+D GENES KO #

  KEGG Orthology (KO) - Parasphingorhabdus halotolerans

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:phao00010] D HF685_15390 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D HF685_02370 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HF685_00475 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HF685_14460 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_01295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HF685_01075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HF685_01080 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HF685_12445 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HF685_02985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HF685_04985 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HF685_01795 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D HF685_01800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_00280 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HF685_00285 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HF685_03175 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:phao00020] D HF685_01235 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D HF685_15990 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HF685_09985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_00280 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HF685_00285 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HF685_09995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HF685_11290 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HF685_04250 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HF685_10035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HF685_04260 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HF685_04255 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HF685_07105 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D HF685_05720 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HF685_03175 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D HF685_04985 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HF685_01795 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D HF685_01800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] C 00030 Pentose phosphate pathway [PATH:phao00030] D HF685_02370 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HF685_12180 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D HF685_12380 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HF685_01070 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HF685_06545 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HF685_00155 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HF685_10890 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HF685_15385 hypothetical protein K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D HF685_13580 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HF685_14805 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D HF685_13585 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_14460 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D HF685_00475 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:phao00040] D HF685_13565 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D HF685_14085 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D HF685_13595 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D HF685_05005 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HF685_12925 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HF685_12380 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:phao00051] D HF685_05010 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HF685_10355 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HF685_05015 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HF685_00475 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HF685_14460 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_01295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HF685_00155 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HF685_03200 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:phao00052] D HF685_05085 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HF685_10185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HF685_12925 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HF685_15390 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D HF685_05105 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D HF685_05100 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HF685_00475 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:phao00053] D HF685_05005 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HF685_14805 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D HF685_10705 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:phao00500] D HF685_12925 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HF685_03875 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D HF685_15390 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D HF685_02370 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:phao00520] D HF685_06930 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HF685_03500 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HF685_04135 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HF685_03520 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HF685_01375 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D HF685_01380 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D HF685_11390 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HF685_06770 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HF685_11145 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HF685_11150 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D HF685_11020 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D HF685_11090 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D HF685_11065 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D HF685_15390 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D HF685_12925 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HF685_05005 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HF685_05085 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HF685_10185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HF685_10705 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HF685_03200 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HF685_02370 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HF685_05010 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HF685_10355 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HF685_05015 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HF685_03875 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D HF685_03870 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] C 00620 Pyruvate metabolism [PATH:phao00620] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HF685_00280 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HF685_00285 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HF685_04985 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HF685_01795 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D HF685_01800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_05515 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_06305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HF685_12705 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HF685_12700 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HF685_00435 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_04230 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D HF685_06080 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D HF685_06075 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HF685_09110 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HF685_15260 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HF685_07105 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D HF685_05720 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HF685_14915 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HF685_03175 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D HF685_02985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HF685_15790 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_02885 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:phao00630] D HF685_04805 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HF685_15790 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HF685_01235 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_02310 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D HF685_02360 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D HF685_02325 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D HF685_03925 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D HF685_15125 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HF685_12505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HF685_00160 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HF685_06720 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HF685_06715 aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HF685_06730 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_06725 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D HF685_13580 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:phao00640] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HF685_01005 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HF685_01010 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HF685_01015 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_06305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HF685_12705 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HF685_12700 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HF685_00435 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HF685_02310 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D HF685_02360 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D HF685_02325 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D HF685_11290 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HF685_09995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HF685_06660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00650 Butanoate metabolism [PATH:phao00650] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14965 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D HF685_14000 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_05515 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D HF685_05550 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D HF685_04250 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HF685_10035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HF685_04260 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HF685_04255 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HF685_00280 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HF685_00285 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HF685_09625 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HF685_13270 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D HF685_13280 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D HF685_04215 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D HF685_01455 SDR family oxidoreductase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D HF685_01495 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02850 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_14795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:phao00660] D HF685_01495 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02850 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_14795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HF685_11290 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HF685_09995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HF685_09495 MaoC family dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D HF685_09500 CoA ester lyase K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25] D HF685_05990 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HF685_05980 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HF685_00545 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:phao00562] D HF685_01105 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D HF685_04915 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D HF685_13815 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D HF685_06660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HF685_01295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:phao00190] D HF685_01110 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HF685_01115 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HF685_01120 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D HF685_01125 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D HF685_01130 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D HF685_01140 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D HF685_01150 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D HF685_01155 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HF685_01160 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HF685_01165 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D HF685_01170 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HF685_01175 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HF685_01180 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HF685_01185 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HF685_00480 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D HF685_04250 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HF685_10035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HF685_04260 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HF685_04255 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HF685_03420 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HF685_03415 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HF685_03410 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D HF685_14720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D HF685_14270 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D HF685_14735 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D HF685_14715 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D HF685_14710 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D HF685_14730 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D HF685_10075 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D HF685_15515 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D HF685_15520 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D HF685_15525 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D HF685_14265 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D HF685_14260 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D HF685_14255 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D HF685_07830 hypothetical protein K08738 CYC; cytochrome c D HF685_09610 c-type cytochrome K08738 CYC; cytochrome c D HF685_09835 cytochrome c family protein K08738 CYC; cytochrome c D HF685_15205 cytochrome c family protein K08738 CYC; cytochrome c D HF685_06590 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HF685_06600 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HF685_06595 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HF685_06585 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HF685_06605 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HF685_00515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HF685_00525 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HF685_00530 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HF685_00520 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HF685_11305 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D HF685_15890 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:phao00710] D HF685_01080 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HF685_01075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_14460 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D HF685_01070 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HF685_00155 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HF685_01295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HF685_12380 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HF685_06545 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HF685_14915 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HF685_03175 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D HF685_02985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HF685_15260 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:phao00720] D HF685_02985 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HF685_14915 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HF685_07105 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D HF685_05720 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HF685_04250 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D HF685_10035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D HF685_04260 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D HF685_04255 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D HF685_09995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D HF685_11290 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_00280 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HF685_00285 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HF685_15990 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HF685_06305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HF685_12705 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HF685_12700 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HF685_00435 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HF685_02325 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D HF685_15280 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HF685_07510 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:phao00680] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_05060 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D HF685_00160 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HF685_14915 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_14460 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D HF685_00475 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HF685_12445 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HF685_09805 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HF685_09810 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HF685_02840 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:phao00910] D HF685_14350 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D HF685_14345 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D HF685_14340 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D HF685_14330 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D HF685_02890 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D HF685_02455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_12130 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_09690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HF685_07880 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HF685_12505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HF685_04660 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HF685_11630 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HF685_04655 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HF685_11640 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HF685_04525 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:phao00920] D HF685_05505 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D HF685_10700 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D HF685_04950 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D HF685_04945 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D HF685_04955 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D HF685_03990 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D HF685_03980 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D HF685_15020 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D HF685_03590 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HF685_00365 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HF685_06840 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HF685_00550 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D HF685_12895 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D HF685_00345 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:phao00061] D HF685_06305 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HF685_12705 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HF685_12700 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HF685_00435 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HF685_02910 acyl carrier protein K02078 acpP; acyl carrier protein D HF685_08400 acyl carrier protein K02078 acpP; acyl carrier protein D HF685_03310 acyl carrier protein K02078 acpP; acyl carrier protein D HF685_02925 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HF685_09080 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HF685_02905 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HF685_02915 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_04265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05410 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05605 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_07095 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09530 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_12140 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_00035 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HF685_09765 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HF685_11585 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D HF685_05920 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_06065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_15465 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:phao00071] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_14000 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D HF685_02935 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_07785 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_07800 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_08765 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_12150 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_13365 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_11865 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_10695 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D HF685_05920 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_06065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_15465 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_03335 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:phao00561] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_03405 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D HF685_00940 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D HF685_09085 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HF685_02400 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HF685_10805 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HF685_00945 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D HF685_12085 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D HF685_00955 alpha/beta hydrolase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D HF685_05100 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:phao00564] D HF685_00965 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HF685_13900 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HF685_03400 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HF685_00940 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D HF685_02400 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HF685_10805 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HF685_06975 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D HF685_08630 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D HF685_00010 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HF685_16000 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D HF685_03610 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D HF685_07485 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:phao00600] D HF685_05100 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism [PATH:phao00590] D HF685_08165 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D HF685_12960 arachidonate 15-lipoxygenase K19246 loxA; arachidonate 15-lipoxygenase [EC:1.13.11.33] C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:phao01040] D HF685_14855 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D HF685_04675 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D HF685_14010 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D HF685_13665 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:phao00230] D HF685_15730 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D HF685_10890 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HF685_00325 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HF685_07310 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HF685_11040 hypothetical protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HF685_15870 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HF685_06885 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D HF685_08565 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D HF685_08865 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D HF685_08870 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HF685_15875 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HF685_12430 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D HF685_12435 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HF685_08850 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HF685_00470 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HF685_12390 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HF685_13040 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HF685_14625 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HF685_05180 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HF685_00255 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HF685_15830 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HF685_06490 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HF685_09615 nucleotidyltransferase family protein K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D HF685_08680 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HF685_05750 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HF685_07090 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HF685_07085 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HF685_13230 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HF685_04620 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HF685_15895 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HF685_01540 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D HF685_14125 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D HF685_09795 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HF685_15145 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D HF685_07890 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HF685_02015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HF685_15175 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D HF685_04950 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D HF685_04945 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:phao00240] D HF685_01730 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HF685_02810 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HF685_02815 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HF685_11340 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HF685_06055 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D HF685_14705 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HF685_00460 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HF685_15830 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HF685_02015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HF685_07035 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HF685_10555 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HF685_01315 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HF685_05855 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HF685_05135 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D HF685_14625 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HF685_04010 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HF685_07090 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HF685_07085 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HF685_02050 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D HF685_09275 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HF685_04390 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D HF685_01000 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HF685_03665 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:phao00250] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_07250 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HF685_02125 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HF685_08985 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HF685_12550 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HF685_13720 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D HF685_03245 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HF685_10235 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D HF685_04425 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HF685_09205 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HF685_09795 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HF685_00470 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HF685_02810 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HF685_04660 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HF685_11630 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HF685_04655 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HF685_11640 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HF685_09690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HF685_07880 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HF685_00985 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HF685_12505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HF685_01730 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HF685_08870 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HF685_03500 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HF685_00325 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:phao00260] D HF685_11590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HF685_02560 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HF685_14470 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HF685_06955 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D HF685_14750 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HF685_05205 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D HF685_00160 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HF685_12445 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HF685_09805 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HF685_09810 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HF685_02840 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D HF685_02410 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D HF685_06720 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HF685_06715 aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HF685_06730 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_06725 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D HF685_16000 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D HF685_09910 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HF685_02425 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HF685_04095 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HF685_00440 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HF685_00445 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:phao00270] D HF685_03590 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HF685_00365 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HF685_06840 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HF685_15015 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D HF685_07520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_07515 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_12775 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HF685_05180 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HF685_05170 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D HF685_04065 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D HF685_07075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_08030 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_02510 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HF685_11590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HF685_02560 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HF685_14470 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HF685_06170 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D HF685_00550 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D HF685_02260 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_14530 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_08945 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D HF685_06525 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_15020 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D HF685_10005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HF685_09910 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HF685_09805 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HF685_09810 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:phao00280] D HF685_02260 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_14530 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_00090 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D HF685_01005 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HF685_01010 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HF685_01015 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_02935 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_07785 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_07800 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_08765 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_12150 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_13365 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_11865 acyl-CoA/acyl-ACP dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D HF685_06050 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_02310 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D HF685_02360 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D HF685_02325 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D HF685_04090 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D HF685_06625 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D HF685_06660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_09625 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HF685_13270 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D HF685_13280 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:phao00290] D HF685_02425 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HF685_04095 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HF685_05990 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HF685_05980 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HF685_00545 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D HF685_01495 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02850 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_14795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HF685_02865 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HF685_02475 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HF685_02260 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_14530 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_00090 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D HF685_02885 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:phao00300] D HF685_14470 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HF685_11590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HF685_02560 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HF685_15945 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HF685_09305 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HF685_10100 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D HF685_03480 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HF685_11465 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HF685_02610 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HF685_03295 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HF685_09195 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HF685_06805 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HF685_06800 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:phao00310] D HF685_09985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_15685 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:phao00220] D HF685_03475 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D HF685_04425 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HF685_09205 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HF685_08870 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HF685_12505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HF685_01730 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HF685_09690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D HF685_07880 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_01410 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D HF685_15270 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D HF685_14685 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D HF685_03480 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HF685_12665 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:phao00330] D HF685_11815 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D HF685_11810 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D HF685_00195 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D HF685_10110 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D HF685_00210 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D HF685_02440 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15780 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D HF685_15775 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D HF685_03965 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D HF685_14520 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HF685_00985 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HF685_08380 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HF685_11525 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D HF685_00070 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D HF685_12685 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_15685 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:phao00340] D HF685_01595 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D HF685_09800 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D HF685_05680 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D HF685_00330 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D HF685_05700 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D HF685_05705 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D HF685_11075 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D HF685_05695 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D HF685_11070 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D HF685_05710 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D HF685_10815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HF685_10880 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D HF685_01600 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D HF685_12070 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D HF685_12065 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D HF685_12075 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D HF685_12080 arginase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_14955 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:phao00350] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_10815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HF685_12265 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D HF685_07025 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D HF685_12255 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:phao00360] D HF685_04295 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D HF685_09460 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D HF685_02335 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_14965 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_10815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HF685_12265 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D HF685_02175 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D HF685_15685 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HF685_03485 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D HF685_03335 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D HF685_03895 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D HF685_05510 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D HF685_05515 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:phao00380] D HF685_06220 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D HF685_09985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_02455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_12130 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_03485 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:phao00400] D HF685_14565 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HF685_06330 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D HF685_12710 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D HF685_10550 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D HF685_06325 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D HF685_05845 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HF685_09775 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HF685_01285 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HF685_01275 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HF685_01270 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D HF685_00450 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D HF685_01265 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D HF685_00440 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HF685_00445 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HF685_10810 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D HF685_09840 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_10815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HF685_04295 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:phao00410] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_10340 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_06660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:phao00430] D HF685_05055 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_06060 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_10235 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D HF685_09690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D HF685_02030 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:phao00450] D HF685_15015 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D HF685_07520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_07515 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_05170 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D HF685_11250 sufS; SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D HF685_03325 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HF685_04950 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D HF685_04945 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D HF685_02040 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:phao00460] D HF685_02455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_12130 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_05055 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_06060 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_12550 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HF685_13720 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D HF685_00160 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:phao00470] D HF685_02300 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HF685_15685 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HF685_06765 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HF685_08870 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HF685_02405 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HF685_06790 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HF685_09150 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D HF685_02125 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HF685_08985 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HF685_02610 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HF685_03295 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HF685_09195 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HF685_06970 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D HF685_02175 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:phao00480] D HF685_05055 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_06060 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_00055 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D HF685_08945 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D HF685_06525 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D HF685_14675 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HF685_15815 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HF685_05185 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HF685_04975 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06015 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06020 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06030 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_11470 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_11610 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_11995 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_15430 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_15970 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06860 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_02365 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D HF685_15990 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HF685_01340 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D HF685_02520 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D HF685_02440 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:phao00540] D HF685_13050 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:phao00541] D HF685_12925 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HF685_10185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HF685_05005 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HF685_10705 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HF685_03875 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D HF685_03870 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D HF685_05010 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D HF685_10355 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D HF685_05015 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HF685_03520 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HF685_11145 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HF685_11150 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D HF685_11065 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D HF685_11060 SDR family oxidoreductase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D HF685_11055 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D HF685_11140 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D HF685_11020 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D HF685_11090 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:phao00550] D HF685_11390 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HF685_06770 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HF685_06775 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HF685_11855 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HF685_06790 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HF685_06805 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HF685_06765 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HF685_06800 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HF685_11645 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HF685_06795 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HF685_06780 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HF685_02745 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D HF685_04590 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_10485 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_03080 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HF685_06810 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HF685_02055 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:phao00552] D HF685_11645 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HF685_11140 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:phao00543] D HF685_10720 sugar transferase K20997 pslA; polysaccharide biosynthesis protein PslA D HF685_03590 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:phao00730] D HF685_04870 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D HF685_04120 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D HF685_03150 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_03155 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_10090 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HF685_12715 thiS; sulfur carrier protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10] D HF685_01090 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HF685_10445 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HF685_01620 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D HF685_07890 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:phao00740] D HF685_07395 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HF685_12310 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HF685_10925 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HF685_12305 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HF685_10930 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D HF685_12415 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HF685_05505 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D HF685_10700 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D HF685_15730 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:phao00750] D HF685_01935 flavin-binding protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D HF685_09745 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D HF685_09810 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HF685_15800 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D HF685_14700 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D HF685_14750 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:phao00760] D HF685_07250 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HF685_05915 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D HF685_05900 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D HF685_14625 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HF685_11530 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HF685_02015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HF685_07710 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D HF685_10905 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D HF685_01965 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HF685_09300 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D HF685_01645 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D HF685_00625 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D HF685_09000 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D HF685_09010 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D HF685_08995 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:phao00770] D HF685_01495 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02850 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_14795 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HF685_02855 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HF685_02865 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HF685_02475 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HF685_08620 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HF685_10340 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HF685_01195 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D HF685_09270 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HF685_02015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HF685_08530 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HF685_10545 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HF685_14695 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HF685_02260 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_14530 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:phao00780] D HF685_02905 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HF685_02915 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_04265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05410 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05605 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_07095 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09530 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_12140 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_00035 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HF685_09765 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HF685_08405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HF685_02320 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D HF685_01190 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:phao00785] D HF685_03445 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D HF685_01955 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_04985 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D HF685_01795 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D HF685_01800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D HF685_09985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D HF685_01005 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D HF685_01010 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D HF685_01015 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D HF685_06720 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HF685_06715 aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HF685_06730 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HF685_06725 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:phao00790] D HF685_02975 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HF685_08320 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D HF685_14760 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D HF685_15405 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D HF685_04105 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HF685_12425 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HF685_00430 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HF685_07395 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HF685_12310 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HF685_06200 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D HF685_12645 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D HF685_04295 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D HF685_03455 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HF685_03460 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HF685_15040 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HF685_01260 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HF685_03600 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HF685_01360 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D HF685_01255 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HF685_08135 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:phao00670] D HF685_12425 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HF685_15280 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HF685_00160 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HF685_11040 hypothetical protein K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HF685_15870 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HF685_12390 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HF685_06730 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HF685_07520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_07515 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_01000 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D HF685_07510 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HF685_01055 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:phao00860] D HF685_02410 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D HF685_01240 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HF685_12825 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HF685_13910 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D HF685_13915 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D HF685_10565 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D HF685_03430 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D HF685_10570 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D HF685_15095 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D HF685_09190 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D HF685_03970 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D HF685_14720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D HF685_10075 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D HF685_01565 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D HF685_01555 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D HF685_14945 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D HF685_08595 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:phao00130] D HF685_05800 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D HF685_11595 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D HF685_07375 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D HF685_09245 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HF685_11560 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D HF685_12265 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:phao00900] D HF685_10090 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HF685_00015 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HF685_01975 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D HF685_02485 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HF685_13725 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HF685_06950 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_08535 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D HF685_15720 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:phao00906] D HF685_01820 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D HF685_04910 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D HF685_04905 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D HF685_04900 crtY; lycopene beta-cyclase CrtY K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D HF685_05995 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:phao00903] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_13355 SnoaL-like domain-containing protein K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] C 00907 Pinene, camphor and geraniol degradation [PATH:phao00907] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_10670 ATP-grasp domain-containing protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] D HF685_10680 acyl-CoA carboxylase subunit beta K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] D HF685_10675 enoyl-CoA hydratase K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] D HF685_09625 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HF685_01070 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D HF685_06370 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-] D HF685_10395 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:phao01054] D HF685_02125 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HF685_08985 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D HF685_00175 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D HF685_03140 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D HF685_07490 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:phao00332] D HF685_08380 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HF685_11525 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:phao00261] D HF685_04950 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D HF685_04945 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D HF685_11590 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HF685_02560 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HF685_15945 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HF685_09305 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:phao00521] D HF685_15390 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D HF685_01105 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D HF685_04915 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D HF685_13815 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HF685_15390 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:phao00401] D HF685_10810 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_10815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HF685_01285 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HF685_01275 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HF685_02925 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HF685_02915 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_04265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05410 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05605 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_07095 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09530 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_12140 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09765 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HF685_02910 acyl carrier protein K02078 acpP; acyl carrier protein D HF685_08400 acyl carrier protein K02078 acpP; acyl carrier protein D HF685_03310 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:phao00999] D HF685_12775 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HF685_10550 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:phao00362] D HF685_03895 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D HF685_05520 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D HF685_05510 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D HF685_05515 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D HF685_07665 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D HF685_03335 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D HF685_01300 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S D HF685_05315 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S D HF685_12615 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D HF685_14000 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_14965 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:phao00627] D HF685_14665 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D HF685_14670 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D HF685_02455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_12130 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:phao00364] D HF685_10595 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D HF685_13730 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:phao00625] D HF685_13970 alpha/beta fold hydrolase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_05265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HF685_15215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:phao00361] D HF685_13970 alpha/beta fold hydrolase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D HF685_10595 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D HF685_13730 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:phao00623] D HF685_10595 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D HF685_13730 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:phao00622] D HF685_05520 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D HF685_03895 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D HF685_05510 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D HF685_05515 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:phao00633] D HF685_05240 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:phao00643] D HF685_07025 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D HF685_12255 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D HF685_02455 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_12130 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D HF685_05550 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:phao00930] D HF685_09895 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D HF685_14805 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D HF685_06630 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D HF685_10685 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:phao00621] D HF685_03895 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D HF685_05520 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D HF685_05510 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D HF685_05515 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:phao00626] D HF685_05070 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D HF685_07805 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:phao00984] D HF685_05420 FAD-binding protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D HF685_05250 Rieske 2Fe-2S domain-containing protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D HF685_05340 aromatic ring-hydroxylating dioxygenase subunit alpha K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D HF685_05370 Rieske (2Fe-2S) protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D HF685_05540 glyoxalase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D HF685_05525 alpha/beta fold hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D HF685_05620 AMP-binding protein K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D HF685_08370 glucose 1-dehydrogenase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51] D HF685_13350 SDR family oxidoreductase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51] D HF685_13380 glucose 1-dehydrogenase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51] D HF685_15840 SDR family oxidoreductase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51] D HF685_05615 SnoaL-like domain-containing protein K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D HF685_13385 steroid delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:phao03020] D HF685_12980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HF685_12970 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HF685_07845 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HF685_07480 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:phao03010] D HF685_05860 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HF685_16005 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HF685_07965 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HF685_00180 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HF685_07910 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HF685_02950 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HF685_08015 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HF685_07925 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HF685_10065 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HF685_08000 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HF685_07850 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HF685_08020 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HF685_07855 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HF685_07930 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HF685_04370 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HF685_02595 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HF685_07950 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HF685_02955 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HF685_07975 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HF685_09235 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HF685_13215 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HF685_13080 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HF685_07980 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HF685_07995 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HF685_07990 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HF685_07935 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HF685_07920 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HF685_13055 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HF685_02960 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HF685_13060 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HF685_13085 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HF685_10070 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HF685_07945 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HF685_07900 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HF685_07960 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HF685_07840 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HF685_07915 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HF685_02565 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HF685_10865 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HF685_12800 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HF685_07970 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HF685_07985 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HF685_07940 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HF685_03030 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D HF685_12795 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HF685_13260 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HF685_07955 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HF685_07905 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HF685_00040 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HF685_09090 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HF685_10300 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HF685_11495 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HF685_10870 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HF685_10180 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HF685_13690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HF685_13705 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HF685_13710 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:phao00970] D HF685_05835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HF685_13700 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HF685_12060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_02980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_06255 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_03355 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_01640 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HF685_01045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HF685_13470 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HF685_14535 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HF685_04625 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HF685_14435 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HF685_15310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HF685_03395 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HF685_00085 tRNA-His K14226 tRNA-His; tRNA His D HF685_13695 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HF685_05870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_10775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_11655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_02770 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_03905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_15400 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HF685_03090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HF685_13715 tRNA-Met K14230 tRNA-Met; tRNA Met D HF685_01880 tRNA-Ile K14230 tRNA-Met; tRNA Met D HF685_03330 tRNA-Met K14230 tRNA-Met; tRNA Met D HF685_05660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HF685_15635 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HF685_01885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HF685_00590 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_02070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_10220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_10940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_03760 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HF685_09680 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HF685_13950 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HF685_13110 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HF685_12600 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HF685_09215 tRNA-Val K14237 tRNA-Val; tRNA Val D HF685_09070 tRNA-Val K14237 tRNA-Val; tRNA Val D HF685_01240 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HF685_02790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HF685_02780 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HF685_02795 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HF685_15975 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HF685_15915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HF685_03000 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HF685_02995 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HF685_06135 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HF685_14620 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HF685_02040 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HF685_10460 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HF685_12560 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D HF685_06940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HF685_02290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HF685_11315 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HF685_10860 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HF685_10855 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HF685_01680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HF685_11435 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:phao03060] D HF685_07895 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HF685_13100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HF685_01310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HF685_15645 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HF685_15650 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HF685_15640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HF685_11480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HF685_01420 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HF685_11445 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D HF685_02600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HF685_03135 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D HF685_02620 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HF685_06915 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HF685_06910 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D HF685_06905 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D HF685_02375 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HF685_14690 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HF685_12405 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:phao04122] D HF685_03150 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_03155 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_15020 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D HF685_09725 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HF685_03600 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HF685_03605 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D HF685_01260 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HF685_01360 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:phao03018] D HF685_00270 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D HF685_04600 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HF685_04365 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HF685_05050 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D HF685_02285 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HF685_05820 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HF685_07145 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HF685_10575 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HF685_01200 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HF685_06415 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HF685_09920 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HF685_02005 RNA chaperone Hfq K03666 hfq; host factor-I protein D HF685_15890 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HF685_08810 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:phao03030] D HF685_10540 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HF685_01345 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HF685_03130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HF685_02045 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HF685_10470 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HF685_15820 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D HF685_04475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HF685_03995 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HF685_01720 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HF685_02095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_07405 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_11880 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14425 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_06960 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HF685_04115 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HF685_09860 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HF685_04320 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:phao03410] D HF685_09325 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HF685_04755 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_07720 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HF685_09240 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HF685_12620 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D HF685_08770 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D HF685_00220 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_02500 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_14235 DUF4130 domain-containing protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_07390 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HF685_08470 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HF685_09860 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HF685_14440 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HF685_04320 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:phao03420] D HF685_01660 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HF685_05765 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HF685_07560 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HF685_00535 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HF685_00405 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HF685_11670 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HF685_09860 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HF685_04320 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:phao03430] D HF685_15265 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D HF685_03060 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D HF685_00405 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HF685_11670 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HF685_07305 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HF685_08540 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HF685_14440 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HF685_02095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_07405 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_11880 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14425 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_01345 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HF685_04475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HF685_03130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HF685_10470 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HF685_02045 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HF685_10540 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HF685_15820 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D HF685_04320 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:phao03440] D HF685_14440 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HF685_02095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_07405 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_11880 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14425 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_08125 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HF685_00540 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HF685_03230 recR; recombination protein RecR K06187 recR; recombination protein RecR D HF685_15965 recA; recombinase RecA K03553 recA; recombination protein RecA D HF685_09860 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HF685_10130 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HF685_10115 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HF685_10135 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HF685_01670 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HF685_01345 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HF685_04475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HF685_03130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HF685_10470 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HF685_02045 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HF685_10540 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HF685_15820 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D HF685_06555 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:phao02010] D HF685_12630 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D HF685_12635 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HF685_05150 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HF685_05160 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HF685_05155 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HF685_03550 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HF685_03555 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D HF685_03560 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D HF685_03565 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HF685_05880 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_05885 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_14985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HF685_14990 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D HF685_14995 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D HF685_01330 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D HF685_01335 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HF685_00115 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C D HF685_12650 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D HF685_08440 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D HF685_08445 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D HF685_10255 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HF685_13965 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HF685_10795 cell division protein K09811 ftsX; cell division transport system permease protein D HF685_10790 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HF685_07140 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter C 02060 Phosphotransferase system (PTS) [PATH:phao02060] D HF685_03205 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HF685_03200 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HF685_10530 PTS transporter subunit EIIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:phao03070] D HF685_14820 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D HF685_14815 hypothetical protein K02452 gspC; general secretion pathway protein C D HF685_14830 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D HF685_14835 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D HF685_12170 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H D HF685_12175 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D HF685_00075 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D HF685_00080 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D HF685_14840 hypothetical protein K02461 gspL; general secretion pathway protein L D HF685_14845 type II secretion system protein M K02462 gspM; general secretion pathway protein M D HF685_15645 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HF685_15650 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HF685_13100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HF685_01310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HF685_07895 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HF685_15640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HF685_11480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HF685_01420 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HF685_02620 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HF685_11445 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D HF685_02600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HF685_06915 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HF685_06910 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D HF685_06905 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:phao02020] D HF685_03545 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HF685_03575 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D HF685_08320 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D HF685_03550 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HF685_15065 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D HF685_00750 flagellin FliC K02406 fliC; flagellin D HF685_00740 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D HF685_00640 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D HF685_00705 hypothetical protein K02556 motA; chemotaxis protein MotA D HF685_10075 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D HF685_09220 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HF685_03185 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D HF685_03180 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D HF685_05035 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D HF685_12725 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR D HF685_14345 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D HF685_14340 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D HF685_14330 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D HF685_14335 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D HF685_13285 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D HF685_06290 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D HF685_06295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D HF685_06985 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HF685_06990 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D HF685_07000 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D HF685_06615 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HF685_07005 type II secretion system F family protein K12510 tadB; tight adherence protein B D HF685_07010 type II secretion system F family protein K12511 tadC; tight adherence protein C D HF685_15240 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D HF685_12510 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D HF685_01985 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D HF685_01990 sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D HF685_12505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HF685_01995 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HF685_02000 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10250 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D HF685_10305 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D HF685_15960 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D HF685_02725 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT D HF685_04025 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D HF685_09065 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D HF685_15570 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D HF685_15565 response regulator transcription factor K14987 fixJ; two-component system, LuxR family, response regulator FixJ D HF685_00845 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_12755 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_00755 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D HF685_01320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HF685_04305 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HF685_00970 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase D HF685_14280 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D HF685_14285 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D HF685_03420 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HF685_03415 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HF685_03410 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D HF685_07830 hypothetical protein K08738 CYC; cytochrome c D HF685_09610 c-type cytochrome K08738 CYC; cytochrome c D HF685_09835 cytochrome c family protein K08738 CYC; cytochrome c D HF685_15205 cytochrome c family protein K08738 CYC; cytochrome c D HF685_15515 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D HF685_15520 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D HF685_15525 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D HF685_03290 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D HF685_10725 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D HF685_11130 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D HF685_11145 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HF685_11150 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D HF685_00720 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:phao04148] D HF685_02440 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D HF685_03420 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:phao02024] D HF685_02005 RNA chaperone Hfq K03666 hfq; host factor-I protein D HF685_01285 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HF685_01275 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HF685_14565 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HF685_00970 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase D HF685_05920 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_06065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_15465 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_01320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HF685_04305 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HF685_10085 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D HF685_07395 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HF685_10925 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HF685_15195 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D HF685_05880 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_05885 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_14985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HF685_14990 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D HF685_11480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HF685_13100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HF685_01310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HF685_07895 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HF685_15640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HF685_01420 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HF685_02620 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HF685_11445 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D HF685_02600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:phao02030] D HF685_00770 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HF685_00800 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D HF685_00805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HF685_00640 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D HF685_00705 hypothetical protein K02556 motA; chemotaxis protein MotA D HF685_00635 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:phao02040] D HF685_00760 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D HF685_00765 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D HF685_00770 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HF685_00795 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D HF685_00800 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D HF685_00805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HF685_00810 FliO/MopB family protein K02418 fliO; flagellar protein FliO/FliZ D HF685_00815 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HF685_00820 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HF685_00825 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D HF685_00735 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HF685_00830 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HF685_00715 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D HF685_00695 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HF685_00690 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HF685_00685 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HF685_00680 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D HF685_00670 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D HF685_00665 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D HF685_00660 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D HF685_00650 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D HF685_00645 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D HF685_00750 flagellin FliC K02406 fliC; flagellin D HF685_00835 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D HF685_00840 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D HF685_00640 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D HF685_00705 hypothetical protein K02556 motA; chemotaxis protein MotA D HF685_00635 OmpA family protein K02557 motB; chemotaxis protein MotB D HF685_00720 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D HF685_01715 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D HF685_00845 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_12755 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_10250 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D HF685_00755 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D HF685_00740 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:phao04980] D HF685_14945 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D HF685_02325 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D HF685_07520 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HF685_07515 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:phao01501] D HF685_00425 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HF685_14135 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HF685_06930 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HF685_13285 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D HF685_05880 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_05885 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_14985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HF685_14990 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D HF685_05945 hypothetical protein K02172 blaR1; bla regulator protein blaR1 D HF685_05950 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HF685_03140 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D HF685_07490 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D HF685_02220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_12910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_02225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_14400 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_15195 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D HF685_04590 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_10485 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_03080 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HF685_06810 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HF685_12350 bla; subclass B3 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:phao01502] D HF685_06765 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HF685_02300 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HF685_06800 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HF685_06795 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HF685_06780 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:phao01503] D HF685_04595 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HF685_15065 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D HF685_02220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_12910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_02225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_14400 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:phao01000] C 01001 Protein kinases [BR:phao01001] D HF685_06380 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HF685_14905 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HF685_10735 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D HF685_03280 AAA family ATPase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D HF685_03545 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HF685_03185 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D HF685_01985 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D HF685_01995 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HF685_15960 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D HF685_15570 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D HF685_14280 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:phao01009] D HF685_02510 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HF685_02840 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:phao01002] D HF685_12405 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D HF685_03910 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HF685_06980 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D HF685_08680 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HF685_00325 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HF685_04660 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HF685_11630 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D HF685_03500 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HF685_03245 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HF685_09895 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D HF685_15590 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D HF685_08825 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D HF685_08165 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D HF685_05185 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D HF685_02525 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D HF685_15180 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D HF685_11900 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D HF685_07630 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D HF685_14675 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HF685_15815 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HF685_06645 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HF685_12420 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HF685_15785 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D HF685_11465 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HF685_08145 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D HF685_12520 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HF685_13935 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HF685_07465 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HF685_12370 M48 family metalloprotease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D HF685_00020 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D HF685_05945 hypothetical protein K02172 blaR1; bla regulator protein blaR1 D HF685_02730 M67 family metallopeptidase K20110 JAMM1; desampylase [EC:3.4.19.15] D HF685_15065 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D HF685_13840 S8 family peptidase K01342 aprE; subtilisin [EC:3.4.21.62] D HF685_07835 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D HF685_13930 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D HF685_02055 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HF685_02755 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HF685_02760 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HF685_03120 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HF685_01250 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HF685_02375 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HF685_14690 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HF685_00955 alpha/beta hydrolase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D HF685_11550 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HF685_09960 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D HF685_11850 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D HF685_08900 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D HF685_03635 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D HF685_13720 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D HF685_05055 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_06060 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HF685_04920 TldD/PmbA family protein K03592 pmbA; PmbA protein D HF685_07210 tldD; metalloprotease TldD K03568 tldD; TldD protein D HF685_15070 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC C 01003 Glycosyltransferases [BR:phao01003] D HF685_02745 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D HF685_04590 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_10485 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:phao01005] D HF685_13050 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D HF685_11100 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:phao01011] D HF685_11390 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HF685_06770 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HF685_06775 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HF685_11855 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HF685_06790 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HF685_06805 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HF685_06765 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HF685_02300 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HF685_02405 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HF685_11850 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D HF685_06795 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HF685_06780 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HF685_11645 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HF685_11440 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D HF685_04590 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_10485 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HF685_03080 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HF685_06810 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HF685_02055 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HF685_02745 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D HF685_15590 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D HF685_15940 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HF685_11455 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D HF685_02065 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D HF685_02900 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D HF685_02060 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HF685_04595 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:phao01004] D HF685_02925 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HF685_09080 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HF685_02905 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HF685_02915 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_04265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05410 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_05605 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_07095 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09530 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_09545 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_12140 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HF685_00035 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HF685_09765 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HF685_11585 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D HF685_04675 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D HF685_14010 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D HF685_13665 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D HF685_14855 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D HF685_11190 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HF685_05920 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_06065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_15465 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_02100 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D HF685_05110 long-chain-acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D HF685_13180 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D HF685_00940 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D HF685_09085 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HF685_02400 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HF685_10805 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:phao01008] D HF685_06370 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-] D HF685_10395 MBL fold metallo-hydrolase K05555 actIV; cyclase [EC:4.-.-.-] D HF685_08055 type III polyketide synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase D HF685_08050 hypothetical protein K16168 bpsB; methyltransferase D HF685_02125 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D HF685_08985 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:phao01006] D HF685_08535 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D HF685_15720 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HF685_01820 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D HF685_04910 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D HF685_02845 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HF685_05800 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D HF685_14720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:phao01007] D HF685_12560 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D HF685_01240 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HF685_01680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HF685_11435 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HF685_06940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HF685_02040 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HF685_10460 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HF685_15915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HF685_11315 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HF685_03000 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HF685_02995 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HF685_14620 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HF685_02290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HF685_06135 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HF685_15975 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HF685_10860 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HF685_10855 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HF685_06150 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HF685_08315 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D HF685_10815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HF685_02410 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D HF685_08405 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HF685_03480 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HF685_15685 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HF685_02260 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_14530 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HF685_06200 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D HF685_09810 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:phao00199] C 00194 Photosynthesis proteins [BR:phao00194] D HF685_06605 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HF685_06600 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HF685_06595 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HF685_06590 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HF685_06585 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HF685_00525 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HF685_00530 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HF685_00520 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HF685_00515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HF685_00510 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:phao03000] D HF685_07075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_08030 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_06580 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D HF685_00560 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D HF685_07655 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D HF685_03595 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D HF685_13145 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D HF685_06185 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D HF685_14090 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HF685_13550 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D HF685_14055 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D HF685_12010 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D HF685_15200 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D HF685_05345 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D HF685_04980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HF685_12245 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D HF685_14420 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D HF685_07755 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D HF685_03685 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HF685_10085 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D HF685_01320 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HF685_04305 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HF685_14310 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D HF685_04195 DUF2083 domain-containing protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D HF685_05950 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HF685_01190 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HF685_00845 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_12755 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_12990 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HF685_06120 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D HF685_00985 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HF685_06680 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D HF685_01575 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D HF685_10625 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HF685_12855 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D HF685_06480 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D HF685_02640 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D HF685_02660 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D HF685_08120 PspC domain-containing protein K03973 pspC; phage shock protein C D HF685_11660 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D HF685_15120 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D HF685_02515 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D HF685_14605 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D HF685_00165 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D HF685_06825 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:phao03021] D HF685_07845 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HF685_12980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HF685_12970 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HF685_07480 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HF685_01715 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D HF685_14195 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HF685_15850 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HF685_10250 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D HF685_00740 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D HF685_04410 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HF685_01610 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HF685_13095 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HF685_14605 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D HF685_01750 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D HF685_10575 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:phao03019] D HF685_07650 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D HF685_04600 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HF685_02380 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HF685_01200 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HF685_02285 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HF685_05050 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D HF685_05820 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HF685_07145 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HF685_04365 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HF685_10575 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D HF685_06415 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HF685_09920 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HF685_02005 RNA chaperone Hfq K03666 hfq; host factor-I protein D HF685_15890 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HF685_08810 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D HF685_00270 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D HF685_03195 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:phao03011] D HF685_05860 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HF685_16005 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HF685_07965 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HF685_00180 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HF685_07910 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HF685_02950 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HF685_08015 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HF685_07925 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HF685_10065 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HF685_08000 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HF685_07850 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HF685_08020 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HF685_07855 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HF685_07930 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HF685_04370 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HF685_02595 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HF685_07950 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HF685_02955 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HF685_07975 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HF685_09235 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HF685_13215 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HF685_13080 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HF685_07980 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HF685_07995 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HF685_07990 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HF685_07935 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HF685_07920 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HF685_02960 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HF685_13060 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HF685_13085 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HF685_13055 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HF685_10070 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HF685_07945 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HF685_07900 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HF685_07960 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HF685_07840 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HF685_07915 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HF685_02565 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HF685_10865 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HF685_12800 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HF685_07970 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HF685_07985 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HF685_07940 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HF685_12795 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HF685_13260 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HF685_07955 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HF685_07905 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HF685_00040 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HF685_09090 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HF685_10300 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HF685_11495 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HF685_10870 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HF685_10180 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HF685_03030 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D HF685_13710 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HF685_13690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HF685_13705 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:phao03009] D HF685_02380 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HF685_07650 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D HF685_02385 GTPase Era K03595 era; GTPase D HF685_08375 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D HF685_14605 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D HF685_04410 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HF685_01610 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HF685_13095 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HF685_15795 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HF685_00260 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HF685_12375 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HF685_00410 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D HF685_05805 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HF685_10615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HF685_06820 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HF685_06535 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HF685_09175 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HF685_12605 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HF685_11540 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D HF685_14755 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D HF685_04455 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HF685_02460 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D HF685_00415 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HF685_15115 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D HF685_02735 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HF685_05210 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D HF685_03675 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D HF685_07870 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D HF685_02590 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D HF685_14655 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D HF685_04290 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D HF685_04960 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D HF685_04600 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D HF685_02805 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HF685_05820 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HF685_08605 ribosome biogenesis GTPase Der K03977 engA; GTPase D HF685_02010 hflX; GTPase HflX K03665 hflX; GTPase D HF685_12900 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HF685_13230 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HF685_04395 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D HF685_04415 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D HF685_11535 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D HF685_03705 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D HF685_10535 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D HF685_03040 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:phao03016] D HF685_09670 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D HF685_05895 ribonuclease T K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D HF685_01240 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HF685_02290 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HF685_10460 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HF685_02040 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HF685_06940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HF685_15915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HF685_15975 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HF685_06135 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HF685_14620 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HF685_11315 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HF685_10860 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HF685_10855 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HF685_01680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HF685_11435 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HF685_05675 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HF685_12780 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D HF685_03240 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HF685_04375 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HF685_03150 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_03155 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_12900 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HF685_02845 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HF685_10605 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D HF685_10610 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HF685_04955 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D HF685_02715 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D HF685_06485 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D HF685_10270 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D HF685_15900 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D HF685_12560 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D HF685_03000 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HF685_02995 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HF685_01980 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D HF685_03695 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HF685_02615 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D HF685_00170 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D HF685_01830 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HF685_02570 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HF685_06045 RNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D HF685_03425 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D HF685_03210 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D HF685_09725 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HF685_11260 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D HF685_11335 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D HF685_08520 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HF685_03460 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HF685_03455 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HF685_15040 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HF685_13870 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D HF685_08505 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HF685_07460 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HF685_01370 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HF685_02285 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HF685_04365 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HF685_02580 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:phao03012] D HF685_04400 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HF685_06140 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HF685_04285 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D HF685_16010 elongation factor Ts K02357 tsf; elongation factor Ts D HF685_08005 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HF685_08010 fusA; elongation factor G K02355 fusA; elongation factor G D HF685_11320 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HF685_11325 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HF685_03035 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HF685_07040 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HF685_01100 efp; elongation factor P K02356 efp; elongation factor P D HF685_04545 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D HF685_04030 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:phao03110] D HF685_15435 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D HF685_07265 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HF685_02750 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HF685_06415 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HF685_09920 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HF685_06410 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HF685_03470 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D HF685_06475 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D HF685_15575 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D HF685_01325 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D HF685_12845 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D HF685_09925 co-chaperone GroES K04078 groES; chaperonin GroES D HF685_15065 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D HF685_07465 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HF685_00515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HF685_11445 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D HF685_06420 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D HF685_13840 S8 family peptidase K01342 aprE; subtilisin [EC:3.4.21.62] D HF685_01290 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D HF685_13220 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D HF685_13225 hypothetical protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D HF685_12450 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D HF685_14325 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D HF685_15805 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D HF685_01395 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D HF685_15305 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D HF685_06270 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D HF685_05960 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D HF685_00135 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:phao04131] D HF685_15830 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HF685_07650 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D HF685_10290 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_01075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HF685_12445 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:phao03032] D HF685_06960 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HF685_07075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_08030 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_03115 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HF685_12590 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D HF685_05865 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D HF685_09220 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HF685_03995 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HF685_01720 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HF685_02095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_07405 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_11880 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14425 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_01345 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HF685_04475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HF685_15820 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D HF685_10470 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HF685_02045 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HF685_10540 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HF685_03130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HF685_04115 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HF685_09860 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HF685_04320 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HF685_01845 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HF685_08745 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HF685_08820 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HF685_00570 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HF685_02390 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:phao03036] D HF685_07075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_08030 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_02380 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_03115 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HF685_12590 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D HF685_05865 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D HF685_09220 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HF685_00585 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D HF685_02005 RNA chaperone Hfq K03666 hfq; host factor-I protein D HF685_04980 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HF685_07745 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D HF685_06925 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D HF685_06920 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D HF685_06755 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D HF685_10790 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HF685_06810 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HF685_07380 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HF685_06760 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D HF685_06785 cell division protein FtsW K03588 ftsW; cell division protein FtsW D HF685_10795 cell division protein K09811 ftsX; cell division transport system permease protein D HF685_06750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HF685_01060 cell division protein ZapA K09888 zapA; cell division protein ZapA D HF685_10025 cell division protein ZapE K06916 zapE; cell division protein ZapE D HF685_04595 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HF685_02220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_12910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_03065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HF685_03070 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D HF685_03075 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D HF685_03085 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D HF685_10345 AAA family ATPase K03496 parA; chromosome partitioning protein D HF685_10620 ParA family protein K03496 parA; chromosome partitioning protein D HF685_02830 ParA family protein K03496 parA; chromosome partitioning protein D HF685_10625 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HF685_08820 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HF685_00570 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HF685_10610 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HF685_10615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HF685_01830 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HF685_06510 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D HF685_06310 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D HF685_15080 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HF685_11475 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:phao03400] D HF685_00300 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D HF685_04755 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_07720 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HF685_09325 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HF685_05775 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] D HF685_06285 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HF685_09275 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HF685_06580 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D HF685_15025 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D HF685_00220 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_02500 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_14235 DUF4130 domain-containing protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HF685_12620 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D HF685_08770 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D HF685_09240 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HF685_07390 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HF685_08470 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HF685_14440 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HF685_04320 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HF685_09860 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HF685_05765 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HF685_07560 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HF685_00535 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HF685_00405 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HF685_11670 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HF685_12980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HF685_12970 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HF685_07845 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HF685_07480 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HF685_01660 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HF685_15265 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D HF685_03060 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D HF685_07305 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HF685_08540 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HF685_01345 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HF685_04475 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HF685_15820 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D HF685_10470 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HF685_02045 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HF685_10540 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HF685_03130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HF685_02095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_07405 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_11880 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14425 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_15965 recA; recombinase RecA K03553 recA; recombination protein RecA D HF685_10130 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HF685_10115 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HF685_10135 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HF685_06555 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HF685_08125 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HF685_01670 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HF685_00540 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HF685_03230 recR; recombination protein RecR K06187 recR; recombination protein RecR D HF685_04345 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D HF685_01390 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D HF685_01385 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D HF685_15060 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D HF685_01845 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HF685_08745 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HF685_02390 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HF685_03115 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HF685_12590 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D HF685_05865 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D HF685_07145 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HF685_08955 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HF685_01250 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HF685_12285 hypothetical protein K14160 imuA; protein ImuA D HF685_12280 DNA polymerase Y family protein K14161 imuB; protein ImuB D HF685_13175 regulatory protein RecX K03565 recX; regulatory protein D HF685_12570 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D HF685_07090 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HF685_07085 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:phao03029] D HF685_03415 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HF685_04400 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HF685_06140 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HF685_16010 elongation factor Ts K02357 tsf; elongation factor Ts D HF685_08005 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HF685_08010 fusA; elongation factor G K02355 fusA; elongation factor G D HF685_15250 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D HF685_12840 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D HF685_02385 GTPase Era K03595 era; GTPase D HF685_01680 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HF685_10460 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HF685_15915 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HF685_06940 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HF685_02790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HF685_02780 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HF685_02795 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HF685_02095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_07405 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_11880 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_14425 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HF685_00025 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D HF685_06415 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HF685_06475 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D HF685_09920 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HF685_09925 co-chaperone GroES K04078 groES; chaperonin GroES D HF685_06410 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HF685_03150 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_03155 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_03145 2Fe-2S iron-sulfur cluster binding domain-containing protein K22071 FDX2; ferredoxin-2, mitochondrial D HF685_05960 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D HF685_15080 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HF685_14720 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D HF685_14730 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D HF685_10075 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D HF685_11480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HF685_14275 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D HF685_14745 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D HF685_10500 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:phao02000] D HF685_07140 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D HF685_14500 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HF685_15680 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D HF685_12630 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D HF685_12635 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HF685_05150 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HF685_05160 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HF685_05155 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HF685_05145 ABC transporter K18480 linN; cholesterol transport system auxiliary component D HF685_03550 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HF685_03555 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D HF685_03560 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D HF685_03565 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HF685_05880 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_05885 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HF685_14985 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HF685_14990 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D HF685_14995 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D HF685_02240 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D HF685_02245 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D HF685_02250 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HF685_08440 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D HF685_08445 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D HF685_10255 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HF685_13965 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HF685_01330 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D HF685_01335 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HF685_00115 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C D HF685_12650 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D HF685_10795 cell division protein K09811 ftsX; cell division transport system permease protein D HF685_10790 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HF685_00580 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HF685_13860 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HF685_07245 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HF685_13865 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HF685_04685 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D HF685_04680 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HF685_11235 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D HF685_04690 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D HF685_06430 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D HF685_14575 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HF685_13570 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D HF685_14350 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D HF685_00425 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HF685_14135 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HF685_08625 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D HF685_15460 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D HF685_08965 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D HF685_04560 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D HF685_03205 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HF685_03200 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HF685_10530 PTS transporter subunit EIIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D HF685_12905 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D HF685_14640 potassium channel family protein K10716 kch; voltage-gated potassium channel D HF685_12295 ion transporter K08714 VGSC; voltage-gated sodium channel D HF685_03930 ammonium transporter K03320 amt; ammonium transporter, Amt family D HF685_07175 ammonium transporter K03320 amt; ammonium transporter, Amt family D HF685_04975 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06015 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06020 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06030 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_11470 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_11610 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_11995 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_15430 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_15970 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_06860 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D HF685_07345 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D HF685_15750 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D HF685_05730 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D HF685_07685 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D HF685_00640 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D HF685_00705 hypothetical protein K02556 motA; chemotaxis protein MotA D HF685_00635 OmpA family protein K02557 motB; chemotaxis protein MotB D HF685_14485 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D HF685_08330 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D HF685_14490 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D HF685_14495 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D HF685_07600 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D HF685_07605 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D HF685_13505 zinc transporter ZntB K16074 zntB; zinc transporter D HF685_15110 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D HF685_15935 porin family protein K16079 omp31; outer membrane immunogenic protein D HF685_03580 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D HF685_02555 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D HF685_07350 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D HF685_08880 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D HF685_04520 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D HF685_13200 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D HF685_02235 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D HF685_02140 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_03770 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_03825 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_05425 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_06895 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_11845 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_12460 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_13345 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_13540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_08950 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HF685_15195 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D HF685_03290 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D HF685_10725 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D HF685_11130 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D HF685_00025 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D HF685_08610 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB D HF685_04350 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D HF685_12485 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D HF685_13480 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D HF685_12490 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D HF685_13485 hypothetical protein K09800 tamB; translocation and assembly module TamB D HF685_10260 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA D HF685_10265 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D HF685_15810 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D HF685_10465 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D HF685_03710 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein D HF685_08115 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D HF685_02225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_14400 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_11345 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D HF685_04420 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D HF685_11200 cation acetate symporter K14393 actP; cation/acetate symporter D HF685_13135 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D HF685_13765 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D HF685_06335 sodium:proton exchanger K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D HF685_15980 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter D HF685_11440 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D HF685_06855 AEC family transporter K13936 mdcF; malonate transporter and related proteins D HF685_00150 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D HF685_12940 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D HF685_03350 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D HF685_05115 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D HF685_06785 cell division protein FtsW K03588 ftsW; cell division protein FtsW D HF685_10290 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D HF685_09885 TonB family protein K03832 tonB; periplasmic protein TonB D HF685_10915 TonB family protein K03832 tonB; periplasmic protein TonB D HF685_14480 energy transducer TonB K03832 tonB; periplasmic protein TonB D HF685_07620 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D HF685_07615 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D HF685_01625 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D HF685_14345 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D HF685_14340 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D HF685_14330 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D HF685_02220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_12910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_10735 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D HF685_03280 AAA family ATPase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D HF685_03285 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator D HF685_07415 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D HF685_07410 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D HF685_06900 entericidin K16348 ecnB; entericidin B D HF685_00130 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D HF685_04885 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:phao02044] D HF685_03270 AAA family ATPase K02450 gspA; general secretion pathway protein A D HF685_14815 hypothetical protein K02452 gspC; general secretion pathway protein C D HF685_14820 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D HF685_14830 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D HF685_14835 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D HF685_12170 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H D HF685_12175 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D HF685_00075 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D HF685_00080 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D HF685_14840 hypothetical protein K02461 gspL; general secretion pathway protein L D HF685_14845 type II secretion system protein M K02462 gspM; general secretion pathway protein M D HF685_13755 type II secretion system protein N K02463 gspN; general secretion pathway protein N D HF685_03910 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HF685_06980 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D HF685_06985 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HF685_06990 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D HF685_06995 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD D HF685_07000 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D HF685_06615 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HF685_07005 type II secretion system F family protein K12510 tadB; tight adherence protein B D HF685_07010 type II secretion system F family protein K12511 tadC; tight adherence protein C D HF685_06290 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D HF685_06295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D HF685_15275 YggT family protein K02221 yggT; YggT family protein D HF685_01245 ComEC family competence protein K02238 comEC; competence protein ComEC D HF685_00735 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HF685_00830 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HF685_00765 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D HF685_00805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HF685_00810 FliO/MopB family protein K02418 fliO; flagellar protein FliO/FliZ D HF685_00815 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HF685_00820 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HF685_00825 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D HF685_04520 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D HF685_01420 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HF685_11445 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D HF685_15645 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HF685_13100 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D HF685_15650 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HF685_01310 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HF685_07895 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HF685_02600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HF685_02620 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HF685_15640 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HF685_11480 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D HF685_06915 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D HF685_06910 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D HF685_06905 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins C 02022 Two-component system [BR:phao02022] D HF685_03545 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HF685_03575 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D HF685_03185 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D HF685_03180 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D HF685_03380 response regulator K02483 K02483; two-component system, OmpR family, response regulator D HF685_15340 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D HF685_15700 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D HF685_12725 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR D HF685_13255 response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator D HF685_01985 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D HF685_01990 sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D HF685_01995 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HF685_02000 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D HF685_04180 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator D HF685_10305 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D HF685_15960 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D HF685_04025 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D HF685_09065 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D HF685_15570 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D HF685_15565 response regulator transcription factor K14987 fixJ; two-component system, LuxR family, response regulator FixJ D HF685_00755 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D HF685_14280 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D HF685_14285 response regulator transcription factor K15012 regA; two-component system, response regulator RegA C 02035 Bacterial motility proteins [BR:phao02035] D HF685_00810 FliO/MopB family protein K02418 fliO; flagellar protein FliO/FliZ D HF685_00815 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HF685_00820 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HF685_00825 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D HF685_00735 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HF685_00830 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HF685_00770 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HF685_00800 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D HF685_00805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HF685_00765 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D HF685_00660 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D HF685_00715 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D HF685_00665 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D HF685_00795 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D HF685_00760 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D HF685_00695 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HF685_00690 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HF685_00685 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HF685_00670 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D HF685_00680 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D HF685_00650 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D HF685_00645 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D HF685_00750 flagellin FliC K02406 fliC; flagellin D HF685_00835 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D HF685_00840 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D HF685_00740 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D HF685_00640 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D HF685_00705 hypothetical protein K02556 motA; chemotaxis protein MotA D HF685_00635 OmpA family protein K02557 motB; chemotaxis protein MotB D HF685_00845 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_12755 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D HF685_00755 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D HF685_00720 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D HF685_03910 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HF685_06290 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D HF685_06295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D HF685_06980 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D HF685_06985 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HF685_06990 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D HF685_06995 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD D HF685_07000 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D HF685_06615 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:phao04812] D HF685_03065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HF685_06750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HF685_06755 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D HF685_10345 AAA family ATPase K03496 parA; chromosome partitioning protein D HF685_10620 ParA family protein K03496 parA; chromosome partitioning protein D HF685_02830 ParA family protein K03496 parA; chromosome partitioning protein D HF685_10625 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:phao04147] D HF685_01085 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HF685_01075 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HF685_01080 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HF685_06645 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HF685_12420 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HF685_15365 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D HF685_09920 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HF685_06415 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HF685_02370 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HF685_14805 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D HF685_00255 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HF685_08005 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HF685_07650 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D HF685_05675 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HF685_04690 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D HF685_05920 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_06065 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_15465 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D HF685_03915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_05580 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_09165 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_10690 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12205 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_12240 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_14015 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HF685_02525 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D HF685_02510 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HF685_07890 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HF685_13040 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HF685_09205 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HF685_04425 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HF685_05085 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D HF685_03405 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D HF685_12505 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HF685_12825 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HF685_12265 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D HF685_12645 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D HF685_09805 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HF685_12390 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HF685_02265 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HF685_11275 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D HF685_01295 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HF685_12445 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:phao02048] D HF685_11755 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HF685_11750 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HF685_11745 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HF685_04110 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D HF685_07075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_08030 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HF685_02315 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D HF685_02585 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE D HF685_10835 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D HF685_10830 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D HF685_02660 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D HF685_08120 PspC domain-containing protein K03973 pspC; phage shock protein C D HF685_02655 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D HF685_08360 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D HF685_08355 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA D HF685_11425 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D HF685_07555 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D HF685_11420 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D HF685_02580 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D HF685_06750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HF685_03065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HF685_08820 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HF685_00570 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HF685_01240 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HF685_01665 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D HF685_03150 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HF685_03155 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:phao04090] D HF685_02525 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:phao01504] D HF685_12040 aac(3)-I; AAC(3)-I family aminoglycoside N-acetyltransferase K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60] D HF685_08625 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D HF685_15460 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D HF685_08815 chloramphenicol phosphotransferase K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-] D HF685_05945 hypothetical protein K02172 blaR1; bla regulator protein blaR1 D HF685_05950 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HF685_03140 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D HF685_07490 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D HF685_02220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_12910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HF685_02225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_14400 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D HF685_15195 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D HF685_15200 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:phao00536] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:phao00537] D HF685_06645 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HF685_12420 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:phao03100] D HF685_05835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HF685_13700 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HF685_12060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_02980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_06255 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_03355 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HF685_01640 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HF685_01045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HF685_13470 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HF685_14535 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HF685_04625 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HF685_14435 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HF685_15310 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HF685_03395 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HF685_00085 tRNA-His K14226 tRNA-His; tRNA His D HF685_13695 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HF685_05870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_10775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_11655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_02770 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_03905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HF685_15400 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HF685_03090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HF685_13715 tRNA-Met K14230 tRNA-Met; tRNA Met D HF685_01880 tRNA-Ile K14230 tRNA-Met; tRNA Met D HF685_03330 tRNA-Met K14230 tRNA-Met; tRNA Met D HF685_05660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HF685_15635 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HF685_01885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HF685_00590 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_02070 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_10220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_10940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HF685_03760 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HF685_09680 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HF685_13950 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HF685_13110 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HF685_12600 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HF685_09215 tRNA-Val K14237 tRNA-Val; tRNA Val D HF685_09070 tRNA-Val K14237 tRNA-Val; tRNA Val D HF685_13690 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HF685_13705 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HF685_13710 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HF685_03135 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D HF685_02715 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D HF685_15765 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HF685_13415 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D HF685_13420 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D HF685_05635 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11] D HF685_08780 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D HF685_12515 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1] D HF685_02195 aldehyde dehydrogenase family protein K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D HF685_05040 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D HF685_15210 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D HF685_09600 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D HF685_13205 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D HF685_09605 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D HF685_15090 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D HF685_02430 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D HF685_02495 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D HF685_09410 NAD(P)-binding protein K18208 RNLS; renalase [EC:1.6.3.5] D HF685_03745 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D HF685_05975 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D HF685_09525 NADH oxidase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D HF685_15445 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D HF685_12145 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D HF685_12955 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D HF685_06145 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D HF685_12920 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D HF685_10480 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D HF685_13805 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D HF685_06175 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HF685_08490 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HF685_12950 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D HF685_13020 carotenoid oxygenase family protein K21822 E1.13.11.82; 8'-apo-carotenoid 13,14-cleaving dioxygenase [EC:1.13.11.82] D HF685_02185 TauD/TfdA family dioxygenase K21728 sdpA; (S)-dichlorprop dioxygenase (2-oxoglutarate) [EC:1.14.11.43] D HF685_00350 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58] D HF685_02970 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D HF685_05875 hydrolase K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235] D HF685_04505 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D HF685_13195 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D HF685_08180 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D HF685_00310 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D HF685_04435 methyltransferase domain-containing protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D HF685_04750 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D HF685_12770 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D HF685_03690 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D HF685_04825 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D HF685_03940 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D HF685_13150 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D HF685_04075 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D HF685_15230 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HF685_10560 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D HF685_08495 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D HF685_03960 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D HF685_11820 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D HF685_07595 YbgC/FadM family acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HF685_08260 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HF685_12470 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HF685_13925 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HF685_13940 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HF685_15055 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HF685_00935 HAD-IB family hydrolase K15781 serB-plsC; putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase [EC:3.1.3.3 2.3.1.51] D HF685_15415 low molecular weight phosphotyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D HF685_12575 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D HF685_12160 MBL fold metallo-hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D HF685_02035 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HF685_02720 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HF685_03225 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HF685_07260 acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D HF685_06265 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D HF685_09580 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D HF685_02435 carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127] D HF685_02465 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HF685_13560 alginate lyase family protein K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D HF685_10655 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D HF685_05380 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D HF685_15235 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D HF685_14005 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D HF685_15540 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D HF685_05640 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit C 99982 Energy metabolism D HF685_12850 ferredoxin family protein K05524 fdxA; ferredoxin D HF685_11280 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D HF685_13885 hypothetical protein K06203 cysZ; CysZ protein D HF685_10440 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HF685_00465 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D HF685_09250 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D HF685_11400 hypothetical protein K12942 abgT; aminobenzoyl-glutamate transport protein D HF685_07420 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D HF685_01960 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D HF685_03885 DoxX family protein K15977 K15977; putative oxidoreductase D HF685_09945 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D HF685_04785 cold-shock protein K03704 cspA; cold shock protein D HF685_13170 cold shock domain-containing protein K03704 cspA; cold shock protein D HF685_10280 cold-shock protein K03704 cspA; cold shock protein D HF685_07180 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D HF685_15595 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D HF685_02415 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D HF685_08080 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D HF685_02765 trigger factor K03545 tig; trigger factor D HF685_09820 iron reductase K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D HF685_15950 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D HF685_11510 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D HF685_08710 peptidase K07395 K07395; putative proteasome-type protease C 99976 Replication and repair D HF685_14115 HNH endonuclease K07454 K07454; putative restriction endonuclease D HF685_14295 restriction endonuclease K07454 K07454; putative restriction endonuclease D HF685_00485 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D HF685_00865 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D HF685_03220 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D HF685_06530 hypothetical protein K07460 yraN; putative endonuclease D HF685_02350 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D HF685_05910 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D HF685_06515 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D HF685_10120 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D HF685_02395 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D HF685_03730 replication-associated recombination protein A K07478 ycaJ; putative ATPase D HF685_10950 IS5 family transposase K07481 K07481; transposase, IS5 family D HF685_10975 IS5 family transposase K07481 K07481; transposase, IS5 family D HF685_11000 IS5 family transposase K07481 K07481; transposase, IS5 family D HF685_11135 IS5 family transposase K07481 K07481; transposase, IS5 family D HF685_00615 IS110 family transposase K07486 K07486; transposase D HF685_05235 IS3 family transposase K07497 K07497; putative transposase D HF685_09440 IS3 family transposase K07497 K07497; putative transposase D HF685_11800 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D HF685_02650 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D HF685_03125 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HF685_04800 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D HF685_07795 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D HF685_13775 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D HF685_04160 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D HF685_01925 putP; sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D HF685_05095 sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D HF685_13830 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D HF685_08935 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HF685_06710 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D HF685_05125 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D HF685_13335 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D HF685_02625 ispZ; septation protein IspZ K06190 ispZ; intracellular septation protein D HF685_00045 biotin-dependent carboxyltransferase family protein K06350 kipA; antagonist of KipI D HF685_11545 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D HF685_04695 typA; translational GTPase TypA K06207 typA; GTP-binding protein D HF685_09430 hypothetical protein K07167 chrR; putative transcriptional regulator D HF685_03700 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D HF685_04005 glycoside hydrolase family 25 K07273 acm; lysozyme D HF685_08860 DUF560 domain-containing protein K07280 K07280; outer membrane protein D HF685_00240 NfeD family protein K07340 ybbJ; inner membrane protein D HF685_05745 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA D HF685_04225 cell envelope integrity protein CreD K06143 creD; inner membrane protein D HF685_00125 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D HF685_00140 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D HF685_00145 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D HF685_15155 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D HF685_11120 P-loop NTPase K13661 gumC; GumC protein C 99994 Others D HF685_03570 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D HF685_08590 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D HF685_00555 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D HF685_06690 copper resistance protein B K07233 pcoB; copper resistance protein B D HF685_14355 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D HF685_06345 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D HF685_04480 peptidoglycan-binding protein K03791 K03791; putative chitinase D HF685_07100 hypothetical protein K07001 K07001; NTE family protein D HF685_07185 patatin K07001 K07001; NTE family protein D HF685_08925 cyclic nucleotide-binding domain-containing protein K07001 K07001; NTE family protein D HF685_10095 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D HF685_10175 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D HF685_14810 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D HF685_11225 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D HF685_11245 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD D HF685_00295 metal-dependent hydrolase K07038 K07038; inner membrane protein D HF685_08640 metal-dependent hydrolase K07038 K07038; inner membrane protein D HF685_09760 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D HF685_13495 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D HF685_02695 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D HF685_10425 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D HF685_15745 LemA family protein K03744 lemA; LemA protein D HF685_05955 DUF202 domain-containing protein K00389 yidH; putative membrane protein D HF685_11575 PH domain-containing protein K08981 K08981; putative membrane protein D HF685_08035 DUF1304 domain-containing protein K08987 K08987; putative membrane protein D HF685_08045 DUF1304 domain-containing protein K08987 K08987; putative membrane protein D HF685_15735 hypothetical protein K08988 K08988; putative membrane protein D HF685_06165 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D HF685_15740 methanol dehydrogenase K06872 K06872; uncharacterized protein D HF685_08460 alpha/beta hydrolase K06889 K06889; uncharacterized protein D HF685_12135 hypothetical protein K06889 K06889; uncharacterized protein D HF685_15420 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D HF685_12890 ATP-binding protein K06923 K06923; uncharacterized protein D HF685_15085 CoA-binding protein K06929 K06929; uncharacterized protein D HF685_10430 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein D HF685_07865 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D HF685_12760 VOC family protein K06991 K06991; uncharacterized protein D HF685_10360 VOC family protein K06996 K06996; uncharacterized protein D HF685_11620 VOC family protein K06996 K06996; uncharacterized protein D HF685_03160 alpha/beta hydrolase K07018 K07018; uncharacterized protein D HF685_12740 metal-dependent hydrolase K07044 K07044; uncharacterized protein D HF685_12785 metal-dependent hydrolase K07044 K07044; uncharacterized protein D HF685_05375 amidohydrolase family protein K07045 K07045; uncharacterized protein D HF685_04220 zinc metalloprotease K07054 K07054; uncharacterized protein D HF685_05305 hypothetical protein K07068 K07068; uncharacterized protein D HF685_13375 DNA-binding protein K07068 K07068; uncharacterized protein D HF685_01950 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D HF685_01425 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D HF685_08225 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D HF685_13640 TSUP family transporter K07090 K07090; uncharacterized protein D HF685_06040 DUF839 domain-containing protein K07093 K07093; uncharacterized protein D HF685_15375 YeeE/YedE family protein K07112 K07112; uncharacterized protein D HF685_15380 YeeE/YedE family protein K07112 K07112; uncharacterized protein D HF685_02835 hypothetical protein K07126 K07126; uncharacterized protein D HF685_10335 SEL1-like repeat protein K07126 K07126; uncharacterized protein D HF685_09100 MAPEG family protein K07136 K07136; uncharacterized protein D HF685_09290 hypothetical protein K07136 K07136; uncharacterized protein D HF685_09875 MAPEG family protein K07136 K07136; uncharacterized protein D HF685_08585 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D HF685_14140 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D HF685_15300 ATP-dependent protease K07157 K07157; uncharacterized protein D HF685_11485 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D HF685_13165 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D HF685_01725 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D HF685_10495 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D HF685_11580 PH domain-containing protein K09167 K09167; uncharacterized protein D HF685_05815 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D HF685_02345 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D HF685_13130 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D HF685_15295 Trm112 family protein K09791 K09791; uncharacterized protein D HF685_06090 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D HF685_15690 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D HF685_01855 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D HF685_05665 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D HF685_10330 N-acetyltransferase K09919 K09919; uncharacterized protein D HF685_05080 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein D HF685_15955 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D HF685_09935 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D HF685_06965 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein D HF685_10165 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D HF685_03010 TraB/GumN family protein K09973 K09973; uncharacterized protein D HF685_03015 TraB/GumN family protein K09973 K09973; uncharacterized protein D HF685_06360 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein D HF685_00505 YdbL family protein K09978 K09978; uncharacterized protein D HF685_01605 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D HF685_09880 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D HF685_04130 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein D HF685_05715 hypothetical protein K09985 K09985; uncharacterized protein D HF685_08800 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D HF685_15450 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D HF685_01700 VWA domain-containing protein K09989 K09989; uncharacterized protein D HF685_08190 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein D HF685_13460 ThuA domain-containing protein K09992 K09992; uncharacterized protein D HF685_04405 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024