+F Repair protein KO
#
DNA Repair and Recombination Proteins - Puccinia graminis
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D PGTG_06003 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E PGTG_14239 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E PGTG_07238 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E PGTG_07986 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E PGTG_15525 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E PGTG_11243 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E PGTG_11760 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E PGTG_15983 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E PGTG_14718 exodeoxyribonuclease III K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F PGTG_11678 DNA polymerase delta subunit 1 K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F PGTG_20248 DNA polymerase delta subunit 1 K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F PGTG_08327 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
F PGTG_22205 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E DNA polymerase epsilon complex
F PGTG_17326 DNA polymerase epsilon subunit 1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F PGTG_09771 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F PGTG_20380 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F PGTG_11173 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F PGTG_09116 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E PGTG_16695 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
E PGTG_04137 flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E PGTG_12168 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E PGTG_14494 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E PGTG_02533 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E PGTG_18987 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E PGTG_20262 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F PGTG_21013 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F PGTG_09270 UV excision repair protein Rad23 K10839 RAD23; UV excision repair protein RAD23
F PGTG_19242 UV excision repair protein Rad23 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F PGTG_18192 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F PGTG_10430 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F PGTG_00989 hypothetical protein K10609 CUL4; cullin 4
F PGTG_22575 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F PGTG_00371 hypothetical protein K15082 RAD7; DNA repair protein RAD7
F PGTG_21518 adenosinetriphosphatase K15083 RAD16; DNA repair protein RAD16
F PGTG_13869 adenosinetriphosphatase K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F PGTG_15953 DNA-directed RNA polymerase II subunit A K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F PGTG_03411 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F PGTG_00006 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F PGTG_00505 DNA-directed RNA polymerase II subunit D K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F PGTG_06512 DNA-directed RNA polymerase II subunit E K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F PGTG_05055 DNA-directed RNA Polymerase II subunit F K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F PGTG_17668 DNA-directed RNA polymerase II subunit rpb7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F PGTG_07968 DNA-directed RNA polymerase II subunit H K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F PGTG_00596 DNA-directed RNA polymerase II subunit I K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F PGTG_22023 DNA-directed RNA polymerase I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F PGTG_01293 DNA-directed RNA Polymerase II subunit K K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F PGTG_18192 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F PGTG_10430 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F PGTG_00989 hypothetical protein K10609 CUL4; cullin 4
F PGTG_22575 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E Other TCR factor
F PGTG_08082 hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E PGTG_13525 DNA excision repair protein ERCC-3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E PGTG_21591 DNA excision repair protein ERCC-2 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E PGTG_09050 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E PGTG_14725 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E PGTG_04797 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E PGTG_04930 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E PGTG_19983 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E PGTG_21254 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E PGTG_15320 CMGC/CDK/CDK7 protein kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E PGTG_02714 hypothetical protein K06634 CCNH; cyclin H
E PGTG_03906 hypothetical protein K06634 CCNH; cyclin H
E PGTG_13531 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E PGTG_08418 hypothetical protein K07466 RFA1; replication factor A1
E PGTG_01993 hypothetical protein K10739 RFA2; replication factor A2
E PGTG_22244 hypothetical protein K10739 RFA2; replication factor A2
E PGTG_17672 hypothetical protein K10740 RPA3; replication factor A3
D Other NER factors
E PGTG_13805 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells
E PGTG_12152 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1
E PGTG_20630 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E PGTG_17170 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5
E PGTG_12168 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E PGTG_16095 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E PGTG_08991 hypothetical protein K03869 CUL3; cullin 3
E PGTG_13881 hypothetical protein K03869 CUL3; cullin 3
E PGTG_11270 hypothetical protein K03872 ELOC; elongin-C
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E PGTG_02693 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E PGTG_02803 hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3
E PGTG_17874 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E PGTG_03468 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1
E PGTG_02903 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E PGTG_11678 DNA polymerase delta subunit 1 K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E PGTG_20248 DNA polymerase delta subunit 1 K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E PGTG_08327 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E PGTG_22205 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
D RPA (replication factor A)
E PGTG_08418 hypothetical protein K07466 RFA1; replication factor A1
E PGTG_01993 hypothetical protein K10739 RFA2; replication factor A2
E PGTG_22244 hypothetical protein K10739 RFA2; replication factor A2
E PGTG_17672 hypothetical protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E PGTG_22494 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E PGTG_05828 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
E PGTG_01318 replication factor C subunit 2/4 K10755 RFC2_4; replication factor C subunit 2/4
E PGTG_02873 replication factor C subunit 3/5 K10756 RFC3_5; replication factor C subunit 3/5
E PGTG_12247 replication factor C subunit 3/5 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E PGTG_16695 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
E PGTG_19001 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E PGTG_12168 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E PGTG_08782 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E PGTG_06908 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E PGTG_04094 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E PGTG_06908 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E PGTG_04094 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E PGTG_20647 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
E PGTG_14286 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E PGTG_14286 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
E PGTG_15555 hypothetical protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E PGTG_13795 DNA repair and recombination protein RAD52 K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E PGTG_21441 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E PGTG_02278 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E PGTG_15039 hypothetical protein K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E PGTG_13483 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E PGTG_13483 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E PGTG_08051 DNA topoisomerase III K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E PGTG_14949 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
E PGTG_14951 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E PGTG_08418 hypothetical protein K07466 RFA1; replication factor A1
E PGTG_01993 hypothetical protein K10739 RFA2; replication factor A2
E PGTG_22244 hypothetical protein K10739 RFA2; replication factor A2
E PGTG_17672 hypothetical protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E PGTG_17157 serine/threonine-protein phosphatase 4 catalytic subunit K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E PGTG_06721 hypothetical protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E PGTG_15272 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E PGTG_22418 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E PGTG_14771 hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5
E PGTG_19860 myosin ATPase K22804 SMC6; structural maintenance of chromosomes protein 6
E PGTG_15159 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E PGTG_03442 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E PGTG_15091 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E PGTG_09243 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E PGTG_10837 hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E PGTG_20787 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E PGTG_07324 hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E PGTG_08936 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E PGTG_11201 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E PGTG_15360 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E PGTG_16527 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E PGTG_15602 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E PGTG_17854 hypothetical protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E PGTG_16384 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E PGTG_17028 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E PGTG_06908 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E PGTG_04094 hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E PGTG_21909 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E PGTG_03814 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
D Other NHEJ factors
E PGTG_07975 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E PGTG_00113 hypothetical protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E PGTG_13483 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E PGTG_08051 DNA topoisomerase III K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E PGTG_14949 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
E PGTG_14951 hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
E PGTG_20647 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
D Other FA pathway factors
E PGTG_20788 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E PGTG_14286 DNA repair protein RAD51 K04482 RAD51; DNA repair protein RAD51
E PGTG_09056 hypothetical protein K11137 TELO2; telomere length regulation protein
E PGTG_15666 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E PGTG_04520 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E PGTG_09973 hypothetical protein K24752 WDR70; WD repeat-containing protein 70
E PGTG_08782 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D PGTG_04360 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D PGTG_11449 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D PGTG_03393 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D PGTG_07406 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D PGTG_03687 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D PGTG_20712 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D PGTG_13023 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D PGTG_18741 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D PGTG_11982 hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D PGTG_00304 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D PGTG_19485 ubiquitin-conjugating enzyme E2 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D PGTG_11345 ubiquitin-conjugating enzyme E2 N K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D PGTG_16695 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D PGTG_19625 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
D PGTG_10652 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D PGTG_15421 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D PGTG_13935 hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D PGTG_05478 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D PGTG_17303 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D PGTG_05828 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D PGTG_01318 replication factor C subunit 2/4 K10755 RFC2_4; replication factor C subunit 2/4
D PGTG_02873 replication factor C subunit 3/5 K10756 RFC3_5; replication factor C subunit 3/5
D PGTG_12247 replication factor C subunit 3/5 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D PGTG_05478 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D PGTG_10726 hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D PGTG_01240 replication fork protection complex subunit Csm3/Swi3 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D PGTG_19913 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D PGTG_09056 hypothetical protein K11137 TELO2; telomere length regulation protein
D PGTG_04240 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D PGTG_16233 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D PGTG_06704 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D PGTG_12078 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D PGTG_22077 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D PGTG_00714 CAMK/CAMKL/CHK1 protein kinase K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D PGTG_08704 hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D PGTG_10474 14-3-3 family protein K06630 YWHAE; 14-3-3 protein epsilon
D PGTG_19162 14-3-3 family protein K06630 YWHAE; 14-3-3 protein epsilon
D PGTG_19733 WEE protein kinase K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D PGTG_05803 vacuolar protein sorting-associated protein 4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D PGTG_00035 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D PGTG_02163 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D PGTG_08794 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D PGTG_02769 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
C Helicases
D PGTG_07403 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
D PGTG_07404 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D PGTG_04357 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D PGTG_19241 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D PGTG_00129 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D PGTG_02561 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D PGTG_21338 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PGTG_11083 ribonucleoside-diphosphate reductase large chain K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D PGTG_17235 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D PGTG_06003 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E PGTG_14239 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E PGTG_07238 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E PGTG_14148 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E PGTG_15525 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E PGTG_11760 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E PGTG_15983 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E PGTG_17245 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E PGTG_17245 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F PGTG_02240 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F PGTG_18702 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F PGTG_04598 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F PGTG_18027 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D PGTG_21338 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024