+D GENES KO
#
KEGG Orthology (KO) - Pirellula sp. SH-Sr6A
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pir00010]
D VN12_22195 glcK_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_23870 glcK_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_13670 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VN12_20940 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D VN12_15075 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VN12_02745 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VN12_01750 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VN12_19440 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VN12_07940 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VN12_21015 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VN12_00505 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VN12_00215 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VN12_21480 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D VN12_16415 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VN12_16420 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_21820 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D VN12_21825 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D VN12_07440 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VN12_06560 ahr; Aldehyde reductase Ahr K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D VN12_00145 outer membrane biogenesis protein BamB K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VN12_14635 mro; Aldose 1-epimerase precursor K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VN12_20020 yihX; Alpha-D-glucose-1-phosphate phosphatase YihX K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_10095 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D VN12_10370 yeaD; Putative glucose-6-phosphate 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VN12_07120 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D VN12_22025 bifunctional RNase H/acid phosphatase
C 00020 Citrate cycle (TCA cycle) [PATH:pir00020]
D VN12_11960 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D VN12_09225 acoA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VN12_14970 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VN12_13380 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VN12_12810 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_21820 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D VN12_21825 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D VN12_25925 sucD_2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VN12_25920 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VN12_08370 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VN12_08375 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VN12_08365 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VN12_00340 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VN12_15715 mqo2; putative malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D VN12_07620 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D VN12_07120 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D VN12_16415 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VN12_16420 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pir00030]
D VN12_13670 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VN12_09710 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VN12_15415 pgl_4; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D VN12_00250 pgl_1; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D VN12_07060 pgl_2; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D VN12_09105 pgl_3; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D VN12_15550 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VN12_07435 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VN12_00335 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VN12_23185 tal_2; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VN12_07645 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D VN12_13465 hxlA; 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D VN12_08660 xpkA_2; Xylulose-5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D VN12_10025 xpkA_3; Xylulose-5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D VN12_11185 deoC1; Deoxyribose-phosphate aldolase 1 K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_17460 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VN12_25690 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VN12_03790 ycdF; Glucose 1-dehydrogenase 2 K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D VN12_23100 gdhI; Glucose 1-dehydrogenase 1 K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D VN12_08675 yjmD; putative zinc-type alcohol dehydrogenase-like protein YjmD K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D VN12_25465 gdhB_2; Quinoprotein glucose dehydrogenase B precursor K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D VN12_03780 gnl_1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_17095 gnl_2; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_22385 gnl_4; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_06660 kdgK_1; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VN12_06715 kdgK_2; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VN12_17225 ttuD; Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VN12_15075 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VN12_20940 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pir00040]
D VN12_16750 hypothetical protein K01728 pel; pectate lyase [EC:4.2.2.2]
D VN12_16995 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D VN12_25585 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D VN12_11885 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VN12_19885 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VN12_00535 Xylose isomerase-like TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VN12_21680 ulaE; L-ribulose-5-phosphate 3-epimerase UlaE K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VN12_22920 Xylose isomerase-like TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VN12_07435 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VN12_09025 xylB; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D VN12_18535 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VN12_01880 rhaB; Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D VN12_16395 D-arabitol-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D VN12_17255 gutB; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D VN12_09460 ilvD_2; Dihydroxy-acid dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82]
D VN12_22430 Fumarylacetoacetate (FAA) hydrolase family protein K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D VN12_22435 aldH; NADP-dependent fatty aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D VN12_07445 mtnB_1; Methylthioribulose-1-phosphate dehydratase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D VN12_27015 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pir00051]
D VN12_07555 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VN12_09135 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VN12_04805 glmM; Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VN12_17240 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VN12_06875 gmd_1; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VN12_25685 gmd_2; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VN12_19205 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D VN12_07445 mtnB_1; Methylthioribulose-1-phosphate dehydratase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D VN12_27015 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D VN12_27060 Amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D VN12_01445 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D VN12_01880 rhaB; Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D VN12_20940 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D VN12_16395 D-arabitol-phosphate dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D VN12_17255 gutB; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D VN12_18535 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D VN12_15075 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VN12_02745 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VN12_08635 sacC; Levanase precursor K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D VN12_07645 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:pir00052]
D VN12_14635 mro; Aldose 1-epimerase precursor K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VN12_13410 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VN12_09925 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VN12_19885 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_22195 glcK_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_23870 glcK_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_20940 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:pir00053]
D VN12_11885 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VN12_03780 gnl_1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_17095 gnl_2; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_22385 gnl_4; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_07765 chmD; dTDP-4-oxo-6-deoxy-D-allose reductase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D VN12_09125 lnpD; UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VN12_00535 Xylose isomerase-like TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VN12_21680 ulaE; L-ribulose-5-phosphate 3-epimerase UlaE K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VN12_22920 Xylose isomerase-like TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_22430 Fumarylacetoacetate (FAA) hydrolase family protein K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D VN12_22435 aldH; NADP-dependent fatty aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:pir00500]
D VN12_23145 mfpsA_3; Mannosylfructose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D VN12_23140 ams; Amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D VN12_19885 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VN12_03270 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D VN12_11020 glgC_1; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VN12_20915 glgC_2; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VN12_13415 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VN12_09180 glgB_1; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VN12_13870 glgB_2; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VN12_10035 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VN12_25885 Carbohydrate phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VN12_01005 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VN12_18300 amyA; Alpha-amylase 1 K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VN12_10125 glgX_1; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D VN12_17710 glgX_2; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_22195 glcK_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_23870 glcK_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_13670 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VN12_07555 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:pir00620]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VN12_21820 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D VN12_21825 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D VN12_16415 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VN12_16420 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_06560 ahr; Aldehyde reductase Ahr K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D VN12_00145 outer membrane biogenesis protein BamB K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D VN12_07475 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_10030 pduW; putative propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_13515 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_07490 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D VN12_00215 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VN12_18700 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VN12_15575 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VN12_15570 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VN12_07425 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VN12_01930 yccX; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_07440 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VN12_17720 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VN12_17090 putative FAD-linked oxidoreductase K18930 dld; D-lactate dehydrogenase
D VN12_07620 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VN12_15715 mqo2; putative malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D VN12_00340 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VN12_10145 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VN12_07120 pckG; Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D VN12_07235 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D VN12_21480 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D VN12_00795 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VN12_10380 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VN12_12675 gloB_2; Hydroxyacylglutathione hydrolase
D VN12_20420 putative metallo-hydrolase
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pir00630]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VN12_11960 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D VN12_09225 acoA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VN12_16165 paaZ; Bifunctional protein PaaZ K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D VN12_22230 gph; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VN12_12865 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_17660 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_00035 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VN12_12530 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VN12_04630 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_04625 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17110 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17225 ttuD; Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VN12_25690 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VN12_22090 dmsB; Anaerobic dimethyl sulfoxide reductase chain B K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VN12_21810 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pir00640]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VN12_07475 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_10030 pduW; putative propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_13515 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_07490 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_18700 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VN12_15575 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VN12_15570 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VN12_07425 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_25920 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VN12_25925 sucD_2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VN12_09225 acoA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VN12_07440 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:pir00650]
D VN12_10395 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VN12_13235 echA8; putative enoyl-CoA hydratase echA8 K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D VN12_16165 paaZ; Bifunctional protein PaaZ K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D VN12_08370 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VN12_08375 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VN12_08365 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_00185 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VN12_21820 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D VN12_21825 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D VN12_02765 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VN12_22135 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pir00660]
D VN12_02765 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VN12_22135 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VN12_25920 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VN12_25925 sucD_2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VN12_07410 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VN12_07415 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VN12_03605 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pir00562]
D VN12_09470 suhB_1; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VN12_23700 suhB_2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VN12_01655 iolI; Inosose isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D VN12_02745 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VN12_18200 ycjS; putative oxidoreductase YcjS
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pir00190]
D VN12_07790 nqo7; NADH-quinone oxidoreductase subunit 7 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D VN12_07795 nqo6; NADH-quinone oxidoreductase subunit 6 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D VN12_07800 nqo5; NADH-quinone oxidoreductase subunit 5 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D VN12_07805 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D VN12_07810 nqo2; NADH-quinone oxidoreductase subunit 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D VN12_07815 nqo1; NADH-quinone oxidoreductase chain 1 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D VN12_07820 nqo3; NADH-quinone oxidoreductase chain 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D VN12_07825 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D VN12_07830 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D VN12_07835 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D VN12_07840 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D VN12_07845 nuoL_2; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D VN12_26950 nuoL_3; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D VN12_07850 nuoM_1; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D VN12_26955 nuoM_2; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D VN12_07855 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D VN12_00785 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VN12_08370 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VN12_08375 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VN12_08365 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VN12_12125 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VN12_17895 hypothetical protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D VN12_03655 caaA_1; Cytochrome c oxidase polypeptide I+III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D VN12_17890 cyoC; Cytochrome bo(3) ubiquinol oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D VN12_17885 caaA_2; Cytochrome c oxidase polypeptide I+III K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D VN12_17880 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D VN12_12130 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D VN12_06835 hypothetical protein K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D VN12_06825 ccoP2; Cbb3-type cytochrome c oxidase subunit CcoP2 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VN12_11510 gdhB_1; Quinoprotein glucose dehydrogenase B precursor K08738 CYC; cytochrome c
D VN12_21530 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VN12_21520 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VN12_21525 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VN12_21535 atpH; ATP synthase subunit delta, sodium ion specific K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VN12_21515 atpC; ATP synthase epsilon chain, sodium ion specific K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VN12_21550 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VN12_21540 atpF; ATP synthase subunit b, sodium ion specific K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VN12_21545 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VN12_17310 Cobalt-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VN12_10195 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VN12_10090 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pir00710]
D VN12_19440 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VN12_01750 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VN12_15075 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VN12_00335 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VN12_07645 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D VN12_02745 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VN12_07435 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VN12_23185 tal_2; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VN12_10145 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VN12_21480 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pir00720]
D VN12_21480 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D VN12_10145 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VN12_07620 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VN12_00340 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VN12_08370 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VN12_08375 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VN12_08365 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VN12_25925 sucD_2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VN12_25920 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VN12_21820 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D VN12_21825 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D VN12_14970 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VN12_09225 acoA; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VN12_18700 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VN12_15575 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VN12_15570 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VN12_07425 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VN12_21640 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VN12_22560 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VN12_07490 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D VN12_07475 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_10030 pduW; putative propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_13515 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pir00680]
D VN12_22090 dmsB; Anaerobic dimethyl sulfoxide reductase chain B K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VN12_00035 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VN12_17225 ttuD; Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VN12_00505 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VN12_10145 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VN12_15075 fda; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VN12_20940 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D VN12_13465 hxlA; 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D VN12_21685 GXGXG motif protein K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D VN12_00235 fhcA; Formyltransferase/hydrolase complex Fhc subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12]
D VN12_04740 fhcC; Formyltransferase/hydrolase complex Fhc subunit C K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12]
D VN12_16340 fhcD_1; Formyltransferase/hydrolase complex subunit D K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
D VN12_25910 fhcD_2; Formyltransferase/hydrolase complex subunit D K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101]
D VN12_11975 mch; Methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D VN12_15785 mtdA; Bifunctional protein MdtA K00300 mtdA; methylenetetrahydrofolate/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-]
D VN12_03550 fae_1; Formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D VN12_18235 fae_2; Formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D VN12_07475 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_10030 pduW; putative propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_13515 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VN12_07940 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VN12_21015 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VN12_14890 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VN12_14895 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VN12_27095 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VN12_12075 hypothetical protein K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153]
D VN12_07525 hypothetical protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131]
D VN12_22025 bifunctional RNase H/acid phosphatase
C 00910 Nitrogen metabolism [PATH:pir00910]
D VN12_22070 nrtA; Nitrate transport protein NrtA precursor K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VN12_22075 cmpB; Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein
D VN12_22080 cmpD_2; Bicarbonate transport ATP-binding protein CmpD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VN12_22100 sir_2; Sulfite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D VN12_07740 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VN12_25420 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D VN12_12865 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_17660 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_12940 gltB_2; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VN12_12935 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VN12_02780 bicA; Bicarbonate transporter BicA K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pir00920]
D VN12_13920 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VN12_13925 cysT; Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VN12_13930 cysW_1; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VN12_13935 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VN12_20355 cysNC; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D VN12_20350 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VN12_07400 cysC; Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VN12_18125 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D VN12_23915 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VN12_22105 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VN12_21645 sir_1; Sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D VN12_20430 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D VN12_20400 Cytochrome c K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D VN12_04850 rhdA; Putative thiosulfate sulfurtransferase precursor K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VN12_20440 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VN12_13330 cysK1_1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VN12_15860 cysK1_2; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VN12_12685 mdeA; Methionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VN12_17065 metC_1; Cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VN12_16870 hypothetical protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pir00061]
D VN12_18700 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VN12_15575 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VN12_15570 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VN12_07425 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VN12_01895 acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_06990 acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_10650 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_14080 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_18110 acpP_3; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_07050 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VN12_08605 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VN12_09045 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VN12_07045 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_10645 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_14070 fabF_3; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_18105 fabF_4; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_20435 fabF_5; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_05330 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07000 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07240 fabG_5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_08545 fabG_6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_09805 fabG_7; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_11205 fabZ_1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_12970 fabZ_2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_14075 fabZ_3; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_21855 fabZ_4; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_07860 fabI_1; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_12275 fabI_2; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_10450 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pir00071]
D VN12_10450 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D VN12_02445 aas; Bifunctional protein Aas K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:pir00074]
D VN12_06675 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VN12_01895 acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_06990 acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_10650 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_14080 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_18110 acpP_3; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_07050 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pir00561]
D VN12_17225 ttuD; Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_18665 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VN12_17760 plsC_3; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VN12_01070 dagK_1; Diacylglycerol kinase
D VN12_03230 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase
C 00564 Glycerophospholipid metabolism [PATH:pir00564]
D VN12_18660 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VN12_17760 plsC_3; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VN12_12890 glpQ1_1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VN12_25125 glpQ1_2; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VN12_02445 aas; Bifunctional protein Aas K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D VN12_03295 cdsA_1; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VN12_21655 cdsA_2; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VN12_12195 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VN12_15615 cls_2; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D VN12_00055 cls_1; Cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D VN12_13265 hypothetical protein K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D VN12_25470 ubiE_4; Demethylmenaquinone methyltransferase K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
D VN12_10045 egsA; Glycerol-1-phosphate dehydrogenase [NAD(P)+] K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D VN12_01070 dagK_1; Diacylglycerol kinase
D VN12_03230 plsC_1; 1-acyl-sn-glycerol-3-phosphate acyltransferase
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pir00600]
D VN12_20920 hypothetical protein K28560 bcerS; bacterial ceramide synthase [EC:2.3.1.-]
D VN12_09960 atsA_12; Arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1]
D VN12_00245 atsA_1; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_04985 atsA_9; Arylsulfatase precursor K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_13655 atsA_19; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_14750 atsA_20; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_17235 atsA_22; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_19390 atsA_23; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_04930 nedA_1; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D VN12_21630 nedA_2; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D VN12_00025 tal_1; dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(P)(+))
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pir00230]
D VN12_05030 nudF_1; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VN12_10780 nudF_2; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_17460 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VN12_07610 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VN12_07340 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VN12_03345 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VN12_18640 purL_2; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D VN12_13440 purL_1; Phosphoribosylformylglycinamidine synthase 2 K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D VN12_16985 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VN12_23925 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VN12_23930 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D VN12_22915 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VN12_22275 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VN12_11415 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VN12_23850 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VN12_10485 surE_1; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VN12_11430 surE_2; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VN12_08970 punA_1; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VN12_12905 punA_2; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VN12_23035 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VN12_15030 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VN12_13365 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VN12_13750 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VN12_15900 ndx1; Diadenosine hexaphosphate hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D VN12_23270 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VN12_01685 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VN12_05550 nrdZ; Ribonucleoside-diphosphate reductase NrdZ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VN12_07255 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VN12_05540 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VN12_20580 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D VN12_12250 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VN12_21250 CYTH domain protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D VN12_10675 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VN12_13800 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D VN12_20245 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VN12_20355 cysNC; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D VN12_07400 cysC; Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VN12_20350 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VN12_11915 cyaA; Adenylate cyclase 1
C 00240 Pyrimidine metabolism [PATH:pir00240]
D VN12_11310 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VN12_01310 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VN12_02385 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VN12_03815 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VN12_11175 pyrD; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D VN12_12690 pyrK; Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D VN12_14185 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VN12_01580 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VN12_21725 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VN12_13365 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VN12_14910 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VN12_15900 ndx1; Diadenosine hexaphosphate hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D VN12_18505 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VN12_17755 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VN12_08380 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D VN12_10485 surE_1; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VN12_11430 surE_2; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VN12_25490 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VN12_13800 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D VN12_11850 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VN12_03010 tadA_1; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VN12_13225 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D VN12_05550 nrdZ; Ribonucleoside-diphosphate reductase NrdZ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VN12_07255 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VN12_05540 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VN12_01530 tmk_1; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VN12_18590 tmk_2; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VN12_17610 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VN12_17290 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VN12_20125 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VN12_19670 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pir00250]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_12955 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VN12_11335 iaaA; Isoaspartyl peptidase precursor K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VN12_06960 asnB_1; Asparagine synthetase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VN12_12740 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VN12_15645 asnB_2; Asparagine synthetase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VN12_02415 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VN12_10440 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VN12_02770 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VN12_10675 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VN12_22275 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VN12_02385 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_00185 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VN12_12940 gltB_2; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VN12_12935 gltB_1; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VN12_07740 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VN12_25420 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D VN12_07115 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VN12_12865 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_17660 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_11310 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VN12_01310 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VN12_18640 purL_2; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D VN12_23955 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VN12_07610 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pir00260]
D VN12_00780 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VN12_17000 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VN12_21010 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D VN12_07680 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VN12_16745 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VN12_00035 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VN12_17225 ttuD; Putative hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D VN12_07940 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VN12_21015 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VN12_14890 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VN12_14895 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VN12_27095 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VN12_17670 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VN12_14175 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D VN12_15485 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D VN12_12530 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VN12_04630 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_04625 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17110 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17070 metC_2; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VN12_09445 sdaA_1; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VN12_09450 sdaA_2; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VN12_02930 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VN12_18265 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VN12_18260 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VN12_22025 bifunctional RNase H/acid phosphatase
C 00270 Cysteine and methionine metabolism [PATH:pir00270]
D VN12_20440 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VN12_13330 cysK1_1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VN12_15860 cysK1_2; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VN12_17070 metC_2; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VN12_00740 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VN12_03120 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VN12_23075 speH; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D VN12_23945 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D VN12_13635 mtnA; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D VN12_08945 mtnB_2; Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D VN12_10040 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D VN12_05025 Phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D VN12_23810 mtnD_2; Acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D VN12_03740 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VN12_00780 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VN12_17000 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VN12_21010 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D VN12_12685 mdeA; Methionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VN12_17065 metC_1; Cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VN12_05070 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_19340 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_04850 rhdA; Putative thiosulfate sulfurtransferase precursor K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VN12_07440 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VN12_20515 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VN12_09445 sdaA_1; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VN12_09450 sdaA_2; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VN12_14890 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VN12_14895 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pir00280]
D VN12_05070 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_19340 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_22485 caiD; Carnitinyl-CoA dehydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VN12_12900 garR; 2-hydroxy-3-oxopropionate reductase
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pir00290]
D VN12_02930 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VN12_07410 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VN12_07415 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VN12_03605 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VN12_02765 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VN12_22135 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VN12_22130 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VN12_00975 ilvD_1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VN12_05070 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_19340 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_00795 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D VN12_10380 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pir00300]
D VN12_21010 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D VN12_00780 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VN12_17000 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VN12_19160 dapA_4; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VN12_06760 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VN12_03105 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VN12_11605 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D VN12_25615 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VN12_22940 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
C 00310 Lysine degradation [PATH:pir00310]
D VN12_12810 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_00185 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pir00220]
D VN12_03810 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VN12_10440 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VN12_02770 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VN12_18640 purL_2; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D VN12_12865 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_17660 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_11310 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VN12_01310 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VN12_07740 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VN12_25420 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_09345 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VN12_13260 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D VN12_03805 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VN12_09525 argC_1; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VN12_17985 argC_2; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VN12_11015 argE_1; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D VN12_11060 argE_2; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pir00330]
D VN12_21395 crnA; Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D VN12_03010 tadA_1; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VN12_18425 adiA; Biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D VN12_18080 speA; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VN12_27005 aguA; Putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D VN12_27000 N-carbamoyl-D-amino acid hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D VN12_23945 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D VN12_23075 speH; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_15485 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D VN12_09640 astA; Arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VN12_08290 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D VN12_08285 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VN12_22565 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VN12_07115 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VN12_13355 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VN12_23875 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_04975 hpbD; 4-hydroxyproline betaine 2-epimerase K21624 c3lhypd; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]
C 00340 Histidine metabolism [PATH:pir00340]
D VN12_17815 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VN12_17810 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D VN12_20150 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D VN12_12175 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VN12_01250 hisH1; Imidazole glycerol phosphate synthase subunit HisH 1 K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VN12_01305 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VN12_23750 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D VN12_19465 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VN12_00830 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D VN12_13080 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_15485 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:pir00350]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_19465 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VN12_15485 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D VN12_00185 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pir00360]
D VN12_15485 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D VN12_03315 Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D VN12_10395 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_19465 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VN12_11395 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VN12_01635 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VN12_27040 ndoA; Naphthalene 1,2-dioxygenase system ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:pir00380]
D VN12_12810 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_15485 puo_2; Putrescine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_01635 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pir00400]
D VN12_19425 aroH_2; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VN12_02590 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VN12_16050 aroB_1; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VN12_16930 aroB_2; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VN12_16040 aroE; Shikimate dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D VN12_18495 aroL; Shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VN12_11155 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VN12_21580 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VN12_07305 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VN12_09455 pabA; Aminodeoxychorismate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VN12_16045 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VN12_13200 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D VN12_01325 trpF_1; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D VN12_15425 trpF_2; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D VN12_00770 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D VN12_18265 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VN12_18260 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VN12_21980 pheA; Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VN12_02475 aroH_1; Chorismate mutase AroH K06208 aroH; chorismate mutase [EC:5.4.99.5]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_19465 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pir00410]
D VN12_20115 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_18645 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:pir00430]
D VN12_16325 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_19445 ywrD; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_02415 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VN12_07490 pduL; Phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D VN12_07475 ackA_1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_10030 pduW; putative propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VN12_13515 ackA_2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pir00440]
D VN12_13835 Phytanoyl-CoA dioxygenase (PhyH) K21195 phnY; 2-aminoethylphosphonate dioxygenase [EC:1.14.11.46]
D VN12_18820 phnP; Phosphoribosyl 1,2-cyclic phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pir00450]
D VN12_12685 mdeA; Methionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VN12_17065 metC_1; Cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VN12_00740 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VN12_17070 metC_2; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VN12_01430 csd_1; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D VN12_15855 sufS_1; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D VN12_27050 csd_2; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D VN12_21040 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D VN12_20355 cysNC; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D VN12_20350 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VN12_15360 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D VN12_14180 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pir00460]
D VN12_16325 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_19445 ywrD; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_11335 iaaA; Isoaspartyl peptidase precursor K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VN12_00035 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pir00470]
D VN12_18640 purL_2; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D VN12_11930 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D VN12_11925 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D VN12_03105 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VN12_25615 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VN12_26860 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D VN12_09100 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D VN12_22435 aldH; NADP-dependent fatty aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D VN12_11395 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:pir00480]
D VN12_16325 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_19445 ywrD; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_19225 apc3; Acetophenone carboxylase gamma subunit K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D VN12_09120 ybdK; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D VN12_13120 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VN12_06780 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VN12_14970 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VN12_15550 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VN12_09710 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VN12_01155 gpx1_1; Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VN12_10475 gpx1_2; Hydroperoxy fatty acid reductase gpx1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VN12_23945 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pir00520]
D VN12_03360 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VN12_04925 ce; Cellobiose 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D VN12_17245 putative uridylyltransferase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D VN12_17465 glmU; Bifunctional protein GlmU K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D VN12_06885 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VN12_18090 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VN12_03200 UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45]
D VN12_17555 nagA_1; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VN12_19345 nagA_3; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VN12_07335 nagB_1; Glucosamine-6-phosphate deaminase 1 K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VN12_07895 nagB_2; Glucosamine-6-phosphate deaminase 1 K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VN12_09380 nagB_3; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VN12_23955 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VN12_07555 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VN12_13670 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VN12_09135 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VN12_12850 UDP-glucose 4-epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D VN12_09125 lnpD; UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VN12_22195 glcK_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_23870 glcK_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_10095 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_19885 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VN12_11885 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VN12_13410 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VN12_09925 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VN12_04805 glmM; Phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VN12_17240 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VN12_07765 chmD; dTDP-4-oxo-6-deoxy-D-allose reductase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D VN12_03270 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D VN12_11020 glgC_1; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VN12_20915 glgC_2; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00541 Biosynthesis of various nucleotide sugars [PATH:pir00541]
D VN12_17245 putative uridylyltransferase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D VN12_17465 glmU; Bifunctional protein GlmU K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D VN12_03200 UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45]
D VN12_06895 wbpA_1; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D VN12_21635 afr_4; 1,5-anhydro-D-fructose reductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D VN12_18555 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VN12_10740 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VN12_18560 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VN12_14965 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VN12_17370 dapA_3; 4-hydroxy-tetrahydrodipicolinate synthase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D VN12_06885 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VN12_06965 wbpA_2; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VN12_19885 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VN12_11885 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VN12_03270 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D VN12_04505 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D VN12_04520 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VN12_17240 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VN12_06875 gmd_1; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VN12_25685 gmd_2; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VN12_04535 epsN_1; Putative pyridoxal phosphate-dependent aminotransferase EpsN K13010 per; perosamine synthetase [EC:2.6.1.102]
D VN12_19205 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D VN12_00870 yrrB_1; TPR repeat-containing protein YrrB K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pir00511]
D VN12_04930 nedA_1; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D VN12_21630 nedA_2; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis [PATH:pir00540]
D VN12_10725 lpxA_1; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VN12_25045 lpxA_2; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VN12_10720 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VN12_22405 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VN12_22400 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VN12_22020 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VN12_12845 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VN12_18075 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VN12_14455 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VN12_25565 rfaQ; Lipopolysaccharide core heptosyltransferase RfaQ K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D VN12_19090 rfaF; ADP-heptose--LPS heptosyltransferase 2 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pir00542]
D VN12_03690 tagO_1; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_13315 tagO_2; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:pir00550]
D VN12_18090 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VN12_22940 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VN12_07875 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VN12_21330 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VN12_20485 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:pir00552]
D VN12_21330 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VN12_03690 tagO_1; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_13315 tagO_2; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_07760 tagA_1; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D VN12_20530 tagA_2; Putative N-acetylmannosaminyltransferase
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D VN12_03690 tagO_1; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_13315 tagO_2; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:pir00543]
D VN12_03690 tagO_1; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_13315 tagO_2; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_20440 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pir00730]
D VN12_17205 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VN12_01890 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VN12_03860 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_18255 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_01120 hcnC; Hydrogen cyanide synthase subunit HcnC precursor K03153 thiO; glycine oxidase [EC:1.4.3.19]
D VN12_18465 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VN12_23615 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VN12_11005 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VN12_23665 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VN12_11965 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VN12_20245 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VN12_09435 phoA; Alkaline phosphatase precursor
C 00740 Riboflavin metabolism [PATH:pir00740]
D VN12_09070 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VN12_02585 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VN12_10800 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VN12_22270 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VN12_07600 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VN12_05030 nudF_1; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VN12_10780 nudF_2; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VN12_23060 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pir00750]
D VN12_23125 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D VN12_14895 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VN12_15600 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VN12_07680 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pir00760]
D VN12_12955 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VN12_19215 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VN12_09370 nadC; Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VN12_08970 punA_1; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VN12_12905 punA_2; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VN12_10485 surE_1; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VN12_11430 surE_2; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VN12_17390 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VN12_14045 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D VN12_07330 pncC; Nicotinamide-nucleotide amidohydrolase PncC K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VN12_25295 cobB; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VN12_18460 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VN12_23620 sthA; Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VN12_00185 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pir00770]
D VN12_02765 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VN12_22135 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VN12_22130 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VN12_00975 ilvD_1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VN12_05150 panB_1; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VN12_20605 panB_2; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VN12_11555 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VN12_18645 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VN12_03885 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D VN12_01700 coaBC_2; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VN12_18400 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VN12_27075 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VN12_06675 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VN12_05070 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_19340 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_20115 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pir00780]
D VN12_07045 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_10645 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_14070 fabF_3; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_18105 fabF_4; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_20435 fabF_5; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_05330 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07000 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07240 fabG_5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_08545 fabG_6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_09805 fabG_7; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_11205 fabZ_1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_12970 fabZ_2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_14075 fabZ_3; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_21855 fabZ_4; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_07860 fabI_1; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_12275 fabI_2; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_19125 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VN12_21945 bioK; L-Lysine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VN12_12065 bioD1; ATP-dependent dethiobiotin synthetase BioD 1 K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VN12_17705 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VN12_03385 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pir00785]
D VN12_04620 lipM; Octanoyltransferase LipM K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VN12_07290 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VN12_12755 lplJ; Lipoate-protein ligase LplJ K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_16415 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VN12_16420 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VN12_13380 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VN12_12810 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VN12_12530 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VN12_04630 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VN12_04625 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17110 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pir00790]
D VN12_18950 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VN12_12795 phoD; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VN12_19050 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VN12_21605 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VN12_10465 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VN12_25640 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VN12_09070 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VN12_18120 pabB; Aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VN12_03850 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VN12_22990 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VN12_11780 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VN12_23180 fabG_8; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D VN12_03395 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VN12_01735 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VN12_03400 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VN12_20990 hypothetical protein K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D VN12_14460 lysX; Alpha-aminoadipate--LysW ligase LysX K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D VN12_07955 moaA_1; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VN12_26980 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VN12_07960 moaE; Molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VN12_21315 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VN12_01035 moeA; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VN12_08910 molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D VN12_09435 phoA; Alkaline phosphatase precursor
C 00670 One carbon pool by folate [PATH:pir00670]
D VN12_10465 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VN12_21640 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VN12_15785 mtdA; Bifunctional protein MdtA K00300 mtdA; methylenetetrahydrofolate/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-]
D VN12_00035 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VN12_03345 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VN12_11415 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VN12_04630 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VN12_00740 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VN12_20125 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VN12_19670 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D VN12_21810 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VN12_22560 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VN12_17780 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D VN12_03120 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VN12_03740 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VN12_12530 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_04625 gcvH_1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17110 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VN12_17070 metC_2; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pir00860]
D VN12_13570 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_20995 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_00275 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VN12_04510 kat; 3-aminobutyryl-CoA aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VN12_10685 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VN12_03725 hemB_1; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VN12_24640 hemB_2; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VN12_21650 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VN12_11410 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VN12_03710 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D VN12_02650 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D VN12_21815 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D VN12_12730 nasF; Uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D VN12_12125 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VN12_12130 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D VN12_19855 cbiX; Sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D VN12_14845 cobL; Precorrin-6Y C(5,15)-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D VN12_12560 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D VN12_01560 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VN12_17260 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VN12_11305 hypothetical protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D VN12_17565 Ferritin-like domain protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pir00130]
D VN12_23065 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VN12_14900 4-hydroxybenzoate decarboxylase subunit C K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VN12_23060 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VN12_23055 ubiE_3; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VN12_12210 mqnA; Chorismate dehydratase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D VN12_23070 mqnE_2; Aminodeoxyfutalosine synthase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D VN12_03375 Aminodeoxyfutalosine deaminase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D VN12_00835 mqnB; Futalosine hydrolase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D VN12_12215 mqnE_1; Aminodeoxyfutalosine synthase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D VN12_00840 mqnD; 1,4-dihydroxy-6-naphtoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D VN12_11740 pnpB; p-benzoquinone reductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pir00900]
D VN12_18465 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VN12_21710 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VN12_25895 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VN12_19305 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VN12_17790 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VN12_13130 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VN12_02795 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VN12_23060 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VN12_18470 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D VN12_26985 ispB_2; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VN12_07875 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:pir00909]
D VN12_10680 Prenyltransferase and squalene oxidase repeat protein K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:pir00906]
D VN12_10470 carC; All-trans-zeta-carotene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D VN12_20065 crtP; Diapolycopene oxygenase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pir00907]
D VN12_06560 ahr; Aldehyde reductase Ahr K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VN12_00335 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products [PATH:pir01057]
D VN12_09965 gloB_1; Hydroxyacylglutathione hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
D VN12_12750 hypothetical protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00253 Tetracycline biosynthesis
D VN12_12750 hypothetical protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00523 Polyketide sugar unit biosynthesis
D VN12_04520 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D VN12_10170 cefD; Isopenicillin N epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 00332 Carbapenem biosynthesis [PATH:pir00332]
D VN12_13355 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VN12_23875 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pir00261]
D VN12_20355 cysNC; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D VN12_20350 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VN12_00780 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VN12_17000 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VN12_19160 dapA_4; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VN12_06760 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pir00521]
D VN12_22195 glcK_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_23870 glcK_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_12920 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VN12_09470 suhB_1; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VN12_23700 suhB_2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VN12_04520 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VN12_18200 ycjS; putative oxidoreductase YcjS
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D VN12_22195 glcK_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D VN12_23870 glcK_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:pir00401]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_19465 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D VN12_12750 hypothetical protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00405 Phenazine biosynthesis
D VN12_07305 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VN12_09455 pabA; Aminodeoxychorismate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VN12_16045 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VN12_07050 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VN12_05330 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07000 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07240 fabG_5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_08545 fabG_6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_09805 fabG_7; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07860 fabI_1; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_12275 fabI_2; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VN12_01895 acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_06990 acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_10650 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_14080 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D VN12_18110 acpP_3; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pir00999]
D VN12_03120 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VN12_16040 aroE; Shikimate dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pir00362]
D VN12_20455 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D VN12_09975 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VN12_10395 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation [PATH:pir00627]
D VN12_01930 yccX; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VN12_23060 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:pir00364]
D VN12_09575 clcD_1; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VN12_24975 clcD_2; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pir00625]
D VN12_11985 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VN12_00145 outer membrane biogenesis protein BamB K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pir00361]
D VN12_09575 clcD_1; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VN12_24975 clcD_2; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:pir00623]
D VN12_09575 clcD_1; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D VN12_24975 clcD_2; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:pir00633]
D VN12_05370 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D VN12_03780 gnl_1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_17095 gnl_2; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_22385 gnl_4; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
D VN12_20455 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pir03020]
D VN12_18035 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VN12_18030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VN12_10410 rpoA_1; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VN12_17800 rpoA_2; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VN12_01690 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pir03010]
D VN12_14550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VN12_12640 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VN12_12635 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VN12_17930 rpsA_1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VN12_23050 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1
D VN12_20230 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VN12_20310 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VN12_08965 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VN12_20260 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VN12_20205 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VN12_09915 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VN12_20275 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VN12_10200 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VN12_20345 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VN12_10405 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D VN12_09910 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VN12_10400 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VN12_23215 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VN12_06770 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VN12_20295 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D VN12_22245 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VN12_20320 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VN12_12515 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VN12_11220 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VN12_18900 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VN12_20325 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VN12_20340 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VN12_20335 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VN12_20280 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D VN12_20270 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VN12_20215 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VN12_18895 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VN12_18905 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VN12_18890 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VN12_10205 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VN12_20290 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VN12_20255 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VN12_20305 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VN12_10415 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VN12_20265 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VN12_01145 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VN12_22340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VN12_18500 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D VN12_20315 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VN12_20330 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VN12_20285 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VN12_20195 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VN12_03875 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VN12_09795 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VN12_20300 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VN12_11230 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VN12_12480 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VN12_22345 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VN12_21575 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pir00970]
D VN12_08950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VN12_12645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VN12_01545 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_11000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_14325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_14650 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_24860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_24925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_06555 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VN12_01940 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VN12_22600 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VN12_08770 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VN12_24825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VN12_24830 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VN12_10605 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VN12_05110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_12825 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_18935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_24800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_24820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_18315 tRNA-His K14226 tRNA-His; tRNA His
D VN12_12650 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VN12_09905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_10280 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D VN12_16740 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_18600 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_22010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24890 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D VN12_19275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VN12_23895 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VN12_24780 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VN12_23980 tRNA-Met K14230 tRNA-Met; tRNA Met
D VN12_26855 tRNA-Met K14230 tRNA-Met; tRNA Met
D VN12_20620 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VN12_04050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VN12_11140 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VN12_23585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VN12_11725 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_19850 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_22890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_23245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_17795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VN12_18930 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VN12_18945 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VN12_18920 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VN12_18940 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VN12_07040 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_11225 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_24845 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_24905 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_13570 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_20995 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_21365 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D VN12_22945 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D VN12_09790 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D VN12_19000 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VN12_12310 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VN12_20110 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VN12_01010 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VN12_11245 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D VN12_17320 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VN12_12365 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VN12_15360 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D VN12_21110 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VN12_14180 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VN12_12055 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VN12_17510 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VN12_09530 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VN12_17520 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VN12_03305 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VN12_09350 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VN12_12710 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VN12_13555 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VN12_22335 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VN12_22330 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VN12_07560 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VN12_11180 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D VN12_14925 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pir03060]
D VN12_20250 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D VN12_18915 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VN12_01675 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VN12_10700 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D VN12_10705 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VN12_06850 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VN12_02680 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_03150 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_12040 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VN12_18510 ftsY_2; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D VN12_23300 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D VN12_01770 sec-independent translocase K03116 tatA; sec-independent protein translocase protein TatA
D VN12_01775 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VN12_09140 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
D VN12_08340 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:pir04141]
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VN12_02410 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D VN12_19265 hspA; Spore protein SP21 K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pir04122]
D VN12_03860 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_18255 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_04850 rhdA; Putative thiosulfate sulfurtransferase precursor K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VN12_13810 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VN12_07960 moaE; Molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VN12_07955 moaA_1; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VN12_14690 hypothetical protein K03636 moaD; sulfur-carrier protein
D VN12_16990 ThiS family protein K03636 moaD; sulfur-carrier protein
D VN12_25930 moeB_2; Molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VN12_26980 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VN12_21315 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VN12_23610 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pir03018]
D VN12_10745 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VN12_00505 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VN12_23210 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VN12_05045 rhlE_2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VN12_08805 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VN12_19950 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VN12_25485 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VN12_00320 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_05055 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_16400 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_07670 hypothetical protein K03628 rho; transcription termination factor Rho
D VN12_10795 hypothetical protein K03628 rho; transcription termination factor Rho
D VN12_17535 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D VN12_21975 dnaK_3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VN12_18275 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19110 groL5_1; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19120 groL5_2; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_10195 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VN12_10090 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VN12_13290 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pir03030]
D VN12_07260 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VN12_21025 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VN12_22370 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VN12_23835 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VN12_01150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VN12_16315 dnaN_1; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_26510 dnaN_2; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_02030 dnaB_1; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_03855 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_11660 dnaB_3; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_19760 dnaB_4; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_26835 dnaB_5; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_22970 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VN12_20210 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VN12_06655 rnhA_1; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VN12_09185 rnhA_2; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VN12_23780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VN12_01370 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VN12_24955 recD2_3; ATP-dependent RecD-like DNA helicase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
C 03410 Base excision repair [PATH:pir03410]
D VN12_14365 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VN12_10430 Uracil DNA glycosylase superfamily protein K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D VN12_01760 yfhQ; putative A/G-specific adenine glycosylase YfhQ K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VN12_14190 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VN12_14475 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D VN12_14535 nfo; Endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VN12_23780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VN12_12485 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VN12_01370 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pir03420]
D VN12_00960 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VN12_21035 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D VN12_23940 uvrA_2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D VN12_26930 uvrA_3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D VN12_23260 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D VN12_03525 uvrC_1; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D VN12_16335 uvrC_2; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D VN12_11300 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_17990 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_21780 pcrA_3; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_23780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VN12_01370 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VN12_24420 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
C 03430 Mismatch repair [PATH:pir03430]
D VN12_14355 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VN12_05085 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VN12_11300 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_17990 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_21780 pcrA_3; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_03095 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VN12_20490 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VN12_12485 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VN12_20210 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VN12_21025 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VN12_16315 dnaN_1; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_26510 dnaN_2; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_22370 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VN12_01150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VN12_23835 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VN12_07260 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VN12_01370 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VN12_04065 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pir03440]
D VN12_12485 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VN12_20210 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VN12_18455 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VN12_10245 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D VN12_13535 recombinase A K03553 recA; recombination protein RecA
D VN12_23780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VN12_22365 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VN12_14975 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VN12_22360 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VN12_08110 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VN12_10160 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VN12_24425 recD2_2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VN12_21025 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VN12_16315 dnaN_1; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_26510 dnaN_2; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_22370 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VN12_01150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VN12_23835 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VN12_07260 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VN12_11250 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
D VN12_24420 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D VN12_00870 yrrB_1; TPR repeat-containing protein YrrB K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
D VN12_04980 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_12595 ptpA_3; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_14705 ptpA_4; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pir02010]
D VN12_13920 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VN12_13925 cysT; Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VN12_13930 cysW_1; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VN12_13935 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VN12_22070 nrtA; Nitrate transport protein NrtA precursor K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VN12_22075 cmpB; Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein
D VN12_22080 cmpD_2; Bicarbonate transport ATP-binding protein CmpD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VN12_04040 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D VN12_14675 Putative binding protein precursor K02020 modA; molybdate transport system substrate-binding protein
D VN12_14670 cysW_2; Sulfate transport system permease protein CysW K02018 modB; molybdate transport system permease protein
D VN12_14665 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VN12_01860 futA2; Iron uptake protein A2 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D VN12_16785 hypothetical protein K02011 afuB; iron(III) transport system permease protein
D VN12_22895 opuBB; Choline transport system permease protein OpuBB K05845 opuC; osmoprotectant transport system substrate-binding protein
D VN12_22900 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D VN12_03615 malK_1; Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VN12_01000 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VN12_00990 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VN12_00995 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VN12_16075 D-allose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D VN12_16070 rbsC; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VN12_16065 rbsA; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VN12_01730 pstS_1; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D VN12_18620 pstS_2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D VN12_18615 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VN12_18610 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VN12_18605 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VN12_24645 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VN12_24625 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VN12_24630 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D VN12_01710 troA; Periplasmic zinc-binding protein TroA precursor K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D VN12_23110 mntB_2; Manganese transport system membrane protein MntB K11708 troC; manganese/zinc/iron transport system permease protein
D VN12_16410 mntB_1; Manganese transport system membrane protein MntB K11709 troD; manganese/zinc/iron transport system permease protein
D VN12_01715 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D VN12_25850 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D VN12_25845 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VN12_01275 ABC-2 family transporter protein K09696 natB; sodium transport system permease protein
D VN12_03180 ABC-2 family transporter protein K09696 natB; sodium transport system permease protein
D VN12_01280 ybhF_1; putative ABC transporter ATP-binding protein YbhF K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D VN12_03175 ybhF_3; putative ABC transporter ATP-binding protein YbhF K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D VN12_23635 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein
D VN12_17230 lolD_3; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VN12_23640 lolD_4; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VN12_11470 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D VN12_23695 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D VN12_13325 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VN12_04595 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:pir02060]
D VN12_10750 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VN12_10755 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VN12_10760 fruA; PTS system fructose-specific EIIABC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pir03070]
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_00475 gspF_1; Putative type II secretion system protein F K02455 gspF; general secretion pathway protein F
D VN12_00470 xcpT_1; Type II secretion system protein G precursor K02456 gspG; general secretion pathway protein G
D VN12_00465 hypothetical protein K02457 gspH; general secretion pathway protein H
D VN12_00460 hypothetical protein K02458 gspI; general secretion pathway protein I
D VN12_00480 xpsE_1; Type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VN12_10700 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D VN12_18915 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VN12_01675 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VN12_20250 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D VN12_10705 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VN12_06850 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VN12_02680 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_03150 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_18510 ftsY_2; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D VN12_12040 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VN12_01770 sec-independent translocase K03116 tatA; sec-independent protein translocase protein TatA
D VN12_01775 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VN12_09140 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
D VN12_15160 Phage-related baseplate assembly protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VN12_15275 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VN12_15280 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VN12_15315 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VN12_15250 clpB; Chaperone protein ClpB K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pir02020]
D VN12_06690 phoR; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VN12_03335 phoB; Phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VN12_12795 phoD; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VN12_01730 pstS_1; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D VN12_18620 pstS_2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D VN12_00190 degP_1; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_00200 hhoB_1; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_01095 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_14240 degP_3; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_15605 htrA_1; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_18480 hhoB_2; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_20090 htrA_2; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_21965 cusS_2; Sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VN12_21960 copR; Transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VN12_11475 fliC; B-type flagellin K02406 fliC; flagellin
D VN12_19290 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VN12_26880 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D VN12_25095 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VN12_25090 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VN12_25110 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D VN12_25105 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D VN12_25100 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D VN12_12130 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D VN12_00005 dnaA_1; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VN12_02685 dnaA_2; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VN12_14595 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D VN12_12605 ATP:dephospho-CoA triphosphoribosyl transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D VN12_01280 ybhF_1; putative ABC transporter ATP-binding protein YbhF K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D VN12_03175 ybhF_3; putative ABC transporter ATP-binding protein YbhF K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D VN12_01275 ABC-2 family transporter protein K09696 natB; sodium transport system permease protein
D VN12_03180 ABC-2 family transporter protein K09696 natB; sodium transport system permease protein
D VN12_01955 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_04095 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_05130 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_07200 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_07900 csrA_1; Carbon storage regulator K03563 csrA; carbon storage regulator
D VN12_10610 csrA_2; Carbon storage regulator K03563 csrA; carbon storage regulator
D VN12_12140 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_19835 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_16860 nreC_1; Oxygen regulatory protein NreC K07696 nreC; two-component system, NarL family, response regulator NreC
D VN12_03185 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D VN12_06740 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D VN12_17275 SAF domain protein K02279 cpaB; pilus assembly protein CpaB
D VN12_17270 xpsD; Type II secretion system protein D precursor K02280 cpaC; pilus assembly protein CpaC
D VN12_17265 minD; Septum site-determining protein MinD K02282 cpaE; pilus assembly protein CpaE
D VN12_22225 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VN12_22220 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D VN12_22215 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
D VN12_21775 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VN12_00225 glnB_1; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VN12_21770 glnB_2; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VN12_17740 ntrC_1; Nitrogen assimilation regulatory protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VN12_22060 ntrC_2; Nitrogen assimilation regulatory protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VN12_12865 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_17660 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_02560 zraS_1; Sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VN12_09110 zraS_3; Sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VN12_09115 zraR_6; Transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG
D VN12_02570 zraR_2; Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VN12_09495 zraR_7; Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VN12_21235 zraR_11; Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VN12_23000 rpoN2; RNA polymerase sigma-54 factor 2 K03092 rpoN; RNA polymerase sigma-54 factor
D VN12_00590 cheR2_1; Chemotaxis protein methyltransferase Cher2 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VN12_25210 cheR2_2; Chemotaxis protein methyltransferase Cher2 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VN12_05235 luxQ_4; Autoinducer 2 sensor kinase/phosphatase LuxQ K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D VN12_04475 bdlA_1; Biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D VN12_12440 ctpH; Methyl-accepting chemotaxis protein CtpH K03406 mcp; methyl-accepting chemotaxis protein
D VN12_25215 bdlA_2; Biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D VN12_00580 cheW_1; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_04950 cheV; Chemotaxis protein CheV K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_25220 cheW_2; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_00575 cheA_1; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_03060 cheA_3; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_04940 cheA_4; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_25205 cheA_5; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_00565 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_25190 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_00585 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05230 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_25185 cheB_2; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_06790 fixL_2; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D VN12_19255 fixL_4; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D VN12_01140 regB; Sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D VN12_10255 regA; Photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA
D VN12_11510 gdhB_1; Quinoprotein glucose dehydrogenase B precursor K08738 CYC; cytochrome c
D VN12_06835 hypothetical protein K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D VN12_06825 ccoP2; Cbb3-type cytochrome c oxidase subunit CcoP2 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_13540 yfkJ; Low molecular weight protein-tyrosine-phosphatase YfkJ K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VN12_06885 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VN12_06965 wbpA_2; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VN12_06645 Anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VN12_00195 degP_2; Periplasmic serine endoprotease DegP precursor
D VN12_01365 phoP_1; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
D VN12_03070 Hpt domain protein
D VN12_03745 kinE_1; Sporulation kinase E
D VN12_04665 aerobic respiration control sensor protein ArcB
D VN12_04870 divJ; Histidine protein kinase DivJ
D VN12_09435 phoA; Alkaline phosphatase precursor
D VN12_20925 Polysaccharide biosynthesis/export protein
D VN12_22465 rcsC; Sensor histidine kinase RcsC
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome [PATH:pir04142]
D VN12_04930 nedA_1; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D VN12_21630 nedA_2; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D VN12_00245 atsA_1; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_04985 atsA_9; Arylsulfatase precursor K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_13655 atsA_19; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_14750 atsA_20; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_17235 atsA_22; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_19390 atsA_23; Arylsulfatase K01134 ARSA; arylsulfatase A [EC:3.1.6.8]
D VN12_02835 atsA_6; Arylsulfatase K01135 ARSB; arylsulfatase B [EC:3.1.6.12]
D VN12_16015 atsA_21; Arylsulfatase K01132 GALNS; N-acetylgalactosamine-6-sulfatase [EC:3.1.6.4]
D VN12_09385 Arylsulfatase K01136 IDS; iduronate 2-sulfatase [EC:3.1.6.13]
D VN12_21255 betC_6; Choline-sulfatase K01136 IDS; iduronate 2-sulfatase [EC:3.1.6.13]
D VN12_22170 betC_7; Choline-sulfatase K01136 IDS; iduronate 2-sulfatase [EC:3.1.6.13]
D VN12_04990 betC_1; Choline-sulfatase K01565 SGSH; N-sulfoglucosamine sulfohydrolase [EC:3.10.1.1]
D VN12_10510 betC_2; Choline-sulfatase K01565 SGSH; N-sulfoglucosamine sulfohydrolase [EC:3.10.1.1]
D VN12_12025 atsA_16; Arylsulfatase precursor K01565 SGSH; N-sulfoglucosamine sulfohydrolase [EC:3.10.1.1]
D VN12_19420 pkn1_3; Serine/threonine-protein kinase pkn1 K13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7]
D VN12_01650 atsA_4; Arylsulfatase precursor
C 04146 Peroxisome [PATH:pir04146]
D VN12_10450 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D VN12_14970 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VN12_12960 sodA; Mn Superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pir02024]
D VN12_07305 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VN12_09455 pabA; Aminodeoxychorismate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VN12_16045 trpG; Anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VN12_04760 novM; L-noviosyl transferase K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D VN12_19425 aroH_2; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VN12_25090 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VN12_24645 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VN12_24625 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VN12_24630 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D VN12_16750 hypothetical protein K01728 pel; pectate lyase [EC:4.2.2.2]
D VN12_10450 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D VN12_02585 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VN12_05375 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D VN12_02545 oprM_1; Outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D VN12_25725 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VN12_06850 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VN12_10700 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D VN12_18915 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VN12_01675 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VN12_20250 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D VN12_10705 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VN12_02680 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_03150 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_18510 ftsY_2; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D VN12_12040 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VN12_10260 sdrC; Serine-aspartate repeat-containing protein C precursor
D VN12_12045 hypothetical protein
D VN12_12465 Putative peptidyl-prolyl cis-trans isomerase
D VN12_23010 hypothetical protein
D VN12_23015 hypothetical protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pir02030]
D VN12_04475 bdlA_1; Biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D VN12_12440 ctpH; Methyl-accepting chemotaxis protein CtpH K03406 mcp; methyl-accepting chemotaxis protein
D VN12_25215 bdlA_2; Biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D VN12_16075 D-allose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D VN12_00575 cheA_1; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_03060 cheA_3; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_04940 cheA_4; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_25205 cheA_5; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_00580 cheW_1; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_04950 cheV; Chemotaxis protein CheV K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_25220 cheW_2; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_00565 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_25190 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_25200 hypothetical protein K03410 cheC; chemotaxis protein CheC
D VN12_00560 hypothetical protein K03409 cheX; chemotaxis protein CheX
D VN12_00585 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05230 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_25185 cheB_2; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05235 luxQ_4; Autoinducer 2 sensor kinase/phosphatase LuxQ K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D VN12_25195 cheD; Chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D VN12_00590 cheR2_1; Chemotaxis protein methyltransferase Cher2 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VN12_25210 cheR2_2; Chemotaxis protein methyltransferase Cher2 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VN12_03845 fliG_1; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VN12_14150 fliG_2; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VN12_23880 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VN12_19210 fliN_1; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_23800 fliN_2; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_26880 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D VN12_26875 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pir02040]
D VN12_16820 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VN12_16825 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D VN12_03845 fliG_1; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VN12_14150 fliG_2; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VN12_14145 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D VN12_14140 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VN12_14135 flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D VN12_14125 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VN12_23880 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VN12_19210 fliN_1; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_23800 fliN_2; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_23805 Flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D VN12_17435 fliP; Flagellar biosynthetic protein FliP precursor K02419 fliP; flagellar biosynthesis protein FliP
D VN12_17440 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VN12_17445 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VN12_12435 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VN12_17450 flhB; Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VN12_17150 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VN12_21800 flgB; Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VN12_16815 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VN12_25665 flgD; Basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VN12_25670 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VN12_17160 flgG_2; Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D VN12_17155 flgG_1; Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VN12_17145 flgH; Flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D VN12_18185 flgI; Flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D VN12_02660 flgK; Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D VN12_02655 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VN12_11475 fliC; B-type flagellin K02406 fliC; flagellin
D VN12_11480 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D VN12_09515 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VN12_26880 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D VN12_26875 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
D VN12_06645 Anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VN12_03930 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D VN12_12345 sigA_1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_13520 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_14380 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VN12_17700 sigA_3; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_22975 sigA_4; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_23000 rpoN2; RNA polymerase sigma-54 factor 2 K03092 rpoN; RNA polymerase sigma-54 factor
D VN12_19290 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells [PATH:pir04820]
D VN12_00505 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VN12_00820 hypothetical protein
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:pir04981]
D VN12_17780 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D VN12_10465 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VN12_00035 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VN12_20125 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VN12_00740 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:pir04980]
D VN12_01560 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VN12_00740 metH; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pir01501]
D VN12_12610 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_13785 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_22690 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_01585 macA_1; Macrolide export protein MacA K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_02555 ttgA; putative efflux pump periplasmic linker TtgA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_03600 mdtA_1; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_07185 mdtA_3; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_23840 mdtA_5; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_01590 mdtC_1; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_02550 bepE_2; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_03170 mdtC_2; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_03595 bepE_3; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_07180 mdtB; Multidrug resistance protein MdtB K18138 acrB; multidrug efflux pump
D VN12_22310 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D VN12_02545 oprM_1; Outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pir01503]
D VN12_00190 degP_1; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_00200 hhoB_1; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_01095 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_14240 degP_3; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_15605 htrA_1; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_18480 hhoB_2; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_20090 htrA_2; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_01585 macA_1; Macrolide export protein MacA K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_02555 ttgA; putative efflux pump periplasmic linker TtgA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_03600 mdtA_1; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_07185 mdtA_3; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_23840 mdtA_5; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_01590 mdtC_1; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_02550 bepE_2; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_03170 mdtC_2; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_03595 bepE_3; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_07180 mdtB; Multidrug resistance protein MdtB K18138 acrB; multidrug efflux pump
D VN12_22310 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_10725 lpxA_1; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VN12_25045 lpxA_2; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VN12_14595 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D VN12_00195 degP_2; Periplasmic serine endoprotease DegP precursor
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pir01000]
C 01001 Protein kinases [BR:pir01001]
D VN12_00150 pknB_1; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_02830 prkC_2; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_03670 prkC_3; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_04635 stkP_1; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_05155 pknB_2; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_05245 pknB_3; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_07535 pknL_1; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_08225 stkP_2; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_08535 pknB_4; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_09000 pknB_6; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_10295 stkP_3; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_11905 prkC_4; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_13020 prkC_5; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_13190 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_14005 prkC_8; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_14810 prkC_10; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_14990 prkC_11; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_16180 stkP_4; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_16450 prkC_13; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_16455 pknD_2; Serine/threonine-protein kinase PknD K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_16795 pknB_9; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_16925 prkC_14; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_17770 pknB_10; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_18530 prkC_15; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_18695 pknL_2; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_18765 pknB_11; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_19170 prkC_16; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_20165 pknB_12; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_20890 pknB_13; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_21190 prkC_17; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_21840 prkC_18; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_21995 stkP_5; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_23175 pknB_14; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VN12_09585 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VN12_25870 ywqD; Tyrosine-protein kinase YwqD K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VN12_06690 phoR; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VN12_21965 cusS_2; Sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VN12_25095 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VN12_05350 cusS_1; Sensor kinase CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D VN12_02560 zraS_1; Sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VN12_09110 zraS_3; Sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VN12_14095 tmoS; Sensor histidine kinase TmoS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VN12_00575 cheA_1; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_03060 cheA_3; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_04940 cheA_4; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_25205 cheA_5; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_06790 fixL_2; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D VN12_19255 fixL_4; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D VN12_01140 regB; Sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pir01009]
D VN12_03740 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VN12_02405 Putative protein phosphatase 2C-type K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D VN12_03495 stp_1; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D VN12_09305 Putative protein phosphatase 2C-type K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D VN12_14435 stp_2; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D VN12_27095 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VN12_13805 Phosphorylated carbohydrates phosphatase K17623 PUDP; pseudouridine 5'-phosphatase [EC:3.1.3.96]
C 01002 Peptidases and inhibitors [BR:pir01002]
D VN12_08340 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VN12_06750 Type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VN12_01415 pcp; Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D VN12_23270 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VN12_21875 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D VN12_07610 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VN12_12940 gltB_2; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VN12_23955 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VN12_06960 asnB_1; Asparagine synthetase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VN12_12740 Asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VN12_15645 asnB_2; Asparagine synthetase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VN12_00325 yraA_1; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D VN12_15940 yraA_2; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D VN12_22555 yraA_3; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D VN12_04750 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D VN12_16360 dcp; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D VN12_10505 pepF1; Oligoendopeptidase F, plasmid K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D VN12_12060 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D VN12_07625 Peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D VN12_13120 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VN12_11755 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VN12_21465 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VN12_20905 cpg2; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D VN12_10515 pepT; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VN12_06780 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VN12_23590 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VN12_07915 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VN12_17600 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VN12_04895 Aminopeptidase S K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D VN12_13485 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VN12_11970 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VN12_21715 ftsH4; ATP-dependent zinc metalloprotease FtsH 4 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VN12_21705 Putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VN12_01020 Peptidase family M50 K16922 yydH; putative peptide zinc metalloprotease protein
D VN12_15200 Peptidase family M50 K16922 yydH; putative peptide zinc metalloprotease protein
D VN12_22150 yydH; Putative peptide zinc metalloprotease protein YydH K16922 yydH; putative peptide zinc metalloprotease protein
D VN12_22580 Peptidase family M50 K16922 yydH; putative peptide zinc metalloprotease protein
D VN12_16160 mtfA; Protein MtfA K09933 mtfA; MtfA peptidase
D VN12_00190 degP_1; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_00200 hhoB_1; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_01095 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_14240 degP_3; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_15605 htrA_1; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_18480 hhoB_2; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_20090 htrA_2; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_00075 f1pep1_1; Prolyl endopeptidase precursor K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VN12_00965 f1pep1_2; Prolyl endopeptidase precursor K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VN12_04980 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_12595 ptpA_3; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_14705 ptpA_4; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_20485 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VN12_12910 clpP_1; ATP-dependent Clp protease proteolytic subunit precursor K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VN12_12915 clpP_2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VN12_20175 pepX; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D VN12_07615 ctpB; Carboxy-terminal processing protease CtpB precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VN12_14470 putative CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VN12_22350 prc; Tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VN12_04460 hypothetical protein K08676 tri; tricorn protease [EC:3.4.21.-]
D VN12_17750 sppA_2; Protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
D VN12_07965 cphB_1; Cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D VN12_20975 glpG_2; Rhomboid protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VN12_17695 gluP; Rhomboid protease GluP K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D VN12_25620 Rhomboid family protein K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D VN12_16600 Caudovirus prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D VN12_20770 Caudovirus prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D VN12_11335 iaaA; Isoaspartyl peptidase precursor K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VN12_16325 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_19445 ywrD; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VN12_19185 yhbU; putative protease YhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:pir01003]
D VN12_13450 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D VN12_00870 yrrB_1; TPR repeat-containing protein YrrB K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D VN12_24240 Mannosyltransferase putative K05535 MNN2; alpha 1,2-mannosyltransferase [EC:2.4.1.-]
D VN12_13415 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VN12_04760 novM; L-noviosyl transferase K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D VN12_07760 tagA_1; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D VN12_03690 tagO_1; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_13315 tagO_2; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pir01005]
D VN12_10725 lpxA_1; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VN12_25045 lpxA_2; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VN12_22020 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VN12_10720 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VN12_22405 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VN12_22400 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VN12_12845 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VN12_14455 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VN12_18075 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VN12_10740 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VN12_14965 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VN12_18560 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VN12_18555 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VN12_25565 rfaQ; Lipopolysaccharide core heptosyltransferase RfaQ K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D VN12_19090 rfaF; ADP-heptose--LPS heptosyltransferase 2 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VN12_03130 mfpsA_1; Mannosylfructose-phosphate synthase K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D VN12_08245 hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D VN12_03690 tagO_1; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D VN12_13315 tagO_2; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pir01011]
D VN12_18090 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VN12_22940 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VN12_21330 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VN12_20485 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 01004 Lipid biosynthesis proteins [BR:pir01004]
D VN12_07050 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VN12_08605 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VN12_09045 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VN12_07045 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_10645 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_14070 fabF_3; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_18105 fabF_4; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_20435 fabF_5; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VN12_05330 fabG_3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07000 fabG_4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_07240 fabG_5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_08545 fabG_6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_09805 fabG_7; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VN12_11205 fabZ_1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_12970 fabZ_2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_14075 fabZ_3; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_21855 fabZ_4; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VN12_07860 fabI_1; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_12275 fabI_2; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D VN12_00700 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VN12_10450 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D VN12_17760 plsC_3; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pir01008]
D VN12_09965 gloB_1; Hydroxyacylglutathione hydrolase K05555 actIV; cyclase [EC:4.-.-.-]
D VN12_12750 hypothetical protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D VN12_10170 cefD; Isopenicillin N epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:pir01006]
D VN12_18470 Farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D VN12_26985 ispB_2; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VN12_07875 uppS; Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VN12_17805 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VN12_23065 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VN12_12125 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pir01007]
D VN12_13570 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_20995 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_19000 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VN12_07560 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VN12_11180 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VN12_21110 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VN12_09350 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VN12_14180 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VN12_17520 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VN12_17510 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VN12_09530 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VN12_03305 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VN12_20110 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VN12_01010 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VN12_13555 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VN12_11245 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D VN12_12365 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VN12_12710 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VN12_17320 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VN12_12310 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VN12_22335 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VN12_22330 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VN12_22965 aspC; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VN12_09320 alaC; Glutamate-pyruvate aminotransferase AlaC K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D VN12_11605 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D VN12_19465 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VN12_17670 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VN12_19125 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VN12_18395 davT; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VN12_21945 bioK; L-Lysine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VN12_04510 kat; 3-aminobutyryl-CoA aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VN12_10685 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VN12_05070 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_19340 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VN12_14895 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VN12_04535 epsN_1; Putative pyridoxal phosphate-dependent aminotransferase EpsN K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pir00194]
D VN12_21515 atpC; ATP synthase epsilon chain, sodium ion specific K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VN12_21520 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VN12_21525 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VN12_21530 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VN12_21535 atpH; ATP synthase subunit delta, sodium ion specific K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VN12_21540 atpF; ATP synthase subunit b, sodium ion specific K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VN12_21545 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VN12_21550 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pir03000]
D VN12_09955 transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D VN12_25810 nhaR; Transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VN12_13695 xylR_1; Xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VN12_15090 xylR_2; Xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VN12_22320 rutR; HTH-type transcriptional regulator RutR K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D VN12_05315 nemR; HTH-type transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VN12_04815 yusO_2; putative HTH-type transcriptional regulator YusO K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VN12_14385 Helix-turn-helix domain protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D VN12_19155 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VN12_25710 perR; Transcriptional regulator PerR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VN12_01465 nsrR; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D VN12_09335 sdpR_2; Transcriptional repressor SdpR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VN12_26030 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D VN12_17820 mntR; Transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D VN12_12610 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_13785 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_22690 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_03385 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VN12_13915 fhlA; Formate hydrogenlyase transcriptional activator K12146 hyfR; hydrogenase-4 transcriptional activator
D VN12_07135 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D VN12_10540 Helix-turn-helix domain protein K07729 K07729; putative transcriptional regulator
D VN12_07115 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VN12_19085 rsxG; Electron transport complex subunit RsxG K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D VN12_06620 spo0C_1; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_08160 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_23420 parB; Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_24260 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_08010 rnk; Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D VN12_10570 Prophage CP4-57 regulatory protein (AlpA) K07733 alpA; prophage regulatory protein
D VN12_17010 hypothetical protein K07735 algH; putative transcriptional regulator
D VN12_23115 hypothetical protein K07735 algH; putative transcriptional regulator
D VN12_07565 dksA_1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D VN12_19195 dksA_2; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D VN12_18475 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:pir03021]
D VN12_10410 rpoA_1; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VN12_17800 rpoA_2; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VN12_18035 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VN12_18030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VN12_01690 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VN12_03930 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor
D VN12_12345 sigA_1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_13520 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_14380 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VN12_17700 sigA_3; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_22975 sigA_4; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D VN12_23220 rpoE_6; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VN12_23000 rpoN2; RNA polymerase sigma-54 factor 2 K03092 rpoN; RNA polymerase sigma-54 factor
D VN12_19290 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VN12_13055 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D VN12_10270 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D VN12_18910 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D VN12_25180 rsbP_2; Phosphoserine phosphatase RsbP K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D VN12_09590 btrV; Putative anti-sigma factor antagonist BtrV K04749 rsbV; anti-sigma B factor antagonist
D VN12_09585 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D VN12_07565 dksA_1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D VN12_19195 dksA_2; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D VN12_20545 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VN12_07670 hypothetical protein K03628 rho; transcription termination factor Rho
D VN12_10795 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pir03019]
D VN12_10745 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VN12_14925 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VN12_17535 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D VN12_08805 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VN12_10425 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D VN12_05045 rhlE_2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VN12_19950 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VN12_25485 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VN12_00320 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_05055 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_16400 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_00505 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VN12_23210 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VN12_07670 hypothetical protein K03628 rho; transcription termination factor Rho
D VN12_10795 hypothetical protein K03628 rho; transcription termination factor Rho
D VN12_21975 dnaK_3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VN12_18275 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19110 groL5_1; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19120 groL5_2; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_10195 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VN12_10090 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VN12_01955 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_04095 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_05130 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_07200 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_07900 csrA_1; Carbon storage regulator K03563 csrA; carbon storage regulator
D VN12_10610 csrA_2; Carbon storage regulator K03563 csrA; carbon storage regulator
D VN12_12140 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_19835 hypothetical protein K03563 csrA; carbon storage regulator
D VN12_13775 hrpB_2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D VN12_02540 hrpB_1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pir03011]
D VN12_17930 rpsA_1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VN12_23050 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1
D VN12_20230 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VN12_20310 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VN12_08965 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VN12_20260 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VN12_20205 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VN12_09915 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VN12_20275 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VN12_10200 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VN12_20345 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VN12_10405 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D VN12_09910 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VN12_10400 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VN12_23215 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VN12_06770 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VN12_20295 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D VN12_22245 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VN12_20320 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VN12_12515 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VN12_11220 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VN12_18900 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VN12_20325 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VN12_20340 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VN12_20335 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VN12_20280 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D VN12_20270 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VN12_20215 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VN12_18895 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VN12_18905 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VN12_18890 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VN12_10205 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VN12_20290 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VN12_20255 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VN12_20305 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VN12_10415 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VN12_20265 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VN12_01145 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VN12_22340 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VN12_18500 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D VN12_20315 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VN12_20330 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VN12_20285 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VN12_03875 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VN12_09795 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VN12_20300 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VN12_11230 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VN12_12480 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VN12_22345 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VN12_21575 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D VN12_20195 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VN12_14550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VN12_12640 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VN12_12635 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pir03009]
D VN12_14925 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VN12_03880 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D VN12_07565 dksA_1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D VN12_19195 dksA_2; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D VN12_13055 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D VN12_10270 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D VN12_18910 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D VN12_22265 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VN12_20220 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VN12_11575 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VN12_09030 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VN12_15370 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VN12_01110 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VN12_00350 rlmI_1; Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VN12_09015 rlmI_2; Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VN12_22140 rlmK; Ribosomal RNA large subunit methyltransferase K K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VN12_17395 putative 23S rRNA ribose 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D VN12_17210 rlmN_1; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VN12_18515 rlmN_2; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VN12_11825 rluD_1; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VN12_13505 rluD_3; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VN12_16080 rluD_4; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VN12_18520 rluD_5; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VN12_21360 rluC; Ribosomal large subunit pseudouridine synthase C K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VN12_05035 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VN12_16705 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VN12_16710 Acetyltransferase (GNAT) family protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VN12_12200 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D VN12_10745 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VN12_09555 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VN12_19950 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VN12_25485 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VN12_11965 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VN12_14480 der; GTPase Der K03977 engA; GTPase
D VN12_25830 hflX; GTPase HflX K03665 hflX; GTPase
D VN12_06685 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VN12_13065 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VN12_13955 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D VN12_16055 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D VN12_10765 hpf; Ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D VN12_03300 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:pir03016]
D VN12_12490 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D VN12_13290 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VN12_02940 rtcB; RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D VN12_13570 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_20995 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_12710 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VN12_17520 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VN12_09530 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VN12_14180 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VN12_19000 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VN12_09350 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VN12_03305 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VN12_20110 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VN12_12310 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VN12_01010 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VN12_11245 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D VN12_17320 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VN12_12365 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VN12_21110 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VN12_17510 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VN12_13555 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VN12_22335 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VN12_22330 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VN12_07560 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VN12_11180 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VN12_18440 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VN12_23735 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VN12_06635 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VN12_10225 trmB_1; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VN12_18205 trmB_2; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VN12_08925 hpaIIM; Modification methylase HpaII K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D VN12_22440 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VN12_17335 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VN12_26075 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VN12_03860 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_18255 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_06685 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VN12_17805 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VN12_17940 mnmE_1; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VN12_21005 mnmE_2; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VN12_02530 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VN12_07665 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D VN12_11800 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VN12_12070 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VN12_25290 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D VN12_23275 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D VN12_20535 tadA_3; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VN12_12150 dusC; tRNA-dihydrouridine synthase C K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VN12_12240 dus; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VN12_14270 ubiE_2; Demethylmenaquinone methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VN12_06775 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VN12_18190 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VN12_12155 aviRb_1; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D VN12_22005 aviRb_2; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D VN12_20365 truC_1; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VN12_13810 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VN12_00635 putative dimethyl sulfoniopropionate demethylase K06980 ygfZ; tRNA-modifying protein YgfZ
D VN12_17195 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VN12_04845 thiO; Glycine oxidase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VN12_09175 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VN12_01735 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VN12_03850 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VN12_22990 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VN12_03395 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VN12_03400 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VN12_15000 queG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VN12_01720 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VN12_00295 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VN12_13125 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VN12_01380 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VN12_09700 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VN12_08805 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VN12_23210 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pir03012]
D VN12_13060 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VN12_19280 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D VN12_10250 yheS; putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VN12_20235 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D VN12_18925 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D VN12_18785 fusA_1; Elongation factor G K02355 fusA; elongation factor G
D VN12_21045 fusA_2; Elongation factor G K02355 fusA; elongation factor G
D VN12_11235 prfA_1; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VN12_21730 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D VN12_11240 prmC_2; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VN12_20200 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VN12_17400 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D VN12_16975 efp; Elongation factor P K02356 efp; elongation factor P
D VN12_07300 epmA; Elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D VN12_09355 epmB; L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D VN12_19020 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D VN12_22475 arfB; Peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pir03110]
D VN12_08815 clpB1; Chaperone protein ClpB 1 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VN12_23190 clpC; Negative regulator of genetic competence ClpC/MecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D VN12_13705 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VN12_21975 dnaK_3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VN12_16380 hscC; Chaperone protein HscC K04045 hscC; molecular chaperone HscC
D VN12_18275 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19110 groL5_1; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19120 groL5_2; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19105 dnaJ_2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VN12_18760 cbpA; Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D VN12_19100 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VN12_02410 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D VN12_19265 hspA; Spore protein SP21 K13993 HSP20; HSP20 family protein
D VN12_18280 groS_1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D VN12_19115 groS_2; 10 kDa chaperonin K04078 groES; chaperonin GroES
D VN12_20190 groS_3; 10 kDa chaperonin K04078 groES; chaperonin GroES
D VN12_00190 degP_1; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_00200 hhoB_1; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_01095 mucD; putative periplasmic serine endoprotease DegP-like precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_14240 degP_3; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_15605 htrA_1; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_18480 hhoB_2; Putative serine protease HhoB precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_20090 htrA_2; Putative serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D VN12_11970 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VN12_21715 ftsH4; ATP-dependent zinc metalloprotease FtsH 4 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VN12_21550 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VN12_17250 mip; Peptidyl-prolyl cis-trans isomerase Mip precursor K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VN12_16940 prsA; Foldase protein PrsA K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VN12_16110 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
D VN12_17550 Thioredoxin C-1 K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pir04131]
D VN12_13365 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VN12_23300 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D VN12_01750 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VN12_00215 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pir04121]
C 03051 Proteasome [BR:pir03051]
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pir03032]
D VN12_06655 rnhA_1; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VN12_09185 rnhA_2; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VN12_24955 recD2_3; ATP-dependent RecD-like DNA helicase K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D VN12_24420 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D VN12_14620 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D VN12_00005 dnaA_1; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VN12_02685 dnaA_2; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VN12_02030 dnaB_1; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_03855 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_11660 dnaB_3; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_19760 dnaB_4; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_26835 dnaB_5; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VN12_22970 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VN12_20210 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VN12_21025 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VN12_16315 dnaN_1; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_26510 dnaN_2; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_01150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VN12_23835 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VN12_07260 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VN12_22370 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VN12_23780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VN12_01370 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VN12_04065 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VN12_11380 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VN12_13455 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VN12_11385 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VN12_23745 gyrB_3; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VN12_09720 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pir03036]
D VN12_00870 yrrB_1; TPR repeat-containing protein YrrB K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D VN12_14925 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VN12_14620 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D VN12_18760 cbpA; Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D VN12_00005 dnaA_1; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VN12_02685 dnaA_2; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D VN12_09080 smc_1; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D VN12_03840 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D VN12_00260 hypothetical protein K06024 scpB; segregation and condensation protein B
D VN12_11345 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D VN12_00715 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VN12_17330 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VN12_01585 macA_1; Macrolide export protein MacA K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_02555 ttgA; putative efflux pump periplasmic linker TtgA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_03600 mdtA_1; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_07185 mdtA_3; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_23840 mdtA_5; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_02750 soj_1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D VN12_06625 soj_2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D VN12_23425 soj_3; Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein
D VN12_06620 spo0C_1; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_08160 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_23420 parB; Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_24260 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_02530 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VN12_15370 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VN12_14815 xerC_1; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D VN12_09920 xerD_1; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VN12_10900 xerD_2; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VN12_10930 xerD_3; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VN12_10960 xerD_4; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VN12_18345 xerD_5; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VN12_23510 xerC_2; Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D VN12_13240 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VN12_05455 Adenosine monophosphate-protein transferase SoFic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
C 03400 DNA repair and recombination proteins [BR:pir03400]
D VN12_18220 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VN12_06595 cry2; Cryptochrome-like protein cry2 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VN12_15060 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VN12_10430 Uracil DNA glycosylase superfamily protein K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D VN12_01760 yfhQ; putative A/G-specific adenine glycosylase YfhQ K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VN12_14365 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VN12_24420 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D VN12_17650 Nudix hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VN12_11145 Deoxyribodipyrimidine photo-lyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D VN12_14475 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D VN12_14190 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VN12_14535 nfo; Endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VN12_12485 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VN12_01370 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VN12_23780 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VN12_21035 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D VN12_23940 uvrA_2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D VN12_26930 uvrA_3; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D VN12_23260 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D VN12_03525 uvrC_1; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D VN12_16335 uvrC_2; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D VN12_11300 pcrA_1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_17990 pcrA_2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_21780 pcrA_3; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VN12_18035 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VN12_18030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VN12_10410 rpoA_1; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VN12_17800 rpoA_2; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VN12_01690 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VN12_00960 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VN12_14355 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VN12_05085 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VN12_03095 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VN12_20490 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VN12_21025 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VN12_16315 dnaN_1; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_26510 dnaN_2; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VN12_01150 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VN12_23835 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VN12_07260 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VN12_22370 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VN12_20210 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VN12_04065 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VN12_24425 recD2_2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VN12_13535 recombinase A K03553 recA; recombination protein RecA
D VN12_22365 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VN12_14975 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VN12_22360 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VN12_06165 rusA_1; Crossover junction endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D VN12_24055 rusA_2; Crossover junction endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D VN12_11250 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VN12_08110 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VN12_10160 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VN12_18455 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VN12_10245 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D VN12_01065 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D VN12_24065 type I restriction enzyme EcoKI subunit R K19789 radD; DNA repair protein RadD
D VN12_11380 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VN12_13455 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VN12_11385 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VN12_23745 gyrB_3; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VN12_09720 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VN12_01985 recombination and repair protein RecT K07455 recT; recombination protein RecT
D VN12_19805 recombination and repair protein RecT K07455 recT; recombination protein RecT
D VN12_26815 recombination and repair protein RecT K07455 recT; recombination protein RecT
D VN12_14620 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D VN12_00320 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_05055 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_16400 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VN12_09930 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VN12_13345 hypothetical protein K14160 imuA; protein ImuA
D VN12_13340 DNA polymerase IV K14161 imuB; protein ImuB
D VN12_03915 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D VN12_17385 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D VN12_13285 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VN12_01810 rhlE_1; ATP-dependent RNA helicase RhlE K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D VN12_05550 nrdZ; Ribonucleoside-diphosphate reductase NrdZ K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VN12_07255 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VN12_05540 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VN12_18125 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:pir03029]
D VN12_13060 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VN12_19280 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D VN12_20235 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D VN12_18925 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D VN12_18785 fusA_1; Elongation factor G K02355 fusA; elongation factor G
D VN12_21045 fusA_2; Elongation factor G K02355 fusA; elongation factor G
D VN12_07560 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VN12_09530 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VN12_20110 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VN12_11245 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D VN12_09350 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VN12_21365 gatA_2; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D VN12_22945 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D VN12_09790 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D VN12_20210 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VN12_03830 bamA; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family
D VN12_03835 tamA; Translocation and assembly module TamA precursor K07277 SAM50; outer membrane protein insertion porin family
D VN12_20860 Erv1 / Alr family protein K17783 ERV1; mitochondrial FAD-linked sulfhydryl oxidase [EC:1.8.3.2]
D VN12_21975 dnaK_3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VN12_19100 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VN12_18275 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19110 groL5_1; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19120 groL5_2; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_18280 groS_1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D VN12_19115 groS_2; 10 kDa chaperonin K04078 groES; chaperonin GroES
D VN12_20190 groS_3; 10 kDa chaperonin K04078 groES; chaperonin GroES
D VN12_19105 dnaJ_2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VN12_03860 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_18255 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_13240 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VN12_12125 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VN12_12130 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D VN12_06850 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VN12_03730 hypothetical protein K07152 SCO1; protein SCO1
D VN12_17875 hypothetical protein K07152 SCO1; protein SCO1
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pir02000]
D VN12_04595 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VN12_07320 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D VN12_15875 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D VN12_17015 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D VN12_08820 uup; ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein
D VN12_13920 sbp; Sulfate-binding protein precursor K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VN12_13925 cysT; Sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VN12_13930 cysW_1; Sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VN12_13935 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VN12_04040 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D VN12_14675 Putative binding protein precursor K02020 modA; molybdate transport system substrate-binding protein
D VN12_14670 cysW_2; Sulfate transport system permease protein CysW K02018 modB; molybdate transport system permease protein
D VN12_14665 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VN12_22070 nrtA; Nitrate transport protein NrtA precursor K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VN12_22075 cmpB; Bicarbonate transport system permease protein CmpB K15577 nrtB; nitrate/nitrite transport system permease protein
D VN12_22080 cmpD_2; Bicarbonate transport ATP-binding protein CmpD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VN12_01860 futA2; Iron uptake protein A2 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D VN12_16785 hypothetical protein K02011 afuB; iron(III) transport system permease protein
D VN12_22895 opuBB; Choline transport system permease protein OpuBB K05845 opuC; osmoprotectant transport system substrate-binding protein
D VN12_22900 opuBA; Choline transport ATP-binding protein OpuBA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D VN12_12775 NMT1/THI5 like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D VN12_11770 ssuC; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D VN12_11775 cmpD_1; Bicarbonate transport ATP-binding protein CmpD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D VN12_03615 malK_1; Maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VN12_16075 D-allose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D VN12_16070 rbsC; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VN12_16065 rbsA; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VN12_01000 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VN12_00990 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VN12_00995 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VN12_01730 pstS_1; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D VN12_18620 pstS_2; Phosphate-binding protein PstS precursor K02040 pstS; phosphate transport system substrate-binding protein
D VN12_18615 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VN12_18610 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VN12_18605 pstB; Phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VN12_24645 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VN12_24625 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D VN12_24630 leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein
D VN12_25725 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VN12_20525 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D VN12_21335 btuF; Vitamin B12-binding protein precursor K25034 btuF; cobalamin transport system substrate-binding protein
D VN12_21340 hmuU; Hemin transport system permease protein HmuU K25027 btuC; cobalamin transport system permease protein
D VN12_21345 yusV; putative siderophore transport system ATP-binding protein YusV K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D VN12_01710 troA; Periplasmic zinc-binding protein TroA precursor K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D VN12_23110 mntB_2; Manganese transport system membrane protein MntB K11708 troC; manganese/zinc/iron transport system permease protein
D VN12_16410 mntB_1; Manganese transport system membrane protein MntB K11709 troD; manganese/zinc/iron transport system permease protein
D VN12_01715 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D VN12_25850 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D VN12_25845 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VN12_11470 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D VN12_23695 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D VN12_13325 lptB; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VN12_01275 ABC-2 family transporter protein K09696 natB; sodium transport system permease protein
D VN12_03180 ABC-2 family transporter protein K09696 natB; sodium transport system permease protein
D VN12_01280 ybhF_1; putative ABC transporter ATP-binding protein YbhF K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D VN12_03175 ybhF_3; putative ABC transporter ATP-binding protein YbhF K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D VN12_17970 ABC-type uncharacterized transport system K25151 gldF; gliding motility-associated transport system permease protein
D VN12_17975 yxlF_5; putative ABC transporter ATP-binding protein YxlF K25152 gldA; gliding motility-associated transport system ATP-binding protein
D VN12_13770 ABC-2 family transporter protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D VN12_13765 drrA_3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D VN12_09255 ABC-2 family transporter protein K25147 berB; beta-exotoxin I transport system permease protein
D VN12_11900 ytrB; ABC transporter ATP-binding protein YtrB K25148 berA; beta-exotoxin I transport system ATP-binding protein
D VN12_23635 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein
D VN12_17230 lolD_3; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VN12_23640 lolD_4; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VN12_02775 FtsX-like permease family protein K25169 devC; DevC family ABC transport system permease protein
D VN12_07520 FtsX-like permease family protein K25169 devC; DevC family ABC transport system permease protein
D VN12_10320 macB_4; Macrolide export ATP-binding/permease protein MacB K25170 devA; DevA family ABC transport system ATP-binding protein
D VN12_10315 hypothetical protein K25171 devB; membrane fusion protein DevB
D VN12_10420 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D VN12_01745 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D VN12_01740 ybhF_2; putative ABC transporter ATP-binding protein YbhF K25156 evrA; viologen exporter family transport system ATP-binding protein
D VN12_02960 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VN12_08775 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VN12_10065 yhhJ; Inner membrane transport permease YhhJ K01992 ABC-2.P; ABC-2 type transport system permease protein
D VN12_11200 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VN12_02955 drrA_1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_02965 yxlF_1; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_08610 yxlF_2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_08780 drrA_2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_11280 nikO; Nickel import ATP-binding protein NikO K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_15865 yxlF_3; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_16390 yxlF_4; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_17295 Fluoroquinolones export ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_21120 drrA_4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_21670 yxlF_6; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_25635 yxlF_7; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VN12_05470 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_05480 macB_1; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_05760 macB_2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_05780 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_08715 macB_3; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_10455 ytrF_1; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_10635 ytrF_2; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_15760 macB_5; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_16010 ytrF_3; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_16120 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_20960 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VN12_05475 bceA_1; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_05490 lolD_1; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_05765 ytrE; ABC transporter ATP-binding protein YtrE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_10460 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_10630 lolD_2; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_15765 macB_6; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_16125 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_20955 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VN12_27025 yurY; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D VN12_18045 sdcS; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VN12_12120 norM; Multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D VN12_01870 sauU; putative sulfoacetate transporter SauU K03535 gudP; MFS transporter, ACS family, glucarate transporter
D VN12_21390 dgoT_2; D-galactonate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D VN12_15680 tetA; Tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D VN12_10750 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VN12_10755 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VN12_10760 fruA; PTS system fructose-specific EIIABC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VN12_16290 aqpZ; Aquaporin Z K09874 NIP; aquaporin NIP
D VN12_18655 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D VN12_22040 kefC; Glutathione-regulated potassium-efflux system protein KefC K10716 kch; voltage-gated potassium channel
D VN12_15180 Ion transport protein K08714 VGSC; voltage-gated sodium channel
D VN12_06765 nrgA; Ammonium transporter NrgA K03320 amt; ammonium transporter, Amt family
D VN12_01265 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D VN12_09750 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D VN12_09755 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D VN12_12300 von Willebrand factor K07114 yfbK; Ca-activated chloride channel homolog
D VN12_21420 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D VN12_09240 mscM; Miniconductance mechanosensitive channel MscM precursor K05802 mscK; potassium-dependent mechanosensitive channel
D VN12_14015 mscS_2; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VN12_25655 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D VN12_26880 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D VN12_26875 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
D VN12_02610 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VN12_17350 exbB_1; Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VN12_21410 exbB_2; Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VN12_21940 exbB_3; Biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VN12_11465 exbD; Biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D VN12_17340 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D VN12_17345 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D VN12_20550 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D VN12_21405 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D VN12_25740 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D VN12_09220 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D VN12_07545 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VN12_15695 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VN12_05535 oprO; Porin O precursor K07221 oprO_P; phosphate-selective porin OprO and OprP
D VN12_13035 oprP_1; Porin P precursor K07221 oprO_P; phosphate-selective porin OprO and OprP
D VN12_21950 oprP_2; Porin P precursor K07221 oprO_P; phosphate-selective porin OprO and OprP
D VN12_05795 czcC_1; Cobalt-zinc-cadmium resistance protein CzcC precursor K15725 czcC; outer membrane protein, heavy metal efflux system
D VN12_08900 czcC_2; Cobalt-zinc-cadmium resistance protein CzcC precursor K15725 czcC; outer membrane protein, heavy metal efflux system
D VN12_15510 czcC_3; Cobalt-zinc-cadmium resistance protein CzcC precursor K15725 czcC; outer membrane protein, heavy metal efflux system
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_02545 oprM_1; Outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D VN12_10080 oprM_2; Outer membrane protein OprM precursor K18904 nodT; outer membrane protein, multidrug efflux system
D VN12_02845 Carbohydrate-selective porin, OprB family K07267 oprB; porin
D VN12_03830 bamA; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family
D VN12_03835 tamA; Translocation and assembly module TamA precursor K07277 SAM50; outer membrane protein insertion porin family
D VN12_01780 afsK_1; Serine/threonine-protein kinase AfsK K17713 bamB; outer membrane protein assembly factor BamB
D VN12_04490 outer membrane biogenesis protein BamB K17713 bamB; outer membrane protein assembly factor BamB
D VN12_08785 bamB_3; Outer membrane protein assembly factor BamB precursor K17713 bamB; outer membrane protein assembly factor BamB
D VN12_15795 outer membrane biogenesis protein BamB K17713 bamB; outer membrane protein assembly factor BamB
D VN12_05685 czcA_3; Cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein
D VN12_05810 czcA_4; Cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein
D VN12_08885 czcA_5; Cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein
D VN12_18250 czcA_6; Cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein
D VN12_11515 mexB; Multidrug resistance protein MexB K18299 mexF; multidrug efflux pump
D VN12_14575 ttgB; putative efflux pump membrane transporter TtgB K18303 mexK; multidrug efflux pump
D VN12_01590 mdtC_1; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_02550 bepE_2; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_03170 mdtC_2; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_03595 bepE_3; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_07180 mdtB; Multidrug resistance protein MdtB K18138 acrB; multidrug efflux pump
D VN12_22310 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D VN12_12895 sugE; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VN12_24385 EamA-like transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D VN12_02455 EamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D VN12_05375 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D VN12_20015 idnT; Gnt-II system L-idonate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VN12_04910 yrbG_1; Inner membrane protein YrbG K07301 yrbG; cation:H+ antiporter
D VN12_14020 yrbG_2; Inner membrane protein YrbG K07301 yrbG; cation:H+ antiporter
D VN12_12220 actP_3; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D VN12_12290 nhaK; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D VN12_22035 nhaP; K(+)/H(+) antiporter NhaP K11105 cvrA; potassium/hydrogen antiporter
D VN12_04790 ybaL; Inner membrane protein YbaL K26735 KEA4_5_6; K+:H+ antiporter
D VN12_17505 nhaS3; High-affinity Na(+)/H(+) antiporter NhaS3 K26731 CHX; K+:H+ antiporter
D VN12_23715 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VN12_02910 putative voltage-gated ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family
D VN12_19880 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D VN12_25265 dauA_2; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D VN12_23300 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D VN12_01795 Membrane transport protein K24180 mleP; malate permease and related proteins
D VN12_00710 potassium transport protein Kup K03549 kup; KUP system potassium uptake protein
D VN12_08020 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D VN12_17655 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D VN12_05690 czcB_1; Cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D VN12_05805 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D VN12_08890 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D VN12_18245 czcB_2; Cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D VN12_11520 bepF; Efflux pump periplasmic linker BepF K18298 mexE; membrane fusion protein, multidrug efflux system
D VN12_14580 mdtA_4; Multidrug resistance protein MdtA precursor K18302 mexJ; membrane fusion protein, multidrug efflux system
D VN12_01585 macA_1; Macrolide export protein MacA K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_02555 ttgA; putative efflux pump periplasmic linker TtgA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_03600 mdtA_1; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_07185 mdtA_3; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_23840 mdtA_5; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_25870 ywqD; Tyrosine-protein kinase YwqD K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VN12_14210 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D VN12_14215 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D VN12_14220 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VN12_08300 TspO/MBR family protein K05770 TSPO; translocator protein
D VN12_08275 pqiA; Paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D VN12_08280 pqiB; Paraquat-inducible protein B K06192 pqiB; intermembrane transport protein PqiB/LetB
D VN12_13685 putative Mg(2+) transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D VN12_01135 hypothetical protein K00389 yidH; inner membrane protein YidH
C 02044 Secretion system [BR:pir02044]
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_00480 xpsE_1; Type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VN12_00475 gspF_1; Putative type II secretion system protein F K02455 gspF; general secretion pathway protein F
D VN12_00470 xcpT_1; Type II secretion system protein G precursor K02456 gspG; general secretion pathway protein G
D VN12_00465 hypothetical protein K02457 gspH; general secretion pathway protein H
D VN12_00460 hypothetical protein K02458 gspI; general secretion pathway protein I
D VN12_03465 epsE_2; Type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D VN12_03480 xpsE_2; Type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D VN12_03460 gspF_2; Putative type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D VN12_01300 pilT_1; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D VN12_03470 pilT_2; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D VN12_16910 pilT_3; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D VN12_06750 Type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VN12_17275 SAF domain protein K02279 cpaB; pilus assembly protein CpaB
D VN12_17270 xpsD; Type II secretion system protein D precursor K02280 cpaC; pilus assembly protein CpaC
D VN12_17265 minD; Septum site-determining protein MinD K02282 cpaE; pilus assembly protein CpaE
D VN12_22225 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VN12_22220 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D VN12_22215 Bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C
D VN12_01260 TadE-like protein K12513 tadE; tight adherence protein E
D VN12_01270 TadE-like protein K12513 tadE; tight adherence protein E
D VN12_03205 TadE-like protein K12513 tadE; tight adherence protein E
D VN12_03215 TadE-like protein K12513 tadE; tight adherence protein E
D VN12_12160 TadE-like protein K12513 tadE; tight adherence protein E
D VN12_03185 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D VN12_06740 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D VN12_12350 ComEC family competence protein K02238 comEC; competence protein ComEC
D VN12_12435 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VN12_17450 flhB; Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VN12_16825 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D VN12_14145 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D VN12_14140 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VN12_19210 fliN_1; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_23800 fliN_2; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_23805 Flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D VN12_17435 fliP; Flagellar biosynthetic protein FliP precursor K02419 fliP; flagellar biosynthesis protein FliP
D VN12_17440 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VN12_17445 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VN12_15315 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VN12_15310 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D VN12_15255 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D VN12_15260 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D VN12_15265 25-like lysozyme protein K11897 impF; type VI secretion system protein ImpF
D VN12_15285 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D VN12_15290 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D VN12_15295 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D VN12_15275 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VN12_15280 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VN12_15160 Phage-related baseplate assembly protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VN12_15250 clpB; Chaperone protein ClpB K11907 vasG; type VI secretion system protein VasG
D VN12_15270 ImpE protein K11898 impE; type VI secretion system protein ImpE
D VN12_02680 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_03150 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VN12_10700 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D VN12_18915 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VN12_01675 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VN12_20250 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D VN12_12040 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VN12_18510 ftsY_2; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D VN12_10705 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VN12_06850 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VN12_01770 sec-independent translocase K03116 tatA; sec-independent protein translocase protein TatA
D VN12_01775 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VN12_09140 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pir02042]
D VN12_07545 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VN12_15695 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VN12_12500 hemolysin-III related K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pir02022]
D VN12_06690 phoR; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VN12_03335 phoB; Phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VN12_21965 cusS_2; Sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VN12_21960 copR; Transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VN12_25095 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VN12_25090 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VN12_05350 cusS_1; Sensor kinase CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D VN12_05355 czcR_1; Transcriptional activator protein CzcR K02483 K02483; two-component system, OmpR family, response regulator
D VN12_16860 nreC_1; Oxygen regulatory protein NreC K07696 nreC; two-component system, NarL family, response regulator NreC
D VN12_17740 ntrC_1; Nitrogen assimilation regulatory protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VN12_22060 ntrC_2; Nitrogen assimilation regulatory protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VN12_02560 zraS_1; Sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VN12_09110 zraS_3; Sensor protein ZraS K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D VN12_09115 zraR_6; Transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG
D VN12_02570 zraR_2; Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VN12_09495 zraR_7; Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VN12_21235 zraR_11; Transcriptional regulatory protein ZraR K07714 atoC; two-component system, NtrC family, response regulator AtoC
D VN12_14095 tmoS; Sensor histidine kinase TmoS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VN12_00575 cheA_1; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_03060 cheA_3; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_04940 cheA_4; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_25205 cheA_5; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_00565 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_25190 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_00585 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05230 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_25185 cheB_2; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05235 luxQ_4; Autoinducer 2 sensor kinase/phosphatase LuxQ K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D VN12_06790 fixL_2; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D VN12_19255 fixL_4; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D VN12_01140 regB; Sensor histidine kinase RegB K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D VN12_10255 regA; Photosynthetic apparatus regulatory protein RegA K15012 regA; two-component system, response regulator RegA
C 02035 Bacterial motility proteins [BR:pir02035]
D VN12_00575 cheA_1; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_03060 cheA_3; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_04940 cheA_4; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_25205 cheA_5; Chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VN12_00580 cheW_1; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_04950 cheV; Chemotaxis protein CheV K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_25220 cheW_2; Chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VN12_00560 hypothetical protein K03409 cheX; chemotaxis protein CheX
D VN12_25200 hypothetical protein K03410 cheC; chemotaxis protein CheC
D VN12_25195 cheD; Chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D VN12_00590 cheR2_1; Chemotaxis protein methyltransferase Cher2 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VN12_25210 cheR2_2; Chemotaxis protein methyltransferase Cher2 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VN12_00585 cheB1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05230 cheB_1; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_25185 cheB_2; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VN12_05235 luxQ_4; Autoinducer 2 sensor kinase/phosphatase LuxQ K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D VN12_00565 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_25190 cheY_2; Chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VN12_04475 bdlA_1; Biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D VN12_12440 ctpH; Methyl-accepting chemotaxis protein CtpH K03406 mcp; methyl-accepting chemotaxis protein
D VN12_25215 bdlA_2; Biofilm dispersion protein BdlA K03406 mcp; methyl-accepting chemotaxis protein
D VN12_14145 flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH
D VN12_14140 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VN12_14135 flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D VN12_23805 Flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D VN12_17435 fliP; Flagellar biosynthetic protein FliP precursor K02419 fliP; flagellar biosynthesis protein FliP
D VN12_17440 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VN12_17445 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VN12_12435 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VN12_17450 flhB; Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VN12_03845 fliG_1; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VN12_14150 fliG_2; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VN12_23880 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VN12_19210 fliN_1; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_23800 fliN_2; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VN12_16825 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D VN12_18185 flgI; Flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D VN12_17150 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VN12_17145 flgH; Flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D VN12_16820 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VN12_14125 Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VN12_21800 flgB; Flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VN12_16815 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VN12_25665 flgD; Basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VN12_17160 flgG_2; Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D VN12_17155 flgG_1; Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VN12_25670 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VN12_02660 flgK; Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D VN12_02655 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VN12_11475 fliC; B-type flagellin K02406 fliC; flagellin
D VN12_11480 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D VN12_09515 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VN12_19290 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VN12_26880 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D VN12_26875 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
D VN12_19015 fliW; Flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D VN12_06645 Anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VN12_01300 pilT_1; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D VN12_03470 pilT_2; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D VN12_16910 pilT_3; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D VN12_03465 epsE_2; Type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D VN12_03480 xpsE_2; Type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D VN12_03460 gspF_2; Putative type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D VN12_03185 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D VN12_06740 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D VN12_06750 Type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VN12_17275 SAF domain protein K02279 cpaB; pilus assembly protein CpaB
D VN12_17270 xpsD; Type II secretion system protein D precursor K02280 cpaC; pilus assembly protein CpaC
D VN12_17265 minD; Septum site-determining protein MinD K02282 cpaE; pilus assembly protein CpaE
D VN12_22225 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pir04812]
D VN12_02750 soj_1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D VN12_06625 soj_2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D VN12_23425 soj_3; Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein
D VN12_06620 spo0C_1; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_08160 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_23420 parB; Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VN12_24260 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pir04147]
D VN12_07250 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VN12_00505 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VN12_01750 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VN12_19440 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VN12_00215 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VN12_11755 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VN12_21465 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VN12_18275 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19110 groL5_1; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_19120 groL5_2; 60 kDa chaperonin 5 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VN12_21975 dnaK_3; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VN12_13670 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VN12_04980 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_12595 ptpA_3; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_14705 ptpA_4; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_03780 gnl_1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_17095 gnl_2; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_22385 gnl_4; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D VN12_15030 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VN12_18925 tufA; Elongation factor Tu K02358 tuf; elongation factor Tu
D VN12_23735 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VN12_07440 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VN12_10450 lcfB_1; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D VN12_03740 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D VN12_20245 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VN12_23850 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VN12_02770 argH1; Argininosuccinate lyase 1 K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VN12_10440 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VN12_17070 metC_2; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D VN12_09180 glgB_1; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VN12_13870 glgB_2; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VN12_18665 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VN12_12865 glnA; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_17660 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VN12_03725 hemB_1; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VN12_24640 hemB_2; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VN12_11780 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VN12_14890 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VN12_11415 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VN12_08960 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_09535 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VN12_07740 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D VN12_09710 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VN12_02745 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pir02048]
D VN12_06250 type I restriction enzyme EcoKI subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VN12_23480 hsdR; Type-1 restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VN12_06260 EcoKI restriction-modification system protein HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VN12_23470 EcoKI restriction-modification system protein HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VN12_06255 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VN12_08115 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VN12_23465 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VN12_04065 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VN12_16905 yhdJ_2; DNA adenine methyltransferase YhdJ K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D VN12_08465 type I restriction enzyme EcoKI subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5]
D VN12_08460 mboIIM; Modification methylase MboII K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D VN12_05390 Plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D VN12_05395 parD1; Antitoxin ParD1 K07746 parD1_3_4; antitoxin ParD1/3/4
D VN12_13570 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_20995 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VN12_03860 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VN12_18255 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules [BR:pir04515]
C 04090 CD molecules [BR:pir04090]
D VN12_04980 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_12595 ptpA_3; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D VN12_14705 ptpA_4; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:pir01504]
D VN12_15680 tetA; Tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D VN12_05145 vatD; Streptogramin A acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D VN12_12610 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_13785 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_22690 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D VN12_21965 cusS_2; Sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VN12_21960 copR; Transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VN12_14595 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D VN12_01585 macA_1; Macrolide export protein MacA K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_02555 ttgA; putative efflux pump periplasmic linker TtgA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_03600 mdtA_1; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_07185 mdtA_3; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_23840 mdtA_5; Multidrug resistance protein MdtA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D VN12_01590 mdtC_1; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_02550 bepE_2; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_03170 mdtC_2; Multidrug resistance protein MdtC K18138 acrB; multidrug efflux pump
D VN12_03595 bepE_3; Efflux pump membrane transporter BepE K18138 acrB; multidrug efflux pump
D VN12_07180 mdtB; Multidrug resistance protein MdtB K18138 acrB; multidrug efflux pump
D VN12_22310 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D VN12_02545 oprM_1; Outer membrane protein OprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
D VN12_11520 bepF; Efflux pump periplasmic linker BepF K18298 mexE; membrane fusion protein, multidrug efflux system
D VN12_11515 mexB; Multidrug resistance protein MexB K18299 mexF; multidrug efflux pump
D VN12_14580 mdtA_4; Multidrug resistance protein MdtA precursor K18302 mexJ; membrane fusion protein, multidrug efflux system
D VN12_14575 ttgB; putative efflux pump membrane transporter TtgB K18303 mexK; multidrug efflux pump
D VN12_09235 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12225 Outer membrane efflux protein K12340 tolC; outer membrane protein
D VN12_12670 hypothetical protein K12340 tolC; outer membrane protein
D VN12_15185 Outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pir00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pir00537]
D VN12_11755 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D VN12_21465 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pir03100]
D VN12_08950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VN12_12645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VN12_01545 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_11000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_14325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_14650 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_24860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_24925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VN12_06555 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VN12_01940 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VN12_22600 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VN12_08770 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VN12_24825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VN12_24830 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VN12_10605 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VN12_05110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_12825 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_18935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_24800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_24820 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VN12_18315 tRNA-His K14226 tRNA-His; tRNA His
D VN12_12650 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VN12_09905 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_10280 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D VN12_16740 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_18600 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_22010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24870 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VN12_24890 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D VN12_19275 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VN12_23895 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VN12_24780 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VN12_23980 tRNA-Met K14230 tRNA-Met; tRNA Met
D VN12_26855 tRNA-Met K14230 tRNA-Met; tRNA Met
D VN12_20620 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VN12_04050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VN12_11140 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VN12_23585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VN12_11725 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_19850 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_22890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_23245 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VN12_17795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VN12_18930 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VN12_18945 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VN12_18920 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VN12_18940 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VN12_07040 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_11225 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_24845 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_24905 tRNA-Val K14237 tRNA-Val; tRNA Val
D VN12_14550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VN12_12640 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VN12_12635 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VN12_08240 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VN12_21925 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D VN12_15705 Ferredoxin--NADP reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D VN12_27080 mrsA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VN12_00510 ccpA_1; Cytochrome c551 peroxidase precursor K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VN12_25075 ccpA_2; Cytochrome c551 peroxidase precursor K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VN12_05300 ydbD; putative manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D VN12_05260 cpo; Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D VN12_09250 bcp; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VN12_20600 thiol-disulfide oxidoreductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VN12_01915 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VN12_08565 yhhW; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VN12_08560 hmp_1; Flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VN12_12505 Fatty acid desaturase K23036 desC2; sn-2 palmitoyl-lipid 9-desaturase [EC:1.14.19.27]
D VN12_08975 fpr; Ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D VN12_23305 arsC; Protein ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D VN12_16970 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VN12_17605 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VN12_25980 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D VN12_13025 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D VN12_11405 fabH_3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D VN12_16310 deoxyhypusine synthase-like protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D VN12_01410 AIR carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D VN12_12525 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VN12_12745 hypothetical protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]
D VN12_00845 apbE_1; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VN12_04605 apbE_2; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VN12_08095 apbE_3; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VN12_17215 apbE_4; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VN12_19075 apbE_5; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VN12_00610 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VN12_03980 ltrA_1; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_05445 ltrA_2; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_06285 ltrA_3; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_08725 ltrA_4; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_08730 ltrA_5; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_10655 ltrA_6; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_11135 ltrA_7; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_11630 ltrA_8; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_19485 ltrA_9; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_24315 ltrA_10; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_24685 ltrA_11; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_24750 ltrA_12; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VN12_09800 disA; DNA integrity scanning protein DisA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D VN12_00365 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VN12_07315 Putative ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D VN12_12430 Sulfotransferase domain protein K22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40]
D VN12_01840 hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D VN12_25285 ymdB; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D VN12_09605 hypothetical protein K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D VN12_22240 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VN12_11595 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D VN12_03285 hypothetical protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D VN12_21660 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VN12_14610 Endonuclease/Exonuclease/phosphatase family protein K11995 DNASE1L; deoxyribonuclease-1-like protein [EC:3.1.21.-]
D VN12_02620 def1; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VN12_01705 mshB_1; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D VN12_08955 mshB_2; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D VN12_09600 galB_1; 4-oxalmesaconate hydratase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D VN12_14905 galB_2; 4-oxalmesaconate hydratase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D VN12_03905 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_09770 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_11500 ravA_1; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_11865 nirQ; Denitrification regulatory protein NirQ K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_13145 Holliday junction DNA helicase RuvB K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_13400 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_14445 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_14515 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_15395 ravA_2; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_16130 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_16350 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_19900 ravA_3; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_21695 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VN12_07650 ywlE; Low molecular weight protein-tyrosine-phosphatase YwlE K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D VN12_15475 salL; Adenosyl-chloride synthase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D VN12_03410 dhmA; Haloalkane dehalogenase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D VN12_00330 uxaA; Altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D VN12_09145 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D VN12_11290 yesW; Rhamnogalacturonan endolyase YesW precursor K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D VN12_11055 psdht; Phenylserine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D VN12_02725 tRNA-specific 2-thiouridylase MnmA K06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]
D VN12_17365 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D VN12_27065 D-ribose pyranase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D VN12_14195 D-tagatose 3-epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D VN12_12860 lcfB_2; Long-chain-fatty-acid--CoA ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D VN12_09645 cphA_1; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D VN12_19140 cphA_2; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D VN12_02935 rtcA; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D VN12_06805 copA; Copper-exporting P-type ATPase A K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D VN12_16085 ctpF; putative cation-transporting ATPase F K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D VN12_05825 cadA; putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D VN12_17035 zosA; Zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D VN12_12655 fdxA; Ferredoxin-1 K05524 fdxA; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D VN12_01045 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VN12_03115 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D VN12_09360 ybhN; Inner membrane protein YbhN K07027 K07027; glycosyltransferase 2 family protein
D VN12_25550 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D VN12_02375 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D VN12_08015 DoxX K15977 K15977; putative oxidoreductase
D VN12_18420 Phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VN12_22015 glnB_3; Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VN12_25900 glnB_4; Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VN12_19430 yugI; General stress protein 13 K06959 tex; protein Tex
D VN12_21890 rpsA_2; 30S ribosomal protein S1 K06959 tex; protein Tex
C 99974 Translation
D VN12_10070 ybhF_4; putative ABC transporter ATP-binding protein YbhF K13926 rbbA; ribosome-dependent ATPase
D VN12_13680 Ribonuclease K07576 K07576; metallo-beta-lactamase family protein
D VN12_18755 Ribonuclease K07576 K07576; metallo-beta-lactamase family protein
D VN12_01835 Ribonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D VN12_20570 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D VN12_07310 UvrB/uvrC motif protein K19411 mcsA; protein arginine kinase activator
D VN12_12830 tig; Trigger factor K03545 tig; trigger factor
D VN12_10625 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D VN12_08385 comM_1; Competence protein ComM K07391 comM; magnesium chelatase family protein
D VN12_08530 comM_2; Competence protein ComM K07391 comM; magnesium chelatase family protein
D VN12_13210 hypothetical protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D VN12_24285 hypothetical protein K07445 K07445; putative DNA methylase
D VN12_24290 hypothetical protein K07445 K07445; putative DNA methylase
D VN12_24585 hypothetical protein K07445 K07445; putative DNA methylase
D VN12_19315 hypothetical protein K03630 radC; DNA repair protein RadC
D VN12_16035 hypothetical protein K07460 yraN; putative endonuclease
D VN12_11550 hypothetical protein K04096 smf; DNA processing protein
D VN12_26315 hypothetical protein K04096 smf; DNA processing protein
D VN12_21505 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D VN12_05655 Zinc-binding domain of primase-helicase K06919 K06919; putative DNA primase/helicase
D VN12_24430 hypothetical protein K06919 K06919; putative DNA primase/helicase
D VN12_22490 putative 3'-5' exonuclease related to the exonuclease domain of PolB K07501 K07501; 3'-5' exonuclease
D VN12_21295 Transposase K07483 K07483; transposase
D VN12_26395 hypothetical protein K07483 K07483; transposase
D VN12_00420 Transposase IS66 family protein K07484 K07484; transposase
D VN12_16800 Transposase IS66 family protein K07484 K07484; transposase
D VN12_25700 Transposase IS66 family protein K07484 K07484; transposase
D VN12_26420 Transposase IS66 family protein K07484 K07484; transposase
D VN12_26425 IS66 Orf2 like protein K07484 K07484; transposase
D VN12_08520 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D VN12_26435 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D VN12_03420 Transposase IS200 like protein K07491 rayT; REP-associated tyrosine transposase
D VN12_17005 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D VN12_22845 Transposase, Mutator family K07493 K07493; putative transposase
D VN12_00090 Transposase K07497 K07497; putative transposase
D VN12_00095 IS2 transposase TnpB K07497 K07497; putative transposase
D VN12_04015 IS2 transposase TnpB K07497 K07497; putative transposase
D VN12_04020 Transposase K07497 K07497; putative transposase
D VN12_05465 Integrase core domain protein K07497 K07497; putative transposase
D VN12_05620 Integrase core domain protein K07497 K07497; putative transposase
D VN12_09655 IS2 transposase TnpB K07497 K07497; putative transposase
D VN12_09660 Transposase K07497 K07497; putative transposase
D VN12_21290 IS2 transposase TnpB K07497 K07497; putative transposase
D VN12_25320 Transposase K07497 K07497; putative transposase
D VN12_25325 IS2 transposase TnpB K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D VN12_22510 pspA_2; Phage shock protein A K03969 pspA; phage shock protein A
D VN12_18195 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VN12_01385 yhdG_1; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D VN12_07540 yhdG_2; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D VN12_18775 steT_1; Serine/threonine exchanger SteT K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D VN12_25070 yhdG_3; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D VN12_25795 steT_2; Serine/threonine exchanger SteT K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D VN12_02340 dtpD; Dipeptide permease D K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VN12_04855 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D VN12_01390 sglT_1; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D VN12_01125 alsT; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VN12_02730 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D VN12_08265 nupX; Nucleoside permease NupX K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D VN12_06925 ykvP; Spore protein YkvP K06320 cgeB; spore maturation protein CgeB
D VN12_00160 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D VN12_06220 hin_1; DNA-invertase hin K06400 spoIVCA; site-specific DNA recombinase
D VN12_08215 hin_2; DNA-invertase hin K06400 spoIVCA; site-specific DNA recombinase
D VN12_24005 hin_4; DNA-invertase hin K06400 spoIVCA; site-specific DNA recombinase
D VN12_24335 hin_5; DNA-invertase hin K06400 spoIVCA; site-specific DNA recombinase
D VN12_24705 hin_6; DNA-invertase hin K06400 spoIVCA; site-specific DNA recombinase
D VN12_19310 spoVG; Putative septation protein SpoVG K06412 spoVG; stage V sporulation protein G
D VN12_14880 Cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
C 99993 Cell motility
C 99995 Signaling proteins
D VN12_13370 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D VN12_03290 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D VN12_10075 macA_3; Macrolide export protein MacA K01993 ABC-2.TX; HlyD family secretion protein
D VN12_05770 mdtA_2; Multidrug resistance protein MdtA precursor K02005 ABC.CD.TX; HlyD family secretion protein
D VN12_08720 macA_2; Macrolide export protein MacA K02005 ABC.CD.TX; HlyD family secretion protein
D VN12_15770 macrolide transporter subunit MacA K02005 ABC.CD.TX; HlyD family secretion protein
D VN12_16115 putative efflux pump membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D VN12_20950 macA_4; Macrolide export protein MacA K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D VN12_03330 hypothetical protein K02039 phoU; phosphate transport system protein
D VN12_07660 cutA; Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D VN12_14835 cutC; Copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VN12_18720 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D VN12_09090 ygjH; tRNA-binding protein YgjH K06878 K06878; tRNA-binding protein
D VN12_10060 rssA_1; NTE family protein RssA K07001 K07001; NTE family protein
D VN12_10110 rssA_2; NTE family protein RssA K07001 K07001; NTE family protein
D VN12_21865 erpA; Iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D VN12_27030 sufB_1; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D VN12_27035 sufB_2; FeS cluster assembly protein SufB K09015 sufD; Fe-S cluster assembly protein SufD
D VN12_06680 hypothetical protein K07058 K07058; membrane protein
D VN12_12495 rluD_2; Ribosomal large subunit pseudouridine synthase D K07146 K07146; UPF0176 protein
D VN12_21205 yqjA; Inner membrane protein YqjA K03975 dedA; membrane-associated protein
D VN12_26070 hypothetical protein K08976 K08976; putative membrane protein
D VN12_17620 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D VN12_08050 Cupin domain protein K11312 K11312; cupin 2 domain-containing protein
D VN12_10535 ykgB; Inner membrane protein YkgB K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D VN12_20035 ankX; Phosphocholine transferase AnkX K06867 K06867; uncharacterized protein
D VN12_08740 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K06885 K06885; uncharacterized protein
D VN12_06670 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D VN12_23860 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D VN12_05135 hypothetical protein K06929 K06929; uncharacterized protein
D VN12_03155 Flagellin N-methylase K06940 K06940; uncharacterized protein
D VN12_13560 Flagellin N-methylase K06940 K06940; uncharacterized protein
D VN12_13945 putative hydrolase K06950 K06950; uncharacterized protein
D VN12_01805 hypothetical protein K06953 K06953; uncharacterized protein
D VN12_18150 YacP-like NYN domain protein K06962 K06962; uncharacterized protein
D VN12_21105 Putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D VN12_05050 cocE; Cocaine esterase K06978 K06978; uncharacterized protein
D VN12_00010 Glyoxalase-like domain protein K06996 K06996; uncharacterized protein
D VN12_21490 YCII-related domain protein K06996 K06996; uncharacterized protein
D VN12_14205 MMPL family protein K07003 K07003; uncharacterized protein
D VN12_16885 MMPL family protein K07003 K07003; uncharacterized protein
D VN12_21245 MMPL family protein K07003 K07003; uncharacterized protein
D VN12_03890 putative hydrolase K07019 K07019; uncharacterized protein
D VN12_25950 Glyoxalase-like domain protein K07032 K07032; uncharacterized protein
D VN12_21310 TatD related DNase K07051 K07051; uncharacterized protein
D VN12_02625 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D VN12_14375 Epimerase family protein K07071 K07071; uncharacterized protein
D VN12_05210 putative nucleotidyltransferase K07074 K07074; uncharacterized protein
D VN12_05215 putative nucleotidyltransferase K07074 K07074; uncharacterized protein
D VN12_13135 putative permease K07089 K07089; uncharacterized protein
D VN12_13755 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D VN12_14645 hypothetical protein K07090 K07090; uncharacterized protein
D VN12_20425 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D VN12_15040 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D VN12_25840 fabG_9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K07124 K07124; uncharacterized protein
D VN12_08665 lon; Lon protease K07157 K07157; uncharacterized protein
D VN12_25750 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D VN12_12985 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D VN12_07245 hypothetical protein K08999 K08999; uncharacterized protein
D VN12_03320 hypothetical protein K09154 K09154; uncharacterized protein
D VN12_08330 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D VN12_17615 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D VN12_16755 hypothetical protein K09768 K09768; uncharacterized protein
D VN12_21930 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D VN12_06810 hypothetical protein K09792 K09792; uncharacterized protein
D VN12_12425 hypothetical protein K09793 K09793; uncharacterized protein
D VN12_03030 hypothetical protein K09822 K09822; uncharacterized protein
D VN12_26945 hypothetical protein K09822 K09822; uncharacterized protein
D VN12_25965 hypothetical protein K09859 K09859; uncharacterized protein
D VN12_21985 hypothetical protein K09915 K09915; uncharacterized protein
D VN12_00360 hypothetical protein K09922 K09922; uncharacterized protein
D VN12_05270 hypothetical protein K09932 K09932; uncharacterized protein
D VN12_08080 hypothetical protein K09939 K09939; uncharacterized protein
D VN12_21565 hypothetical protein K09942 K09942; uncharacterized protein
D VN12_08670 hypothetical protein K09966 K09966; uncharacterized protein
D VN12_24545 hypothetical protein K09981 K09981; uncharacterized protein
D VN12_04820 Cytochrome c K09992 K09992; uncharacterized protein
D VN12_11530 Trehalose utilization K09992 K09992; uncharacterized protein
D VN12_22305 Trehalose utilization K09992 K09992; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: October 10, 2025