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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Pedobacter gandavensis</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
D      Pol II specific subunits
D      Pol I, II, III common subunits
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
D      TFIIE
D      TFIIF
D      TFIIH
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
C    Coactivators
D      SAGA/TFTC/STAGA complex
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
D      Transcription termination factor
D      PAF1 complex
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
D      Pol III specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
D      Octamer transcription factors
D      Others
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
D      Pol I specific subunits
D      Pol I, II, III common subunits
C    Basal transcription factors
D      SL1/TIF-1B
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
E        QG516_17625 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] 
E        QG516_18410 rpoB; DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] 
E        QG516_18415 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] 
D      Sigma factors
E        QG516_07460 RNA polymerase sigma factor RpoD/SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        QG516_08630 RNA polymerase sigma factor RpoD/SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        QG516_19285 RNA polymerase sigma factor RpoD/SigA	K03086 rpoD; RNA polymerase primary sigma factor 
E        QG516_18525 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        QG516_17175 RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        QG516_16390 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        QG516_14540 sigma-70 family RNA polymerase sigma factor	K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily 
E        QG516_20420 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_26290 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_06125 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_23505 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_20030 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_00190 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_04805 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_04975 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_19625 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_23855 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_07830 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_08540 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_05860 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_09200 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_05535 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_09325 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_06385 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_05810 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_02500 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_18815 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_14805 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_09265 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_00110 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_15285 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_18120 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_16040 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_12135 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_22515 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_03140 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_01440 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_16260 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_02300 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_07740 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_00990 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_04465 RNA polymerase sigma-70 factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_26095 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_02780 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_11395 sigma-70 family RNA polymerase sigma factor	K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily 
E        QG516_22225 rpoN; RNA polymerase factor sigma-54	K03092 rpoN; RNA polymerase sigma-54 factor 
C    Other transcription-related factors
D      RNA polymerase-associated proteins
E        QG516_15695 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA 
E        QG516_20075 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB 
E        QG516_18385 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG 
D      Transcription elongation factors
E        QG516_16890 TraR/DksA C4-type zinc finger protein	K06204 dksA; RNA polymerase-binding transcription factor 
E        QG516_12785 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA 
D      Transcription termination factor
E        QG516_08925 rho; transcription termination factor Rho	K03628 rho; transcription termination factor Rho 
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024