+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Parasalinivibrio latis

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E NF212_10700 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] E NF212_01795 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] E NF212_02715 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E NF212_01610 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] E NF212_01490 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E NF212_00225 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] E NF212_09630 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E NF212_22205 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E NF212_25085 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E NF212_24785 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E NF212_10085 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E NF212_16645 recQ; (GenBank) ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E NF212_02880 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E NF212_14165 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E NF212_00235 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho E NF212_00835 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E NF212_03805 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E NF212_06950 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK E NF212_15580 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E NF212_01560 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D Others E NF212_03985 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E NF212_04015 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E NF212_10920 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] E NF212_02290 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E NF212_14360 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] E NF212_02950 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator E NF212_01690 csrD; (GenBank) RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD E NF212_00915 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A E NF212_14515 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A E NF212_14780 rraB; (GenBank) ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B E NF212_01835 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ E NF212_09150 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] E NF212_02315 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 27, 2025