+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Paenibacillus konkukensis

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ACRISPR-Cas system B Universal Cas proteins C SK3146_04781 cas4-cas1; CRISPR-associated protein Cas4/endonuclease Cas1 fusion K15342 cas1; CRISP-associated protein Cas1 C SK3146_04782 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D SK3146_04734 DEAD/DEAH box helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D SK3146_04776 cas3; CRISPR-associated nuclease/helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D SK3146_04780 PD-(D/E)XK nuclease superfamily protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D SK3146_04780 PD-(D/E)XK nuclease superfamily protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D SK3146_04736 CRISPR-associated protein (Cas_Csd1) K19117 csd1; CRISPR-associated protein Csd1 D SK3146_04778 CRISPR-associated protein (Cas_Csd1) K19117 csd1; CRISPR-associated protein Csd1 D SK3146_04737 hypothetical protein K19118 csd2; CRISPR-associated protein Csd2 D SK3146_04779 hypothetical protein K19118 csd2; CRISPR-associated protein Csd2 D SK3146_04780 PD-(D/E)XK nuclease superfamily protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D SK3146_04735 cas5_1; CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D SK3146_04777 cas5_2; CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d C Subtype I-D factors D SK3146_04780 PD-(D/E)XK nuclease superfamily protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D SK3146_04780 PD-(D/E)XK nuclease superfamily protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases B Type III R-M system C SK3146_03801 Type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C SK3146_03800 putative methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D SK3146_03151 ndoA_1; mRNA interferase EndoA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D SK3146_03891 mazF_1; mRNA interferase MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D SK3146_04795 mazF_2; mRNA interferase MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D SK3146_03494 SpoVT / AbrB like domain protein K07172 mazE; antitoxin MazE D SK3146_03890 SpoVT / AbrB like domain protein K07172 mazE; antitoxin MazE D SK3146_04794 mazE; Antitoxin MazE K07172 mazE; antitoxin MazE D SK3146_03152 ndoAI; Antitoxin EndoAI K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd D SK3146_03493 doc; Toxin Doc K07341 doc; death on curing protein C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C SpoIISA-SpoIISB C Tse6-Tsi6 C Type II TA system related factors D SK3146_06357 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SK3146_00634 mreB_1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D SK3146_03669 mreB_2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D SK3146_06042 mreB_3; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D SK3146_01018 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D SK3146_01019 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SK3146_05113 gltX1; Glutamate--tRNA ligase 1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB C AbiEii-AbiEi B Type V TA system C GhoT-GhoS C Other GhoT/OrtT toxin family protein B Type VI TA system C SocB-SocA B Type VII TA system C Hha-TomB C TglT-TakA C HepT-MntA B Type VIII TA system C SdsR-RyeA # ADNA phosphothiolation system B Sulfur modification proteins C SK3146_01703 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C SK3146_02770 iscS_2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C SK3146_06313 iscS_3; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2025