+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Pantherophis guttatus (corn snake)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        117660070 POLR2A; LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        117661759 POLR2B; DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        117670382 POLR2C; DNA-directed RNA polymerase II subunit RPB3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        117667778 POLR2J; DNA-directed RNA polymerase II subunit RPB11-a	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        117678548 POLR2D; DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        117659999 POLR2G; DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        117677789 POLR2I; DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        117660963 POLR2M; protein GRINL1A	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        117677465 POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        117655562 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        117679780 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        117668548 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform X1	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        117669129 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        117665204 POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        117665884 transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        117671526 GTF2A1L; TFIIA-alpha and beta-like factor isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        132710677 GTF2A1; transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        117660978 GTF2A2; transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        117677162 GTF2B; transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        117666281 TBPL1; TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117675102 TBPL2; TATA box-binding protein-like 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117672027 TBP; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117679615 TAF1; transcription initiation factor TFIID subunit 1 isoform X4	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        117668379 TAF2; transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        117676841 TAF3; transcription initiation factor TFIID subunit 3 isoform X1	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        117674904 TAF4; transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        117672723 TAF4B; transcription initiation factor TFIID subunit 4B	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        117672011 TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        117678665 TAF5; transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        117670844 TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        117673426 TAF6; transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        117665108 TAF7L; transcription initiation factor TFIID subunit 7-like isoform X1	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        117664333 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        132711181 TAF8; transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        117658438 transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        117663962 TAF11; transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        117663454 TAF12; transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        117662470 TAF13; transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        117667513 TAF15; TATA-binding protein-associated factor 2N	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      TFIIE
E        117661880 GTF2E1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        117661731 GTF2E2; transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        117675604 GTF2F1; general transcription factor IIF subunit 1 isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        117664896 GTF2F2; general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        117665262 GTF2H1; general transcription factor IIH subunit 1 isoform X1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        117679332 GTF2H2; general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        117672184 GTF2H3; general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        117667971 GTF2H4; general transcription factor IIH subunit 4 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        117668259 ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        117677814 ERCC2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        117672102 GTF2H5; general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        117679260 CDK7; cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        117675154 MNAT1; CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        117679367 CCNH; cyclin-H	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        117665601 MED6; mediator of RNA polymerase II transcription subunit 6 isoform X1	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        117664089 MED8; mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        117660533 MED17; mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        117663435 MED18; mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        117667114 MED19; mediator of RNA polymerase II transcription subunit 19 isoform X1	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        117663933 mediator of RNA polymerase II transcription subunit 20 isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        132711275 MED20; mediator of RNA polymerase II transcription subunit 20 isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        117656275 MED22; mediator of RNA polymerase II transcription subunit 22 isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        117680172 MED28; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        117677785 MED29; mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        117668370 MED30; mediator of RNA polymerase II transcription subunit 30 isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        117664681 MED1; mediator of RNA polymerase II transcription subunit 1 isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        117654776 MED7; mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        117679533 MED9; mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        117662392 MED10; mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        117675792 MED21; mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        117667598 MED31; mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        117669418 MED14; mediator of RNA polymerase II transcription subunit 14 isoform X3	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        117677942 MED15; mediator of RNA polymerase II transcription subunit 15	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        117677460 MED16; mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        117661601 CDK8; cyclin-dependent kinase 8 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        117660851 CDK19; cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        117660797 CCNC; cyclin-C	K15161 CCNC; cyclin-C 
E        117678273 MED12L; mediator of RNA polymerase II transcription subunit 12-like protein isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        117679614 MED12; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        117675675 MED13; mediator of RNA polymerase II transcription subunit 13 isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        117666266 MED23; mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        117664659 MED24; mediator of RNA polymerase II transcription subunit 24 isoform X1	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        117664453 MED25; mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        117677404 MED26; mediator of RNA polymerase II transcription subunit 26	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        117655129 KAT2B; histone acetyltransferase KAT2B isoform X3	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        117665014 KAT2A; histone acetyltransferase KAT2A	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        117675695 TADA2A; transcriptional adapter 2-alpha isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        117662337 TADA2B; transcriptional adapter 2-beta	K15127 TADA2B; transcriptional adapter 2-beta 
E        117673984 TADA3; transcriptional adapter 3 isoform X1	K11315 TADA3; transcriptional adapter 3 
E        117661198 TADA1; transcriptional adapter 1 isoform X1	K11317 TADA1; transcriptional adapter 1 
E        117668379 TAF2; transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        117674904 TAF4; transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        117672723 TAF4B; transcription initiation factor TFIID subunit 4B	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        117672011 TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        117678665 TAF5; transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        117670844 TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        117673426 TAF6; transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        117665108 TAF7L; transcription initiation factor TFIID subunit 7-like isoform X1	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        117658438 transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        117663454 TAF12; transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        117664702 ATXN7L3; ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        117669172 SGF29; SAGA-associated factor 29 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        117671810 SUPT7L; STAGA complex 65 subunit gamma	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        117664046 ATXN7L2; ataxin-7-like protein 2 isoform X1	K11318 ATXN7; ataxin-7 
E        117675203 ATXN7L1; ataxin-7-like protein 1 isoform X1	K11318 ATXN7; ataxin-7 
E        117679038 ATXN7; ataxin-7 isoform X1	K11318 ATXN7; ataxin-7 
E        117679092 CHD1; chromodomain-helicase-DNA-binding protein 1 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        117668355 ENY2; transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        117676772 USP22; ubiquitin carboxyl-terminal hydrolase 22 isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        117670474 SF3B3; splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        117661479 SMARCA2; probable global transcription activator SNF2L2 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        117675619 SMARCA4; transcription activator BRG1 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        117677968 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        117662757 SMARCC2; SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        117673257 SMARCC1; SWI/SNF complex subunit SMARCC1 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        117664609 SMARCD2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        117669207 SMARCD3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        117662793 SMARCD1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        117664638 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        117676791 ACTB; actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        117662974 ACTG1; actin, cytoplasmic 2	K05692 ACTB_G1; actin beta/gamma 1 
E        117678163 ACTL6A; actin-like protein 6A isoform X1	K11340 ACTL6A; actin-like protein 6A 
E        117676812 ACTL6B; actin-like protein 6B	K11652 ACTL6B; actin-like protein 6B 
E        117663409 ARID1A; AT-rich interactive domain-containing protein 1A isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        117672108 ARID1B; AT-rich interactive domain-containing protein 1B isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        117655527 AT-rich interactive domain-containing protein 2 isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        132712611 AT-rich interactive domain-containing protein 2-like isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        117678208 PBRM1; protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        117677968 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        117680010 SUB1; activated RNA polymerase II transcriptional coactivator p15 isoform X2	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        117678027 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        117678000 CCAR1; cell division cycle and apoptosis regulator protein 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        117662655 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        117654865 TCEA2; transcription elongation factor A protein 2 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        117663443 TCEA3; transcription elongation factor A protein 3 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        117672793 TCEA1; transcription elongation factor A protein 1 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        117667553 SUPT4H1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        117677757 SUPT5H; transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        117669803 SUPT6H; transcription elongation factor SPT6 isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        117664019 TTF2; transcription termination factor 2	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        117666981 CPSF1; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        117674211 CPSF3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        117676781 CPSF4; cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        117671800 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        117675344 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        117672240 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        117677743 SYMPK; symplekin	K06100 SYMPK; symplekin 
E        117675847 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        117662370 XRN2; 5'-3' exoribonuclease 2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        117667856 DXO; decapping and exoribonuclease protein isoform X1	K14845 RAI1; RAT1-interacting protein 
E        117664899 RPRD1A; regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        117666642 RPRD1B; regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        117663319 SFPQ; splicing factor, proline- and glutamine-rich isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        117672112 SCAF8; SR-related and CTD-associated factor 8 isoform X1	K13191 RBM16; RNA-binding protein 16 
E        117674068 SCAF4; SR-related and CTD-associated factor 4 isoform X3	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        117656266 SETX; probable helicase senataxin isoform X1	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        117666588 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        117677767 PAF1; RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        117661080 CDC73; parafibromin	K15175 CDC73; parafibromin 
E        117665334 CTR9; RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        117674588 LEO1; RNA polymerase-associated protein LEO1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        117665660 RTF1; RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        117664726 negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        132710438 NELFA; negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        117670267 NELFB; negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        117674883 NELFCD; negative elongation factor C/D isoform X1	K15181 TH1L; negative elongation factor C/D 
E        117667855 NELFE; negative elongation factor E isoform X1	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        117677445 ELL; RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        117679080 ELL2; RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        117678931 AFF1; AF4/FMR2 family member 1 isoform X1	K15184 AFF1; AF4/FMR2 family member 1 
E        117656513 AFF4; AF4/FMR2 family member 4 isoform X1	K15185 AFF4; AF4/FMR2 family member 4 
E        117668640 EAF2; ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        117656070 ELL-associated factor 1 isoform X1	K15186 EAF; ELL-associated factor 
E        132709578 ELL-associated factor 1-like isoform X1	K15186 EAF; ELL-associated factor 
E        117661538 MLLT3; protein AF-9 isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        117656222 protein ENL isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        132710523 LOW QUALITY PROTEIN: protein ENL-like	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        117662733 CCNT1; cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        117669540 CCNT2; cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
D      Little elongation complex (LEC)
E        117677445 ELL; RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        117679080 ELL2; RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        117662393 ICE1; little elongation complex subunit 1	K26143 ICE1; little elongation complex subunit 1 
E        117660973 ICE2; little elongation complex subunit 2 isoform X1	K26144 ICE2; little elongation complex subunit 2 
D      Brd4/P-TEFb complex
E        117659564 BRD4; bromodomain-containing protein 4 isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        117662733 CCNT1; cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        117669540 CCNT2; cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        117664744 HEXIM1; protein HEXIM1	K15189 HEXIM1_2; protein HEXIM1/2 
E        117676809 MEPCE; 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        117679956 LARP7; la-related protein 7 isoform X1	K15191 LARP7; La-related protein 7 
E        117662733 CCNT1; cyclin-T1 isoform X1	K15188 CCNT; cyclin T 
E        117669540 CCNT2; cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
D      DBIRD complex
E        117668300 CCAR2; cell cycle and apoptosis regulator protein 2	K25816 CCAR2; cell cycle and apoptosis regulator protein 2 
E        117677170 ZNF326; DBIRD complex subunit ZNF326 isoform X1	K13204 ZNF326; zinc finger protein 326 
D      Others
E        117667465 GTF2I; general transcription factor II-I isoform X1	K03121 TFII-I; transcription initiation factor TFII-I 
E        117667467 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 isoform X1	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        117673203 BTAF1; TATA-binding protein-associated factor 172 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        117677245 DR1; protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        117669741 DRAP1; dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        117665257 SPTY2D1; protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        117677971 AFF2; AF4/FMR2 family member 2 isoform X1	K15194 AFF2; AF4/FMR2 family member 2 
E        117673731 AFF3; AF4/FMR2 family member 3 isoform X2	K15195 AFF3; AF4/FMR2 family member 3 
E        117672571 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        117654764 CTDSPL; CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        117662686 CTDSP2; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        117675242 CTDSP1; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        117678536 IWS1; protein IWS1 homolog isoform X1	K17498 SPN1; transcription factor SPN1 
E        117654755 CSRNP1; cysteine/serine-rich nuclear protein 1 isoform X1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        117662692 CSRNP2; cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        117671010 CSRNP3; cysteine/serine-rich nuclear protein 3	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        117665656 RPAP1; RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        117677184 RPAP2; putative RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        117655594 RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        132712607 LOW QUALITY PROTEIN: RNA polymerase II-associated protein 3-like	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        117665970 CCNK; cyclin-K isoform X1	K23326 CCNK; cyclin K 
E        117658631 GPN3; GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        117663415 GPN2; GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        117667613 GPN1; GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        117669493 POLR3A; DNA-directed RNA polymerase III subunit RPC1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        117655816 POLR3B; DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        117671862 POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        117669524 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        117671350 POLR3C; DNA-directed RNA polymerase III subunit RPC3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        117674747 POLR3D; DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        117678094 POLR3E; DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        117660683 DNA-directed RNA polymerase III subunit RPC6 isoform X1	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        132710482 POLR3F; DNA-directed RNA polymerase III subunit RPC6 isoform X1	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        117671189 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        132709291 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        117655525 POLR3H; DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        117667532 CRCP; DNA-directed RNA polymerase III subunit RPC9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        117679452 POLR3K; DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        117677465 POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        117655562 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        117679780 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        117668548 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform X1	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        117669129 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        117665204 POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        117661649 GTF3A; transcription factor IIIA isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        117666281 TBPL1; TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117675102 TBPL2; TATA box-binding protein-like 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117672027 TBP; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117675181 BRF1; transcription factor IIIB 90 kDa subunit isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        117677018 BRF2; transcription factor IIIB 50 kDa subunit	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        117679328 BDP1; transcription factor TFIIIB component B'' homolog isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        117679445 GTF3C1; general transcription factor 3C polypeptide 1 isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        117667625 GTF3C2; general transcription factor 3C polypeptide 2 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        117672852 GTF3C3; general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        117656251 GTF3C5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        117655310 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 6-like	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
E        117660854 GTF3C6; general transcription factor 3C polypeptide 6 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        117656251 GTF3C5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        117672852 GTF3C3; general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        117675158 SNAPC1; snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        117664073 SNAPC2; snRNA-activating protein complex subunit 2	K15209 SNAPC2; snRNA-activating protein complex subunit 2 
E        117661517 SNAPC3; snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        117671290 SNAPC4; snRNA-activating protein complex subunit 4 isoform X1	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        117676178 SNAPC5; snRNA-activating protein complex subunit 5	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
D      Octamer transcription factors
E        117663654 POU2F1; POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        117677658 POU2F2; POU domain, class 2, transcription factor 2 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        117673216 POU2F3; POU domain, class 2, transcription factor 3	K09364 POU2F; POU domain transcription factor, class 2 
E        117667944 POU5F1; POU domain, class 5, transcription factor 1	K09367 POU5F; POU domain transcription factor, class 5 
D      Others
E        117663955 ZNF76; zinc finger protein 76 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        117665320 ZNF143; zinc finger protein 143	K20828 ZNF143_76; zinc finger protein 143/76 
E        117666954 MAF1; repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        117664810 POLR1A; DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        117671585 POLR1B; DNA-directed RNA polymerase I subunit RPA2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        117671862 POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        117669524 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        117661687 POLR1E; DNA-directed RNA polymerase I subunit RPA49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        117655233 POLR1F; DNA-directed RNA polymerase I subunit RPA43	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        117677615 POLR1G; DNA-directed RNA polymerase I subunit RPA34	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        117668019 POLR1H; DNA-directed RNA polymerase I subunit RPA12 isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        117677465 POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        117655562 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        117679780 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        117668548 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform X1	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        117669129 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
E        117665204 POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        117666281 TBPL1; TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117675102 TBPL2; TATA box-binding protein-like 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117672027 TBP; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        117671739 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        117674216 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        117679725 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X2	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
E        117660505 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X2	K15215 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D 
C    Other transcription-related factors
D      UBF
E        117664699 UBTF; nucleolar transcription factor 1 isoform X1	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        117673089 RRN3; RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        117667553 SUPT4H1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        117677757 SUPT5H; transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        117654645 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X3	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        117662777 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A isoform X1	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
D      CTDK-I complex
D      Transcription termination factors
E        117659417 TTF1; transcription termination factor 1 isoform X2	K15225 TTF1; transcription termination factor 1 
E        117664598 CAVIN1; caveolae-associated protein 1	K19387 PTRF; polymerase I and transcript release factor 
D      Others
E        117676088 NOLC1; nucleolar and coiled-body phosphoprotein 1 isoform X1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        117677162 GTF2B; transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        117661880 GTF2E1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024