glu/hydantoin racemase-like protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PGA1_262p00540 gabD; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c23170 gabD2; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PGA1_c29650 gabD4; succinate-semialdehyde dehdyrogenase GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pga00770]
D PGA1_262p02320 putative acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c12350 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c19360 ilvI1; acetolactate synthase isozyme, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20210 ilvI2; acetolactate synthase isozyme 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PGA1_c20220 ilvH; acetolactate synthase isozyme 3 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PGA1_c06580 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PGA1_c29490 livD; dihydroxy-acid dehydratase LivD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PGA1_c32050 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PGA1_c32040 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PGA1_c10570 coaX; type III pantothenate kinase CoaX K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PGA1_c26640 coaBC; coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PGA1_c19950 mazG; protein MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PGA1_c17270 coaA; phosphopantetheine adenylyltransferase CoaA K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PGA1_c35160 coaE; dephospho-CoA kinase CoaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PGA1_c01040 acpS; holo-[acyl-carrier-protein] synthase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PGA1_c13820 4'-phosphopantetheinyl transferase-like protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PGA1_c04020 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34110 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34960 putative branched-chain-amino-acid aminotransferase, subunit A K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c12810 pyridine nucleotide-disulfide oxidoreductase-like protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D PGA1_c12820 dihydroorotate dehydrogenase-like protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PGA1_c12850 dht; D-hydantoinase/dihydropyrimidinase Dht K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PGA1_c12840 amaB; N-carbamoyl-L-amino acid hydrolase AmaB K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pga00780]
D PGA1_c09170 bioC; putative biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PGA1_c04650 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PGA1_c17890 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PGA1_c10650 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c17930 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c31980 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c14300 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PGA1_c04640 fabI1; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c16810 fabI2; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c09160 hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PGA1_c09130 bioF; 8-amino-7-oxononanoate synthase BioF K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PGA1_c09150 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PGA1_c09140 bioD; dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PGA1_c09120 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D PGA1_c10560 birA; biotin-[acetyl-CoA-carboxylase] synthetase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pga00785]
D PGA1_c06740 lipB; octanoyltransferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PGA1_78p00270 lipA; lipoyl synthase LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PGA1_c14680 lipA; lipoyl synthase LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c16590 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c19410 transketolase-like protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PGA1_c17550 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PGA1_c17560 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PGA1_c17570 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PGA1_c03600 sucA; 2-oxoglutarate dehydrogenase E1 component SucA K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PGA1_c03590 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PGA1_c33640 putative 2-oxoisovalerate dehydrogenase (fused subunits alpha and beta) K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PGA1_78p00310 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PGA1_78p00290 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PGA1_78p00300 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c05560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pga00790]
D PGA1_c23530 hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PGA1_c06530 dihydroneopterin aldolase-like protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PGA1_c00990 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PGA1_c06540 folP; dihydropteroate synthase FolP K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PGA1_c21170 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PGA1_c31680 folC; putative bifunctional enzyme FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PGA1_c33340 putative GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PGA1_c08920 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PGA1_c24550 putative para-aminobenzoate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PGA1_c24540 putative aminotransferase, class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PGA1_c05610 queD; putative queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PGA1_c29290 putative pterin 4 alpha carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PGA1_c05620 queE; putative 7-cyano-7-deazaguanosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PGA1_c05600 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PGA1_c05630 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PGA1_c10200 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PGA1_c16920 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PGA1_c02910 moaE; molybdopterin-converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PGA1_c03080 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PGA1_c03270 moeA1; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PGA1_c16930 moeA2; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PGA1_c03240 mobA; putative molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D PGA1_c14030 hypothetical protein
D PGA1_c20890 hypothetical protein
C 00670 One carbon pool by folate [PATH:pga00670]
D PGA1_c21170 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PGA1_c05990 fhs; formate--tetrahydrofolate ligase Fhs K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PGA1_c06010 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PGA1_c11870 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c24580 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c13270 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PGA1_c32860 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PGA1_78p00290 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PGA1_c13370 putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c16040 pterin binding domain-containing protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c21180 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PGA1_c11700 metF; 5,10-methylenetetrahydrofolate reductase MetF K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PGA1_c16050 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PGA1_c04780 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PGA1_c35420 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PGA1_262p01400 dmgdH; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c14040 dmgdH1; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c25540 dmgdH2; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c28230 dmgdH3; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_c33130 dmgdH4; dimethylglycine dehydrogenase DmgdH K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D PGA1_78p00310 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_78p00300 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c05560 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D PGA1_c21660 betA; choline dehydrogenase BetA K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PGA1_c21670 betB2; betaine aldehyde dehydrogenase BetB K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pga00860]
D PGA1_c20350 hemA; 5-aminolevulinate synthase HemA K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PGA1_c16960 gltX1; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c26430 gltX2; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c14900 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PGA1_c29950 hemC; porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PGA1_c35500 uoporphyrinogen-III synthase HemD-like protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PGA1_c29940 hemE; uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PGA1_c29970 hemF; coproporphyrinogen 3 oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PGA1_c00360 hemN1; oxygen-independent coproporphyrinogen III oxidase HemN K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PGA1_c35130 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D PGA1_c34740 hemH; ferrochelatase HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PGA1_c08070 cobA1; uroporphyrin-III C-methyltransferase CobA K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PGA1_c20740 cobA2; uroporphyrinogen-III C-methyltransferase CobA K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PGA1_c06260 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D PGA1_c15110 ctaA; heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PGA1_c08140 cobI; precorrin-2 C(20)-methyltransferase CobI K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PGA1_c08160 putative precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D PGA1_c08130 cobJ; precorrin-3B C(17)-methyltransferase CobJ K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D PGA1_c08090 cobM; precorrin-4 C(11)-methyltransferase CobM K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PGA1_c08100 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D PGA1_c08050 putative precorrin-6A synthase (deacetylating), cobF K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D PGA1_c08120 cobK; precorrin-6A reductase CobK K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PGA1_c08110 cobL; precorrin-6Y C(5,15)-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PGA1_c08150 cobH; precorrin-8X methylmutase CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PGA1_c08080 cobB; putative cobyrinic acid A,C-diamide synthase CobB K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PGA1_c08170 cobN; aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PGA1_c09780 cobS; aerobic cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D PGA1_c09770 cobT2; aerobic cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D PGA1_c01260 putative cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PGA1_c08200 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase CobO K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PGA1_c24000 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PGA1_c00820 cobD; putative cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PGA1_c00830 cobC; putative threonine-phosphate decarboxylase CobC K02225 cobC1; cobalamin biosynthesis protein CobC
D PGA1_c26670 cobP; bifunctional adenosylcobalamin biosynthesis protein CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PGA1_c07560 putative cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PGA1_c07570 cobT1; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PGA1_c26680 putative phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pga00130]
D PGA1_c33890 thioesterase-like protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PGA1_c02940 ubiA; 4-hydroxybenzoate octaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PGA1_c34680 ubiG; 3-demethylubiquinone-9 3-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PGA1_c06620 putative FAD-dependent hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PGA1_c33260 protein VisC-like protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PGA1_c36480 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PGA1_c07610 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pga00900]
D PGA1_c34170 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PGA1_c14250 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PGA1_c14760 ispDF; bifunctional enzyme IspDF K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D PGA1_c03340 putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PGA1_c20330 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PGA1_c00970 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c32010 idi; isopentenyl-diphosphate delta-isomerase Idi K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PGA1_c34160 ispA; geranyltranstransferase IspA K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PGA1_c03350 ispB; octaprenyl-diphosphate synthase IspB K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PGA1_c14230 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:pga00906]
D PGA1_c16450 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pga00907]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c10340 mvaB; hydroxymethylglutaryl-CoA lyase MvaB K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PGA1_c17230 tktA; transketolase TktA K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pga00523]
D PGA1_65p00220 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PGA1_65p00240 rffG; dTDP-glucose 4,6-dehydratase RffG K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PGA1_65p00250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PGA1_65p00230 rfbD; dTDP-4-dehydrorhamnose reductase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:pga01054]
D PGA1_c25500 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PGA1_c33730 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pga01053]
D PGA1_c06000 chorismate mutase-like protein K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
D PGA1_78p00450 hypothetical protein K15652 asbF; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D PGA1_78p00410 putative siderophore biosynthesis protein K24108 asbA; spermidine-citrate ligase [EC:6.3.2.-]
D PGA1_78p00420 putative siderophore biosynthesis protein K24109 asbB; 3,4-dihydroxybenzoyl-citryl-spermidine/N-citryl-spermidine--spermidine ligase [EC:6.3.2.-]
D PGA1_78p00430 putative AMP-dependent synthetase and ligase K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62]
D PGA1_78p00440 hypothetical protein K24112 asbE; petrobactin synthase [EC:2.-.-.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D PGA1_65p00240 rffG; dTDP-glucose 4,6-dehydratase RffG K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pga00946]
D PGA1_c07840 bglA; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:pga00311]
D PGA1_c14870 quiP; acyl-homoserine lactone acylase QuiP K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PGA1_c09800 bla; beta-lactamase Bla K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:pga00332]
D PGA1_c15510 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PGA1_c15520 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pga00261]
D PGA1_c24800 putative bifunctional SAT/APS kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PGA1_c23510 lysC; aspartokinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PGA1_c31480 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PGA1_c28930 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PGA1_c32920 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pga00521]
D PGA1_c05420 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
D PGA1_c24340 algC; phosphomannomutase/phosphoglucomutase AlgC K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D PGA1_c11720 suhB1; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PGA1_c33490 suhB2; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PGA1_c07210 idhA; inositol 2-dehydrogenase IdhA K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D PGA1_65p00220 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PGA1_65p00240 rffG; dTDP-glucose 4,6-dehydratase RffG K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PGA1_65p00250 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PGA1_65p00230 rfbD; dTDP-4-dehydrorhamnose reductase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PGA1_c13070 putative oxidoreductase
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PGA1_c05420 glk; glucokinase Glk K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pga00525]
D PGA1_65p00220 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PGA1_65p00240 rffG; dTDP-glucose 4,6-dehydratase RffG K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pga00401]
D PGA1_c06690 prephenate dehydrogenase-like protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PGA1_c25230 tyrC; protein TyrC K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c23930 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c25240 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:pga00405]
D PGA1_c32020 hypothetical protein K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D PGA1_c16860 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PGA1_c16880 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PGA1_c17940 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c33630 malonyl CoA-acyl carrier protein transacylase-like protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c10650 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c17930 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c31980 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c04640 fabI1; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c16810 fabI2; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PGA1_c13750 phosphopantetheine binding protein K02078 acpP; acyl carrier protein
D PGA1_c15990 putative acyl carrier protein K02078 acpP; acyl carrier protein
D PGA1_c17920 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pga00999]
D PGA1_c04780 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PGA1_c35150 aroE; shikimate dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PGA1_c07840 bglA; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D PGA1_c17610 putative alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pga00362]
D PGA1_c04570 putative 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c04090 paaJ; beta-ketoadipyl-CoA thiolase PaaJ K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D PGA1_c02540 hypothetical protein K27848 E2.3.1.318; 3-oxoadipate:acetyl-CoA acetyltransferase [EC:2.3.1.318]
D PGA1_c02550 pcaG; protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PGA1_c02560 pcaH; protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D PGA1_c04560 putative fumarate lyase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D PGA1_c02570 pcaC; putative 4-carboxymuconolactone decarboxylase PcaC K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PGA1_c10070 carboxymuconolactone decarboxylase-like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PGA1_c10500 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PGA1_c21140 carboxymuconolactone decarboxylase-like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PGA1_c29270 thcD; rhodocoxin reductase ThcD K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D PGA1_c23660 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PGA1_c02810 pobA; P-hydroxybenzoate hydroxylase PobA K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D PGA1_c33890 thioesterase-like protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D PGA1_c04130 putative acyl-CoA dehydrogenase K04118 pimC; pimeloyl-CoA dehydrogenase large subunit [EC:1.3.1.62]
D PGA1_c04140 putative acyl-CoA dehydrogenase K28556 pimD; pimeloyl-CoA dehydrogenase small subunit [EC:1.3.1.62]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PGA1_c04110 putative fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PGA1_c22740 fadB2; fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PGA1_c15710 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PGA1_c01220 putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pga00627]
D PGA1_c23880 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PGA1_c23870 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PGA1_c11890 putative indoleacetamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c20260 amidase-like protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c25470 putative glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c23440 putative benzoate-CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D PGA1_c23490 NADH:flavin oxidoreductase/NADH oxidase, containing FAD binding domain K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
C 00364 Fluorobenzoate degradation
D PGA1_c23880 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PGA1_c23870 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pga00625]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PGA1_262p00230 betB; betaine aldehyde dehydrogenase BetB K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_262p01380 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_78p00120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32120 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c32800 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c33040 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PGA1_c04610 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D PGA1_c31640 haloacid dehalogenase-like protein
C 00361 Chlorocyclohexane and chlorobenzene degradation
D PGA1_c04610 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pga00643]
D PGA1_c00440 hmgA; homogentisate 1,2-dioxygenase HmgA K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PGA1_c00380 putative maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D PGA1_c00430 fah; fumarylacetoacetase Fah K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PGA1_c23880 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D PGA1_c23870 nthB; nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D PGA1_c11890 putative indoleacetamide hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c20260 amidase-like protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PGA1_c25470 putative glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:pga00930]
D PGA1_c33550 putative fatty acid desaturase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D PGA1_c12020 fadJ; fatty acid oxidation complex FadJ subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pga00626]
D PGA1_c02510 frmA; S-(hydroxymethyl)glutathione dehydrogenase FrmA K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D PGA1_c02550 pcaG; protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D PGA1_c02560 pcaH; protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:pga00984]
D PGA1_c29920 alpha-methylacyl-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pga03020]
D PGA1_c01430 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PGA1_c01440 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PGA1_c01900 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PGA1_c01000 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pga03010]
D PGA1_c00110 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c25700 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c28650 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c32370 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c00140 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c25670 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c28620 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c32340 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c00150 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c25660 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c28610 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c32330 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c04830 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PGA1_c15570 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PGA1_c01620 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PGA1_c25280 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PGA1_c01770 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PGA1_c18090 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PGA1_c01500 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PGA1_c01740 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PGA1_c14520 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PGA1_c01540 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PGA1_c01890 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PGA1_c01490 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PGA1_c01880 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PGA1_c01730 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PGA1_c32980 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PGA1_c00570 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PGA1_c01690 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PGA1_c18100 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PGA1_c01600 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PGA1_c36510 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PGA1_c30380 rpsU2; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PGA1_c01400 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PGA1_c01590 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PGA1_c01550 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PGA1_c01560 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PGA1_c01720 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PGA1_c01750 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PGA1_c18110 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PGA1_c01410 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PGA1_c01380 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PGA1_c01420 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PGA1_c14510 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PGA1_c01700 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PGA1_c01850 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PGA1_c01630 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PGA1_c01910 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PGA1_c01760 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PGA1_c00510 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PGA1_c07000 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PGA1_c15470 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PGA1_c01610 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PGA1_c01570 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PGA1_c01710 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PGA1_c04910 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PGA1_c15480 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PGA1_c24170 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PGA1_c01680 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PGA1_c01780 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PGA1_c00500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PGA1_c11255 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PGA1_c21940 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PGA1_c02150 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PGA1_c06990 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PGA1_c32500 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pga00970]
D PGA1_c00120 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c25690 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c28640 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c30590 trnA4; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c32360 trnA5; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_262p01070 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c02200 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c16030 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c25830 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c33860 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c13040 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PGA1_c16650 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PGA1_c20370 trnD1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PGA1_c20380 trnD2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PGA1_c20390 trnD3; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PGA1_c22650 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PGA1_c02680 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PGA1_c08610 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PGA1_c08620 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PGA1_c09360 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c09370 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c09400 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c15190 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c22590 trnG5; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c08980 trnH; tRNA-His K14226 tRNA-His; tRNA His
D PGA1_c00130 trnI1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c25680 trnI2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c28630 trnI3; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c32350 trnI4; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c06760 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c11780 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c16330 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c18690 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c36030 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c36040 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c33940 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PGA1_c00160 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c13230 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c25650 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c28600 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c30300 trnM5; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c32320 trnM6; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c31085 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PGA1_c11210 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PGA1_c16770 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PGA1_c29850 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PGA1_c05050 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c08040 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c13980 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c15450 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c07660 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PGA1_c31240 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PGA1_c35530 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PGA1_c01340 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PGA1_c20410 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D PGA1_c20480 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D PGA1_c32490 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D PGA1_c16960 gltX1; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c26430 gltX2; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c21970 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PGA1_c33270 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PGA1_c09840 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PGA1_c21980 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PGA1_c15270 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PGA1_c24530 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PGA1_c06470 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PGA1_c06500 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PGA1_c20990 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PGA1_c18960 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PGA1_c16470 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PGA1_c08340 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PGA1_c00900 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PGA1_c11630 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PGA1_c33400 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PGA1_c05710 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PGA1_c26240 putative lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PGA1_c11140 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PGA1_c21420 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PGA1_c29890 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PGA1_c07010 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PGA1_c07030 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PGA1_c11340 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PGA1_c26770 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D PGA1_c01060 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pga03060]
D PGA1_c01860 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D PGA1_c01360 putative preprotein translocase, secE subunit K03073 secE; preprotein translocase subunit SecE
D PGA1_c23890 preprotein translocase secG-like protein K03075 secG; preprotein translocase subunit SecG
D PGA1_c18920 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PGA1_c18910 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D PGA1_c18930 preprotein translocase YajC-like protein K03210 yajC; preprotein translocase subunit YajC
D PGA1_c02090 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PGA1_c34580 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PGA1_c35180 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D PGA1_c00630 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PGA1_c23570 putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D PGA1_c10700 tatA; putative independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PGA1_c10710 tatB; putative sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PGA1_c10720 tatC; putative sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PGA1_c01050 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PGA1_c32850 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pga04122]
D PGA1_c15360 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PGA1_c29430 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PGA1_c13460 putative sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PGA1_c14340 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PGA1_c02910 moaE; molybdopterin-converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PGA1_c10200 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PGA1_c02900 putative molybdopterin-converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D PGA1_c16230 hypothetical protein K03636 moaD; sulfur-carrier protein
D PGA1_c18630 hypothetical protein K03636 moaD; sulfur-carrier protein
D PGA1_c16920 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PGA1_c03080 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PGA1_c09090 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pga03018]
D PGA1_c29090 rppH; RNA pyrophosphohydrolase RppH K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PGA1_c13450 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PGA1_c11420 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PGA1_c33000 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PGA1_c11390 rhlE2; putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PGA1_c36430 putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PGA1_c09790 deaD; cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PGA1_c31900 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PGA1_c35120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PGA1_c10580 rnjA; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PGA1_c34530 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PGA1_c24920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PGA1_c14850 hfq; protein hfq (RNA chaperone hfq) K03666 hfq; host factor-I protein
D PGA1_c14540 putative polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PGA1_c30390 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PGA1_c34840 putative tRNA-nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pga03030]
D PGA1_c35170 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PGA1_c28090 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PGA1_c30260 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PGA1_c08000 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PGA1_c33420 DNA polymerase 3-like protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PGA1_c19790 putative DNA polymerase III chi subunit, holC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PGA1_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c22550 DNA polymerase III beta subunit-like protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c10890 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PGA1_c08790 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D PGA1_c14120 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D PGA1_c00930 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PGA1_c33580 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PGA1_c31780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PGA1_c14370 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pga03410]
D PGA1_c29040 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PGA1_c16900 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PGA1_c33540 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PGA1_c36490 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PGA1_c16430 putative DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PGA1_c22000 putative DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PGA1_262p00560 uracil DNA glycosylase-like protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PGA1_c03070 putative uracil DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PGA1_c11070 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PGA1_c33320 putative exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PGA1_c31780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PGA1_c08630 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PGA1_c14370 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pga03420]
D PGA1_c14920 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PGA1_c17370 uvrA; uvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D PGA1_c26160 uvrB; uvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D PGA1_c02880 uvrC; uvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PGA1_c09450 uvrD; DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PGA1_c31780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PGA1_c14370 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pga03430]
D PGA1_c35000 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PGA1_c32740 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PGA1_c09450 uvrD; DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PGA1_c23600 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PGA1_c34150 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PGA1_c08630 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PGA1_c14120 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D PGA1_c28090 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PGA1_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c22550 DNA polymerase III beta subunit-like protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c30260 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PGA1_c33420 DNA polymerase 3-like protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PGA1_c08000 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PGA1_c35170 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PGA1_c19790 putative DNA polymerase III chi subunit, holC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PGA1_c14370 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pga03440]
D PGA1_c08630 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PGA1_c14120 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D PGA1_c00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PGA1_c01090 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PGA1_c30290 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PGA1_c15260 recA; protein recA (recombinase A) K03553 recA; recombination protein RecA
D PGA1_c31780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PGA1_c05860 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PGA1_c05870 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PGA1_c05850 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PGA1_c14380 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PGA1_c28090 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PGA1_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c22550 DNA polymerase III beta subunit-like protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c30260 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PGA1_c33420 DNA polymerase 3-like protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PGA1_c08000 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PGA1_c35170 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PGA1_c19790 putative DNA polymerase III chi subunit, holC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PGA1_c05790 priA; primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pga02010]
D PGA1_c27750 hypothetical protein K05772 tupA; tungstate transport system substrate-binding protein
D PGA1_c27770 putative ABC transporter inner membrane component K05773 tupB; tungstate transport system permease protein
D PGA1_c27760 ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D PGA1_262p02180 modA; molybdate-binding periplasmic protein ModA K02020 modA; molybdate transport system substrate-binding protein
D PGA1_262p02190 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D PGA1_262p02200 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PGA1_c07910 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D PGA1_c32510 futA; iron uptake protein FutA K02012 afuA; iron(III) transport system substrate-binding protein
D PGA1_c32540 sfuB; putative Fe(3+)-transport system protein SfuB K02011 afuB; iron(III) transport system permease protein
D PGA1_c10670 putative putrescine transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PGA1_c34050 thiB; thiamine-binding periplasmic protein ThiB K02064 thiB; thiamine transport system substrate-binding protein
D PGA1_c34040 thiP; thiamine transport system permease protein ThiP K02063 thiP; thiamine transport system permease protein
D PGA1_c34030 thiQ; thiamine import ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PGA1_c31310 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PGA1_c31280 ABC transporter permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PGA1_c31290 ABC transporter ATP-binding protein K11071 potB; spermidine/putrescine transport system permease protein
D PGA1_c31300 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PGA1_c34420 potF; putrescine-binding periplasmic protein PotF K11073 potF; putrescine transport system substrate-binding protein
D PGA1_c34450 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D PGA1_c34440 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D PGA1_c34430 potG; putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PGA1_c22800 opuAC; glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c23260 glycine betaine transport system, substrate binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c25570 putative glycine betaine transport system, substrate binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c33750 putative glycine betaine transport system substrate binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c00290 proW; glycine betaine/L-proline transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c22790 opuAB; glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c23280 amino acid transport sytem, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c25580 putative glycine betaine/L-proline transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c33770 putative ABC transporter permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c22780 opuAA; glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c23270 amino acid transport sytem, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c25590 putative glycine betaine/L-proline transport system, ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c33760 putative glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c07440 ABC transporter, ATP binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c13180 ABC transporter, ATP binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c16680 sugar ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c27970 smoK; ATP-binding transport protein SmoK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_78p00190 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgbC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c19470 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c27320 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c30800 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c27930 putative sugar ABC transporter, periplasmic binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PGA1_c27940 ABC transporter permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PGA1_c27950 ABC transporter permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PGA1_c13210 extracellular solute-binding protein K10227 smoE; polyol transport system substrate-binding protein
D PGA1_c13200 ABC transporter permease protein K10228 smoF; polyol transport system permease protein
D PGA1_c13190 ABC transporter permease protein K10229 smoG; polyol transport system permease protein
D PGA1_c07860 aglE; alpha-glucosides-binding periplasmic protein AglE K10232 aglE; alpha-glucoside transport system substrate-binding protein
D PGA1_c07870 aglF; alpha-glucoside transport system permease protein AglF K10233 aglF; alpha-glucoside transport system permease protein
D PGA1_c07880 aglG; alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein
D PGA1_c07900 aglK; alpha-glucoside transport ATP-binding protein AglK K10235 aglK; alpha-glucoside transport system ATP-binding protein
D PGA1_c29370 putative toluene tolerance protein, Ttg2 family K07323 mlaC; phospholipid transport system substrate-binding protein
D PGA1_c12570 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PGA1_c10870 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PGA1_c10860 putative ABC transporter, ATP binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PGA1_c03970 putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PGA1_c26900 putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PGA1_c28170 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PGA1_c03950 putative permease protein K23535 nupB; general nucleoside transport system permease protein
D PGA1_c26920 ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D PGA1_c28140 ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D PGA1_c03940 putative permease protein K23536 nupC; general nucleoside transport system permease protein
D PGA1_c26930 ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D PGA1_c28160 ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D PGA1_c03960 rbsA1; ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D PGA1_c26910 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PGA1_c28130 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PGA1_78p00160 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PGA1_c19500 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PGA1_78p00170 ugpA; putative sn-glycerol-3-phosphate transport system permease protein UgpA K17316 gtsB; glucose/mannose transport system permease protein
D PGA1_c19490 ABC transporter, inner-membrane protein K17316 gtsB; glucose/mannose transport system permease protein
D PGA1_78p00180 ugpE; putative sn-glycerol-3-phosphate transport system permease protein UgpE K17317 gtsC; glucose/mannose transport system permease protein
D PGA1_c19480 ABC transporter, inner-membrane protein K17317 gtsC; glucose/mannose transport system permease protein
D PGA1_c23100 putative D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PGA1_c23070 putative ribose transport system permease protein K10440 rbsC; ribose transport system permease protein
D PGA1_c23080 rbsC; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D PGA1_c23060 rbsA2; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PGA1_262p00430 xylF; D-xylose-binding periplasmic protein XylF K10543 xylF; D-xylose transport system substrate-binding protein
D PGA1_262p00440 xylH; xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D PGA1_262p00450 sugar ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D PGA1_c28060 putative sugar transport system, periplasmic protein K10552 frcB; fructose transport system substrate-binding protein
D PGA1_c28050 putative sugar transport system, permease protein K10553 frcC; fructose transport system permease protein
D PGA1_c28040 ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D PGA1_c05230 ABC transporter, extracellular solute-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D PGA1_c05200 putative ABC transporter, inner membrane component K17322 glpP; glycerol transport system permease protein
D PGA1_c05190 ABC transporter, inner membrane component K17323 glpQ; glycerol transport system permease protein
D PGA1_c05220 ugpC3; putative sn-glycerol-3-phosphate import ATP-binding protein UgpC K17324 glpS; glycerol transport system ATP-binding protein
D PGA1_c05210 ugpC2; sn-glycerol-3-phosphate import ATP-binding protein UgbC K17325 glpT; glycerol transport system ATP-binding protein
D PGA1_c02710 sn-glycerol-3-phosphate-binding periplasmic protein ugpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PGA1_c02720 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PGA1_c02730 ugpE; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PGA1_c02740 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgbC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PGA1_c15790 putative phosphate transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PGA1_c34560 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein
D PGA1_c15770 pstC; putative phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PGA1_c15760 pstA; putative phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PGA1_c15750 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PGA1_c04190 phoD; phosphate uptake ABC transporter periplasmic solute-binding protein PhoD K02044 phnD; phosphonate transport system substrate-binding protein
D PGA1_c04200 phoE; phosphate uptake ABC transporter permease protein PhoE K02042 phnE; phosphonate transport system permease protein
D PGA1_c04210 phoT; phosphate uptake ABC transporter permease protein PhoT K02042 phnE; phosphonate transport system permease protein
D PGA1_c04180 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PGA1_c01980 bztA; glutamate/glutamine/aspartate/asparagine-binding protein BztA K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PGA1_c01990 bztB; glutamate/glutamine/aspartate/asparagine transport system permease protein BztB K09970 aapQ; general L-amino acid transport system permease protein
D PGA1_c02000 bztC; glutamate/glutamine/aspartate/asparagine transport system permease protein BztC K09971 aapM; general L-amino acid transport system permease protein
D PGA1_c02010 bztD; glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PGA1_65p00110 putative amino-acid ABC transporter, periplasmic solute-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D PGA1_65p00120 putative amino-acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D PGA1_65p00130 putative amino-acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D PGA1_c02640 putative amino acid binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c12670 conserved hypothetical protein, associated with transport K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c15890 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c16560 extracellular ligand binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c31410 putative receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c32570 putative branched-chain amino acid transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c02590 livH; putative high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c12660 putative high-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c15940 putative branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c16550 putative branched-chain amino acid transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c31440 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c32610 high-affinity branched-chain amino acid transport permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c02600 livM; putative high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c15950 putative branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c16540 putative branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c31450 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c32580 high-affinity branched-chain amino acid transport permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c02610 livG; putative high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c12640 putative high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c15910 putative branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c16530 putative branched-chain amino acid transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c31420 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c32620 high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c02620 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c12630 putative high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c15920 putative branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c16520 putative branched-chain amino acid transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c31430 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c32560 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c30180 ABC transporter extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PGA1_c30170 ABC transporter permease protein K13894 yejB; microcin C transport system permease protein
D PGA1_c30160 ABC transporter permease protein K13895 yejE; microcin C transport system permease protein
D PGA1_c30150 oligopeptide/dipeptide ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PGA1_c25890 putative iron ABC transport system, periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D PGA1_c25900 putative iron ABC transport system, permease protein K23186 fepD; iron-siderophore transport system permease protein
D PGA1_c25910 fepG; ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D PGA1_c25920 fepC; ferric enterobactin transport ATP-binding protein FepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D PGA1_262p02220 ABC transporter, periplasmic solute-binding protein K09815 znuA; zinc transport system substrate-binding protein
D PGA1_c20820 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D PGA1_262p02250 znuB; high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D PGA1_262p02240 znuC; zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PGA1_c32780 mntA; manganese-binding lipoprotein MntA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PGA1_c32760 mntC; manganese transport system membrane protein MntC K11708 troC; manganese/zinc/iron transport system permease protein
D PGA1_c32750 mntD; manganese transport system membrane protein MntD K11709 troD; manganese/zinc/iron transport system permease protein
D PGA1_c32770 mntB; manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PGA1_65p00410 putative olysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PGA1_c24320 putative capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PGA1_65p00420 putative ABC type transporter K09688 kpsM; capsular polysaccharide transport system permease protein
D PGA1_65p00400 ABC transporter, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PGA1_c24310 putative capsular polysaccharide transport system, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PGA1_c21410 lolC; lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D PGA1_c21400 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PGA1_c18865 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D PGA1_c18870 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D PGA1_c18880 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D PGA1_c18890 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PGA1_c19810 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D PGA1_c19820 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D PGA1_c35980 lptB; lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PGA1_c03510 protein insertion permease FtsX-like protein K09811 ftsX; cell division transport system permease protein
D PGA1_c03500 ftsE; putative cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PGA1_c23950 msbA2; putative lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PGA1_c19060 ABC transporter, ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PGA1_78p00460 ABC transporter, transmembrane ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PGA1_c34830 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PGA1_c02440 putative ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PGA1_65p00030 putative type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PGA1_c29350 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS) [PATH:pga02060]
D PGA1_c01200 putative phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D PGA1_c01190 putative PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PGA1_c23500 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PGA1_c35960 ptsN; nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pga03070]
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D PGA1_c18920 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PGA1_c18910 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D PGA1_c01360 putative preprotein translocase, secE subunit K03073 secE; preprotein translocase subunit SecE
D PGA1_c23890 preprotein translocase secG-like protein K03075 secG; preprotein translocase subunit SecG
D PGA1_c01860 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D PGA1_c18930 preprotein translocase YajC-like protein K03210 yajC; preprotein translocase subunit YajC
D PGA1_c02090 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PGA1_c34580 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PGA1_c23570 putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D PGA1_c35180 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D PGA1_c00630 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PGA1_c10700 tatA; putative independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PGA1_c10710 tatB; putative sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PGA1_c10720 tatC; putative sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PGA1_c22830 virB2; putative type IV secretion system protein VirB2 K03197 virB2; type IV secretion system protein VirB2
D PGA1_c22840 putative type IV secretory pathway virB3 protein K03198 virB3; type IV secretion system protein VirB3
D PGA1_c22880 hypothetical protein K03200 virB5; type IV secretion system protein VirB5
D PGA1_c22900 virB9; putative type IV secretion system protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D PGA1_c22940 virB6; putative type IV secretion system protein VirB6 K03201 virB6; type IV secretion system protein VirB6
D PGA1_c22890 virB8; putative type IV secretion system protein VirB8 K03203 virB8; type IV secretion system protein VirB8
D PGA1_c22910 virB10; putative type IV secretion system protein VirB10 K03195 virB10; type IV secretion system protein VirB10
D PGA1_c22850 virB; type IV secretion system protein VirB K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D PGA1_c22920 virB11; putative type IV secretion system protein VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PGA1_c22970 virD4; putative protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pga02020]
D PGA1_c15800 phosphate regulon sensor protein phoR-like protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PGA1_c15730 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PGA1_c28470 putative response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PGA1_c15790 putative phosphate transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PGA1_c34560 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein
D PGA1_c13060 sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PGA1_c34130 petR; protein PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PGA1_c23690 degP; protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D PGA1_c35870 putative flagellin K02406 fliC; flagellin
D PGA1_c35680 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D PGA1_c07920 signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PGA1_c07930 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D PGA1_c07960 putative integral membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PGA1_c32260 putative integral membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PGA1_c07950 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PGA1_c32270 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PGA1_c07940 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PGA1_c32280 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PGA1_c15110 ctaA; heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PGA1_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PGA1_c13760 dltA1; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13780 dltA2; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13380 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PGA1_c01160 chvG; sensor protein ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PGA1_c01150 chvI; transcriptional regulatory protein ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D PGA1_c19640 transcriptional regulator, containing response regulator domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PGA1_c20200 two-component signal transduction system, response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PGA1_78p00580 two-component system sensor-like protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PGA1_c17310 putative fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PGA1_c18980 putative fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PGA1_c06160 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PGA1_c06170 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PGA1_c06150 Flp pilus assembly protein CpaB-like protein K02279 cpaB; pilus assembly protein CpaB
D PGA1_c06140 putative bacterial type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D PGA1_c06120 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PGA1_c06110 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PGA1_c06100 type II secretion system protein F-like protein K12510 tadB; tight adherence protein B
D PGA1_c06090 type II secretion system protein F-like protein K12511 tadC; tight adherence protein C
D PGA1_c26750 glnD; uridylyltransferase GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PGA1_c18710 glnB1; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PGA1_c14780 ntrB; nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PGA1_c14790 ntrC; nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PGA1_c05550 glutamine synthase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11520 puuA1; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11540 puuA2; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c18720 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c23340 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c27180 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c14800 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PGA1_c14810 ntrX; nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c13430 dctB1; C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PGA1_c20700 dctB2; C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PGA1_c20690 dctD2; C4-dicarboxylate transport transcriptional regulatory protein DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PGA1_262p02100 methyltransferase, cheR type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PGA1_c16580 CheR and CheB-like domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PGA1_262p00360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_262p02150 cheD1; methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c05150 mcpA1; chemoreceptor McpA K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c09020 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c11800 mcpA2; chemoreceptor McpA K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c14110 putative chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c18180 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c24960 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c25780 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c27460 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_262p02110 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PGA1_262p02120 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PGA1_262p02090 response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02130 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02160 putative chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PGA1_c08540 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D PGA1_c15240 two-component system histidine kinase / response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PGA1_c15530 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D PGA1_c14360 ctrA; cell cycle response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PGA1_c07780 dctP1; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c12960 putative extracellular solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c13140 putative TRAP transporter extracellular solute binding protein, family 7 K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c20180 dctP2; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c20680 dctP3; C4-dicarboxylate-binding periplasmic protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c27170 dctP4; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c33920 dctP5; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c07770 dctQ1; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c12970 dctQ2; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c13120 dctQ3; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c20670 dctQ4; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c27150 dctQ5; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c33910 dctQ6; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c07760 dctM1; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c12980 dctM2; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c13130 dctM3; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c20660 dctM5; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c27160 dctM6; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c33900 dctM7; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_78p00330 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PGA1_c23680 putative transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PGA1_c09550 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PGA1_c35370 regB; sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PGA1_c35390 regA; photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA
D PGA1_c34000 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PGA1_c33990 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PGA1_c33980 petC; cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D PGA1_c27620 cytochrome c-like protein K08738 CYC; cytochrome c
D PGA1_c30190 cycM; cytochrome c-552 K08738 CYC; cytochrome c
D PGA1_c32000 cytochrome c K08738 CYC; cytochrome c
D PGA1_c30120 ccoN; cytochrome c oxidase subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PGA1_c30110 ccoO; cytochrome c oxidase subunit 2 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PGA1_c30100 cccQ; cytochrome c oxidase subunit 4 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D PGA1_c30090 ccoP; cytochrome c oxidase subunit 3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PGA1_c19670 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PGA1_c19660 cydB; cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D PGA1_262p00580 putative polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D PGA1_65p00200 putative polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D PGA1_c08890 putative capsule polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D PGA1_c24140 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PGA1_c07670 two component regulatory sytem K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PGA1_c19620 two-component system hybrid kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PGA1_c34890 putative histidine-containing phosphotransfer protein K20976 hptB; histidine phosphotransfer protein HptB
D PGA1_c04120 fadA1; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PGA1_c22630 signal transduction histidine kinase
D PGA1_c22730 fadA3; 3-ketoacyl-CoA thiolase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:pga04146]
D PGA1_c29920 alpha-methylacyl-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D PGA1_c02630 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c04160 putative crotonobetaine/carnitine-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c25300 fadD2; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c32630 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c30220 putative NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PGA1_c23940 putative serine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PGA1_c28340 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PGA1_c10340 mvaB; hydroxymethylglutaryl-CoA lyase MvaB K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PGA1_c19110 sodB; superoxide dismutase SodB K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:pga04148]
D PGA1_c16370 arcA; arginase ArcA K01476 rocF; arginase [EC:3.5.3.1]
D PGA1_c03800 putative lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PGA1_c11650 putative lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PGA1_c34000 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pga02024]
D PGA1_c14850 hfq; protein hfq (RNA chaperone hfq) K03666 hfq; host factor-I protein
D PGA1_c16860 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PGA1_c16880 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PGA1_c15860 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase AroH K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PGA1_c03890 raiI; putative acyl-homoserine-lactone synthase RaiI K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PGA1_c03880 raiR; putative transcriptional activator protein RaiR K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D PGA1_c34380 putative spermidine/putrescine transport system extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PGA1_c34360 potC; spermidine/putrescine transport system permease protein PotC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PGA1_c34370 potB; spermidine/putrescine transport system permease protein PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PGA1_c34390 potA; spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PGA1_c02640 putative amino acid binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c12670 conserved hypothetical protein, associated with transport K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c15890 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c16560 extracellular ligand binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c31410 putative receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c32570 putative branched-chain amino acid transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c02590 livH; putative high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c12660 putative high-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c15940 putative branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c16550 putative branched-chain amino acid transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c31440 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c32610 high-affinity branched-chain amino acid transport permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c02600 livM; putative high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c15950 putative branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c16540 putative branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c31450 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c32580 high-affinity branched-chain amino acid transport permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c02610 livG; putative high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c12640 putative high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c15910 putative branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c16530 putative branched-chain amino acid transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c31420 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c32620 high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c02620 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c12630 putative high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c15920 putative branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c16520 putative branched-chain amino acid transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c31430 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c32560 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c02630 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c04160 putative crotonobetaine/carnitine-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c25300 fadD2; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c32630 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_78p00330 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PGA1_c23680 putative transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PGA1_262p01580 putative metal ion uptake regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PGA1_262p02230 zinc uptake regulation protein zur-like protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PGA1_c33340 putative GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PGA1_c08870 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PGA1_262p00300 ABC transporter, extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p00870 ABC transporter, extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p01040 dppA; periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p01700 putative ABC transporter, solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c04440 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c06780 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c10120 gsiB1; putative glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c14180 putative transport system, extracellular solute binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c15010 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c16270 putative periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c22110 gsiB2; putative glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c25450 putative transport system, extracellular solute binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c28450 dppA; putative periplasmic dipeptide transport protein DppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c32060 gsiB3; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c33820 ABC transporter extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c34660 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p00310 gsiC; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p00880 ABC transporter, integral inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p01030 dppB; dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p01710 putative glutathione transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c04430 putative peptide permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c06790 putative peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c10110 gsiC1; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c14170 putative binding-protein-dependent transport system inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c16280 putative dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c22120 gsiC2; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c28430 putative D,D-dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c32080 gsiC3; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p00320 ABC transporter, inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p00890 ABC transporter, integral inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p01020 dppC; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p01720 putative glutathione transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c04420 gsiD1; putative glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c06800 dppC1; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c10100 gsiD2; putative glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c14160 putative glutathione transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c16290 dppC2; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c22130 gsiD3; putative glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c28420 putative D,D-dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c32090 gsiD4; glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p00330 oligopeptide ABC transporter, ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p00900 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p01010 dppD; dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p01730 putative glutathione import ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c04450 gsiA1; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c06810 dppD1; putative dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c10130 gsiA2; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c14150 gsiA3; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c16300 dppD2; dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c22140 gsiA4; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c28410 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c32100 gsiA5; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p00340 oligopeptide ABC transporter, ATP binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_262p01000 dppF; dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_262p01740 putative peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_c06820 dppF; dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_c16310 oligopeptide/dipeptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_c02090 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PGA1_c01360 putative preprotein translocase, secE subunit K03073 secE; preprotein translocase subunit SecE
D PGA1_c23890 preprotein translocase secG-like protein K03075 secG; preprotein translocase subunit SecG
D PGA1_c01860 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D PGA1_c18930 preprotein translocase YajC-like protein K03210 yajC; preprotein translocase subunit YajC
D PGA1_c34580 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PGA1_c23570 putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D PGA1_c35180 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D PGA1_c00630 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PGA1_c02460 hypothetical protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pga02030]
D PGA1_262p00360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_262p02150 cheD1; methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c05150 mcpA1; chemoreceptor McpA K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c09020 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c11800 mcpA2; chemoreceptor McpA K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c14110 putative chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c18180 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c24960 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c25780 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c27460 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c23100 putative D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PGA1_262p02120 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PGA1_262p02110 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PGA1_262p02090 response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02130 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02160 putative chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PGA1_c16580 CheR and CheB-like domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PGA1_262p02170 cheD2; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PGA1_262p02100 methyltransferase, cheR type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PGA1_c18800 fliG; putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PGA1_c12720 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D PGA1_c35620 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PGA1_c35680 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D PGA1_c35560 chemotaxis protein MotB-like protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pga02040]
D PGA1_c35810 fliE; putative flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PGA1_c35640 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PGA1_c18800 fliG; putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PGA1_c35840 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PGA1_c35650 fliL1; putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PGA1_c35750 fliL2; putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PGA1_c12720 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D PGA1_c35620 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PGA1_c35610 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PGA1_c35800 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PGA1_c35720 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PGA1_c35710 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PGA1_c35730 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PGA1_c35770 flgA; putative flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PGA1_c35830 flgB; putative flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PGA1_c35820 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PGA1_c35910 putative flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PGA1_c35570 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PGA1_c35790 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PGA1_c35780 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PGA1_c35760 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PGA1_c35600 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PGA1_c35890 putative rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D PGA1_c35580 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PGA1_c35590 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D PGA1_c35870 putative flagellin K02406 fliC; flagellin
D PGA1_c35680 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D PGA1_c35560 chemotaxis protein MotB-like protein K02557 motB; chemotaxis protein MotB
D PGA1_c08800 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PGA1_c35900 putative flagellar hook-length control protein
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PGA1_c11420 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:pga04981]
D PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PGA1_c21170 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PGA1_c11870 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c24580 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PGA1_c21180 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PGA1_c13370 putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c16040 pterin binding domain-containing protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:pga04980]
D PGA1_c01260 putative cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PGA1_c24180 argK; LAO/AO transport system kinase ArgK K07588 MMAA; GTPase [EC:3.6.5.-]
D PGA1_c21510 bhbA; methylmalonyl-CoA mutase BhbA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PGA1_c13370 putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PGA1_c16040 pterin binding domain-containing protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D PGA1_c36340 hutH; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pga01501]
D PGA1_c33380 opmA; porin K08720 ompU; outer membrane protein OmpU
D PGA1_c11160 putative beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PGA1_c33790 putative HTH-type transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D PGA1_c05170 penicillinase repressor blaI/mecI-like protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PGA1_c09800 bla; beta-lactamase Bla K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D PGA1_c20280 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PGA1_c26530 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PGA1_c09510 putative peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pga01502]
D PGA1_c09660 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PGA1_c10880 alr; alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D PGA1_c09530 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PGA1_c09540 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PGA1_c09610 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pga01503]
D PGA1_262p00030 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_262p00640 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_262p01050 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_65p00260 putative metallopeptidase K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c17480 hemolysin-type calcium-binding repeat-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c21610 putative serralysin K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c36250 putative metallopeptidase K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c20290 amiC; putative N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PGA1_c23690 degP; protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D PGA1_c14310 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PGA1_c13760 dltA1; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13780 dltA2; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13380 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PGA1_c18150 hypothetical protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pga01000]
C 01001 Protein kinases [BR:pga01001]
D PGA1_c23220 hipA; protein HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PGA1_c23240 protein hipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PGA1_c30890 putative HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PGA1_262p00710 serine/threonine-protein kinase RsbT-like protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D PGA1_c33200 putative serine-protein kinase (anti-sigma-B factor) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PGA1_262p00090 putative exopolysaccharide biosynthesis transport protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PGA1_c05270 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PGA1_c15800 phosphate regulon sensor protein phoR-like protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PGA1_c13060 sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PGA1_c07920 signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PGA1_c01160 chvG; sensor protein ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PGA1_78p00580 two-component system sensor-like protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PGA1_c20190 two-component signal transduction system, histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PGA1_c14780 ntrB; nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PGA1_c14800 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PGA1_c13430 dctB1; C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PGA1_c20700 dctB2; C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PGA1_c27600 putative signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PGA1_262p02120 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PGA1_c15240 two-component system histidine kinase / response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PGA1_c35370 regB; sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PGA1_c07670 two component regulatory sytem K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PGA1_c19620 two-component system hybrid kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PGA1_c27060 putative signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pga01009]
D PGA1_c35420 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PGA1_c36160 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pga01002]
D PGA1_c32850 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PGA1_c06060 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PGA1_c14610 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PGA1_c09920 putative gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D PGA1_c28350 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D PGA1_c10810 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PGA1_c36100 gltB; glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PGA1_c10230 glmS; glucosamine--fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PGA1_c27890 putative hexosephosphate binding protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PGA1_c29110 pfpI; intracellular protease PfpI K05520 yhbO; deglycase [EC:3.5.1.124]
D PGA1_c34770 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D PGA1_c16010 putative L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D PGA1_c00480 hypothetical protein K07052 K07052; CAAX protease family protein
D PGA1_c31700 protease-like protein K07052 K07052; CAAX protease family protein
D PGA1_c09880 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PGA1_c26590 dcp; peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PGA1_c07470 putative oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PGA1_262p00030 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_262p00640 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_262p01050 hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_65p00260 putative metallopeptidase K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c17480 hemolysin-type calcium-binding repeat-containing protein K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c21610 putative serralysin K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c36250 putative metallopeptidase K01406 prtC; serralysin [EC:3.4.24.40]
D PGA1_c32810 peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D PGA1_c32820 peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D PGA1_c19800 pepA; cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PGA1_c31530 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PGA1_262p01450 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_262p01800 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c16260 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c19430 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c36420 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PGA1_c29230 map; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PGA1_262p00350 metallopeptidase, family M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PGA1_c09760 putative aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PGA1_c15120 thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PGA1_c05970 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PGA1_c14260 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PGA1_c31940 mepA; penicillin-insensitive murein endopeptidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PGA1_c02420 hypothetical protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D PGA1_c24590 trypsin-like protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D PGA1_c29680 serine protease-like protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D PGA1_c29690 serine protease-like protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D PGA1_c23690 degP; protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D PGA1_c08020 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PGA1_c26270 putative D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PGA1_c12520 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PGA1_c20540 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PGA1_c16940 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PGA1_c01050 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PGA1_c34670 pip; proline iminopeptidase Pip K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PGA1_c02790 putative carboxy-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PGA1_c14870 quiP; acyl-homoserine lactone acylase QuiP K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PGA1_c11740 rhomboid protein-like protein K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D PGA1_c17830 putative gene transfer agent prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PGA1_c22420 putative phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PGA1_c25870 putative phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D PGA1_c35260 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PGA1_c28250 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c33210 putative gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PGA1_c33480 pmbA; protein PmbA K03592 pmbA; PmbA protein
D PGA1_c06240 tldD; protein TldD K03568 tldD; TldD protein
D PGA1_c31870 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D PGA1_c23700 hflC; protein HflC K04087 hflC; modulator of FtsH protease HflC
D PGA1_c23710 hflK; putative protein HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pga01003]
D PGA1_c36110 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c31860 pbpC; penicillin-binding protein PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PGA1_c20280 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PGA1_c09600 ftsw; cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c26540 mrdB; rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c12300 mdoH; glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D PGA1_262p00100 putative glycosyl transferase K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D PGA1_262p00120 exoL; succinoglycan biosynthesis protein ExoL K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-]
D PGA1_262p00110 putative glycosyl transferase K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-]
D PGA1_262p00050 putative glycosyl transferase K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]
D PGA1_262p00060 putative glycosyl transferase K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pga01005]
D PGA1_c14310 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PGA1_c14330 lpxB; lipid-A-disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PGA1_c09700 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PGA1_c16000 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PGA1_c14320 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PGA1_c33510 lpxK; tetraacyldisaccharide 4'-kinase LpxK K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PGA1_c18810 putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PGA1_c10190 waaA; 3-deoxy-D-manno-octulosonic-acid transferase WaaA K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PGA1_c33500 3-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PGA1_c04940 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D PGA1_c24330 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase KdsA K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PGA1_c34490 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PGA1_c36010 kdsD; arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PGA1_c10180 lpcC; lipopolysaccharide core biosynthesis mannosyltransferase LpcC K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D PGA1_c27850 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pga01011]
D PGA1_c31220 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PGA1_c09650 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PGA1_c09620 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PGA1_c09560 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PGA1_c09520 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PGA1_c09660 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PGA1_c10880 alr; alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D PGA1_c17060 putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PGA1_c09540 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PGA1_c09610 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PGA1_c36070 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PGA1_c26760 mviN; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PGA1_c20280 mrcA; penicillin-binding protein 1A MrcA K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PGA1_c31860 pbpC; penicillin-binding protein PbpC K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PGA1_c26530 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PGA1_c09510 putative peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PGA1_c08020 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PGA1_c26270 putative D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PGA1_c36110 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c09600 ftsw; cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c26540 mrdB; rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c34770 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D PGA1_c16010 putative L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D PGA1_c31940 mepA; penicillin-insensitive murein endopeptidase MepA K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PGA1_c28940 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PGA1_c35210 putative membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PGA1_262p00650 putative lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PGA1_c36460 putative lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PGA1_c17880 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PGA1_c20290 amiC; putative N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PGA1_c21950 amiD; putative N-acetylmuramoyl-L-alanine amidase AmiD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pga01004]
D PGA1_c17940 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c33630 malonyl CoA-acyl carrier protein transacylase-like protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PGA1_c11240 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c13630 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c13690 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c13730 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PGA1_c04650 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase FabB K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PGA1_c17890 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PGA1_c10650 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c17930 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c31980 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PGA1_c04660 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PGA1_c14300 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PGA1_c04640 fabI1; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c16810 fabI2; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PGA1_c04150 thioesterase domain-containing protein K17362 ACOT13; acyl-coenzyme A thioesterase 13 [EC:3.1.2.-]
D PGA1_c26370 putative acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PGA1_c15680 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PGA1_c17310 putative fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PGA1_c18980 putative fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PGA1_c10300 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c12950 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PGA1_c11900 prpE; propionate-CoA ligase PrpE K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PGA1_c02630 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c04160 putative crotonobetaine/carnitine-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c25300 fadD2; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c32630 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_262p01840 ATP-dependent AMP binding enzyme K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PGA1_c22180 fadD1; long-chain-fatty-acid--CoA ligase FadD K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D PGA1_c03860 putative glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PGA1_c11250 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PGA1_c03010 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PGA1_c03520 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pga01008]
D PGA1_78p00430 putative AMP-dependent synthetase and ligase K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62]
D PGA1_78p00440 hypothetical protein K24112 asbE; petrobactin synthase [EC:2.-.-.-]
D PGA1_c25500 putative amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PGA1_c33730 putative aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pga01006]
D PGA1_c34160 ispA; geranyltranstransferase IspA K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PGA1_c03350 ispB; octaprenyl-diphosphate synthase IspB K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PGA1_c14230 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PGA1_c16450 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PGA1_c14200 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PGA1_c02940 ubiA; 4-hydroxybenzoate octaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PGA1_c06260 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pga01007]
D PGA1_c26240 putative lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PGA1_c16960 gltX1; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c26430 gltX2; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c14410 putative glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PGA1_c11340 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PGA1_c26770 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PGA1_c16470 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PGA1_c11140 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PGA1_c08340 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PGA1_c05710 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PGA1_c11630 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PGA1_c33400 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PGA1_c24530 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PGA1_c29890 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PGA1_c06470 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PGA1_c06500 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PGA1_c18960 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PGA1_c21420 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PGA1_c20990 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PGA1_c15270 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PGA1_c07010 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PGA1_c07030 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PGA1_c21250 aatA; aspartate aminotransferase AatA K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_c29420 tyrB; aromatic-amino-acid aminotransferase TyrB K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PGA1_262p02330 putative aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D PGA1_c23930 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c25240 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PGA1_c34330 kbl; 2-amino-3-ketobutyrate coenzyme A ligase Kbl K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PGA1_c20350 hemA; 5-aminolevulinate synthase HemA K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D PGA1_c09130 bioF; 8-amino-7-oxononanoate synthase BioF K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PGA1_c00860 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PGA1_c24230 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PGA1_c34400 aminotransferase class-III K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D PGA1_c09150 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PGA1_c28770 tpa; taurine--pyruvate aminotransferase Tpa K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D PGA1_c30460 dat; D-alanine aminotransferase Dat K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D PGA1_c04020 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34110 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c34960 putative branched-chain-amino-acid aminotransferase, subunit A K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PGA1_c23940 putative serine-glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D PGA1_c36150 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pga00194]
D PGA1_c25080 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PGA1_c25090 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PGA1_c25100 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PGA1_c25110 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PGA1_c25120 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PGA1_c00730 atpX; ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PGA1_c00740 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PGA1_c00720 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PGA1_c00710 atpB; ATP synthase a chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PGA1_c00700 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pga03000]
D PGA1_c09390 naeIM; modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c22570 cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c02800 putative transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PGA1_c14190 putative transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PGA1_c30530 HTH-type transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D PGA1_c02760 putative methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PGA1_c29030 HTH-type transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PGA1_c12510 transcriptional regulator, AraC family K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D PGA1_262p01480 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D PGA1_c15870 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D PGA1_c25530 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D PGA1_262p00200 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_262p01360 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_c03380 putative glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_c15720 putative glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_c22770 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_c24570 HTH-type transcriptional regulator, LysR type K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_c27230 transcriptional regulator, lysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PGA1_c02580 putative HTH-type transcriptional regulator pcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D PGA1_c11710 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PGA1_78p00220 transcriptional regulatory protein, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D PGA1_78p00040 oxyR; hydrogen peroxide-inducible genes activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PGA1_c21740 transcriptional regulator, ArgP family K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D PGA1_c33790 putative HTH-type transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D PGA1_262p00990 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D PGA1_c33710 HTH-type transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D PGA1_c33740 HTH-type transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D PGA1_c08250 putative glycerol-3-phosphate regulon repressor glpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PGA1_c23250 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PGA1_c23400 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PGA1_c31340 HTH-type transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PGA1_78p00150 putative HTH-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PGA1_c07190 transcriptional regulator, IclR family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PGA1_c07800 putative transcriptional regulator, lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PGA1_c07850 transcriptional regulator, lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PGA1_c13990 putative transcriptional regulator, iacl family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PGA1_c33870 putative HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PGA1_c04230 putative phosphonates metabolism transcriptional regulator phnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D PGA1_c36370 HTH-type transcriptional regulator, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PGA1_c27900 ligand-binding UTRA domain-containing protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PGA1_c13080 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D PGA1_c00760 putative pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PGA1_262p01530 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PGA1_c28810 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PGA1_c28300 transcriptional regulator, GntR family K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D PGA1_c21120 transcriptional regulator, GntR fmaily K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D PGA1_c21700 betI; HTH-type transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PGA1_c12830 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D PGA1_c30430 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PGA1_c17200 transcriptional regulator, TetR family K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D PGA1_262p00180 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_262p00760 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c04500 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c06600 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c07130 putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c11760 putative proline dehydrogenase transcriptional activator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c16610 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c19400 putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c20490 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c30410 HTH-type transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c30510 putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c06590 putative transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PGA1_c20730 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PGA1_c25250 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PGA1_c03880 raiR; putative transcriptional activator protein RaiR K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D PGA1_c12190 transcriptional regulator, MarR family K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D PGA1_c34090 ohrR; organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PGA1_c02530 hmrR; HTH-type transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PGA1_c03310 soxR1; redox-sensitive transcriptional activator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D PGA1_c11400 fur; ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PGA1_262p01580 putative metal ion uptake regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PGA1_262p02230 zinc uptake regulation protein zur-like protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PGA1_c04670 putative metal ion uptake regulator K09826 irr; Fur family transcriptional regulator, iron response regulator
D PGA1_c07170 acetate operon repressor-like protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PGA1_c05540 transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D PGA1_78p00330 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PGA1_c23680 putative transcriptional regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PGA1_c19680 putative transcriptional regulator, crp family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PGA1_c30140 fnrL; transcriptional activator protein FnrL K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PGA1_262p01250 transcriptional regulator, crp family K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D PGA1_c15350 putative transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PGA1_78p00090 putative HTH-type transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PGA1_c26400 putative HTH-type transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PGA1_c28800 putative HTH-type transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PGA1_c15000 putative transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PGA1_c12380 soxR2; regulatory protein SoxR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D PGA1_c21630 putative transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D PGA1_c12680 transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D PGA1_c29470 puttative helix-turn-helix protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D PGA1_c05170 penicillinase repressor blaI/mecI-like protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PGA1_c10560 birA; biotin-[acetyl-CoA-carboxylase] synthetase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PGA1_c11010 hypothetical protein K07726 K07726; putative transcriptional regulator
D PGA1_c11750 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PGA1_c09820 hypothetical protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PGA1_262p00020 plamid partition protein-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_65p00460 putative plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_78p00600 putative parB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c19310 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c35070 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c07540 transcription factor carD-like protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PGA1_262p00420 hypothetical protein K15545 mlc; transcriptional regulator of PTS gene
D PGA1_c35020 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PGA1_c26840 putative phenylacetic acid degradation operon negative regulatory protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D PGA1_c03130 hypothetical protein K07735 algH; putative transcriptional regulator
D PGA1_c11040 dksA; dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PGA1_c24050 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D PGA1_c08860 nrdR; transcriptional repressor K07738 nrdR; transcriptional repressor NrdR
D PGA1_c09480 mraZ; putative protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pga03021]
D PGA1_c01900 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PGA1_c01430 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PGA1_c01440 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PGA1_c01000 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PGA1_c08800 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PGA1_c27510 RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PGA1_c09010 rpoH1; RNA polymerase sigma-32 factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PGA1_c26660 rpoH2; RNA polymerase sigma-32 factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PGA1_c34640 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PGA1_c08940 nusB; N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB
D PGA1_c01370 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PGA1_262p00710 serine/threonine-protein kinase RsbT-like protein K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D PGA1_262p00700 stressosome protein rsbS-like protein K17762 rsbS; rsbT antagonist protein RsbS
D PGA1_262p00690 stressosome protein rsbRA-like protein K17763 rsbR; rsbT co-antagonist protein RsbR
D PGA1_c34880 putative response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PGA1_c33190 putative anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D PGA1_c33200 putative serine-protein kinase (anti-sigma-B factor) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PGA1_c11040 dksA; dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PGA1_c24050 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D PGA1_c03290 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PGA1_c35120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pga03019]
D PGA1_c13450 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PGA1_c01060 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PGA1_c10580 rnjA; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PGA1_c36430 putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PGA1_c11390 rhlE2; putative ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PGA1_c09790 deaD; cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PGA1_c31900 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PGA1_c11420 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PGA1_c33000 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PGA1_c35120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PGA1_c34530 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PGA1_c24920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PGA1_c14850 hfq; protein hfq (RNA chaperone hfq) K03666 hfq; host factor-I protein
D PGA1_c14540 putative polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PGA1_c30390 putative polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PGA1_c34840 putative tRNA-nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PGA1_c29090 rppH; RNA pyrophosphohydrolase RppH K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PGA1_c01180 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D PGA1_c24190 hrpB; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pga03011]
D PGA1_c04830 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PGA1_c15570 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PGA1_c01620 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PGA1_c25280 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PGA1_c01770 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PGA1_c18090 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PGA1_c01500 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PGA1_c01740 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PGA1_c14520 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PGA1_c01540 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PGA1_c01890 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PGA1_c01490 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PGA1_c01880 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PGA1_c01730 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PGA1_c32980 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PGA1_c00570 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PGA1_c01690 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PGA1_c18100 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PGA1_c01600 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PGA1_c36510 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PGA1_c30380 rpsU2; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PGA1_c01400 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PGA1_c01590 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PGA1_c01550 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PGA1_c01560 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PGA1_c01720 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PGA1_c01750 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PGA1_c18110 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PGA1_c01410 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PGA1_c01380 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PGA1_c01420 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PGA1_c14510 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PGA1_c01700 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PGA1_c01850 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PGA1_c01630 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PGA1_c01910 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PGA1_c01760 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PGA1_c00510 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PGA1_c07000 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PGA1_c15470 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PGA1_c01610 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PGA1_c01570 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PGA1_c01710 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PGA1_c15480 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PGA1_c24170 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PGA1_c01680 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PGA1_c01780 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PGA1_c00500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PGA1_c11255 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PGA1_c21940 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PGA1_c02150 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PGA1_c06990 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PGA1_c32500 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PGA1_c04910 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PGA1_c00110 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c25700 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c28650 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c32370 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c00140 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c25670 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c28620 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c32340 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c00150 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c25660 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c28610 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c32330 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pga03009]
D PGA1_c01060 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PGA1_c01070 era; GTP-binding protein Era K03595 era; GTPase
D PGA1_c15500 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D PGA1_c11040 dksA; dnaK suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D PGA1_c24050 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D PGA1_c34640 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PGA1_c08940 nusB; N utilization substance protein B-like protein K03625 nusB; transcription antitermination protein NusB
D PGA1_c01370 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PGA1_c19860 ksgA; dimethyladenosine transferase KsgA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PGA1_c15230 rRNA methyltransferase-like protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PGA1_c29990 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PGA1_c29260 rsmD; ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PGA1_c02950 RNA methyltransferase-like protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PGA1_c35090 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PGA1_c09490 mraW; S-adenosyl-L-methionine-dependent methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PGA1_c26730 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PGA1_c09200 rlmB; putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PGA1_c16080 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PGA1_c29750 putative ribosomal RNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PGA1_c19990 rlmI; ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PGA1_c26480 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PGA1_c36240 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PGA1_c34810 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PGA1_c33080 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PGA1_c22020 putative ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PGA1_c01950 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PGA1_c09000 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PGA1_c16410 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PGA1_c03980 putative acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PGA1_c06330 putative ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PGA1_c00540 rimM; putative 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PGA1_c24370 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PGA1_c05820 prmA; ribosomal protein L11 methyltransferase PrmA K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PGA1_c13450 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PGA1_c19190 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PGA1_c09790 deaD; cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PGA1_c10970 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PGA1_c18990 engA; GTP-binding protein EngA K03977 engA; GTPase
D PGA1_c14860 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D PGA1_c03140 putative tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PGA1_c01010 spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PGA1_c32930 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PGA1_c34650 yhbC; UPF0090 protein YhbC K09748 rimP; ribosome maturation factor RimP
D PGA1_c29760 hypothetical protein K09710 ybeB; ribosome-associated protein
D PGA1_c04750 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D PGA1_c35970 putative sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D PGA1_c04950 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:pga03016]
D PGA1_c30320 putative ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D PGA1_c16960 gltX1; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c26430 gltX2; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c21420 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PGA1_c05710 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PGA1_c33400 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PGA1_c08340 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PGA1_c11140 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PGA1_c24530 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PGA1_c15270 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PGA1_c20990 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PGA1_c18960 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PGA1_c16470 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PGA1_c11630 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PGA1_c29890 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PGA1_c07010 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PGA1_c07030 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PGA1_c11340 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PGA1_c26770 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PGA1_c22100 dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PGA1_c13970 threonyl/alanyl tRNA synthetase-like protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D PGA1_c06720 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PGA1_c04710 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PGA1_c33960 MiaB-like tRNA modifying enzyme K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
D PGA1_c04800 trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PGA1_c05650 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PGA1_c32950 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PGA1_c15360 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PGA1_c03140 putative tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PGA1_c14200 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PGA1_c35110 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PGA1_c35100 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PGA1_c12210 putative selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PGA1_c34500 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PGA1_c02140 putative ribonuclease P component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PGA1_c35030 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PGA1_c13290 putative ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PGA1_c36020 putative 3'-5'-exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PGA1_c26300 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PGA1_c26240 putative lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D PGA1_c06470 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PGA1_c06500 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PGA1_c14410 putative glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PGA1_c00650 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PGA1_c22010 tadA; tRNA-specific adenosine deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PGA1_c19230 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PGA1_c14770 dusB; tRNA-dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PGA1_c15100 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D PGA1_c14430 trmFO; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PGA1_c00520 trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PGA1_c33080 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PGA1_c14340 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PGA1_c02110 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PGA1_c13460 putative sulfurtransferase K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PGA1_c20640 iscA; iron-binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D PGA1_c23960 tRNA-modifying protein ygfZ-like protein K06980 ygfZ; tRNA-modifying protein YgfZ
D PGA1_c17420 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PGA1_c05600 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PGA1_c05610 queD; putative queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PGA1_c05620 queE; putative 7-cyano-7-deazaguanosine biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PGA1_c05630 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PGA1_c34310 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PGA1_c12200 selU; tRNA 2-selenouridine synthase SelU K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PGA1_c20570 tgt; queuine tRNA-ribosyltransferase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PGA1_c05960 putative tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PGA1_c03990 putative peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PGA1_c35490 putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PGA1_c35350 uncharacterized P-loop hydrolase UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PGA1_c36430 putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PGA1_c33000 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pga03012]
D PGA1_c34620 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PGA1_c20840 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PGA1_c19760 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PGA1_c15580 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PGA1_c01320 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D PGA1_c01520 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D PGA1_c00640 putative elongation factor G K02355 fusA; elongation factor G
D PGA1_c01510 fusA; elongation factor G K02355 fusA; elongation factor G
D PGA1_c19890 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PGA1_c14220 frr; ribosome-recycling factor Frr K02838 frr; ribosome recycling factor
D PGA1_c19880 methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PGA1_c04900 pth; peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PGA1_c31130 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PGA1_c23980 efp; translation elongation factor P K02356 efp; elongation factor P
D PGA1_c20270 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PGA1_c10620 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PGA1_c31970 peptidyl-tRNA hydrolase-like protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pga03110]
D PGA1_c25150 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PGA1_c32440 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PGA1_c12530 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PGA1_c35240 hslU; ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PGA1_c34530 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PGA1_c12490 heat shock protein (HSP 70)-like protein K04046 yegD; hypothetical chaperone protein
D PGA1_c24920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PGA1_c34540 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PGA1_c21480 dnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein
D PGA1_c34860 hslO; 33 kDa chaperonin (heat shock protein 33) K04083 hslO; molecular chaperone Hsp33
D PGA1_c35010 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D PGA1_c29670 ibpA2; small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA
D PGA1_c07520 putative heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PGA1_c24930 groS; chaperonin GroS K04078 groES; chaperonin GroES
D PGA1_c23690 degP; protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D PGA1_c05970 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PGA1_c00710 atpB; ATP synthase a chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PGA1_c35180 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D PGA1_c24150 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D PGA1_c16850 putative peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PGA1_c34590 putative peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PGA1_c19840 putative chaperone surA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PGA1_c35300 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D PGA1_c26330 putative thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D PGA1_c33230 thioredoxin-like protein K05838 ybbN; putative thioredoxin
D PGA1_c34710 grxC; glutaredoxin GrxC K03676 grxC; glutaredoxin 3
D PGA1_c17180 putative glutaredoxin K07390 grxD; monothiol glutaredoxin
D PGA1_c18860 ccmG; thiol:disulfide interchange protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pga04131]
D PGA1_c19750 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c05510 gapA; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c17250 gapB; glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c27490 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c06970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PGA1_c31930 putative transporter, MFS family K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:pga03032]
D PGA1_c00930 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PGA1_c09390 naeIM; modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c22570 cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c34260 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PGA1_c11230 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PGA1_c04840 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PGA1_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PGA1_c10890 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PGA1_c08790 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D PGA1_c14120 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D PGA1_c28090 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PGA1_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c22550 DNA polymerase III beta subunit-like protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c19790 putative DNA polymerase III chi subunit, holC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PGA1_c33420 DNA polymerase 3-like protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PGA1_c08000 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PGA1_c35170 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PGA1_c30260 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PGA1_c33580 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PGA1_c31780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PGA1_c14370 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PGA1_c15140 gyrA; DNA gyrase subunit GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PGA1_c00070 gyrB; DNA gyrase subunit GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PGA1_c01300 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PGA1_c21350 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PGA1_262p00530 DNA topoisomerase 1B-like protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PGA1_c06220 topA; DNA topoisomerase TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pga03036]
D PGA1_c09390 naeIM; modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c22570 cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c01060 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c03830 putative regulatory protein, H-NS histone family K03746 hns; DNA-binding protein H-NS
D PGA1_c34260 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PGA1_c11230 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PGA1_c04840 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PGA1_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PGA1_c33220 hemimethylated DNA-binding protein, YccV-like protein K11940 hspQ; heat shock protein HspQ
D PGA1_262p00250 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D PGA1_c27100 putative ferritin K04047 dps; starvation-inducible DNA-binding protein
D PGA1_c14850 hfq; protein hfq (RNA chaperone hfq) K03666 hfq; host factor-I protein
D PGA1_c21740 transcriptional regulator, ArgP family K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D PGA1_262p00180 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_262p00760 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c04500 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c06600 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c07130 putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c11760 putative proline dehydrogenase transcriptional activator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c16610 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c19400 putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c20490 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c30410 HTH-type transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c30510 putative leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PGA1_c00780 sMC; putative chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D PGA1_c11170 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D PGA1_c11180 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D PGA1_c09680 ftsA; celldivision protein FtsA K03590 ftsA; cell division protein FtsA
D PGA1_c03500 ftsE; putative cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PGA1_c09510 putative peptidoglycan synthetase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PGA1_c33290 ftsK; putative DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PGA1_c09500 hypothetical protein K03586 ftsL; cell division protein FtsL
D PGA1_c09670 ftsQ; putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PGA1_c09600 ftsw; cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c03510 protein insertion permease FtsX-like protein K09811 ftsX; cell division transport system permease protein
D PGA1_c09690 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PGA1_c17210 cell division protein ZapA-like protein K09888 zapA; cell division protein ZapA
D PGA1_c31670 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D PGA1_c20290 amiC; putative N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PGA1_c26500 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PGA1_c26510 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PGA1_c26520 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D PGA1_c26540 mrdB; rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_65p00470 putative plasmid partition protein A K03496 parA; chromosome partitioning protein
D PGA1_78p00610 putative plasmid partition protein A K03496 parA; chromosome partitioning protein
D PGA1_c00490 hypothetical protein K03496 parA; chromosome partitioning protein
D PGA1_c35080 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PGA1_262p00020 plamid partition protein-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_65p00460 putative plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_78p00600 putative parB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c19310 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c35070 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c01300 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PGA1_c21350 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PGA1_c35100 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PGA1_c35090 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PGA1_c14430 trmFO; methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PGA1_c05760 xerC; putative tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PGA1_c14060 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PGA1_c09470 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PGA1_c27720 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PGA1_c02070 engB; putative GTP binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pga03400]
D PGA1_c05730 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PGA1_c13910 phrB; deoxyribodipyrimidine photo-lyase PhrB K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PGA1_c16900 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PGA1_c33540 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PGA1_c29040 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PGA1_c03110 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PGA1_c32460 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PGA1_c34610 putative mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PGA1_c34870 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PGA1_c26630 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PGA1_c02760 putative methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PGA1_c29030 HTH-type transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PGA1_c00350 hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D PGA1_c34520 alkB; alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D PGA1_262p00560 uracil DNA glycosylase-like protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PGA1_c03070 putative uracil DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PGA1_c16430 putative DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PGA1_c22000 putative DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PGA1_c36490 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PGA1_c11070 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PGA1_c33320 putative exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PGA1_c08630 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PGA1_c14370 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PGA1_c31780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PGA1_c17370 uvrA; uvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D PGA1_c26160 uvrB; uvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D PGA1_c02880 uvrC; uvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PGA1_c09450 uvrD; DNA helicase II UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PGA1_c01430 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PGA1_c01440 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PGA1_c01900 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PGA1_c01000 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PGA1_c14920 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PGA1_c35000 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PGA1_c32740 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PGA1_c23600 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PGA1_c34150 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PGA1_c28090 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PGA1_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c22550 DNA polymerase III beta subunit-like protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PGA1_c19790 putative DNA polymerase III chi subunit, holC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PGA1_c33420 DNA polymerase 3-like protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PGA1_c08000 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PGA1_c35170 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PGA1_c30260 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PGA1_c14120 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D PGA1_c15260 recA; protein recA (recombinase A) K03553 recA; recombination protein RecA
D PGA1_c05860 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PGA1_c05870 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PGA1_c05850 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PGA1_c05790 priA; primosomal protein N K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PGA1_c10840 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PGA1_c00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PGA1_c14380 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PGA1_c01090 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PGA1_c30290 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PGA1_c09720 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PGA1_c35310 addA; double strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PGA1_c15960 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PGA1_c15140 gyrA; DNA gyrase subunit GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PGA1_c00070 gyrB; DNA gyrase subunit GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PGA1_262p00530 DNA topoisomerase 1B-like protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PGA1_c06220 topA; DNA topoisomerase TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PGA1_c34260 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PGA1_c11230 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PGA1_c04840 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PGA1_c31900 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PGA1_c03830 putative regulatory protein, H-NS histone family K03746 hns; DNA-binding protein H-NS
D PGA1_c32470 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PGA1_c16940 lexA; lexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PGA1_c00340 hypothetical protein K14160 imuA; protein ImuA
D PGA1_c00330 protein imuB-like protein K14161 imuB; protein ImuB
D PGA1_c00320 dnaE1; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PGA1_c06040 putative DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PGA1_c06940 putative adenosylcobalamin(B12)-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PGA1_c16760 nrdJ; vitamin B12-dependent ribonucleotide reductase NrdJ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pga03029]
D PGA1_c33990 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D PGA1_c34620 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PGA1_c20840 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PGA1_c15580 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PGA1_c01320 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D PGA1_c01520 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D PGA1_c00640 putative elongation factor G K02355 fusA; elongation factor G
D PGA1_c01510 fusA; elongation factor G K02355 fusA; elongation factor G
D PGA1_c07510 DNA/RNA helicase-like protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D PGA1_c01070 era; GTP-binding protein Era K03595 era; GTPase
D PGA1_c11340 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PGA1_c33400 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PGA1_c24530 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PGA1_c11140 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PGA1_c21970 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PGA1_c33270 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PGA1_c09840 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PGA1_c21980 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PGA1_c14120 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D PGA1_c14280 omp; outer membrane protein Omp K07277 SAM50; outer membrane protein insertion porin family
D PGA1_c34530 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PGA1_c35010 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D PGA1_c24920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PGA1_c24930 groS; chaperonin GroS K04078 groES; chaperonin GroES
D PGA1_c34540 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PGA1_c15360 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PGA1_c17180 putative glutaredoxin K07390 grxD; monothiol glutaredoxin
D PGA1_c09470 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PGA1_c27720 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PGA1_c06260 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D PGA1_c06280 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PGA1_c15110 ctaA; heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D PGA1_c02090 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PGA1_c06300 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D PGA1_c07150 hypothetical protein K07152 SCO1; protein SCO1
D PGA1_c35380 senC; regulatory protein SenC K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pga02000]
D PGA1_c23950 msbA2; putative lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PGA1_c19060 ABC transporter, ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D PGA1_78p00460 ABC transporter, transmembrane ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PGA1_c34830 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PGA1_c22190 msbA1; lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PGA1_c34820 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PGA1_c02440 putative ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PGA1_65p00030 putative type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PGA1_c29350 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PGA1_c11290 putative holdfast attachment protein C K15738 uup; ABC transport system ATP-binding/permease protein
D PGA1_262p02180 modA; molybdate-binding periplasmic protein ModA K02020 modA; molybdate transport system substrate-binding protein
D PGA1_262p02190 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D PGA1_262p02200 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PGA1_c27750 hypothetical protein K05772 tupA; tungstate transport system substrate-binding protein
D PGA1_c27770 putative ABC transporter inner membrane component K05773 tupB; tungstate transport system permease protein
D PGA1_c27760 ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D PGA1_c07910 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D PGA1_c32510 futA; iron uptake protein FutA K02012 afuA; iron(III) transport system substrate-binding protein
D PGA1_c32540 sfuB; putative Fe(3+)-transport system protein SfuB K02011 afuB; iron(III) transport system permease protein
D PGA1_c10670 putative putrescine transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PGA1_c34050 thiB; thiamine-binding periplasmic protein ThiB K02064 thiB; thiamine transport system substrate-binding protein
D PGA1_c34040 thiP; thiamine transport system permease protein ThiP K02063 thiP; thiamine transport system permease protein
D PGA1_c34030 thiQ; thiamine import ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PGA1_c31310 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PGA1_c31280 ABC transporter permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PGA1_c31290 ABC transporter ATP-binding protein K11071 potB; spermidine/putrescine transport system permease protein
D PGA1_c31300 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PGA1_c34420 potF; putrescine-binding periplasmic protein PotF K11073 potF; putrescine transport system substrate-binding protein
D PGA1_c34450 potI; putrescine transport system permease protein PotI K11074 potI; putrescine transport system permease protein
D PGA1_c34440 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D PGA1_c34430 potG; putrescine transport ATP-binding protein PotG K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PGA1_c34380 putative spermidine/putrescine transport system extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PGA1_c34360 potC; spermidine/putrescine transport system permease protein PotC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PGA1_c34370 potB; spermidine/putrescine transport system permease protein PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PGA1_c34390 potA; spermidine/putrescine import ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PGA1_c22800 opuAC; glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c23260 glycine betaine transport system, substrate binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c25570 putative glycine betaine transport system, substrate binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c33750 putative glycine betaine transport system substrate binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PGA1_c00290 proW; glycine betaine/L-proline transport system permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c22790 opuAB; glycine betaine transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c23280 amino acid transport sytem, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c25580 putative glycine betaine/L-proline transport system permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c33770 putative ABC transporter permease protein K02001 proW; glycine betaine/proline transport system permease protein
D PGA1_c22780 opuAA; glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c23270 amino acid transport sytem, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c25590 putative glycine betaine/L-proline transport system, ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c33760 putative glycine betaine transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PGA1_c12890 putative thiamine biosynthesis protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PGA1_c28310 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PGA1_c12870 putative ABC transporter permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PGA1_c12880 putative ABC transporter permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PGA1_c12860 putative taurine import ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PGA1_c28320 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PGA1_c07440 ABC transporter, ATP binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c13180 ABC transporter, ATP binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c16680 sugar ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c27970 smoK; ATP-binding transport protein SmoK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_78p00190 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgbC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c19470 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c27320 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c30800 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c27930 putative sugar ABC transporter, periplasmic binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PGA1_c27940 ABC transporter permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PGA1_c27950 ABC transporter permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PGA1_c07860 aglE; alpha-glucosides-binding periplasmic protein AglE K10232 aglE; alpha-glucoside transport system substrate-binding protein
D PGA1_c07870 aglF; alpha-glucoside transport system permease protein AglF K10233 aglF; alpha-glucoside transport system permease protein
D PGA1_c07880 aglG; alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein
D PGA1_c07900 aglK; alpha-glucoside transport ATP-binding protein AglK K10235 aglK; alpha-glucoside transport system ATP-binding protein
D PGA1_78p00160 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PGA1_c19500 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PGA1_78p00170 ugpA; putative sn-glycerol-3-phosphate transport system permease protein UgpA K17316 gtsB; glucose/mannose transport system permease protein
D PGA1_c19490 ABC transporter, inner-membrane protein K17316 gtsB; glucose/mannose transport system permease protein
D PGA1_78p00180 ugpE; putative sn-glycerol-3-phosphate transport system permease protein UgpE K17317 gtsC; glucose/mannose transport system permease protein
D PGA1_c19480 ABC transporter, inner-membrane protein K17317 gtsC; glucose/mannose transport system permease protein
D PGA1_262p00430 xylF; D-xylose-binding periplasmic protein XylF K10543 xylF; D-xylose transport system substrate-binding protein
D PGA1_262p00440 xylH; xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D PGA1_262p00450 sugar ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D PGA1_c28060 putative sugar transport system, periplasmic protein K10552 frcB; fructose transport system substrate-binding protein
D PGA1_c28050 putative sugar transport system, permease protein K10553 frcC; fructose transport system permease protein
D PGA1_c28040 ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D PGA1_c23100 putative D-ribose-binding periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D PGA1_c23070 putative ribose transport system permease protein K10440 rbsC; ribose transport system permease protein
D PGA1_c23080 rbsC; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D PGA1_c23060 rbsA2; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PGA1_c05230 ABC transporter, extracellular solute-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D PGA1_c05200 putative ABC transporter, inner membrane component K17322 glpP; glycerol transport system permease protein
D PGA1_c05190 ABC transporter, inner membrane component K17323 glpQ; glycerol transport system permease protein
D PGA1_c05220 ugpC3; putative sn-glycerol-3-phosphate import ATP-binding protein UgpC K17324 glpS; glycerol transport system ATP-binding protein
D PGA1_c05210 ugpC2; sn-glycerol-3-phosphate import ATP-binding protein UgbC K17325 glpT; glycerol transport system ATP-binding protein
D PGA1_c02710 sn-glycerol-3-phosphate-binding periplasmic protein ugpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PGA1_c02720 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PGA1_c02730 ugpE; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PGA1_c02740 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgbC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PGA1_c13210 extracellular solute-binding protein K10227 smoE; polyol transport system substrate-binding protein
D PGA1_c13200 ABC transporter permease protein K10228 smoF; polyol transport system permease protein
D PGA1_c13190 ABC transporter permease protein K10229 smoG; polyol transport system permease protein
D PGA1_c03970 putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PGA1_c26900 putative lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PGA1_c28170 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PGA1_c03950 putative permease protein K23535 nupB; general nucleoside transport system permease protein
D PGA1_c26920 ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D PGA1_c28140 ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D PGA1_c03940 putative permease protein K23536 nupC; general nucleoside transport system permease protein
D PGA1_c26930 ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D PGA1_c28160 ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D PGA1_c03960 rbsA1; ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D PGA1_c26910 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PGA1_c28130 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PGA1_c12570 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PGA1_c10870 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PGA1_c10860 putative ABC transporter, ATP binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PGA1_c29370 putative toluene tolerance protein, Ttg2 family K07323 mlaC; phospholipid transport system substrate-binding protein
D PGA1_c07420 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PGA1_c16710 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PGA1_c23110 putative sugar ABC transporter, extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PGA1_c27270 putative extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PGA1_c27330 putative extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PGA1_c30830 putative ABC transporter extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PGA1_c07410 binding protein dependent transport system permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D PGA1_c16700 binding protein-dependent transport system, inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D PGA1_c27340 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PGA1_c30810 putative ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PGA1_c07400 binding protein dependent transport system permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PGA1_c16690 binding protein-dependent transport system, inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PGA1_c27350 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PGA1_c30820 putative ABC transporter permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PGA1_c07300 hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PGA1_c07310 binding protein dependent transport system permease K02057 ABC.SS.P; simple sugar transport system permease protein
D PGA1_c07320 sugar ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PGA1_c15790 putative phosphate transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PGA1_c34560 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein
D PGA1_c15770 pstC; putative phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PGA1_c15760 pstA; putative phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PGA1_c15750 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PGA1_c04190 phoD; phosphate uptake ABC transporter periplasmic solute-binding protein PhoD K02044 phnD; phosphonate transport system substrate-binding protein
D PGA1_c04200 phoE; phosphate uptake ABC transporter permease protein PhoE K02042 phnE; phosphonate transport system permease protein
D PGA1_c04210 phoT; phosphate uptake ABC transporter permease protein PhoT K02042 phnE; phosphonate transport system permease protein
D PGA1_c04180 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PGA1_c01980 bztA; glutamate/glutamine/aspartate/asparagine-binding protein BztA K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PGA1_c01990 bztB; glutamate/glutamine/aspartate/asparagine transport system permease protein BztB K09970 aapQ; general L-amino acid transport system permease protein
D PGA1_c02000 bztC; glutamate/glutamine/aspartate/asparagine transport system permease protein BztC K09971 aapM; general L-amino acid transport system permease protein
D PGA1_c02010 bztD; glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PGA1_c02640 putative amino acid binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c12670 conserved hypothetical protein, associated with transport K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c15890 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c16560 extracellular ligand binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c31410 putative receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c32570 putative branched-chain amino acid transport system K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PGA1_c02590 livH; putative high-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c12660 putative high-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c15940 putative branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c16550 putative branched-chain amino acid transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c31440 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c32610 high-affinity branched-chain amino acid transport permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PGA1_c02600 livM; putative high-affinity branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c15950 putative branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c16540 putative branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c31450 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c32580 high-affinity branched-chain amino acid transport permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PGA1_c02610 livG; putative high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c12640 putative high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c15910 putative branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c16530 putative branched-chain amino acid transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c31420 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c32620 high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PGA1_c02620 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c12630 putative high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c15920 putative branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c16520 putative branched-chain amino acid transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c31430 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_c32560 high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PGA1_65p00110 putative amino-acid ABC transporter, periplasmic solute-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D PGA1_65p00120 putative amino-acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D PGA1_65p00130 putative amino-acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D PGA1_262p02360 putative histidine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PGA1_c00090 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PGA1_c00100 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PGA1_c11570 putative nopaline-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PGA1_c26610 amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PGA1_c36390 putative ABC transporter extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PGA1_262p02370 hisQ; putative histidine transport system permease protein HisQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D PGA1_262p02380 hisM; putative histidine transport system permease protein HisM K02029 ABC.PA.P; polar amino acid transport system permease protein
D PGA1_c11560 putative arginine transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PGA1_c26600 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PGA1_262p02350 hisP; histidine transport ATP-binding protein HisP K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PGA1_c11580 occP; octopine permease ATP-binding protein P K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PGA1_262p00300 ABC transporter, extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p00870 ABC transporter, extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p01040 dppA; periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p01700 putative ABC transporter, solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c04440 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c06780 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c10120 gsiB1; putative glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c14180 putative transport system, extracellular solute binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c15010 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c16270 putative periplasmic dipeptide transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c22110 gsiB2; putative glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c25450 putative transport system, extracellular solute binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c28450 dppA; putative periplasmic dipeptide transport protein DppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c32060 gsiB3; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c33820 ABC transporter extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_c34660 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PGA1_262p00310 gsiC; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p00880 ABC transporter, integral inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p01030 dppB; dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p01710 putative glutathione transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c04430 putative peptide permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c06790 putative peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c10110 gsiC1; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c14170 putative binding-protein-dependent transport system inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c16280 putative dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c22120 gsiC2; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c28430 putative D,D-dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_c32080 gsiC3; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PGA1_262p00320 ABC transporter, inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p00890 ABC transporter, integral inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p01020 dppC; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p01720 putative glutathione transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c04420 gsiD1; putative glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c06800 dppC1; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c10100 gsiD2; putative glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c14160 putative glutathione transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c16290 dppC2; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c22130 gsiD3; putative glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c28420 putative D,D-dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_c32090 gsiD4; glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PGA1_262p00330 oligopeptide ABC transporter, ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p00900 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p01010 dppD; dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p01730 putative glutathione import ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c04450 gsiA1; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c06810 dppD1; putative dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c10130 gsiA2; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c14150 gsiA3; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c16300 dppD2; dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c22140 gsiA4; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c28410 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_c32100 gsiA5; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PGA1_262p00340 oligopeptide ABC transporter, ATP binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_262p01000 dppF; dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_262p01740 putative peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_c06820 dppF; dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_c16310 oligopeptide/dipeptide transport ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PGA1_c30180 ABC transporter extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PGA1_c30170 ABC transporter permease protein K13894 yejB; microcin C transport system permease protein
D PGA1_c30160 ABC transporter permease protein K13895 yejE; microcin C transport system permease protein
D PGA1_c30150 oligopeptide/dipeptide ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PGA1_c25890 putative iron ABC transport system, periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D PGA1_c25900 putative iron ABC transport system, permease protein K23186 fepD; iron-siderophore transport system permease protein
D PGA1_c25910 fepG; ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D PGA1_c25920 fepC; ferric enterobactin transport ATP-binding protein FepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D PGA1_78p00390 periplasmic binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PGA1_78p00370 ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D PGA1_78p00380 ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D PGA1_78p00360 putative ferrichrome transport ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PGA1_c26870 putative periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PGA1_c26880 putative iron transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PGA1_c26860 putative iron transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PGA1_262p02220 ABC transporter, periplasmic solute-binding protein K09815 znuA; zinc transport system substrate-binding protein
D PGA1_c20820 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D PGA1_262p02250 znuB; high-affinity zinc uptake system membrane protein ZnuB K09816 znuB; zinc transport system permease protein
D PGA1_262p02240 znuC; zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PGA1_c32780 mntA; manganese-binding lipoprotein MntA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PGA1_c32760 mntC; manganese transport system membrane protein MntC K11708 troC; manganese/zinc/iron transport system permease protein
D PGA1_c32750 mntD; manganese transport system membrane protein MntD K11709 troD; manganese/zinc/iron transport system permease protein
D PGA1_c32770 mntB; manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PGA1_65p00420 putative ABC type transporter K09688 kpsM; capsular polysaccharide transport system permease protein
D PGA1_65p00410 putative olysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PGA1_c24320 putative capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PGA1_65p00400 ABC transporter, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PGA1_c24310 putative capsular polysaccharide transport system, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PGA1_c19810 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D PGA1_c19820 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D PGA1_c35980 lptB; lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PGA1_c21410 lolC; lipoprotein-releasing system transmembrane protein LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D PGA1_c21400 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PGA1_c18865 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D PGA1_c18870 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D PGA1_c18880 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D PGA1_c18890 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PGA1_c03510 protein insertion permease FtsX-like protein K09811 ftsX; cell division transport system permease protein
D PGA1_c03500 ftsE; putative cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PGA1_c02840 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PGA1_c24250 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PGA1_c02830 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PGA1_c31750 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PGA1_262p01610 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PGA1_c13600 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PGA1_c13610 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PGA1_c16140 putative lipoprotein transport protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PGA1_c26390 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PGA1_262p01600 putative ABC transporter, ATP binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PGA1_c13590 ABC transporter, ATP binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PGA1_c16130 putative lipoprotein-releasing system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PGA1_c26380 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PGA1_c15390 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PGA1_c21310 norM; multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D PGA1_262p00520 putative multi antimicrobial extrusion protein K26937 dinF; MATE family, multidrug efflux pump
D PGA1_c12130 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D PGA1_c20720 transporter, MFS family K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D PGA1_c13030 putative tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PGA1_c14930 putative MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PGA1_c21620 putative bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PGA1_c17380 MFS type transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PGA1_c31930 putative transporter, MFS family K06902 UMF1; MFS transporter, UMF1 family
D PGA1_c23500 ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PGA1_c01200 putative phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr
D PGA1_c01190 putative PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PGA1_c35960 ptsN; nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PGA1_c07550 ion channel domain-containing protein K10716 kch; voltage-gated potassium channel
D PGA1_c14730 amtB; ammonia channel K03320 amt; ammonium transporter, Amt family
D PGA1_c29410 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PGA1_c07460 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c12050 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c13330 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c23760 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c26690 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c32680 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c33430 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c36120 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PGA1_c03730 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D PGA1_c07090 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PGA1_c13960 putative mechanosensitive ion channel protein K05802 mscK; potassium-dependent mechanosensitive channel
D PGA1_c02340 putative mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D PGA1_c07080 mscS; small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D PGA1_c26970 mechanosensitive ion channel-like protein K03442 mscS; small conductance mechanosensitive channel
D PGA1_c29220 putative small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D PGA1_c04400 mechanosensitive ion channel-like protein K22044 ybiO; moderate conductance mechanosensitive channel
D PGA1_c21830 mgtE; magnesium transporter MgtE K06213 mgtE; magnesium transporter
D PGA1_c35680 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D PGA1_c35560 chemotaxis protein MotB-like protein K02557 motB; chemotaxis protein MotB
D PGA1_c25940 putative integral membrane protein K03561 exbB; biopolymer transport protein ExbB
D PGA1_c25950 putative biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D PGA1_c25960 putative biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D PGA1_c05900 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D PGA1_c05910 exbD; putative biopolymer transport protein ExbD K03560 tolR; biopolymer transport protein TolR
D PGA1_c01940 crcB-like protein K06199 crcB; fluoride exporter
D PGA1_c23620 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D PGA1_c14050 inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PGA1_c33380 opmA; porin K08720 ompU; outer membrane protein OmpU
D PGA1_c16480 putative outer membrane protein K16079 omp31; outer membrane immunogenic protein
D PGA1_c16490 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D PGA1_c02930 OmpA domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PGA1_c29170 outer memrane protein OmpA-like protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PGA1_c14580 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D PGA1_78p00400 tonB dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PGA1_c25980 fhuA; ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D PGA1_c02450 putative outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D PGA1_262p00580 putative polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D PGA1_65p00200 putative polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D PGA1_c08890 putative capsule polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D PGA1_c14280 omp; outer membrane protein Omp K07277 SAM50; outer membrane protein insertion porin family
D PGA1_c19000 putative quinoprotein K17713 bamB; outer membrane protein assembly factor BamB
D PGA1_c09710 putative outer membrane assembly lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D PGA1_c05440 surface antigen-like protein K07278 tamA; translocation and assembly module TamA
D PGA1_c05430 hypothetical protein K09800 tamB; translocation and assembly module TamB
D PGA1_c35990 lptA; OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA
D PGA1_c36000 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D PGA1_c19830 putative organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D PGA1_c33410 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D PGA1_78p00530 putative outer membrane protein K07274 mipA; MipA family protein
D PGA1_c04760 magnesium and cobalt efflux protein corC-like protein K06189 corC; hemolysin (HlyC) family protein
D PGA1_78p00510 mdtB; multidrug transporter MdtB K18989 vexF; multidrug efflux pump
D PGA1_c19040 mdtC; multidrug resistance protein MdtC K18989 vexF; multidrug efflux pump
D PGA1_c15310 emrE; multidrug transporter EmrE K03297 emrE; small multidrug resistance pump
D PGA1_c29070 pecM; integral membrane protein PecM K15269 pecM; probable blue pigment (indigoidine) exporter
D PGA1_c33100 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D PGA1_262p01440 BCCT transporter K05020 opuD; glycine betaine transporter
D PGA1_c21690 transporter, BCCT family K05020 opuD; glycine betaine transporter
D PGA1_c02860 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D PGA1_c06490 gltS; sodium/glutamate symport carrier protein GltS K03312 gltS; glutamate:Na+ symporter, ESS family
D PGA1_c07580 kefC; glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PGA1_c14840 trkH; putative trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PGA1_c23520 trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PGA1_c14830 trkA; trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PGA1_c29480 putative inner membrane transport protein K05782 benE; benzoate membrane transport protein
D PGA1_c09730 putative voltage-gated CIC-type chloride channel K03281 clcA; chloride channel protein, CIC family
D PGA1_c13550 putative chromate transporter K07240 chrA; chromate transporter
D PGA1_c06390 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PGA1_c19700 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PGA1_c07780 dctP1; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c12960 putative extracellular solute-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c13140 putative TRAP transporter extracellular solute binding protein, family 7 K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c20180 dctP2; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c20680 dctP3; C4-dicarboxylate-binding periplasmic protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c27170 dctP4; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c33920 dctP5; TRAP transporter, subunit DctP K11688 dctP; TRAP-type transport system periplasmic protein
D PGA1_c07770 dctQ1; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c12970 dctQ2; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c13120 dctQ3; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c20670 dctQ4; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c27150 dctQ5; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c33910 dctQ6; TRAP transporter, subunit DctQ K11689 dctQ; TRAP-type transport system small permease protein
D PGA1_c07760 dctM1; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c12980 dctM2; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c13130 dctM3; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c20660 dctM5; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c27160 dctM6; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c33900 dctM7; TRAP transporter, subunit DctM K11690 dctM; TRAP-type transport system large permease protein
D PGA1_c31330 putative Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D PGA1_c12270 monovalent cation/proton antiporter subunit A/B K05559 phaA; multicomponent K+:H+ antiporter subunit A
D PGA1_c12260 monovalent cation/proton antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D PGA1_c12250 monovalent cation/proton antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D PGA1_c12240 monovalent cation/proton antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D PGA1_c12230 monovalent cation/proton antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D PGA1_c12220 monovalent cation/proton antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D PGA1_c26760 mviN; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PGA1_c07970 putative membrane transport protein K13936 mdcF; malonate transporter and related proteins
D PGA1_c31590 putative membrane transport protein K13936 mdcF; malonate transporter and related proteins
D PGA1_c21730 putative arginine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PGA1_c33150 putative LysE-type translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D PGA1_c00190 lysE type translocator-like protein K05835 rhtC; threonine efflux protein
D PGA1_c16820 putative threonine efflux protein K05835 rhtC; threonine efflux protein
D PGA1_262p00170 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D PGA1_c03220 branched-chain amino acid transport protein azlC-like protein K26605 azlC; branched chain amino acid efflux pump
D PGA1_262p00160 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D PGA1_c03210 branched-chain amino acid transport protein azlD-like protein K26606 azlD; branched chain amino acid efflux pump
D PGA1_c07960 putative integral membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PGA1_c32260 putative integral membrane protein K07793 tctA; putative tricarboxylic transport membrane protein
D PGA1_c07950 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PGA1_c32270 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D PGA1_c07940 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PGA1_c32280 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D PGA1_c31960 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D PGA1_c09600 ftsw; cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PGA1_c25970 tonB-like protein K03832 tonB; periplasmic protein TonB
D PGA1_c05940 putative peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D PGA1_c06130 outer membrane protein OmpA-like protein K03640 pal; peptidoglycan-associated lipoprotein
D PGA1_c18970 hypothetical protein K03646 tolA; colicin import membrane protein
D PGA1_c05930 tolB; putative protein TolB K03641 tolB; TolB protein
D PGA1_c12400 soxV; ccdA-like protein SoxV K06196 ccdA; cytochrome c-type biogenesis protein
D PGA1_c13470 cytochrome C biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D PGA1_65p00020 putative type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D PGA1_c29340 putative HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D PGA1_c02430 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D PGA1_78p00520 putative secretion protein, HylD family K18990 vexE; membrane fusion protein, multidrug efflux system
D PGA1_c19030 putative efflux transporter, RND family, MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D PGA1_262p00090 putative exopolysaccharide biosynthesis transport protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PGA1_c05270 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PGA1_c05280 hypothetical protein K25590 epsF; protein tyrosine kinase modulator
D PGA1_c24060 hypothetical protein K16348 ecnB; entericidin B
D PGA1_c17010 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PGA1_262p00680 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PGA1_c05470 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:pga02044]
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D PGA1_65p00030 putative type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PGA1_c29350 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PGA1_65p00020 putative type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system
D PGA1_c29340 putative HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D PGA1_c02440 putative ATP-binding/permease fusion ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PGA1_c02430 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D PGA1_c02450 putative outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D PGA1_c06060 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PGA1_c06150 Flp pilus assembly protein CpaB-like protein K02279 cpaB; pilus assembly protein CpaB
D PGA1_c06140 putative bacterial type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D PGA1_c06120 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PGA1_c06110 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PGA1_c06100 type II secretion system protein F-like protein K12510 tadB; tight adherence protein B
D PGA1_c06090 type II secretion system protein F-like protein K12511 tadC; tight adherence protein C
D PGA1_c08710 hypothetical protein K12513 tadE; tight adherence protein E
D PGA1_c06160 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PGA1_c06170 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PGA1_c31910 hypothetical protein K02221 yggT; YggT family protein
D PGA1_c35710 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PGA1_c35730 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PGA1_c35640 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PGA1_c35840 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PGA1_c35620 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PGA1_c35610 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PGA1_c35800 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PGA1_c35720 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PGA1_c22830 virB2; putative type IV secretion system protein VirB2 K03197 virB2; type IV secretion system protein VirB2
D PGA1_c22840 putative type IV secretory pathway virB3 protein K03198 virB3; type IV secretion system protein VirB3
D PGA1_c22850 virB; type IV secretion system protein VirB K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D PGA1_c22880 hypothetical protein K03200 virB5; type IV secretion system protein VirB5
D PGA1_c22940 virB6; putative type IV secretion system protein VirB6 K03201 virB6; type IV secretion system protein VirB6
D PGA1_c22890 virB8; putative type IV secretion system protein VirB8 K03203 virB8; type IV secretion system protein VirB8
D PGA1_c22900 virB9; putative type IV secretion system protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D PGA1_c22910 virB10; putative type IV secretion system protein VirB10 K03195 virB10; type IV secretion system protein VirB10
D PGA1_c22920 virB11; putative type IV secretion system protein VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D PGA1_c22980 virD2; putative protein VirD2 K18434 virD2; type IV secretion system T-DNA border endonuclease VirD2
D PGA1_c22970 virD4; putative protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PGA1_c34580 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PGA1_c35180 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D PGA1_c18920 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D PGA1_c01360 putative preprotein translocase, secE subunit K03073 secE; preprotein translocase subunit SecE
D PGA1_c18910 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D PGA1_c23890 preprotein translocase secG-like protein K03075 secG; preprotein translocase subunit SecG
D PGA1_c01860 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D PGA1_c00630 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PGA1_c23570 putative cell division protein K03110 ftsY; fused signal recognition particle receptor
D PGA1_c18930 preprotein translocase YajC-like protein K03210 yajC; preprotein translocase subunit YajC
D PGA1_c02090 oxaA; inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PGA1_c10700 tatA; putative independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PGA1_c10710 tatB; putative sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D PGA1_c10720 tatC; putative sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pga02042]
D PGA1_c14050 inner membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:pga02022]
D PGA1_c15800 phosphate regulon sensor protein phoR-like protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PGA1_c15730 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PGA1_c28470 putative response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PGA1_c13060 sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PGA1_c34130 petR; protein PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PGA1_c07920 signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D PGA1_c07930 two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D PGA1_c01160 chvG; sensor protein ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D PGA1_c01150 chvI; transcriptional regulatory protein ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D PGA1_c13010 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PGA1_c32650 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PGA1_c19640 transcriptional regulator, containing response regulator domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PGA1_c20200 two-component signal transduction system, response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PGA1_78p00580 two-component system sensor-like protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PGA1_c20190 two-component signal transduction system, histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PGA1_c14780 ntrB; nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PGA1_c14790 ntrC; nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PGA1_c14800 ntrY; nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D PGA1_c14810 ntrX; nitrogen assimilation regulatory protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D PGA1_c13430 dctB1; C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PGA1_c20700 dctB2; C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D PGA1_c20690 dctD2; C4-dicarboxylate transport transcriptional regulatory protein DctD K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D PGA1_c27600 putative signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PGA1_262p02120 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PGA1_262p02090 response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02130 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02160 putative chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PGA1_c16580 CheR and CheB-like domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PGA1_c08540 pleD; response regulator PleD K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D PGA1_c15240 two-component system histidine kinase / response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D PGA1_c14360 ctrA; cell cycle response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D PGA1_c35370 regB; sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D PGA1_c35390 regA; photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA
D PGA1_c07670 two component regulatory sytem K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PGA1_c19620 two-component system hybrid kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PGA1_c34890 putative histidine-containing phosphotransfer protein K20976 hptB; histidine phosphotransfer protein HptB
D PGA1_c27060 putative signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pga02035]
D PGA1_262p02120 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PGA1_262p02110 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PGA1_262p02170 cheD2; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PGA1_262p02100 methyltransferase, cheR type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PGA1_262p02160 putative chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PGA1_c16580 CheR and CheB-like domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PGA1_262p02090 response regulator receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p02130 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PGA1_262p00360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_262p02150 cheD1; methyl-accepting chemotaxis protein I K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c05150 mcpA1; chemoreceptor McpA K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c09020 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c11800 mcpA2; chemoreceptor McpA K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c14110 putative chemoreceptor K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c18180 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c24960 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c25780 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c27460 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PGA1_c35840 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PGA1_c35610 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PGA1_c35800 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PGA1_c35720 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PGA1_c35710 flhA; flagellar biosynthetic protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PGA1_c35730 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PGA1_c18800 fliG; putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PGA1_c12720 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D PGA1_c35620 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PGA1_c35640 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PGA1_c35600 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PGA1_c35770 flgA; putative flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PGA1_c35760 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PGA1_c35650 fliL1; putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PGA1_c35750 fliL2; putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D PGA1_c35810 fliE; putative flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PGA1_c35830 flgB; putative flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PGA1_c35820 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PGA1_c35910 putative flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D PGA1_c35790 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PGA1_c35780 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PGA1_c35890 putative rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D PGA1_c35570 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PGA1_c35580 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PGA1_c35590 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D PGA1_c35870 putative flagellin K02406 fliC; flagellin
D PGA1_c35680 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D PGA1_c35560 chemotaxis protein MotB-like protein K02557 motB; chemotaxis protein MotB
D PGA1_c35860 flaF; flagellar protein FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D PGA1_c35850 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D PGA1_c06160 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PGA1_c06170 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D PGA1_c06060 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PGA1_c06150 Flp pilus assembly protein CpaB-like protein K02279 cpaB; pilus assembly protein CpaB
D PGA1_c06140 putative bacterial type II/III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D PGA1_c06120 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PGA1_c06110 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pga04812]
D PGA1_c26500 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PGA1_c09690 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PGA1_c09680 ftsA; celldivision protein FtsA K03590 ftsA; cell division protein FtsA
D PGA1_65p00470 putative plasmid partition protein A K03496 parA; chromosome partitioning protein
D PGA1_78p00610 putative plasmid partition protein A K03496 parA; chromosome partitioning protein
D PGA1_c00490 hypothetical protein K03496 parA; chromosome partitioning protein
D PGA1_c35080 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PGA1_262p00020 plamid partition protein-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_65p00460 putative plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_78p00600 putative parB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c19310 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PGA1_c35070 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pga04147]
D PGA1_c23910 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PGA1_c11420 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PGA1_c05510 gapA; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c17250 gapB; glyceraldehyde-3-phosphate dehydrogenase 2 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c27490 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PGA1_c17530 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PGA1_c06970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PGA1_262p01450 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_262p01800 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c16260 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c19430 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c24920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PGA1_c34530 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PGA1_c27980 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PGA1_c15220 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PGA1_c01320 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D PGA1_c01520 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D PGA1_c06720 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PGA1_c02630 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c04160 putative crotonobetaine/carnitine-CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c25300 fadD2; long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c32630 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PGA1_c07160 hypothetical protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D PGA1_c03400 phaA; acetyl-CoA acetyltransferase PhaA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c12030 fadA2; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c33180 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c34350 phbA; acetyl-CoA acetyltransferase PhbA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PGA1_c35420 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PGA1_c01870 adk1; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D PGA1_c12940 adk2; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D PGA1_c06370 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PGA1_c03450 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PGA1_c34920 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PGA1_262p02310 amidinotransferase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D PGA1_c21340 putative L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c31390 putative aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D PGA1_c12850 dht; D-hydantoinase/dihydropyrimidinase Dht K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D PGA1_c00430 fah; fumarylacetoacetase Fah K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PGA1_c32030 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PGA1_c05550 glutamine synthase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11520 puuA1; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c11540 puuA2; gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c18720 glnA; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c23340 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c27180 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PGA1_c14900 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PGA1_c07610 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PGA1_c29290 putative pterin 4 alpha carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PGA1_c36140 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PGA1_c32860 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PGA1_78p00260 lpdA; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c03550 lpd2; dihydrolipoyl dehydrogenase 2 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c17390 lpdA2; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c23190 lpdA3; dihydrolipoyl dehydrogenase LpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PGA1_c01240 etfA; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D PGA1_c08740 gluD; glutamate dehydrogenase GluD K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PGA1_c15160 zwf1; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PGA1_c27990 zwf2; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PGA1_c20650 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pga02048]
D PGA1_c30690 putative type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PGA1_c30700 putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PGA1_c30710 putative type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PGA1_c33570 babI; modification methylase BabI K13581 ccrM; modification methylase [EC:2.1.1.72]
D PGA1_c09390 naeIM; modification methylase NaeI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c22570 cytosine-specific DNA methylase domain-containing protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PGA1_c23220 hipA; protein HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PGA1_c23240 protein hipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PGA1_c30890 putative HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PGA1_262p00470 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D PGA1_262p00480 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D PGA1_c30660 putative addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D PGA1_c09690 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PGA1_c26500 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PGA1_c01300 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PGA1_c21350 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PGA1_c16960 gltX1; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c26430 gltX2; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PGA1_c21230 hypothetical protein K09159 cptB; antitoxin CptB
D PGA1_c15360 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pga04090]
C 01504 Antimicrobial resistance genes [BR:pga01504]
D PGA1_c13030 putative tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PGA1_c06400 putative antibiotic acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D PGA1_c33970 putative chloramphenicol phosphotransferase-like protein K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
D PGA1_c05170 penicillinase repressor blaI/mecI-like protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PGA1_c09800 bla; beta-lactamase Bla K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PGA1_c13760 dltA1; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13780 dltA2; D-alanine--poly(phosphoribitol) ligase subunit K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PGA1_c13380 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PGA1_c02530 hmrR; HTH-type transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PGA1_c24020 putative outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pga00537]
D PGA1_262p01450 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_262p01800 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c16260 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PGA1_c19430 putative membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pga03100]
D PGA1_c00120 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c25690 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c28640 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c30590 trnA4; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_c32360 trnA5; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PGA1_262p01070 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c02200 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c16030 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c25830 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c33860 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PGA1_c13040 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PGA1_c16650 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PGA1_c20370 trnD1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PGA1_c20380 trnD2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PGA1_c20390 trnD3; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PGA1_c22650 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PGA1_c02680 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PGA1_c08610 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PGA1_c08620 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PGA1_c09360 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c09370 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c09400 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c15190 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c22590 trnG5; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PGA1_c08980 trnH; tRNA-His K14226 tRNA-His; tRNA His
D PGA1_c00130 trnI1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c25680 trnI2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c28630 trnI3; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c32350 trnI4; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PGA1_c06760 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c11780 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c16330 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c18690 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c36030 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c36040 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PGA1_c33940 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PGA1_c00160 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c13230 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c25650 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c28600 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c30300 trnM5; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c32320 trnM6; tRNA-Met K14230 tRNA-Met; tRNA Met
D PGA1_c31085 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PGA1_c11210 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PGA1_c16770 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PGA1_c29850 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PGA1_c05050 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c08040 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c13980 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c15450 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PGA1_c07660 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PGA1_c31240 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PGA1_c35530 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PGA1_c01340 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PGA1_c20410 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D PGA1_c20480 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D PGA1_c32490 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D PGA1_c00110 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c25700 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c28650 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c32370 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PGA1_c00140 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c25670 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c28620 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c32340 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PGA1_c00150 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c25660 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c28610 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PGA1_c32330 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PGA1_c08420 putative 3-hydroxyacyl-CoA dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33]
D PGA1_c07750 hisD1; histidinol dehydrogenase HisD K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D PGA1_c25490 hisD2; histidinol dehydrogenase HisD K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D PGA1_c27370 hisD3; histidinol dehydrogenase HisD K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D PGA1_c13100 aldo / keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432]
D PGA1_c23140 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D PGA1_c23150 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D PGA1_c15880 yliI; soluble aldose sugar dehydrogenase YliI K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PGA1_c21070 betB1; betaine aldehyde dehydrogenase BetB K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D PGA1_c16210 iron-sulfur cluster binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D PGA1_c20880 molybdenum hydroxylase family protein, small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D PGA1_c20860 molybdenum hydroxylase family protein, medium subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D PGA1_c11660 molybdenum-containing hydroxylase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D PGA1_c20870 molybdenum hydroxylase family protein, large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D PGA1_c04490 iorAB; indolepyruvate oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D PGA1_c17080 pyruvate ferredoxin/flavodoxin oxidoreductase-like protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D PGA1_c25330 fadH1; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PGA1_c29100 fadH2; 2,4-dienoyl-CoA reductase FadH K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PGA1_c30440 putative NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D PGA1_c09950 iorA; isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D PGA1_c09930 iorB; isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D PGA1_c25710 stcD; putative N-methylproline demethylase StcD K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]
D PGA1_c03320 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D PGA1_c02670 quinone oxidoreductase-like protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PGA1_c15610 alcohol dehydrogenase, zinc binding protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PGA1_c21880 putative alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PGA1_c34290 msrA1; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PGA1_c34970 msrA2; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PGA1_c34280 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PGA1_c24280 yghU; putative GST-like protein YghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PGA1_262p01130 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PGA1_c00840 glutathione transferase-like protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PGA1_c32400 putative molybdopterin-binding oxidoreductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PGA1_262p00400 putative cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PGA1_c07140 mauG; putative methylamine utilization protein MauG K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PGA1_c13150 di-heme cytochrome c peroxidase-like protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PGA1_c17440 bcp; putative peroxiredoxin Bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PGA1_c14660 putative peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PGA1_c33020 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PGA1_c34100 ohr; organic hydroperoxide resistance protein Ohr K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PGA1_c08680 pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PGA1_c27210 metal dependent phosphohydrolases-like protein K24290 tmpB; [1-hydroxy-2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.13.11.90]
D PGA1_c27220 putative gamma-butyrobetaine dioxygenase K24291 tmpA; [2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.14.11.72]
D PGA1_78p00100 hmp; flavohemoprotein Hmp K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PGA1_c05010 putative dioxygenase K24003 stc2; stachydrine N-demethylase [EC:1.14.13.247]
D PGA1_c13090 ssuD; alkanesulfonate monooxygenase SsuD K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181]
D PGA1_c21080 putative flavin monooxygenase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]
D PGA1_c25930 putative siderophore interacting protein K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9]
D PGA1_c20790 fpr; ferredoxin--NADP reductase Fpr K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PGA1_c12140 putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PGA1_c14990 arsC; putative protein ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PGA1_c10760 pcm; protein-L-isoaspartate O-methyltransferase Pcm K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PGA1_c24030 putative protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PGA1_c13920 cfa; cyclopropane-fatty-acyl-phospholipid synthase Cfa K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PGA1_c27540 putative cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PGA1_c05240 hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D PGA1_c11300 putative nodulation protein L K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PGA1_c24640 putative 3-oxoacyl-[acyl-carrier-protein] synthase 3 K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D PGA1_c04770 int; apolipoprotein N-acyltransferase Int K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PGA1_c15560 acyltransferase domain-containing protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D PGA1_c08400 hypothetical protein K27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317]
D PGA1_c24910 hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PGA1_c25820 putative acetyltransferase, GNAT family K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D PGA1_c21760 putative N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D PGA1_c15980 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase FabF K14660 nodE; nodulation protein E [EC:2.3.1.-]
D PGA1_c21490 putative N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PGA1_c12590 aat; leucyl/phenylalanyl-tRNA--protein transferase Aat K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PGA1_c20140 putative arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D PGA1_c11280 hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D PGA1_c15550 hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D PGA1_c24730 lgt; prolipoprotein diacylglyceryl transferase Lgt K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PGA1_c20010 glnE; glutamate-ammonia-ligase adenylyltransferase GlnE K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PGA1_c11360 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PGA1_c22960 hypothetical protein K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D PGA1_262p02280 hypothetical protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D PGA1_c15210 putative CoA-transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D PGA1_c25040 alpha/beta hydrolase domain-containing protein K19311 lipV; lipase [EC:3.1.1.-]
D PGA1_262p00950 tdaD; thioesterase superfamily protein TdaD K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PGA1_c05890 thioesterase domain-containing protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PGA1_c15180 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PGA1_c02030 phosphoglycerate mutase-like protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PGA1_c21680 betC; choline-sulfatase BetC K01133 betC; choline-sulfatase [EC:3.1.6.6]
D PGA1_c33810 putative choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D PGA1_c07990 putative hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PGA1_c11820 putative esterase K01175 ybfF; esterase [EC:3.1.-.-]
D PGA1_c30030 putative D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PGA1_c00870 def1; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PGA1_c00880 def2; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PGA1_c00890 def3; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PGA1_c34700 putative carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D PGA1_c21100 hypothetical protein K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-]
D PGA1_c00300 guanidinobutyrase K18459 gpuA; guanidinopropionase [EC:3.5.3.17]
D PGA1_c00310 guanidinobutyrase K18459 gpuA; guanidinopropionase [EC:3.5.3.17]
D PGA1_c21850 putative hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D PGA1_c31820 putative ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PGA1_c18700 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PGA1_c34200 caiD; carnitinyl-CoA dehydratase CaiD K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D PGA1_262p00750 conserved hypothetical protein, diaminopropionate ammonia-lyase-like protein K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D PGA1_c31800 ygbM; protein YgbM K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D PGA1_c30050 ccoI; heavy metal translocating ATPase CcoI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PGA1_c29910 zntA; lead, cadmium, zinc and mercury-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PGA1_c29210 sfsA; sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D PGA1_c32070 conserved hypothetical protein, histone deacetylase-like protein K04768 acuC; acetoin utilization protein AcuC
D PGA1_c07380 ilvD; dihydroxy-acid dehydratase IlvD K22216 ilvD1; dehydratase ilvD1
C 99982 Energy metabolism
D PGA1_c03230 fdhD; putative formate dehydrogenase, subunit FdhD K02379 fdhD; FdhD protein
D PGA1_c07530 fdxA; ferredoxin FdxA K05524 fdxA; ferredoxin
D PGA1_262p01200 norD; putative protein NorD K02448 norD; nitric oxide reductase NorD protein
D PGA1_262p01210 norQ; putative protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D PGA1_c01250 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D PGA1_c05020 phenylacetic acid degradation NADH oxidoreductase K24004 stc4; stachydrine N-demethylase, reductase component
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PGA1_c24470 hypothetical protein K06203 cysZ; CysZ protein
D PGA1_c33360 putative alanine racemase K06997 yggS; PLP dependent protein
D PGA1_c28780 acetyltransferase domain-containing protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D PGA1_262p00070 hypothetical protein K16567 exoQ; exopolysaccharide production protein ExoQ
D PGA1_c33010 glycosyltransferase-like protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D PGA1_c08180 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D PGA1_c35520 HemY-like protein K02498 hemY; HemY protein
D PGA1_c36470 ubiB; putative ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D PGA1_c03250 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D PGA1_c30360 rpsU1; protein RpsU K18587 COQ9; ubiquinone biosynthesis protein COQ9
D PGA1_c14720 hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D PGA1_c07020 hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase
D PGA1_c12290 hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase
D PGA1_c28990 putative NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PGA1_c21030 hypothetical protein K15977 K15977; putative oxidoreductase
D PGA1_c16420 putative phospholipase / carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PGA1_c11060 cspE; cold shock-like protein CspE K03704 cspA; cold shock protein
D PGA1_c16790 putative cold shock protein K03704 cspA; cold shock protein
D PGA1_c21060 cspA1; cold shock protein CspA K03704 cspA; cold shock protein
D PGA1_c26360 cold shock protein K03704 cspA; cold shock protein
D PGA1_c26780 cspA2; cold shock protein CspA K03704 cspA; cold shock protein
D PGA1_c09850 S1 domain-containing protein K06959 tex; protein Tex
C 99974 Translation
D PGA1_262p00510 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D PGA1_c01100 hypothetical protein K03668 hslJ; heat shock protein HslJ
D PGA1_c30000 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PGA1_c18160 tig; trigger factor Tig K03545 tig; trigger factor
D PGA1_c32390 conserved hypothetical protein, ferric reductase-like transmembrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PGA1_c29450 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PGA1_c26700 putative magnesium chelatase K07391 comM; magnesium chelatase family protein
D PGA1_c20900 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D PGA1_c28120 xdhC; xanthine dehydrogenase XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D PGA1_c34550 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PGA1_c32730 RmuC DNA recombination family protein K09760 rmuC; DNA recombination protein RmuC
D PGA1_c26720 hypothetical protein K07460 yraN; putative endonuclease
D PGA1_c06230 smf; putative protein Smf K04096 smf; DNA processing protein
D PGA1_c01930 rarA; replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PGA1_c06860 putative transposase K07483 K07483; transposase
D PGA1_c28500 putative transposase K07483 K07483; transposase
D PGA1_c00200 transposase K07486 K07486; transposase
D PGA1_c17960 transposase K07486 K07486; transposase
D PGA1_c23200 transposase K07486 K07486; transposase
D PGA1_c06850 putative transposase K07497 K07497; putative transposase
D PGA1_c28510 putative transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PGA1_c30280 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PGA1_c02350 yfdC; inner membrane protein YfdC K21990 yfdC; formate-nitrite transporter family protein
D PGA1_c27560 putative MFS-type transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PGA1_c13880 putative transporter, BCCT family K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PGA1_c24210 putative phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PGA1_78p00280 putative sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PGA1_c07110 putative sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PGA1_c25340 sodium bile acid symporter-like protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D PGA1_c23550 putative intracellular septation protein K06190 ispZ; intracellular septation protein
D PGA1_c28720 allophanate hydrolase, subunit 1 K06351 kipI; inhibitor of KinA
D PGA1_c25640 putative integrases/recombinase K06400 spoIVCA; site-specific DNA recombinase
D PGA1_c02490 sporulation protein R-like protein K06415 spoVR; stage V sporulation protein R
D PGA1_c02780 hypothetical protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D PGA1_c16160 uspF; universal stress protein F K14061 uspF; universal stress protein F
D PGA1_c26190 universal stress protein K14061 uspF; universal stress protein F
D PGA1_c15300 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D PGA1_c27500 chrR; transcriptional activator ChrR K07167 chrR; putative transcriptional regulator
D PGA1_c04740 phoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PGA1_c02470 putative serine-protein kinase, PrkA type K07180 prkA; serine protein kinase
C 99992 Structural proteins
D PGA1_c29360 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PGA1_c08900 kpsS; putative capsule polysaccharide export protein KpsS K07265 kpsS; capsular polysaccharide export protein
D PGA1_c08880 kpsC; capsule polysaccharide export protein KpsC K07266 kpsC; capsular polysaccharide export protein
D PGA1_c29960 glycosyl hydrolase-like protein K07273 acm; lysozyme
D PGA1_c10290 outer membrane protein K07275 ompW; outer membrane protein
D PGA1_c24350 hypothetical protein K07289 asmA; AsmA protein
D PGA1_c21550 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D PGA1_c17040 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PGA1_c17000 ccl; cytochrome c-type biogenesis protein Ccl K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PGA1_c19180 cycH; cytochrome c-type biogenesis protein CycH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D PGA1_c15740 phoU; phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein
D PGA1_c12310 mdoG; glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D PGA1_c04280 phnK; phosphonates transport ATP-binding protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D PGA1_c08290 putative peptidase M75 K07231 K07231; putative iron-regulated protein
D PGA1_262p01170 putative nnrS protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PGA1_c10830 colicin V production protein-like protein K03558 cvpA; membrane protein required for colicin V production
D PGA1_c17980 csaA; protein CsaA K06878 K06878; tRNA-binding protein
D PGA1_c24690 protein CsaA-like protein K06878 K06878; tRNA-binding protein
D PGA1_c05690 hypothetical protein K06886 glbN; hemoglobin
D PGA1_c15030 phospholipase-like protein K07001 K07001; NTE family protein
D PGA1_c06640 putative pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D PGA1_c30010 haloacid dehalogenase-like protein K07025 K07025; putative hydrolase of the HAD superfamily
D PGA1_c15370 sufB; protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PGA1_c15400 sufD; protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PGA1_c02370 putative ribonuclease BN K07058 K07058; membrane protein
D PGA1_c16090 putative tRNA-processing ribonuclease K07058 K07058; membrane protein
D PGA1_c35190 fxsA; putative protein FxsA K07113 fxsA; UPF0716 protein FxsA
D PGA1_c13310 cysteine desulfuration protein sufE-like protein K02426 sufE; cysteine desulfuration protein SufE
D PGA1_c32160 hypothetical protein K07146 K07146; UPF0176 protein
D PGA1_c24650 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH
D PGA1_c29900 protein slyX-like protein K03745 slyX; SlyX protein
D PGA1_c05680 hypothetical protein K08990 ycjF; putative membrane protein
D PGA1_c24040 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D PGA1_c21920 hypothetical protein K06890 K06890; uncharacterized protein
D PGA1_c18340 putative baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D PGA1_c18210 phage late control gene D protein (GPD) K06905 D; Bacteriophage probable baseplate hub protein
D PGA1_c18230 phage-related tail protein (gpU) K06906 gpU; phage tail protein
D PGA1_c18270 major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D PGA1_c18260 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D PGA1_c05660 hypothetical protein K06918 K06918; uncharacterized protein
D PGA1_c10740 hypothetical protein K06923 K06923; uncharacterized protein
D PGA1_c09220 hypothetical protein K06929 K06929; uncharacterized protein
D PGA1_262p00240 hypothetical protein K06938 K06938; uncharacterized protein
D PGA1_c19200 hypothetical protein K06938 K06938; uncharacterized protein
D PGA1_c06030 hypothetical protein K06953 K06953; uncharacterized protein
D PGA1_c27520 amine oxidoreductase-like protein K06954 K06954; uncharacterized protein
D PGA1_262p01690 peptidase S15 K06978 K06978; uncharacterized protein
D PGA1_c27860 peptidase S15 K06978 K06978; uncharacterized protein
D PGA1_c26560 hypothetical protein K06991 K06991; uncharacterized protein
D PGA1_c13890 hypothetical protein K06996 K06996; uncharacterized protein
D PGA1_c03530 pyridoxamine 5'-phosphate oxidase-like protein K07006 K07006; uncharacterized protein
D PGA1_c15340 hypothetical protein K07018 K07018; uncharacterized protein
D PGA1_c21790 fumarate reductase/succinate dehydrogenase flavoprotein-like protein K07077 K07077; uncharacterized protein
D PGA1_c16180 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D PGA1_262p01990 hypothetical protein K07089 K07089; uncharacterized protein
D PGA1_c28790 hypothetical protein K07089 K07089; uncharacterized protein
D PGA1_c01120 sulfite exporter tauE/safE-like protein K07090 K07090; uncharacterized protein
D PGA1_c03660 hypothetical protein K07090 K07090; uncharacterized protein
D PGA1_c03930 hypothetical protein K07090 K07090; uncharacterized protein
D PGA1_c19220 hypothetical protein K07090 K07090; uncharacterized protein
D PGA1_c28830 sulfite exporter tauE/safE-like protein K07090 K07090; uncharacterized protein
D PGA1_c36170 hypothetical protein K07090 K07090; uncharacterized protein
D PGA1_c05800 hypothetical protein K07112 K07112; uncharacterized protein
D PGA1_c10090 hypothetical protein K07112 K07112; uncharacterized protein
D PGA1_c12370 hypothetical protein K07112 K07112; uncharacterized protein
D PGA1_c12740 hypothetical protein K07112 K07112; uncharacterized protein
D PGA1_c12750 hypothetical protein K07112 K07112; uncharacterized protein
D PGA1_c02820 putative transcriptional regulator, AraC family K07118 K07118; uncharacterized protein
D PGA1_c02080 hypothetical protein K07140 K07140; MOSC domain-containing protein
D PGA1_262p00630 hypothetical protein K07148 K07148; uncharacterized protein
D PGA1_c33240 putative ATP-dependent protease La K07157 K07157; uncharacterized protein
D PGA1_c10950 vWA domain-containing protein K07161 K07161; uncharacterized protein
D PGA1_c02130 hypothetical protein K08998 K08998; uncharacterized protein
D PGA1_c16780 hypothetical protein K09005 K09005; uncharacterized protein
D PGA1_c06680 hypothetical protein K09117 K09117; uncharacterized protein
D PGA1_c24450 hypothetical protein K09131 K09131; uncharacterized protein
D PGA1_c25000 hypothetical protein K09160 K09160; uncharacterized protein
D PGA1_c22600 putative carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D PGA1_c27530 hypothetical protein K09701 K09701; uncharacterized protein
D PGA1_c31620 hypothetical protein K09768 K09768; uncharacterized protein
D PGA1_c11130 hypothetical protein K09780 K09780; uncharacterized protein
D PGA1_c35470 yciI; protein YciI K09780 K09780; uncharacterized protein
D PGA1_c17240 hypothetical protein K09781 K09781; uncharacterized protein
D PGA1_c02480 hypothetical protein K09786 K09786; uncharacterized protein
D PGA1_c35060 inner membrane protein K09790 K09790; uncharacterized protein
D PGA1_c33250 hypothetical protein K09791 K09791; uncharacterized protein
D PGA1_c21650 hypothetical protein K09794 K09794; uncharacterized protein
D PGA1_c07630 hypothetical protein K09807 K09807; uncharacterized protein
D PGA1_78p00240 hypothetical protein K09822 K09822; uncharacterized protein
D PGA1_c31890 hypothetical protein K09861 K09861; uncharacterized protein
D PGA1_c31100 hypothetical protein K09862 K09862; uncharacterized protein
D PGA1_c29300 hypothetical protein K09919 K09919; uncharacterized protein
D PGA1_c05770 hypothetical protein K09921 K09921; uncharacterized protein
D PGA1_c33880 hypothetical protein K09927 K09927; uncharacterized protein
D PGA1_c01020 hypothetical protein K09928 K09928; uncharacterized protein
D PGA1_c21010 hypothetical protein K09930 K09930; uncharacterized protein
D PGA1_c08260 hypothetical protein K09947 K09947; uncharacterized protein
D PGA1_c06960 hypothetical protein K09948 K09948; uncharacterized protein
D PGA1_262p01620 hypothetical protein K09950 K09950; uncharacterized protein
D PGA1_78p00470 hypothetical protein K09956 K09956; uncharacterized protein
D PGA1_c04880 hypothetical protein K09966 K09966; uncharacterized protein
D PGA1_c03810 hypothetical protein K09967 K09967; uncharacterized protein
D PGA1_c26180 hypothetical protein K09981 K09981; uncharacterized protein
D PGA1_c13540 hypothetical protein K09985 K09985; uncharacterized protein
D PGA1_c31810 hypothetical protein K09986 K09986; uncharacterized protein
D PGA1_c30310 hypothetical protein K09987 K09987; uncharacterized protein
D PGA1_c10980 hypothetical protein K09989 K09989; uncharacterized protein
D PGA1_c23040 hypothetical protein K09992 K09992; uncharacterized protein
D PGA1_c08270 hypothetical protein K07338 K07338; uncharacterized protein
D PGA1_c34630 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: October 3, 2025