+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Pseudomonas graminis
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D FX982_03767 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E FX982_00424 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D FX982_01594 DNA-binding protein HU-beta K05787 hupA; DNA-binding protein HU-alpha
D FX982_00665 DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
D FX982_03414 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D FX982_00135 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D FX982_02072 Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D FX982_02073 Chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D FX982_01492 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D FX982_04202 DNA protection during starvation protein 2 K04047 dps; starvation-inducible DNA-binding protein
D FX982_02620 DNA protection during starvation protein 2 K04047 dps; starvation-inducible DNA-binding protein
D FX982_02106 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D FX982_02021 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D FX982_00528 HTH-type transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D FX982_00908 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FX982_01631 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FX982_03773 Nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D FX982_00666 Nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D FX982_04732 Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D FX982_02773 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D FX982_02774 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
C Divisome proteins
D FX982_00567 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D FX982_02578 Cell division protein FtsB K05589 ftsB; cell division protein FtsB
D FX982_01287 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D FX982_00577 Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D FX982_03035 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D FX982_00578 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D FX982_00568 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D FX982_00572 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D FX982_01286 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D FX982_00566 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D FX982_04731 Cell division protein ZipA K03528 zipA; cell division protein ZipA
D FX982_01185 hypothetical protein K09888 zapA; cell division protein ZapA
D FX982_01704 Cell division protein ZapA K09888 zapA; cell division protein ZapA
D FX982_01705 hypothetical protein K09892 zapB; cell division protein ZapB
D FX982_00596 Cell division protein ZapE K06916 zapE; cell division protein ZapE
D FX982_03197 Cell division protein ZapE K06916 zapE; cell division protein ZapE
D FX982_01542 N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D FX982_02018 N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D FX982_00483 Multidrug/solvent efflux pump periplasmic linker protein MepA K03585 acrA; membrane fusion protein, multidrug efflux system
D FX982_00540 Multidrug resistance protein MexA K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D FX982_02729 Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D FX982_02728 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D FX982_02727 Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D FX982_04576 Cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
C Other chromosome partitioning proteins
D FX982_02388 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D FX982_02389 Cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D FX982_02390 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D FX982_00938 Peptidoglycan glycosyltransferase MrdB K05837 rodA; rod shape determining protein RodA
D FX982_04772 Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D FX982_01498 Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D FX982_01927 Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D FX982_01499 putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FX982_02002 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D FX982_01999 DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D FX982_01496 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D FX982_01497 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D FX982_01653 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D FX982_02497 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D FX982_00357 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D FX982_00250 putative adenosine monophosphate-protein transferase fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D FX982_01431 putative GTP-binding protein EngB K03978 engB; GTP-binding protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024