+E Replication protein KO
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DNA Replication Proteins - Paenibacillus sp. JDR-2
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D Pjdr2_3850 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Pjdr2_3095 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Pjdr2_0805 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D Pjdr2_1600 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D Pjdr2_0049 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Pjdr2_2403 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Pjdr2_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Pjdr2_6259 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Pjdr2_1593 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Pjdr2_2243 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Pjdr2_4830 replication initiation and membrane attachment family protein K03346 dnaB; replication initiation and membrane attachment protein
D Pjdr2_4829 AAA ATPase K11144 dnaI; primosomal protein DnaI
D Pjdr2_6272 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E Pjdr2_4482 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E Pjdr2_3412 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
E Pjdr2_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E Pjdr2_2197 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E Pjdr2_0016 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E Pjdr2_2143 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E Pjdr2_0144 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E Pjdr2_3850 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Pjdr2_3095 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Pjdr2_0805 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Pjdr2_3474 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E Pjdr2_1523 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E Pjdr2_5719 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E Pjdr2_1409 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E Pjdr2_3850 ribonuclease H-related protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Pjdr2_3095 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Pjdr2_0805 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E Pjdr2_3474 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
C Pjdr2_0008 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C Pjdr2_0006 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C Pjdr2_2493 DNA gyrase, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C Pjdr2_2492 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C Pjdr2_3465 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C Pjdr2_4839 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C Pjdr2_2660 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022