+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Phytophthora infestans

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D PITG_07308 rRNA 2'-O-methyltransferase fibrillarin, putative K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D PITG_05534 nucleolar protein Nop56 K14564 NOP56; nucleolar protein 56 D PITG_09432 nucleolar protein NOP5 K14565 NOP58; nucleolar protein 58 D PITG_19178 13 kDa ribonucleoprotein-associated protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D PITG_06263 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PITG_15652 H/ACA ribonucleoprotein complex subunit, putative K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D PITG_19608 ribosomal protein L7Ae/L30e/S12e/Gadd4, putative K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D PITG_18717 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D PITG_07327 H/ACA ribonucleoprotein complex non-core subunit NAF1, putative K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D PITG_22453 hypothetical protein K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D PITG_06262 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D PITG_05630 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D PITG_02593 U3 small nucleolar ribonucleoprotein, putative K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D PITG_08200 neuroguidin-like protein K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D PITG_09222 hypothetical protein K14545 RRP7; ribosomal RNA-processing protein 7 D PITG_00052 periodic tryptophan protein 2 K14558 PWP2; periodic tryptophan protein 2 D PITG_14730 nucleolar protein, putative K14766 NOP14; nucleolar protein 14 D PITG_09439 hypothetical protein K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D PITG_06667 U3 small nucleolar RNA-associated protein, putative K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D PITG_00597 hypothetical protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D PITG_20593 hypothetical protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D PITG_00036 U3 small nucleolar RNA-associated protein 6 K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D PITG_02725 hypothetical protein K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D PITG_00748 hypothetical protein K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D PITG_17365 U3 small nucleolar RNA-associated protein, putative K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D PITG_09374 hypothetical protein K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D PITG_03818 U3 small nucleolar RNA-associated protein, putative K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D PITG_01019 U3 small nucleolar RNA-associated protein, putative K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D PITG_03955 U3 small nucleolar RNA-associated protein, putative K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D PITG_12871 hypothetical protein K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D PITG_02536 U3 small nucleolar RNA-associated protein 18 K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D PITG_11124 nucleolar complex protein 4 K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D PITG_02808 U3 small nucleolar RNA-associated protein, putative K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D PITG_12931 hypothetical protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D PITG_12932 hypothetical protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D PITG_08338 nucleolar protein 6, putative K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D PITG_12292 rRNA-processing protein, putative K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D PITG_12305 rRNA-processing protein FCF1 K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D PITG_11796 digestive organ expansion factor K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D PITG_04334 hypothetical protein K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D PITG_00499 ATP-dependent RNA helicase dbp4, putative K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D PITG_19163 ATP-dependent RNA helicase, putative K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D PITG_02839 DEAD/DEAH box RNA helicase, putative K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D PITG_00109 DEAD/DEAH box RNA helicase, putative K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D PITG_07311 DEAD/DEAH box RNA helicase, putative K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D PITG_09943 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D PITG_13017 ATP-dependent RNA helicase, putative K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D PITG_06048 eukaryotic initiation factor 4A-III, putative K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D PITG_02887 ribosome biogenesis protein BMS1 K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D PITG_10316 RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D PITG_14566 lariat debranching enzyme B K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D PITG_00194 casein kinase II subunit, putative K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D PITG_02745 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta D PITG_06679 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D PITG_04845 hypothetical protein K14782 AATF; protein AATF/BFR2 D PITG_01920 ubiquitin-specific protease, putative K14784 CMS1; protein CMS1 D PITG_00142 ribosome biogenesis protein NEP1, putative K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D PITG_02093 pre-rRNA-processing protein ESF2 K14785 ESF2; ESF2/ABP1 family protein D PITG_05226 hypothetical protein K14786 KRI1; protein KRI1 D PITG_02450 ribosomal RNA assembly protein mis3 K06961 KRR1; ribosomal RNA assembly protein D PITG_12162 RNA-binding protein, putative K14787 MRD1; multiple RNA-binding domain-containing protein 1 D PITG_19671 N-acetyltransferase 10 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D PITG_02629 nucleolin, putative K11294 NCL; nucleolin D PITG_07296 nucleolar protein 10, putative K14788 NOL10; ribosome biogenesis protein ENP2 D PITG_02889 hypothetical protein K14789 NOP6; nucleolar protein 6 D PITG_17272 hypothetical protein K14790 NOP9; nucleolar protein 9 D PITG_19741 hypothetical protein K11135 PINX1; Pin2-interacting protein X1 D PITG_08709 hypothetical protein K11135 PINX1; Pin2-interacting protein X1 D PITG_07199 hypothetical protein K11135 PINX1; Pin2-interacting protein X1 D PITG_00648 periodic tryptophan protein, putative K14791 PWP1; periodic tryptophan protein 1 D PITG_05445 RNA 3'-terminal phosphate cyclase, putative K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D PITG_16107 rRNA biogenesis protein rrp5 K14792 RRP5; rRNA biogenesis protein RRP5 D PITG_03876 U3 small nucleolar RNA-interacting protein, putative K14793 RRP9; ribosomal RNA-processing protein 9 D PITG_18014 hypothetical protein K14794 RRP12; ribosomal RNA-processing protein 12 D PITG_11088 hypothetical protein K14795 RRP36; ribosomal RNA-processing protein 36 D PITG_01283 glycoside hydrolase, putative K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D PITG_04584 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PITG_16813 Rio kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D PITG_03672 RIO kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D PITG_08045 dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D PITG_13615 dimethyladenosine transferase, putative K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D PITG_10945 hypothetical protein K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D PITG_07993 methyltransferase WBSCR22 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D PITG_00410 bystin K14797 ENP1; essential nuclear protein 1 D PITG_08235 hypothetical protein K14798 LTV1; protein LTV1 D PITG_13300 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D PITG_01680 RNA-binding protein PNO1-like protein K11884 PNO1; RNA-binding protein PNO1 D PITG_18718 GTP-binding nuclear protein spi1 K07936 RAN; GTP-binding nuclear protein Ran D PITG_12465 adenylate kinase, putative K18532 AK6; adenylate kinase [EC:2.7.4.3] D PITG_03156 pre-rRNA-processing protein TSR1 K14799 TSR1; pre-rRNA-processing protein TSR1 D PITG_16375 hypothetical protein K14800 TSR2; pre-rRNA-processing protein TSR2 D PITG_20274 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D PITG_01226 hypothetical protein K14801 TSR4; pre-rRNA-processing protein TSR4 D PITG_10508 programmed cell death protein 2, putative K14801 TSR4; pre-rRNA-processing protein TSR4 D PITG_00787 CRM1 C terminal Exportin 1-like protein K14290 XPO1; exportin-1 D PITG_05434 importin subunit beta, putative K14293 KPNB1; importin subunit beta-1 D PITG_21176 transportin-like protein K18752 TNPO1; transportin-1 D PITG_03555 importin-like protein K20221 IPO4; importin-4 D PITG_03112 importin-like protein K20222 IPO5; importin-5 D PITG_15026 importin-like protein K20222 IPO5; importin-5 D PITG_06410 hypothetical protein K20223 IPO7; importin-7 D PITG_00695 importin, putative K20224 IPO9; importin-9 C Other pre-40S particles D PITG_03291 phospholipid-transporting ATPase, putative K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_07943 phospholipid-transporting ATPase, putative K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_15139 phospholipid-transporting ATPase, putative K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_07455 P-type ATPase (P-ATPase) Superfamily K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_11085 phospholipid-transporting ATPase, putative K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_11159 phospholipid-transporting ATPase, putative K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_00481 P-type ATPase (P-ATPase) Superfamily K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_01955 P-type ATPase (P-ATPase) Superfamily K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_13395 P-type ATPase (P-ATPase) Superfamily K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_03740 P-type ATPase (P-ATPase) Superfamily K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D PITG_19551 hypothetical protein K03245 EIF3J; translation initiation factor 3 subunit J D PITG_00559 protein phosphatase 2C, putative K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D PITG_19281 ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D PITG_02664 ATP-dependent RNA helicase DBP2, putative K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D PITG_19163 ATP-dependent RNA helicase, putative K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D PITG_06827 DEAD/DEAH box RNA helicase, putative K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D PITG_12165 DEAD/DEAH box RNA helicase, putative K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D PITG_08026 DEAD/DEAH box RNA helicase, putative K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D PITG_02478 DEAD/DEAH box RNA helicase, putative K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D PITG_03157 DEAD/DEAH box RNA helicase, putative K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D PITG_06981 DEAD/DEAH box RNA helicase, putative K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D PITG_03675 DEAD/DEAH box RNA helicase, putative K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D PITG_00227 DEAD/DEAH box RNA helicase, putative K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D PITG_01427 DEAD/DEAH box RNA helicase, putative K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7] D PITG_09042 DEAD/DEAH box RNA helicase, putative K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D PITG_13380 guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein D PITG_17404 guanine nucleotide-binding protein K14538 NUG1; nuclear GTP-binding protein D PITG_16792 nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D PITG_11198 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D PITG_12107 hypothetical protein K06943 NOG1; nucleolar GTP-binding protein D PITG_18421 large subunit GTPase 1 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D PITG_05058 elongation factor Tu GTP-binding domain-containing protein K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] D PITG_17205 elongation factor G, putative K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] D PITG_16556 elongation factor Tu GTP-binding domain-containing protein, putative K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D PITG_04887 hypothetical protein K14570 REX1; RNA exonuclease [EC:3.1.-.-] D PITG_08447 exonuclease, putative K14570 REX1; RNA exonuclease [EC:3.1.-.-] D PITG_00032 exonuclease, putative K14570 REX1; RNA exonuclease [EC:3.1.-.-] D PITG_17674 5'-3' exoribonuclease 1, putative K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D RNase MRP E PITG_10163 hypothetical protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E PITG_17724 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E PITG_07174 ribonuclease P protein subunit p30, putative K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E PITG_21600 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D PITG_04832 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D PITG_01498 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D PITG_03771 hypothetical protein K09506 DNAJA5; DnaJ homolog subfamily A member 5 D PITG_03802 eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D PITG_11913 heat shock cognate 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_03546 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_16528 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_03068 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_11244 heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_11247 heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_11249 heat shock 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_11252 heat shock protein 70 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_15370 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_21580 hsp70-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D PITG_20688 mRNA turnover protein 4 K14815 MRT4; mRNA turnover protein 4 D PITG_22541 60S ribosomal export protein NMD3, putative K07562 NMD3; 60S ribosomal export protein NMD3 D PITG_16054 60S ribosomal export protein nmd3, putative K07562 NMD3; 60S ribosomal export protein NMD3 D PITG_00035 60S ribosomal export protein NMD3, putative K07562 NMD3; 60S ribosomal export protein NMD3 D PITG_18718 GTP-binding nuclear protein spi1 K07936 RAN; GTP-binding nuclear protein Ran D PITG_02244 hypothetical protein K14816 REI1; pre-60S factor REI1 D PITG_00401 ribosome maturation protein SBDS, putative K14574 SDO1; ribosome maturation protein SDO1 D PITG_01076 ATPase AFG2 protein K14575 AFG2; AAA family ATPase D PITG_06700 cell division cycle protein 48 K14575 AFG2; AAA family ATPase D PITG_00787 CRM1 C terminal Exportin 1-like protein K14290 XPO1; exportin-1 D PITG_05434 importin subunit beta, putative K14293 KPNB1; importin subunit beta-1 D PITG_21176 transportin-like protein K18752 TNPO1; transportin-1 D PITG_03555 importin-like protein K20221 IPO4; importin-4 D PITG_03112 importin-like protein K20222 IPO5; importin-5 D PITG_15026 importin-like protein K20222 IPO5; importin-5 D PITG_06410 hypothetical protein K20223 IPO7; importin-7 D PITG_00695 importin, putative K20224 IPO9; importin-9 D PITG_01409 hypothetical protein K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] D PITG_05777 hypothetical protein K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D PITG_11057 hypothetical protein K14827 IPI1; pre-rRNA-processing protein IPI1 D PITG_10200 WD domain-containing protein, putative K14829 IPI3; pre-rRNA-processing protein IPI3 D PITG_20038 WD domain-containing protein, putative K14829 IPI3; pre-rRNA-processing protein IPI3 D PITG_08121 WD domain-containing protein, putative K14829 IPI3; pre-rRNA-processing protein IPI3 D PITG_02240 hypothetical protein K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D PITG_02238 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D PITG_12277 hypothetical protein K24970 TCF25; transcription factor 25 D PITG_09950 hypothetical protein K24971 NEMF; nuclear export mediator factor NEMF D PITG_19871 cell division control protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D PITG_12120 NPL4-like protein K14015 NPLOC4; nuclear protein localization protein 4 D PITG_10857 ubiquitin fusion degradation protein, putative K14016 UFD1; ubiquitin fusion degradation protein 1 D PITG_14396 ubiquitin fusion degradation protein, putative K14016 UFD1; ubiquitin fusion degradation protein 1 D PITG_05448 hypothetical protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D PITG_07017 hypothetical protein K14820 BRX1; ribosome biogenesis protein BRX1 D PITG_08688 hypothetical protein K14822 CGR1; rRNA-processing protein CGR1 D PITG_14248 rRNA-processing protein EBP2, putative K14823 EBP2; rRNA-processing protein EBP2 D PITG_03452 hypothetical protein K14824 ERB1; ribosome biogenesis protein ERB1 D PITG_03696 hypothetical protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D PITG_07099 hypothetical protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D PITG_13268 p21-activated protein kinase-interacting protein, putative K14830 MAK11; protein MAK11 D PITG_02193 hypothetical protein K14831 MAK16; protein MAK16 D PITG_18246 hypothetical protein K14832 MAK21; ribosome biogenesis protein MAK21 D PITG_10819 midasin-like protein K14572 MDN1; midasin D PITG_14912 60S ribosome subunit biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D PITG_13131 nucleolar complex protein, putative K14833 NOC2; nucleolar complex protein 2 D PITG_12225 nucleolar complex protein 3 K14834 NOC3; nucleolar complex protein 3 D PITG_02752 ribosomal RNA methyltransferase nop2-like protein K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D PITG_08708 hypothetical protein K14573 NOP4; nucleolar protein 4 D PITG_06868 RNA-binding protein, putative K14837 NOP12; nucleolar protein 12 D PITG_20818 hypothetical protein K14837 NOP12; nucleolar protein 12 D PITG_06991 FHA domain-interacting nucleolar phosphoprotein, putative K14838 NOP15; nucleolar protein 15 D PITG_16938 hypothetical protein K14839 NOP16; nucleolar protein 16 D PITG_05409 hypothetical protein K14840 NOP53; nucleolar protein 53 D PITG_08441 hypothetical protein K14841 NSA1; ribosome biogenesis protein NSA1 D PITG_01207 ribosome biogenesis protein NSA2 K14842 NSA2; ribosome biogenesis protein NSA2 D PITG_13016 pescadillo-like protein K14843 PES1; pescadillo D PITG_03308 hypothetical protein K14844 PUF6; pumilio homology domain family member 6 D PITG_00648 periodic tryptophan protein, putative K14791 PWP1; periodic tryptophan protein 1 D PITG_07250 hypothetical protein K14845 RAI1; RAT1-interacting protein D PITG_15871 nucleolar protein, putative K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D PITG_03548 nucleolar protein, putative K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D PITG_01725 ribosome biogenesis ATPase RIX7 K14571 RIX7; ribosome biogenesis ATPase D PITG_11635 ribosome biogenesis ATPase RIX7 K14571 RIX7; ribosome biogenesis ATPase D PITG_12678 ribosome production factor 1, putative K14846 RPF1; ribosome production factor 1 D PITG_00165 hypothetical protein K14847 RPF2; ribosome production factor 2 D PITG_10015 glutamate-rich WD repeat-containing protein K14848 RRB1; ribosome assembly protein RRB1 D PITG_10725 ribosomal RNA processing protein 1 K14849 RRP1; ribosomal RNA-processing protein 1 D PITG_05796 ribosomal RNA-processing protein, putative K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D PITG_18014 hypothetical protein K14794 RRP12; ribosomal RNA-processing protein 12 D PITG_19876 hypothetical protein K14851 RRP17; ribosomal RNA-processing protein 17 D PITG_04384 ribosome biogenesis regulatory protein K14852 RRS1; regulator of ribosome biosynthesis D PITG_04722 notchless family protein K14855 RSA4; ribosome assembly protein 4 D PITG_18755 SDA1 family protein K14856 SDA1; protein SDA1 D PITG_00663 rRNA methyltransferase, putative K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D PITG_01030 SWI4 1, Peter Pan-like protein suppressor K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D PITG_02780 hypothetical protein K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D PITG_08996 hypothetical protein K14863 WDR12; ribosome biogenesis protein D PITG_19775 hypothetical protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C PITG_10018 BCCIP family protein K15262 BCP1; protein BCP1 C PITG_00705 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein C PITG_05843 hypothetical protein K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C PITG_09243 rRNA methyltransferase, putative K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C PITG_06609 hypothetical protein K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C PITG_09942 DEAD/DEAH box RNA helicase, putative K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C PITG_04426 DNA polymerase alpha-associated DNA helicase A, putative K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C PITG_01066 hypothetical protein K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C PITG_13806 hypothetical protein K03595 era; GTPase C PITG_13014 proliferation-associated protein, metalloprotease family M24X, putative K26736 PA2G4; ERBB-3 binding protein C PITG_07318 GTPase, putative K19828 MTG1; mitochondrial GTPase 1 C PITG_03292 GTPase K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D PITG_05534 nucleolar protein Nop56 K14564 NOP56; nucleolar protein 56 D PITG_03477 60S ribosomal protein L7a-2 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D PITG_06263 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D PITG_18717 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D PITG_09405 ribosomal RNA large subunit methyltransferase J, putative K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors B rRNA helicases B GTPases C PITG_13806 hypothetical protein K03595 era; GTPase C PITG_03292 GTPase K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C PITG_04428 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C PITG_17258 hypothetical protein K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024