+D GENES KO #

  KEGG Orthology (KO) - Pseudomonas lijiangensis

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:plij00010] D KQP88_05070 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KQP88_03900 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KQP88_23420 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KQP88_02405 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KQP88_03810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D KQP88_05060 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KQP88_15070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KQP88_02385 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D KQP88_23955 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D KQP88_06175 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KQP88_19560 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D KQP88_14150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KQP88_02490 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D KQP88_02485 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D KQP88_19345 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_21005 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_10610 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_13300 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_14630 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_13315 cytochrome c K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_21360 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D KQP88_03895 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_06550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_11680 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_24575 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D KQP88_09875 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D KQP88_23910 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:plij00020] D KQP88_14565 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D KQP88_07985 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D KQP88_07340 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D KQP88_08840 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KQP88_08845 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KQP88_14540 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D KQP88_14535 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_14520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D KQP88_14525 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D KQP88_24445 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D KQP88_14550 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D KQP88_14545 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D KQP88_14560 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D KQP88_14555 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D KQP88_19580 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D KQP88_17850 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KQP88_20280 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KQP88_04395 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D KQP88_10170 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D KQP88_24665 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D KQP88_24660 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D KQP88_23910 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D KQP88_02490 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D KQP88_02485 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:plij00030] D KQP88_03900 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KQP88_05125 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KQP88_10965 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KQP88_05130 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D KQP88_06845 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D KQP88_07185 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D KQP88_11950 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D KQP88_10960 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D KQP88_03115 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D KQP88_02375 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KQP88_10255 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KQP88_10260 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KQP88_14980 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D KQP88_23585 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D KQP88_03990 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D KQP88_13855 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_09565 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D KQP88_04230 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D KQP88_05065 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D KQP88_05135 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D KQP88_09875 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D KQP88_19025 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D KQP88_07115 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_12465 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_04700 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D KQP88_15340 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D KQP88_04535 trxB; thioredoxin-disulfide reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9] D KQP88_02405 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KQP88_23420 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:plij00040] D KQP88_25030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_11000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_11005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KQP88_03115 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D KQP88_10630 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D KQP88_06970 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D KQP88_09235 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00051 Fructose and mannose metabolism [PATH:plij00051] D KQP88_10625 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D KQP88_04800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_15200 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_00695 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D KQP88_06785 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D KQP88_23420 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KQP88_20385 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D KQP88_06970 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D KQP88_10635 mannitol dehydrogenase family protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D KQP88_04855 nucleotide sugar dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D KQP88_04850 alg8; mannuronan synthase K19290 alg8; mannuronan synthase [EC:2.4.1.33] D KQP88_04845 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33] D KQP88_04830 algG; mannuronan 5-epimerase AlgG K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37] D KQP88_04820 mannuronate-specific alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D KQP88_02405 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KQP88_03810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D KQP88_00690 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D KQP88_20380 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D KQP88_17255 HAD-IA family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:plij00052] D KQP88_11680 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D KQP88_07280 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KQP88_21665 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KQP88_11005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_05070 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KQP88_07290 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D KQP88_14645 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D KQP88_14655 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D KQP88_14650 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] C 00053 Ascorbate and aldarate metabolism [PATH:plij00053] D KQP88_25030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_11000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_07115 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_12465 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_06785 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_24145 glucarate dehydratase family protein K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D KQP88_09435 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D KQP88_12580 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D KQP88_16225 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D KQP88_09235 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D KQP88_03520 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D KQP88_03530 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D KQP88_00615 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:plij00500] D KQP88_11005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KQP88_09275 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_12925 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_19370 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_10940 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D KQP88_11935 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D KQP88_23410 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D KQP88_11930 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D KQP88_10930 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D KQP88_11925 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D KQP88_10915 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D KQP88_10925 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D KQP88_10935 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_05070 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KQP88_03900 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KQP88_10625 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:plij00520] D KQP88_15095 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D KQP88_10625 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D KQP88_25065 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D KQP88_03805 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D KQP88_25075 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D KQP88_22005 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D KQP88_17800 mupP; N-acetylmuramic acid 6-phosphate phosphatase MupP K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D KQP88_03065 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D KQP88_03070 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D KQP88_20175 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D KQP88_16550 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D KQP88_19085 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D KQP88_05070 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_11005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KQP88_25030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_11000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_07280 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KQP88_21665 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KQP88_07290 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D KQP88_03900 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KQP88_04800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_15200 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_00695 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D KQP88_00690 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D KQP88_09150 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D KQP88_09160 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D KQP88_04855 nucleotide sugar dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D KQP88_01165 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:plij00620] D KQP88_03895 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_06550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_02490 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D KQP88_02485 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_19345 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_21005 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D KQP88_10610 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_13300 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_14630 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_13315 cytochrome c K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D KQP88_04490 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D KQP88_19560 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D KQP88_06155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KQP88_13655 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_13675 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_22355 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_13660 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KQP88_22360 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KQP88_16415 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KQP88_18900 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_21360 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D KQP88_24445 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D KQP88_18040 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D KQP88_03685 FAD-binding oxidoreductase K18930 dld; D-lactate dehydrogenase D KQP88_11075 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D KQP88_06725 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D KQP88_07540 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D KQP88_01320 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D KQP88_04700 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D KQP88_17250 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D KQP88_23235 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D KQP88_05570 oxaloacetate decarboxylase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112] D KQP88_24665 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D KQP88_24660 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D KQP88_04395 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D KQP88_10170 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D KQP88_19580 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D KQP88_17850 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KQP88_20280 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KQP88_05920 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D KQP88_23910 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D KQP88_14150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KQP88_15330 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D KQP88_22815 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_05575 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:plij00630] D KQP88_08800 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D KQP88_03895 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_06550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_15330 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D KQP88_22815 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D KQP88_14565 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D KQP88_07985 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D KQP88_07340 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_18480 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D KQP88_18900 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D KQP88_15310 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D KQP88_15315 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D KQP88_15320 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D KQP88_00225 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D KQP88_15445 katB; catalase KatB K03781 katE; catalase [EC:1.11.1.6] D KQP88_21725 catalase K03781 katE; catalase [EC:1.11.1.6] D KQP88_01320 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D KQP88_04700 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D KQP88_04450 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D KQP88_00340 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D KQP88_03120 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D KQP88_16535 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D KQP88_09140 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D KQP88_23680 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_23690 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01775 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_11155 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_16100 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_02240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_20830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_05015 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D KQP88_01270 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_05010 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_01275 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D KQP88_05020 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D KQP88_12950 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D KQP88_09455 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D KQP88_03600 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D KQP88_04085 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D KQP88_05135 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D KQP88_02265 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KQP88_11145 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KQP88_19495 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KQP88_23530 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:plij00640] D KQP88_03895 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_06550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_04490 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D KQP88_04585 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D KQP88_04590 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D KQP88_04595 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_13165 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_06155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KQP88_13655 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_13675 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_22355 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_13660 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KQP88_22360 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KQP88_16415 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KQP88_18900 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_03285 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D KQP88_14525 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D KQP88_14520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D KQP88_03290 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_08385 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_14170 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D KQP88_14165 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D KQP88_14160 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D KQP88_07340 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D KQP88_14175 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:plij00650] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_18480 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D KQP88_23280 phaC; class II poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D KQP88_23290 phaC; class II poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D KQP88_19465 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D KQP88_19460 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D KQP88_03600 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D KQP88_04085 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D KQP88_14550 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D KQP88_14545 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D KQP88_14560 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D KQP88_14555 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D KQP88_01445 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_23810 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_01440 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10525 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10225 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D KQP88_24445 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D KQP88_11835 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D KQP88_21695 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D KQP88_08560 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D KQP88_08555 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D KQP88_13505 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D KQP88_04025 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_18175 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_04030 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:plij00660] D KQP88_04025 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_18175 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_04030 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D KQP88_06960 substrate-binding domain-containing protein K22003 ais; aconitate Delta-isomerase [EC:5.3.3.7] D KQP88_14525 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D KQP88_14520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D KQP88_14685 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D KQP88_14680 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D KQP88_14670 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:plij00562] D KQP88_05455 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D KQP88_09845 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D KQP88_08400 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D KQP88_12945 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D KQP88_08390 TIM barrel protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D KQP88_08375 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D KQP88_08395 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D KQP88_08380 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D KQP88_08370 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D KQP88_03290 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_08385 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_03810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:plij00190] D KQP88_08795 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D KQP88_08790 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D KQP88_08785 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D KQP88_08780 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D KQP88_08775 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D KQP88_08770 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D KQP88_08765 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D KQP88_08760 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D KQP88_08755 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D KQP88_08750 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D KQP88_08745 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D KQP88_08740 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D KQP88_08735 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D KQP88_20600 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D KQP88_14550 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D KQP88_14545 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D KQP88_14560 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D KQP88_14555 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D KQP88_20095 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D KQP88_20090 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D KQP88_20085 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D KQP88_00255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_05255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_05250 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D KQP88_00280 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D KQP88_00290 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D KQP88_00295 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D KQP88_00285 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D KQP88_00260 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D KQP88_07915 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D KQP88_07935 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D KQP88_07910 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D KQP88_07930 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D KQP88_07905 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D KQP88_07925 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D KQP88_07900 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D KQP88_07920 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D KQP88_05245 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D KQP88_05240 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D KQP88_05235 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D KQP88_20910 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D KQP88_20905 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D KQP88_08305 c-type cytochrome K08738 CYC; cytochrome c D KQP88_25095 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D KQP88_25085 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D KQP88_25090 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D KQP88_25100 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D KQP88_25080 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D KQP88_25115 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D KQP88_25105 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D KQP88_25110 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D KQP88_21390 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D KQP88_01115 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:plij00680] D KQP88_02270 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D KQP88_06200 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D KQP88_02240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_20830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_04450 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D KQP88_06175 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KQP88_05920 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D KQP88_02405 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KQP88_23420 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KQP88_11160 glutamine amidotransferase family protein K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D KQP88_11165 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D KQP88_11170 FMN-binding glutamate synthase family protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D KQP88_04490 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D KQP88_03895 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_06550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_14150 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KQP88_23955 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D KQP88_23610 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_07135 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_17775 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D KQP88_02670 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D KQP88_14245 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:plij00910] D KQP88_09580 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D KQP88_09585 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D KQP88_09590 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D KQP88_14110 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D KQP88_09720 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D KQP88_14105 FAD-dependent oxidoreductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D KQP88_09715 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D KQP88_13175 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D KQP88_19535 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D KQP88_11770 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D KQP88_07265 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D KQP88_23680 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_23690 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01775 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_11155 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_16100 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01915 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D KQP88_01920 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D KQP88_00310 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D KQP88_04120 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:plij00920] D KQP88_15695 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D KQP88_01475 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D KQP88_01480 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D KQP88_01485 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D KQP88_01490 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D KQP88_23755 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D KQP88_23765 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein D KQP88_23760 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D KQP88_23715 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_23750 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_01545 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_01730 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_09255 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_11050 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_12635 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_13320 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_17515 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_23710 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D KQP88_01540 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D KQP88_09260 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D KQP88_12640 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D KQP88_23705 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_01535 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_09265 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_12645 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_08495 ssuD; FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D KQP88_17430 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D KQP88_08580 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D KQP88_20135 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D KQP88_20145 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D KQP88_03565 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D KQP88_24285 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D KQP88_14250 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D KQP88_03435 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D KQP88_10765 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D KQP88_00850 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D KQP88_01860 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D KQP88_03030 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D KQP88_01705 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_05465 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_06795 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_17145 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D KQP88_18555 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D KQP88_23145 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D KQP88_16390 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D KQP88_06715 sfnG; dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] D KQP88_22700 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D KQP88_22710 phenylacyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:plij00061] D KQP88_06155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KQP88_13655 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_13675 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_22355 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KQP88_13660 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KQP88_22360 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KQP88_16415 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KQP88_18900 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D KQP88_02030 acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_02035 acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_16135 acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_16495 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_16505 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D KQP88_12835 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_13425 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_15965 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_16120 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_01965 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D KQP88_14485 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D KQP88_01950 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_10215 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_16490 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_01955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_08315 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_16500 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_19800 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_22200 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_14480 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D KQP88_06130 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D KQP88_07505 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D KQP88_18470 fadD1; long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:plij00071] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_15135 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_11850 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D KQP88_16600 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D KQP88_24420 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D KQP88_18470 fadD1; long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D KQP88_10300 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D KQP88_24490 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D KQP88_19345 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_21005 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:plij00561] D KQP88_09455 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_10610 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_13300 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_14630 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KQP88_18830 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D KQP88_05980 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D KQP88_16510 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D KQP88_02995 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D KQP88_00040 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D KQP88_06285 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D KQP88_22580 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:plij00564] D KQP88_14470 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D KQP88_18840 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D KQP88_05980 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D KQP88_02995 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D KQP88_00040 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D KQP88_06285 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D KQP88_08520 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D KQP88_15040 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D KQP88_21365 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D KQP88_21370 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D KQP88_06100 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D KQP88_04155 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D KQP88_08515 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D KQP88_04040 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D KQP88_13440 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D KQP88_21560 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D KQP88_24760 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D KQP88_08350 clsB; cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D KQP88_00785 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:plij00592] D KQP88_15135 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:plij01040] D KQP88_01460 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D KQP88_14300 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D KQP88_20945 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D KQP88_24570 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:plij00230] D KQP88_02620 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D KQP88_24290 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_04230 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D KQP88_16395 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D KQP88_22390 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D KQP88_17995 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D KQP88_05725 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D KQP88_05685 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D KQP88_17990 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D KQP88_24590 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D KQP88_24595 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D KQP88_17275 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D KQP88_08820 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D KQP88_22385 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D KQP88_07845 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D KQP88_14265 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D KQP88_06215 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D KQP88_24295 yrfG; GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D KQP88_08015 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D KQP88_20635 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D KQP88_04365 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D KQP88_05600 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D KQP88_05510 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D KQP88_23160 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D KQP88_00860 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D KQP88_07735 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D KQP88_07730 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D KQP88_05605 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D KQP88_07720 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D KQP88_00535 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D KQP88_18140 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D KQP88_18170 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D KQP88_14055 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D KQP88_00525 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D KQP88_01120 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D KQP88_18020 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D KQP88_00985 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D KQP88_02770 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D KQP88_21135 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D KQP88_16155 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D KQP88_03185 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D KQP88_05925 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D KQP88_18015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D KQP88_02630 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D KQP88_22760 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D KQP88_03035 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D KQP88_20135 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D KQP88_03565 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D KQP88_20145 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D KQP88_11310 NAD(P)/FAD-dependent oxidoreductase K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D KQP88_07705 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D KQP88_07695 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D KQP88_16785 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D KQP88_07700 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D KQP88_07690 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D KQP88_07685 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D KQP88_22535 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D KQP88_22530 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D KQP88_22515 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:plij00240] D KQP88_03770 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D KQP88_03765 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D KQP88_23105 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D KQP88_23110 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D KQP88_18775 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D KQP88_14100 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D KQP88_00705 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D KQP88_08040 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D KQP88_06085 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D KQP88_05510 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D KQP88_18015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D KQP88_20320 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D KQP88_02115 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D KQP88_06165 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D KQP88_17760 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D KQP88_14265 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D KQP88_06215 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D KQP88_08015 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D KQP88_04360 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D KQP88_23100 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D KQP88_16155 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D KQP88_18335 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D KQP88_18700 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D KQP88_07050 deoxycytidine deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D KQP88_18140 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D KQP88_18170 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D KQP88_16475 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D KQP88_00730 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D KQP88_23550 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:plij00250] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_19160 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D KQP88_09670 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] D KQP88_24620 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D KQP88_05560 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D KQP88_17620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D KQP88_24610 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D KQP88_18765 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D KQP88_01005 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D KQP88_02770 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D KQP88_08820 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D KQP88_23105 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D KQP88_01445 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_23810 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_01440 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10525 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10225 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D KQP88_01915 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D KQP88_01920 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D KQP88_07265 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D KQP88_02095 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D KQP88_23680 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_23690 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01775 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_11155 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_16100 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_03770 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D KQP88_03765 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D KQP88_11020 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D KQP88_25065 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D KQP88_16395 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:plij00260] D KQP88_06640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KQP88_14665 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KQP88_05780 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D KQP88_00195 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D KQP88_14245 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D KQP88_05785 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D KQP88_02220 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D KQP88_06630 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D KQP88_02240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_20830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_04450 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D KQP88_01320 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D KQP88_04700 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D KQP88_09455 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D KQP88_23955 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D KQP88_23610 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_07135 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_17775 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D KQP88_02670 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D KQP88_17070 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_22895 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_05015 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D KQP88_01270 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_05010 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_01275 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D KQP88_05020 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D KQP88_08515 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D KQP88_04040 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D KQP88_02165 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D KQP88_02170 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D KQP88_02450 gbcA; glycine-betaine demethylase subunit GbcA K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D KQP88_02455 gbcB; glycine-betaine demethylase subunit GbcB K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D KQP88_02430 dgcA; dimethylglycine demethylation protein DgcA K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D KQP88_02435 dgcB; dimethylglycine demethylation protein DgcB K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D KQP88_02440 electron transfer flavoprotein subunit alpha/FixB family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D KQP88_02445 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D KQP88_09005 solA; N-methyl-L-tryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D KQP88_02255 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D KQP88_11125 (2Fe-2S)-binding protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D KQP88_02245 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D KQP88_11135 FAD-dependent oxidoreductase K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D KQP88_02260 sarcosine oxidase subunit gamma family protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D KQP88_11120 sarcosine oxidase K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D KQP88_02250 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D KQP88_11130 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D KQP88_06820 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D KQP88_23580 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D KQP88_16345 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D KQP88_12000 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D KQP88_00395 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D KQP88_00390 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D KQP88_12110 diaminobutyrate--2-oxoglutarate transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D KQP88_12495 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D KQP88_14915 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] C 00270 Cysteine and methionine metabolism [PATH:plij00270] D KQP88_01705 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_05465 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_06795 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_17145 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D KQP88_18555 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D KQP88_11660 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D KQP88_21530 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D KQP88_10780 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D KQP88_18925 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D KQP88_02365 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D KQP88_22045 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D KQP88_08185 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D KQP88_09130 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D KQP88_20635 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D KQP88_17790 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D KQP88_15090 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D KQP88_17785 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D KQP88_08140 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D KQP88_08150 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D KQP88_08145 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D KQP88_24010 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_14750 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_17595 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D KQP88_18210 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KQP88_22865 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D KQP88_07645 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D KQP88_16325 pyridoxal-phosphate dependent enzyme K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D KQP88_06640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KQP88_14665 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KQP88_05780 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D KQP88_23145 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D KQP88_16390 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D KQP88_05260 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_21015 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_23800 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D KQP88_23080 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_01860 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D KQP88_01700 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D KQP88_06820 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D KQP88_18030 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D KQP88_23610 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_07135 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_17775 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:plij00280] D KQP88_05260 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_21015 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_04580 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D KQP88_04585 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D KQP88_04590 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D KQP88_04595 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_11850 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D KQP88_11830 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_15135 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D KQP88_18900 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D KQP88_03340 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D KQP88_06805 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D KQP88_03290 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_08385 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_03285 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_11815 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D KQP88_11825 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D KQP88_11820 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D KQP88_11835 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D KQP88_21695 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D KQP88_08560 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D KQP88_08555 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:plij00290] D KQP88_23580 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D KQP88_16345 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D KQP88_14685 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D KQP88_14680 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D KQP88_14670 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D KQP88_04025 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_18175 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_04030 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D KQP88_04035 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D KQP88_01815 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D KQP88_05260 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_21015 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_04580 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D KQP88_17620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D KQP88_05575 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:plij00300] D KQP88_05780 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D KQP88_06640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KQP88_14665 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KQP88_16175 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D KQP88_17290 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D KQP88_03760 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D KQP88_06020 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D KQP88_11575 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D KQP88_06060 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D KQP88_05995 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D KQP88_00955 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D KQP88_00960 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D KQP88_08070 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D KQP88_20020 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D KQP88_20015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:plij00310] D KQP88_06875 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D KQP88_06865 aspartate aminotransferase family protein K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39] D KQP88_14535 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_24420 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_02900 FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2] D KQP88_02895 carbon-nitrogen hydrolase family protein K01506 davA; 5-aminopentanamidase [EC:3.5.1.30] D KQP88_01445 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_23810 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_01440 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10525 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_06860 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D KQP88_12060 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D KQP88_24415 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D KQP88_13910 Ldh family oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D KQP88_06880 FAD-binding oxidoreductase K26065 amaA; L-pipecolate oxidase D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:plij00220] D KQP88_18810 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D KQP88_18765 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D KQP88_01005 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D KQP88_19255 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D KQP88_19260 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D KQP88_22535 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D KQP88_22530 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D KQP88_22515 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D KQP88_11020 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D KQP88_23680 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_23690 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01775 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_11155 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_16100 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_03770 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D KQP88_03765 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D KQP88_07265 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_17620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D KQP88_01315 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D KQP88_19870 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D KQP88_00720 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D KQP88_22015 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D KQP88_11575 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D KQP88_23815 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D KQP88_01310 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:plij00330] D KQP88_18335 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D KQP88_22320 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D KQP88_24240 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D KQP88_24245 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D KQP88_03415 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D KQP88_08185 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D KQP88_22045 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D KQP88_23675 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_00775 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D KQP88_17070 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_22895 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_18200 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D KQP88_09600 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KQP88_06595 aruF; arginine/ornithine succinyltransferase subunit alpha K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D KQP88_06600 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D KQP88_06610 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D KQP88_06590 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D KQP88_06605 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D KQP88_06620 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D KQP88_10580 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D KQP88_00800 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D KQP88_23135 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D KQP88_02095 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D KQP88_20745 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D KQP88_21300 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D KQP88_23405 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:plij00340] D KQP88_20170 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D KQP88_02765 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D KQP88_23355 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D KQP88_23350 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D KQP88_23990 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D KQP88_24000 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D KQP88_23985 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D KQP88_24005 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D KQP88_19705 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20160 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20165 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D KQP88_23510 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D KQP88_23515 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D KQP88_02005 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D KQP88_23490 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D KQP88_23525 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D KQP88_23440 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D KQP88_23530 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_17070 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_22895 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:plij00350] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_19705 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20160 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_24010 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_14750 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_15295 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D KQP88_15285 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D KQP88_15300 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D KQP88_15280 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D KQP88_17070 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_22895 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D KQP88_19345 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_21005 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_23810 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_01440 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10525 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:plij00360] D KQP88_06545 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D KQP88_17070 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_22895 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_19705 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20160 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_24010 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_14750 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_15295 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D KQP88_00815 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D KQP88_13715 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D KQP88_09600 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KQP88_10305 Rieske 2Fe-2S domain-containing protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D KQP88_10300 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:plij00380] D KQP88_14535 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_24420 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_17070 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_22895 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_11770 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D KQP88_09600 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KQP88_00225 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D KQP88_15445 katB; catalase KatB K03781 katE; catalase [EC:1.11.1.6] D KQP88_21725 catalase K03781 katE; catalase [EC:1.11.1.6] D KQP88_13715 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:plij00400] D KQP88_13465 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KQP88_14275 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KQP88_17645 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KQP88_01905 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D KQP88_12980 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D KQP88_22350 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D KQP88_13975 bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D KQP88_13965 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D KQP88_00115 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D KQP88_13720 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D KQP88_01900 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D KQP88_00655 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D KQP88_17765 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D KQP88_08130 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D KQP88_03125 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KQP88_22075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D KQP88_22070 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D KQP88_16420 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D KQP88_22065 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D KQP88_00395 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D KQP88_00390 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D KQP88_01765 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D KQP88_17770 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D KQP88_05270 transporter substrate-binding domain-containing protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_19705 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20160 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_24010 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_14750 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_06545 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:plij00410] D KQP88_03905 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_03910 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D KQP88_03285 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_03290 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D KQP88_08385 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:plij00430] D KQP88_03365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_08995 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_07265 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D KQP88_04490 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:plij00450] D KQP88_11660 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D KQP88_21530 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D KQP88_10780 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D KQP88_18925 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D KQP88_20135 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D KQP88_20145 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D KQP88_13145 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_18715 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:plij00460] D KQP88_09275 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_12925 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_19370 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_11770 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D KQP88_03365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_08995 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_24620 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D KQP88_02240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_20830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:plij00470] D KQP88_00825 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D KQP88_18940 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_19985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_11020 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D KQP88_04275 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D KQP88_20005 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D KQP88_09670 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] D KQP88_12000 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D KQP88_01700 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D KQP88_00955 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D KQP88_00960 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D KQP88_09235 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D KQP88_00815 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:plij00480] D KQP88_03365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_08995 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_01170 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D KQP88_13680 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D KQP88_18890 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D KQP88_13670 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D KQP88_23800 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D KQP88_23080 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D KQP88_04985 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D KQP88_16280 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D KQP88_01000 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_06730 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_08075 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_11985 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_16595 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_19865 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_11010 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D KQP88_08840 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KQP88_08845 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KQP88_10960 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D KQP88_05125 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KQP88_10965 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KQP88_04505 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D KQP88_17610 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D KQP88_17895 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D KQP88_03415 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D KQP88_08185 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:plij00540] D KQP88_06135 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D KQP88_19965 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D KQP88_06125 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D KQP88_07375 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D KQP88_06140 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D KQP88_16565 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D KQP88_20210 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D KQP88_06170 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D KQP88_16555 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D KQP88_02600 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D KQP88_00065 lysophospholipid acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D KQP88_16910 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D KQP88_17140 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D KQP88_17245 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D KQP88_04280 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D KQP88_20065 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D KQP88_02575 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D KQP88_00045 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D KQP88_02505 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D KQP88_02500 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D KQP88_02515 rfaP; lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D KQP88_02510 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:plij00541] D KQP88_11005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KQP88_07280 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KQP88_21665 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KQP88_07290 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D KQP88_25030 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_11000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D KQP88_24260 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_04185 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_24255 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_04195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_24265 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D KQP88_04190 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D KQP88_21670 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D KQP88_01165 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D KQP88_04800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_15200 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_00695 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D KQP88_00690 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D KQP88_09150 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D KQP88_09160 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D KQP88_25075 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D KQP88_19085 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D KQP88_19080 NAD-dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D KQP88_19075 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D KQP88_17730 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D KQP88_19060 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D KQP88_19065 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] C 00550 Peptidoglycan biosynthesis [PATH:plij00550] D KQP88_20175 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D KQP88_16550 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D KQP88_19990 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D KQP88_20005 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D KQP88_20020 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D KQP88_18940 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_19985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_20015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D KQP88_06095 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D KQP88_10860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D KQP88_20010 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D KQP88_19995 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D KQP88_23195 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D KQP88_01870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KQP88_04005 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D KQP88_11255 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KQP88_21280 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KQP88_20025 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D KQP88_21260 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D KQP88_14080 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:plij00552] D KQP88_10860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D KQP88_17730 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D KQP88_19060 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:plij00543] D KQP88_08590 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D KQP88_04850 alg8; mannuronan synthase K19290 alg8; mannuronan synthase [EC:2.4.1.33] D KQP88_04845 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33] D KQP88_04815 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D KQP88_04810 alginate O-acetyltransferase K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D KQP88_04805 alginate O-acetyltransferase AlgF K19296 algF; alginate O-acetyltransferase complex protein AlgF D KQP88_04825 alginate O-acetyltransferase K19293 algX; alginate biosynthesis protein AlgX D KQP88_15195 undecaprenyl-phosphate glucose phosphotransferase K20997 pslA; polysaccharide biosynthesis protein PslA D KQP88_15215 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D KQP88_15225 glycosyltransferase family 4 protein K21001 pslH; polysaccharide biosynthesis protein PslH D KQP88_15230 glycosyltransferase family 4 protein K21002 pslI; polysaccharide biosynthesis protein PslI D KQP88_01705 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_05465 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KQP88_06795 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:plij00730] D KQP88_02610 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D KQP88_21150 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D KQP88_05475 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_08660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_01780 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D KQP88_20665 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D KQP88_21545 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D KQP88_23180 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D KQP88_21155 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D KQP88_21565 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D KQP88_02700 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D KQP88_05925 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:plij00740] D KQP88_21555 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D KQP88_10480 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D KQP88_21580 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D KQP88_21590 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D KQP88_00940 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D KQP88_06625 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D KQP88_21575 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D KQP88_21585 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D KQP88_20725 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D KQP88_08580 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D KQP88_17940 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D KQP88_02620 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D KQP88_21350 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:plij00750] D KQP88_18570 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D KQP88_24715 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D KQP88_07095 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D KQP88_21625 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D KQP88_02380 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D KQP88_08000 pdxB; 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D KQP88_17775 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D KQP88_03050 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D KQP88_19105 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D KQP88_05785 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:plij00760] D KQP88_19160 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D KQP88_17320 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D KQP88_20420 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D KQP88_02855 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D KQP88_14265 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D KQP88_06215 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D KQP88_21295 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D KQP88_18015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D KQP88_10720 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D KQP88_02850 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D KQP88_06250 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D KQP88_09415 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D KQP88_17970 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D KQP88_16305 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D KQP88_15045 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D KQP88_24430 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D KQP88_24435 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D KQP88_24440 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D KQP88_23810 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_01440 gabD; NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10525 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D KQP88_10225 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:plij00770] D KQP88_04025 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_18175 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D KQP88_04030 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D KQP88_04035 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D KQP88_01815 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D KQP88_03915 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D KQP88_14270 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D KQP88_19845 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D KQP88_03910 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D KQP88_21955 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D KQP88_00735 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D KQP88_18015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D KQP88_01845 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D KQP88_20530 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D KQP88_19655 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D KQP88_05260 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_21015 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_03905 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:plij00780] D KQP88_22725 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D KQP88_01965 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D KQP88_14485 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D KQP88_01950 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_10215 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_16490 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_01955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_08315 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_16500 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_19800 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_22200 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_06130 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D KQP88_07505 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D KQP88_22730 alpha/beta fold hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D KQP88_22735 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D KQP88_22900 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D KQP88_22720 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D KQP88_22740 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D KQP88_21960 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D KQP88_17510 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:plij00785] D KQP88_21250 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D KQP88_21245 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_02490 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D KQP88_02485 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D KQP88_14540 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D KQP88_14535 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D KQP88_04585 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D KQP88_04590 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D KQP88_04595 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D KQP88_05015 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D KQP88_01270 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_05010 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_01275 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D KQP88_05020 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:plij00790] D KQP88_08090 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D KQP88_09645 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D KQP88_20375 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D KQP88_03000 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D KQP88_03005 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D KQP88_03920 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D KQP88_03800 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D KQP88_01805 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D KQP88_16410 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D KQP88_21555 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D KQP88_10480 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D KQP88_21580 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D KQP88_14240 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D KQP88_16485 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D KQP88_04550 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D KQP88_08705 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D KQP88_06540 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D KQP88_06545 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D KQP88_06460 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D KQP88_06465 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D KQP88_15015 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D KQP88_11355 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D KQP88_04875 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D KQP88_04885 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D KQP88_13945 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D KQP88_13940 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D KQP88_10195 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D KQP88_13950 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:plij00670] D KQP88_01805 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D KQP88_04550 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D KQP88_07435 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D KQP88_11140 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D KQP88_02240 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_20830 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KQP88_17995 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D KQP88_22385 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D KQP88_00080 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D KQP88_01270 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_05010 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D KQP88_10780 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D KQP88_23550 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D KQP88_02265 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KQP88_11145 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KQP88_19495 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KQP88_22870 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D KQP88_01220 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:plij00860] D KQP88_14740 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KQP88_04255 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D KQP88_21170 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D KQP88_01110 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D KQP88_01020 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D KQP88_01025 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D KQP88_01925 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D KQP88_00110 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D KQP88_07860 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D KQP88_22020 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D KQP88_04350 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D KQP88_01030 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D KQP88_08905 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D KQP88_00255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_05255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_00260 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D KQP88_22430 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D KQP88_22440 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D KQP88_22425 cobJ; precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D KQP88_10800 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D KQP88_10805 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D KQP88_10665 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D KQP88_22455 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D KQP88_22450 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D KQP88_22445 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D KQP88_22435 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D KQP88_17945 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D KQP88_10825 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D KQP88_19855 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D KQP88_17950 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D KQP88_17925 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D KQP88_17935 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D KQP88_17930 cobD; threonine-phosphate decarboxylase CobD K02225 cobC1; cobalamin biosynthesis protein CobC D KQP88_17920 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D KQP88_17905 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D KQP88_17915 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D KQP88_17910 alpha-ribazole phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D KQP88_10830 AAA family ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D KQP88_05040 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D KQP88_19795 DUF2470 domain-containing protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D KQP88_18790 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D KQP88_21720 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D KQP88_22625 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:plij00130] D KQP88_06425 ybgC; tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D KQP88_24500 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D KQP88_24505 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D KQP88_01160 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D KQP88_21350 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D KQP88_01255 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D KQP88_17795 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D KQP88_01250 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D KQP88_23335 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D KQP88_22040 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D KQP88_10365 isochorismate synthase K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2] D KQP88_14455 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D KQP88_17855 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D KQP88_18065 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D KQP88_11245 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D KQP88_15295 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:plij00900] D KQP88_21545 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D KQP88_06105 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D KQP88_06185 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D KQP88_04240 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D KQP88_06205 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D KQP88_05530 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D KQP88_20705 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_21350 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D KQP88_21540 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D KQP88_20765 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D KQP88_06095 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:plij00907] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_11835 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D KQP88_21695 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D KQP88_15135 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D KQP88_02375 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KQP88_10255 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KQP88_10260 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:plij00523] D KQP88_24260 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_04185 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_24255 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_04195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_24265 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D KQP88_04190 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D KQP88_21670 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:plij01054] D KQP88_12765 amino acid adenylation domain-containing protein K16126 syrB1; L-threonine---[L-threonyl-carrier protein] ligase [EC:6.2.1.70] D KQP88_09670 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:plij01053] D KQP88_10365 isochorismate synthase K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2] D KQP88_18120 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D KQP88_10370 isochorismate lyase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] D KQP88_10375 AMP-binding protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D KQP88_10400 amino acid adenylation domain-containing protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D KQP88_10385 Gfo/Idh/MocA family oxidoreductase K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D KQP88_10390 alpha/beta fold hydrolase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase C 01055 Biosynthesis of vancomycin group antibiotics D KQP88_24255 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_04195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:plij00946] D KQP88_09275 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_12925 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_19370 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D KQP88_23645 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:plij00332] D KQP88_20745 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D KQP88_21300 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:plij00261] D KQP88_12500 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein D KQP88_14910 MbtH family protein K05375 mbtH; MbtH protein D KQP88_20135 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D KQP88_20145 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D KQP88_06640 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KQP88_14665 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KQP88_16175 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D KQP88_17290 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D KQP88_03760 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D KQP88_22525 GNAT family N-acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:plij00521] D KQP88_05070 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KQP88_13520 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D KQP88_00725 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KQP88_05455 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D KQP88_08400 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D KQP88_12945 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D KQP88_24260 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_04185 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_24255 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_04195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_24265 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D KQP88_04190 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D KQP88_21670 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D KQP88_05070 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:plij00525] D KQP88_24260 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_04185 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D KQP88_24255 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D KQP88_04195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:plij00401] D KQP88_17765 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_19705 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20160 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_24010 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_14750 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D KQP88_03125 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KQP88_22075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D KQP88_16505 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D KQP88_01955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_08315 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_16500 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_19800 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_22200 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_07505 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics [PATH:plij00998] D KQP88_02030 acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_02035 acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_16135 acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_16495 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D KQP88_13125 sbnB; 2,3-diaminopropionate biosynthesis protein SbnB K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] C 00999 Biosynthesis of various plant secondary metabolites [PATH:plij00999] D KQP88_02365 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D KQP88_00115 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D KQP88_09275 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_12925 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D KQP88_19370 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D KQP88_13125 sbnB; 2,3-diaminopropionate biosynthesis protein SbnB K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:plij00362] D KQP88_10875 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D KQP88_18435 alpha/beta hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D KQP88_15135 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D KQP88_19455 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D KQP88_14010 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D KQP88_14015 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D KQP88_14000 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D KQP88_05405 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D KQP88_13995 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D KQP88_16165 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D KQP88_06425 ybgC; tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D KQP88_24420 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:plij00627] D KQP88_09600 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KQP88_11770 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D KQP88_21350 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:plij00364] D KQP88_12065 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:plij00625] D KQP88_19345 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_21005 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D KQP88_23865 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_06810 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D KQP88_02270 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D KQP88_23860 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:plij00361] D KQP88_12065 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D KQP88_23860 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:plij00623] D KQP88_12065 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:plij00633] D KQP88_10110 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D KQP88_15430 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D KQP88_15135 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:plij00643] D KQP88_15285 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D KQP88_15300 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D KQP88_15280 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D KQP88_09600 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KQP88_11770 carbon-nitrogen hydrolase family protein K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D KQP88_19465 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D KQP88_19460 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:plij00791] D KQP88_19260 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D KQP88_19255 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D KQP88_22535 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D KQP88_22530 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D KQP88_22515 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:plij00930] D KQP88_15270 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D KQP88_07115 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_12465 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_11785 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D KQP88_15140 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:plij00626] D KQP88_19345 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_21005 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D KQP88_06195 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D KQP88_14010 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D KQP88_14015 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:plij03020] D KQP88_21895 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D KQP88_21890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D KQP88_21735 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D KQP88_00530 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D KQP88_13525 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:plij03010] D KQP88_17755 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D KQP88_06075 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D KQP88_21830 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D KQP88_21740 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D KQP88_21775 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D KQP88_02800 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D KQP88_21880 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D KQP88_21790 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D KQP88_20100 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D KQP88_21865 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D KQP88_21745 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D KQP88_21885 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D KQP88_21750 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D KQP88_21795 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D KQP88_03855 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D KQP88_05750 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D KQP88_21815 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D KQP88_02805 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D KQP88_21840 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D KQP88_20735 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D KQP88_02985 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D KQP88_21910 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D KQP88_21845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D KQP88_21860 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D KQP88_21855 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D KQP88_21800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D KQP88_21785 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D KQP88_21900 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D KQP88_02815 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D KQP88_21905 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D KQP88_21915 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D KQP88_20105 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D KQP88_21810 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D KQP88_21765 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D KQP88_21825 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D KQP88_21730 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D KQP88_21780 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D KQP88_05765 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D KQP88_13805 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D KQP88_20760 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D KQP88_21835 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D KQP88_21850 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D KQP88_21805 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D KQP88_04225 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D KQP88_20755 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D KQP88_00755 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D KQP88_21820 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D KQP88_21770 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D KQP88_23245 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D KQP88_18945 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D KQP88_16515 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D KQP88_00760 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D KQP88_25165 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D KQP88_13810 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D KQP88_21755 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D KQP88_24410 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_03295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_04055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_06755 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_08680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_21985 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_04070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_06770 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_03310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_08695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_21970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_24395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_03315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24385 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_04075 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_06775 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_08700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_21965 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:plij00970] D KQP88_14725 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_06765 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_03305 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_04065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_08690 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_14735 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_21975 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_24400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_06655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_06695 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_01430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_06660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_07440 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_09880 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D KQP88_20625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D KQP88_16365 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KQP88_16370 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KQP88_17095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KQP88_13230 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D KQP88_04235 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D KQP88_17575 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_14730 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_17585 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_14720 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_19290 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_21940 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_13435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_17570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_17580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_07445 tRNA-His K14226 tRNA-His; tRNA His D KQP88_03300 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_04060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_06760 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_08685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_21980 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_24405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_03820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_05420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_02780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_13200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_07450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_02785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_20615 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D KQP88_06470 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D KQP88_04170 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_02965 tRNA-Ile K14230 tRNA-Met; tRNA Met D KQP88_03825 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_06350 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_06345 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_24055 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D KQP88_20610 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KQP88_13780 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KQP88_20620 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KQP88_08310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_06650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_17270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_08945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_24175 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KQP88_21935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KQP88_21930 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D KQP88_21945 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D KQP88_16375 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_17100 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_10585 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_10595 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_14740 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KQP88_20345 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D KQP88_20350 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D KQP88_20340 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D KQP88_07385 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D KQP88_06635 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D KQP88_06400 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KQP88_00055 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D KQP88_00050 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D KQP88_13820 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D KQP88_08900 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D KQP88_07390 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D KQP88_13145 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_18715 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_00080 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D KQP88_04970 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D KQP88_21220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KQP88_20720 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D KQP88_05880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D KQP88_23255 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KQP88_06365 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D KQP88_05535 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D KQP88_13800 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D KQP88_13795 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D KQP88_21995 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KQP88_20120 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:plij03060] D KQP88_21760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D KQP88_21925 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D KQP88_03815 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D KQP88_05440 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D KQP88_05445 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D KQP88_05435 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D KQP88_25150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D KQP88_19875 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KQP88_23940 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D KQP88_05745 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D KQP88_07770 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D KQP88_23215 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D KQP88_23360 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D KQP88_23365 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D KQP88_23370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D KQP88_19130 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D KQP88_20715 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:plij04122] D KQP88_05475 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_08660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_01860 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D KQP88_07995 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D KQP88_17310 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D KQP88_08925 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D KQP88_08930 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D KQP88_08935 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D KQP88_08920 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D KQP88_08830 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D KQP88_04885 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D KQP88_11355 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D KQP88_04880 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D KQP88_04270 molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D KQP88_04875 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D KQP88_13945 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D KQP88_01780 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D KQP88_23185 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:plij03018] D KQP88_23565 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D KQP88_16545 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D KQP88_04890 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D KQP88_06175 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KQP88_03860 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D KQP88_20975 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D KQP88_22875 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D KQP88_02790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D KQP88_17635 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D KQP88_16620 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D KQP88_01155 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D KQP88_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D KQP88_19780 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KQP88_02745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D KQP88_01115 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D KQP88_03925 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:plij03030] D KQP88_07555 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_20980 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_22830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_06150 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KQP88_07830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KQP88_16470 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KQP88_21230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KQP88_04980 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D KQP88_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KQP88_02820 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D KQP88_02980 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D KQP88_21705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D KQP88_07550 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D KQP88_06145 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D KQP88_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D KQP88_02350 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_07755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:plij03410] D KQP88_18745 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D KQP88_19215 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D KQP88_24045 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D KQP88_21305 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D KQP88_01830 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D KQP88_21165 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D KQP88_00060 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D KQP88_00700 crc; catabolite repression control protein Crc K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D KQP88_11860 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D KQP88_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D KQP88_05820 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KQP88_02350 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_07755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:plij03420] D KQP88_15075 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D KQP88_21715 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D KQP88_14745 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D KQP88_13445 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D KQP88_24690 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KQP88_05615 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KQP88_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D KQP88_02350 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_07755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_13525 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:plij03430] D KQP88_06240 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D KQP88_02735 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D KQP88_24690 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KQP88_05615 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KQP88_19505 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D KQP88_05585 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D KQP88_21535 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D KQP88_05820 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KQP88_21705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D KQP88_06150 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KQP88_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KQP88_07830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KQP88_21230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KQP88_16470 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KQP88_07555 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_20980 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_22830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_04980 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D KQP88_02350 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_07755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:plij03440] D KQP88_05820 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KQP88_21705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D KQP88_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D KQP88_19110 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D KQP88_07840 recR; recombination mediator RecR K06187 recR; recombination protein RecR D KQP88_06255 recA; recombinase RecA K03553 recA; recombination protein RecA D KQP88_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D KQP88_06415 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D KQP88_06420 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D KQP88_06410 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D KQP88_00485 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D KQP88_03325 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D KQP88_03320 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D KQP88_03330 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D KQP88_06150 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KQP88_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KQP88_07830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KQP88_21230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KQP88_16470 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KQP88_07555 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_20980 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_22830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_04980 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D KQP88_23250 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:plij03450] D KQP88_08500 Ku protein K10979 ku; DNA end-binding protein Ku D KQP88_08505 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:plij03250] D KQP88_18440 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:plij02010] D KQP88_15695 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D KQP88_01475 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D KQP88_01480 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D KQP88_01485 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D KQP88_01490 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D KQP88_09580 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D KQP88_09585 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D KQP88_09590 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D KQP88_23755 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D KQP88_23765 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein D KQP88_23760 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D KQP88_23715 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_23750 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_01545 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_01730 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_09255 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_11050 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_12635 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_13320 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_17515 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_23710 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D KQP88_01540 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D KQP88_09260 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D KQP88_12640 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D KQP88_23705 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_01535 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_09265 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_12645 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_13180 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D KQP88_13185 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D KQP88_13190 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D KQP88_01260 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D KQP88_09120 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D KQP88_01265 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D KQP88_18815 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D KQP88_23665 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_23670 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_06675 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_12015 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_23650 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D KQP88_23655 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D KQP88_23660 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D KQP88_23495 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_00445 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_02190 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_12260 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_15470 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_16870 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_23500 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D KQP88_02185 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D KQP88_23505 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D KQP88_02180 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D KQP88_03395 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D KQP88_03390 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D KQP88_03400 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D KQP88_03405 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D KQP88_10640 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D KQP88_05105 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D KQP88_10655 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D KQP88_10650 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D KQP88_10645 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D KQP88_20190 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D KQP88_20195 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D KQP88_20200 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D KQP88_20185 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D KQP88_20205 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D KQP88_03195 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D KQP88_03255 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D KQP88_03250 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D KQP88_03260 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D KQP88_05090 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D KQP88_05095 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D KQP88_05100 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D KQP88_13875 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D KQP88_13865 ABC transporter permease K10440 rbsC; ribose transport system permease protein D KQP88_13870 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D KQP88_13850 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D KQP88_11695 substrate-binding domain-containing protein K10537 araF; L-arabinose transport system substrate-binding protein D KQP88_11705 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D KQP88_11700 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D KQP88_06975 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D KQP88_06985 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D KQP88_06980 xylG; D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D KQP88_08410 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D KQP88_12955 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D KQP88_08420 ABC transporter permease K17214 K17214; inositol transport system permease protein D KQP88_08415 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D KQP88_07430 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D KQP88_07415 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D KQP88_07420 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D KQP88_07405 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D KQP88_07410 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D KQP88_09930 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D KQP88_09935 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D KQP88_09940 ABC transporter permease subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D KQP88_09945 ATP-binding cassette domain-containing protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D KQP88_24560 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D KQP88_09525 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D KQP88_11855 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein D KQP88_24555 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D KQP88_09530 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D KQP88_24550 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D KQP88_09535 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D KQP88_24545 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D KQP88_09540 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D KQP88_18680 ABC transporter permease K10015 hisM; histidine transport system permease protein D KQP88_18675 ABC transporter permease K10016 hisQ; histidine transport system permease protein D KQP88_18690 ATP-binding cassette domain-containing protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_18670 transporter substrate-binding domain-containing protein K10014 hisJ; histidine transport system substrate-binding protein D KQP88_18845 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D KQP88_18855 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D KQP88_18850 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D KQP88_18860 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D KQP88_04900 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D KQP88_04905 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D KQP88_04910 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D KQP88_04915 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_01695 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KQP88_01690 tcyL; cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D KQP88_01685 yecC; L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_06560 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D KQP88_06570 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D KQP88_06565 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D KQP88_06580 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_24115 ABC transporter substrate-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D KQP88_24120 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D KQP88_24125 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D KQP88_24110 ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_02860 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D KQP88_18520 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D KQP88_02865 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D KQP88_18525 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D KQP88_02870 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D KQP88_18530 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D KQP88_02875 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D KQP88_18535 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D KQP88_02880 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D KQP88_18540 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D KQP88_00240 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D KQP88_01525 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D KQP88_01660 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D KQP88_00235 ABC transporter permease K02072 metI; D-methionine transport system permease protein D KQP88_01650 ABC transporter permease K02072 metI; D-methionine transport system permease protein D KQP88_00230 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D KQP88_01655 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D KQP88_22480 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D KQP88_22490 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D KQP88_22495 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D KQP88_22500 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D KQP88_22505 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D KQP88_00750 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03460 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03470 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03475 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03480 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03455 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D KQP88_03450 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D KQP88_03445 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D KQP88_03440 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D KQP88_01360 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_07525 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_07530 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_13475 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_01355 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D KQP88_07520 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D KQP88_13480 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D KQP88_01350 ABC transporter permease K13895 yejE; microcin C transport system permease protein D KQP88_07515 ABC transporter permease K13895 yejE; microcin C transport system permease protein D KQP88_13485 ABC transporter permease K13895 yejE; microcin C transport system permease protein D KQP88_01345 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D KQP88_07510 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D KQP88_13490 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D KQP88_03215 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB K23181 fecB; ferric citrate transport system substrate-binding protein D KQP88_03205 iron chelate uptake ABC transporter family permease subunit K23182 fecD; ferric citrate transport system permease protein D KQP88_03210 fecC; iron-dicitrate ABC transporter permease FecC K23183 fecC; ferric citrate transport system permease protein D KQP88_03200 fecE; Fe(3+) dicitrate ABC transporter ATP-binding protein FecE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D KQP88_12555 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D KQP88_00200 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D KQP88_14885 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D KQP88_00215 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D KQP88_14895 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D KQP88_00210 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D KQP88_14890 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D KQP88_00600 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D KQP88_00595 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D KQP88_15020 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D KQP88_15030 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D KQP88_15025 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D KQP88_15735 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D KQP88_15740 heme ABC transporter permease K02195 ccmC; heme exporter protein C D KQP88_15745 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D KQP88_15750 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D KQP88_04990 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D KQP88_04995 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D KQP88_20225 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D KQP88_23205 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D KQP88_23210 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D KQP88_10410 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D KQP88_10405 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D KQP88_02560 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D KQP88_20575 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D KQP88_18445 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D KQP88_16645 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D KQP88_12160 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D KQP88_12590 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D KQP88_14770 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D KQP88_12510 cyclic peptide export ABC transporter K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D KQP88_14800 cyclic peptide export ABC transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D KQP88_12755 cyclic peptide export ABC transporter K06161 syrD; putative syringomycin transport system ATP-binding/permease protein D KQP88_03510 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D KQP88_09815 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:plij02060] D KQP88_20390 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D KQP88_20380 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D KQP88_20385 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D KQP88_23560 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D KQP88_20250 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D KQP88_20240 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:plij03070] D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_20570 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D KQP88_20575 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D KQP88_09070 sctC; type III secretion system outer membrane ring subunit SctC K03219 yscC; type III secretion protein C D KQP88_09220 sctW; type III secretion system gatekeeper subunit SctW K04058 yscW; type III secretion protein W D KQP88_09045 sctJ; type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J D KQP88_09185 sctR; type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R D KQP88_09180 sctS; type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S D KQP88_09175 sctT; type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T D KQP88_09170 sctU; type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U D KQP88_09215 sctV; type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V D KQP88_09205 FliI/YscN family ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D KQP88_09190 sctQ; type III secretion system cytoplasmic ring protein SctQ K03225 yscQ; type III secretion protein Q D KQP88_09055 sctL; type III secretion system stator protein SctL K03223 yscL; type III secretion protein L D KQP88_09335 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D KQP88_19930 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D KQP88_19935 pilus assembly protein PilZ K02452 gspC; general secretion pathway protein C D KQP88_09290 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D KQP88_19920 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D KQP88_09295 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D KQP88_19915 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D KQP88_09300 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D KQP88_19910 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D KQP88_09305 type II secretion system GspH family protein K02458 gspI; general secretion pathway protein I D KQP88_19905 type II secretion system protein K02458 gspI; general secretion pathway protein I D KQP88_09310 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D KQP88_19900 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D KQP88_09315 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D KQP88_19950 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D KQP88_09320 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L D KQP88_19895 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D KQP88_09325 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D KQP88_01285 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D KQP88_09285 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D KQP88_19925 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D KQP88_05440 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D KQP88_05445 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D KQP88_21925 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D KQP88_03815 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D KQP88_21760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D KQP88_05435 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D KQP88_25150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D KQP88_19875 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KQP88_23215 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D KQP88_23940 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D KQP88_05745 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D KQP88_23360 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D KQP88_23365 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D KQP88_23370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D KQP88_01610 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_04755 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_05375 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_11495 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_12360 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_14835 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_22315 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_01615 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_04760 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_11500 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_11550 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D KQP88_12390 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D KQP88_11565 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D KQP88_12375 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D KQP88_11560 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK D KQP88_12380 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK D KQP88_11535 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D KQP88_12410 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D KQP88_12370 serine/threonine-protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] B B 09132 Signal transduction C 02020 Two-component system [PATH:plij02020] D KQP88_24515 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D KQP88_24510 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D KQP88_20375 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D KQP88_24560 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D KQP88_09525 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D KQP88_11855 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein D KQP88_18100 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D KQP88_18105 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D KQP88_23780 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D KQP88_23785 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D KQP88_17370 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR D KQP88_18130 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D KQP88_18135 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D KQP88_19140 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D KQP88_13270 baeS; sensor histidine kinase efflux regulator BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D KQP88_13275 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D KQP88_11880 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D KQP88_11885 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump D KQP88_11890 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump D KQP88_05155 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_11420 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_15635 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_05160 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_11425 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_15630 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_06890 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_13405 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_06895 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D KQP88_13410 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D KQP88_24985 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D KQP88_24990 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D KQP88_25040 FliC/FljB family flagellin K02406 fliC; flagellin D KQP88_15960 flagellin FliC K02406 fliC; flagellin D KQP88_25025 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_15815 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_24995 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_25045 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D KQP88_02690 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_15790 flagellar motor protein K02556 motA; chemotaxis protein MotA D KQP88_14395 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D KQP88_14390 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D KQP88_14410 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D KQP88_14405 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D KQP88_14400 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D KQP88_14415 kdpF; K(+)-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit D KQP88_19185 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D KQP88_19190 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D KQP88_19205 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D KQP88_19200 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D KQP88_19195 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D KQP88_00260 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D KQP88_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D KQP88_06340 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D KQP88_06370 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D KQP88_17250 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D KQP88_01010 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D KQP88_01015 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D KQP88_04855 nucleotide sugar dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D KQP88_05800 response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D KQP88_18035 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D KQP88_13450 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D KQP88_06645 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_15350 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_16835 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_05790 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D KQP88_14070 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D KQP88_14065 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA D KQP88_18755 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA D KQP88_15590 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D KQP88_22235 PAS domain-containing protein K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3] D KQP88_22250 response regulator transcription factor K27077 pprB; two-component system, NarL family, response regulator PprB D KQP88_05190 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D KQP88_22295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D KQP88_22290 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D KQP88_22285 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D KQP88_22280 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D KQP88_22275 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D KQP88_22270 type II secretion system F family protein K12510 tadB; tight adherence protein B D KQP88_22265 type II secretion system F family protein K12511 tadC; tight adherence protein C D KQP88_22260 hypothetical protein K27079 tadD; tight adherence protein D D KQP88_22230 hypothetical protein K27080 tadG; tight adherence protein G D KQP88_06065 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D KQP88_01750 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D KQP88_01745 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D KQP88_23680 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_23690 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01775 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_11155 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_16100 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_08550 TIGR00366 family protein K02106 atoE; short-chain fatty acids transporter D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_24270 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D KQP88_19375 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D KQP88_24275 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D KQP88_19380 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D KQP88_04090 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_09740 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_18095 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_18155 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_20655 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D KQP88_20660 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D KQP88_20230 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D KQP88_20510 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D KQP88_00145 PAS domain-containing protein K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D KQP88_00140 algB; sigma-54-dependent response regulator transcription factor AlgB K11384 algB; two-component system, NtrC family, response regulator AlgB D KQP88_10685 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_16065 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_17490 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_23380 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_23385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_24825 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_25060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00685 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00885 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_01340 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_01385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_02205 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_04125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_06745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08360 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08730 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09980 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_10145 CHASE3 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_11110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_11415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_12020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_13740 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_15250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_15455 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17480 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_18910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_20545 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_14320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17460 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07975 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D KQP88_18255 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D KQP88_15770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_15775 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_17485 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_15800 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_17475 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_15810 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_17465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_10690 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_15795 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_17500 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_05225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_15170 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_16070 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_23060 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K02660 pilJ; twitching motility protein PilJ D KQP88_23065 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D KQP88_23055 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D KQP88_23075 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D KQP88_23070 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D KQP88_23050 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D KQP88_05850 chemotaxis protein CheR K13486 wspC; chemotaxis protein methyltransferase WspC D KQP88_05840 methyl-accepting chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA D KQP88_05845 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D KQP88_05855 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD D KQP88_05860 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D KQP88_05865 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D KQP88_05870 PleD family two-component system response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D KQP88_15935 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D KQP88_15930 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D KQP88_15925 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D KQP88_18865 sensor histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D KQP88_18870 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR D KQP88_18860 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D KQP88_18855 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D KQP88_18850 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D KQP88_18845 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D KQP88_01500 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_22055 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_11020 glsB; glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D KQP88_03500 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D KQP88_03505 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D KQP88_20095 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D KQP88_20090 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D KQP88_20085 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D KQP88_08305 c-type cytochrome K08738 CYC; cytochrome c D KQP88_07915 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D KQP88_07935 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D KQP88_07910 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D KQP88_07930 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D KQP88_07905 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D KQP88_07925 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D KQP88_07900 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D KQP88_07920 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D KQP88_20910 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D KQP88_20905 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_08585 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D KQP88_08635 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D KQP88_08630 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D KQP88_02320 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_04650 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_13610 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_11710 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_04625 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_24370 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_24375 FecR family protein K07165 fecR; transmembrane sensor D KQP88_02315 FecR family protein K07165 fecR; transmembrane sensor D KQP88_04645 FecR family protein K07165 fecR; transmembrane sensor D KQP88_05050 FecR domain-containing protein K07165 fecR; transmembrane sensor D KQP88_11715 FecR domain-containing protein K07165 fecR; transmembrane sensor D KQP88_13245 FecR family protein K07165 fecR; transmembrane sensor D KQP88_13615 FecR family protein K07165 fecR; transmembrane sensor D KQP88_13915 FecR family protein K07165 fecR; transmembrane sensor D KQP88_15530 FecR domain-containing protein K07165 fecR; transmembrane sensor D KQP88_04675 FecR family protein K07165 fecR; transmembrane sensor D KQP88_05655 FecR family protein K07165 fecR; transmembrane sensor D KQP88_04630 FecR family protein K07165 fecR; transmembrane sensor D KQP88_17605 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D KQP88_14475 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D KQP88_15880 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D KQP88_15885 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D KQP88_15890 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D KQP88_16080 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:plij04148] D KQP88_03415 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D KQP88_20095 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:plij02024] D KQP88_02745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D KQP88_03125 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KQP88_22075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D KQP88_13465 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KQP88_14275 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KQP88_17645 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KQP88_06890 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_13405 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_06895 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D KQP88_13410 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D KQP88_24985 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D KQP88_24990 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D KQP88_14390 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D KQP88_03100 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_10475 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_11365 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_16955 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_22780 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_03110 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_10465 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_11385 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_16970 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_22770 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_22775 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_03105 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_10470 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_11390 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_16965 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_03095 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_10460 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_11395 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_16975 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_22765 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_02860 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D KQP88_18520 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D KQP88_02865 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D KQP88_18525 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D KQP88_02870 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D KQP88_18530 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D KQP88_02875 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D KQP88_18535 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D KQP88_02880 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D KQP88_18540 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D KQP88_18470 fadD1; long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D KQP88_01500 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_22055 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_00205 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D KQP88_12180 helix-turn-helix transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D KQP88_12610 helix-turn-helix transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D KQP88_21555 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D KQP88_21590 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D KQP88_12175 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_13255 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_19445 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_23850 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_09635 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_09805 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_11335 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_12200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_12670 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_12895 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_23845 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_09630 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_09800 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_11315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_12205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_12665 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_12900 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_23840 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_09625 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_09795 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_11320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_12210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_12660 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_12905 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_23835 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_09620 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_09790 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_11325 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_12215 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_12655 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_12910 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_09615 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_09785 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_11330 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_12220 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_25150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D KQP88_21925 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D KQP88_03815 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D KQP88_21760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D KQP88_05435 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D KQP88_19875 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KQP88_23215 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D KQP88_23940 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D KQP88_05745 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa [PATH:plij02025] D KQP88_23060 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K02660 pilJ; twitching motility protein PilJ D KQP88_23065 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D KQP88_23055 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D KQP88_23050 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D KQP88_23070 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D KQP88_23075 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D KQP88_02630 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D KQP88_22760 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D KQP88_01500 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_22055 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_15935 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D KQP88_03125 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KQP88_22075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D KQP88_18035 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D KQP88_21145 hybrid sensor histidine kinase/response regulator K20971 ladS; two-component system, sensor histidine kinase LadS D KQP88_22395 response regulator K20972 retS; two-component system, sensor histidine kinase RetS D KQP88_13450 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D KQP88_06645 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_15350 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_16835 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_17605 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D KQP88_14475 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D KQP88_15880 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D KQP88_15885 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D KQP88_15890 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D KQP88_16080 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D KQP88_25025 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_15815 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_12370 serine/threonine-protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D KQP88_11565 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D KQP88_12375 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D KQP88_11555 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D KQP88_12385 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D KQP88_11510 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D KQP88_12455 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D KQP88_11515 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D KQP88_12450 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D KQP88_01615 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_04760 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_11500 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_11530 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D KQP88_12415 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D KQP88_11535 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D KQP88_12410 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D KQP88_05840 methyl-accepting chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA D KQP88_05860 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D KQP88_05845 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D KQP88_05855 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD D KQP88_05865 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D KQP88_05870 PleD family two-component system response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D KQP88_11900 EAL domain-containing protein K21023 mucR; diguanylate cyclase [EC:2.7.7.65] D KQP88_19710 EAL domain-containing protein K21024 bifA; c-di-GMP phosphodiesterase [EC:3.1.4.52] D KQP88_15195 undecaprenyl-phosphate glucose phosphotransferase K20997 pslA; polysaccharide biosynthesis protein PslA D KQP88_04800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_15200 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D KQP88_15205 polysaccharide export protein K20987 pslD; polysaccharide biosynthesis/export protein PslD D KQP88_15210 exopolysaccharide transport family protein K20998 pslE; polysaccharide biosynthesis protein PslE D KQP88_15215 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D KQP88_15220 cellulase family glycosylhydrolase K21000 pslG; polysaccharide biosynthesis protein PslG D KQP88_08605 hypothetical protein K21000 pslG; polysaccharide biosynthesis protein PslG D KQP88_15225 glycosyltransferase family 4 protein K21001 pslH; polysaccharide biosynthesis protein PslH D KQP88_15230 glycosyltransferase family 4 protein K21002 pslI; polysaccharide biosynthesis protein PslI D KQP88_15235 O-antigen ligase family protein K21003 pslJ; polysaccharide biosynthesis protein PslJ D KQP88_15245 murein biosynthesis integral membrane protein MurJ K21004 pslK; polysaccharide biosynthesis protein PslK D KQP88_04845 alginate biosynthesis protein Alg44 K19291 alg44; mannuronan synthase [EC:2.4.1.33] D KQP88_02675 molecular chaperone K23127 fimW; cyclic-di-GMP-binding protein C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:plij02030] D KQP88_23380 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_23385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_24825 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_25060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00685 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00885 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_01340 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_01385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_02205 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_04125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_06745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08360 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08730 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09980 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_10145 CHASE3 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_11110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_11415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_12020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_13740 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_15250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_15455 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17480 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_18910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_20545 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_14320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17460 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07975 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D KQP88_18255 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D KQP88_13875 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D KQP88_00750 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03460 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03470 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03475 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03480 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_15800 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_17475 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_15770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_15775 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_17485 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_15810 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_17465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_15805 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D KQP88_10690 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_15795 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_17500 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_05225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_15170 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_16070 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_17495 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D KQP88_10685 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_16065 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_17490 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_24955 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D KQP88_15910 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D KQP88_24925 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D KQP88_15865 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D KQP88_24920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_15860 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_24995 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_25045 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D KQP88_02690 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_15790 flagellar motor protein K02556 motA; chemotaxis protein MotA D KQP88_25000 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_25050 OmpA family protein K02557 motB; chemotaxis protein MotB D KQP88_02695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_15785 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:plij02040] D KQP88_24965 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D KQP88_15920 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D KQP88_24960 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D KQP88_15915 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D KQP88_24955 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D KQP88_15910 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D KQP88_24950 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D KQP88_15905 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D KQP88_24945 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KQP88_15900 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KQP88_24940 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D KQP88_15895 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ D KQP88_15875 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D KQP88_24930 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D KQP88_01205 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D KQP88_15870 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D KQP88_24925 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D KQP88_15865 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D KQP88_24920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_15860 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_24915 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D KQP88_15855 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D KQP88_24910 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D KQP88_15850 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D KQP88_24905 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D KQP88_15845 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D KQP88_24900 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D KQP88_15840 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D KQP88_04515 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D KQP88_25010 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D KQP88_15830 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D KQP88_25005 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D KQP88_15835 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D KQP88_24840 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D KQP88_16075 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D KQP88_24845 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D KQP88_16035 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D KQP88_24850 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D KQP88_16030 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D KQP88_24855 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D KQP88_16025 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D KQP88_24860 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D KQP88_16020 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D KQP88_24865 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D KQP88_16010 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D KQP88_24870 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D KQP88_16005 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D KQP88_24875 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D KQP88_16000 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D KQP88_24880 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D KQP88_15995 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D KQP88_24885 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D KQP88_15990 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D KQP88_24890 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D KQP88_15985 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D KQP88_24895 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D KQP88_15980 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D KQP88_18770 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D KQP88_25040 FliC/FljB family flagellin K02406 fliC; flagellin D KQP88_15960 flagellin FliC K02406 fliC; flagellin D KQP88_24970 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D KQP88_15950 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D KQP88_24975 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D KQP88_15945 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D KQP88_15940 flagellar protein FliT K02423 fliT; flagellar protein FliT D KQP88_24995 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_25045 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D KQP88_02690 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_15790 flagellar motor protein K02556 motA; chemotaxis protein MotA D KQP88_25000 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_25050 OmpA family protein K02557 motB; chemotaxis protein MotB D KQP88_02695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_15785 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D KQP88_16080 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D KQP88_24830 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D KQP88_16085 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D KQP88_01695 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KQP88_02975 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D KQP88_15935 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D KQP88_24985 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D KQP88_24990 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D KQP88_20230 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D KQP88_15925 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D KQP88_25025 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_15815 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D KQP88_06175 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:plij04980] D KQP88_19855 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D KQP88_10780 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:plij01501] D KQP88_06370 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D KQP88_19815 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D KQP88_15095 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D KQP88_15590 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D KQP88_10040 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_12480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_13265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19435 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19735 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10045 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_12475 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19440 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19740 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_10270 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_12175 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_13255 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_19445 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_01870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KQP88_11255 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KQP88_21280 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KQP88_20025 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:plij01502] D KQP88_18940 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_19985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_00825 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D KQP88_20015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D KQP88_20010 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D KQP88_19995 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:plij01503] D KQP88_18100 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D KQP88_18105 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D KQP88_17245 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D KQP88_17370 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR D KQP88_24750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_02730 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_19140 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D KQP88_00170 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D KQP88_18440 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D KQP88_10040 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_12480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_13265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19435 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19735 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10045 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_12475 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19440 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19740 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_10270 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_06135 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D KQP88_06340 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:plij01000] C 01001 Protein kinases [BR:plij01001] D KQP88_03140 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D KQP88_23480 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D KQP88_21415 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D KQP88_08630 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D KQP88_24515 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D KQP88_18100 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D KQP88_23780 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D KQP88_18130 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D KQP88_13270 baeS; sensor histidine kinase efflux regulator BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D KQP88_05155 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_11420 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_15635 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_06890 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_13405 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_14395 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D KQP88_19185 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D KQP88_12490 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D KQP88_18035 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D KQP88_05790 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D KQP88_14070 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D KQP88_22235 PAS domain-containing protein K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3] D KQP88_01010 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D KQP88_01750 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D KQP88_20655 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D KQP88_24270 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D KQP88_19375 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D KQP88_00145 PAS domain-containing protein K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D KQP88_15650 hybrid sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D KQP88_15800 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_17475 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_23055 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D KQP88_05860 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D KQP88_15930 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D KQP88_03500 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D KQP88_17605 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D KQP88_14475 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D KQP88_07485 PAS domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D KQP88_21145 hybrid sensor histidine kinase/response regulator K20971 ladS; two-component system, sensor histidine kinase LadS D KQP88_22395 response regulator K20972 retS; two-component system, sensor histidine kinase RetS C 01009 Protein phosphatases and associated proteins [BR:plij01009] D KQP88_22865 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D KQP88_14500 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D KQP88_02670 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:plij01002] D KQP88_20715 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D KQP88_20525 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D KQP88_22245 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D KQP88_05605 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D KQP88_13050 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D KQP88_16395 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D KQP88_01915 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D KQP88_25065 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D KQP88_15270 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D KQP88_14290 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D KQP88_07980 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D KQP88_16280 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D KQP88_00330 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D KQP88_23220 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D KQP88_23225 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D KQP88_09820 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D KQP88_04985 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D KQP88_02420 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D KQP88_09605 M20 family metallopeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D KQP88_05995 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D KQP88_06070 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D KQP88_13895 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D KQP88_01245 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D KQP88_08665 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D KQP88_03795 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D KQP88_17625 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D KQP88_17315 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D KQP88_06110 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D KQP88_23035 biotin/lipoyl-binding protein K16922 yydH; putative peptide zinc metalloprotease protein D KQP88_21385 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D KQP88_19140 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D KQP88_20155 trypsin-like peptidase domain-containing protein K04691 hhoB; serine protease DegS [EC:3.4.21.-] D KQP88_17185 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D KQP88_21260 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D KQP88_10530 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D KQP88_14080 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D KQP88_07460 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D KQP88_07470 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D KQP88_19055 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D KQP88_15105 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D KQP88_19130 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D KQP88_23405 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D KQP88_23965 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D KQP88_17030 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D KQP88_23645 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D KQP88_16530 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D KQP88_10755 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D KQP88_16295 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D KQP88_08050 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D KQP88_23265 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D KQP88_03365 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_08995 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KQP88_13290 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D KQP88_20290 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D KQP88_20300 tldD; metalloprotease TldD K03568 tldD; TldD protein D KQP88_12870 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin D KQP88_24780 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D KQP88_02760 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D KQP88_02755 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:plij01003] D KQP88_10940 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D KQP88_23195 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D KQP88_04005 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D KQP88_01870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KQP88_15215 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D KQP88_15225 glycosyltransferase family 4 protein K21001 pslH; polysaccharide biosynthesis protein PslH D KQP88_15230 glycosyltransferase family 4 protein K21002 pslI; polysaccharide biosynthesis protein PslI D KQP88_04850 alg8; mannuronan synthase K19290 alg8; mannuronan synthase [EC:2.4.1.33] D KQP88_23390 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:plij01005] D KQP88_06135 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D KQP88_06140 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D KQP88_19965 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D KQP88_06125 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D KQP88_07375 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D KQP88_16565 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D KQP88_00065 lysophospholipid acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D KQP88_16910 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D KQP88_17140 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D KQP88_02600 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D KQP88_04280 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D KQP88_17245 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D KQP88_06170 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D KQP88_16555 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D KQP88_20210 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D KQP88_02505 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D KQP88_02500 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D KQP88_02510 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D KQP88_02515 rfaP; lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D KQP88_02925 glycosyltransferase K12988 wapR; alpha-1,3-rhamnosyltransferase [EC:2.4.1.-] D KQP88_20065 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D KQP88_00045 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D KQP88_02575 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D KQP88_17735 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:plij01011] D KQP88_20175 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D KQP88_16550 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D KQP88_19990 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D KQP88_20005 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D KQP88_20020 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D KQP88_18940 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_19985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KQP88_00825 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D KQP88_04275 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D KQP88_08050 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D KQP88_20010 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D KQP88_19995 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D KQP88_10860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D KQP88_20730 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D KQP88_01870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KQP88_04005 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D KQP88_11255 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KQP88_21280 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KQP88_20025 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D KQP88_21260 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D KQP88_14080 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D KQP88_10530 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D KQP88_23195 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D KQP88_14290 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D KQP88_15160 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D KQP88_00680 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D KQP88_21240 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D KQP88_21270 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D KQP88_07535 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D KQP88_05680 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D KQP88_16480 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D KQP88_20355 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D KQP88_21265 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D KQP88_24750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_02730 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_00155 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_20410 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:plij01004] D KQP88_16505 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D KQP88_12835 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_13425 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_15965 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_16120 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KQP88_01965 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D KQP88_14485 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D KQP88_01950 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_10215 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_16490 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KQP88_01955 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_08315 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_16500 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_19800 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_22200 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KQP88_14480 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D KQP88_06130 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D KQP88_07505 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D KQP88_14300 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D KQP88_20945 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D KQP88_24570 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D KQP88_01460 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D KQP88_10390 alpha/beta fold hydrolase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D KQP88_10400 amino acid adenylation domain-containing protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D KQP88_03895 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_06550 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KQP88_18470 fadD1; long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D KQP88_05980 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D KQP88_16510 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D KQP88_02995 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D KQP88_00040 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:plij01008] D KQP88_21630 type III polyketide synthase K19580 rppA; 1,3,6,8-tetrahydroxynaphthalene synthase [EC:2.3.1.233] D KQP88_12500 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein D KQP88_14910 MbtH family protein K05375 mbtH; MbtH protein D KQP88_18120 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D KQP88_10390 alpha/beta fold hydrolase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D KQP88_10400 amino acid adenylation domain-containing protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase D KQP88_10375 AMP-binding protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D KQP88_12765 amino acid adenylation domain-containing protein K16126 syrB1; L-threonine---[L-threonyl-carrier protein] ligase [EC:6.2.1.70] D KQP88_12770 chlorinating enzyme K15650 cmaB; non-haem Fe2+, alpha-ketoglutarate-dependent halogenase D KQP88_10385 Gfo/Idh/MocA family oxidoreductase K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D KQP88_10380 alpha/beta fold hydrolase K05374 irp4; yersiniabactin synthetase, thioesterase component D KQP88_09670 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:plij01006] D KQP88_21540 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D KQP88_20765 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D KQP88_06095 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D KQP88_02740 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D KQP88_24505 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D KQP88_00255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_05255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:plij01007] D KQP88_14740 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KQP88_07385 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D KQP88_03945 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D KQP88_21995 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KQP88_20120 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D KQP88_07390 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D KQP88_23255 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KQP88_13145 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_18715 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_20720 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D KQP88_04970 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D KQP88_21220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KQP88_05880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D KQP88_06400 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KQP88_05535 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D KQP88_00055 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D KQP88_00050 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D KQP88_08900 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D KQP88_06365 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D KQP88_13820 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D KQP88_06635 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D KQP88_13800 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D KQP88_13795 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D KQP88_11635 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_13645 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KQP88_17620 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D KQP88_02230 alaC; alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D KQP88_24010 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_14750 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D KQP88_05555 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D KQP88_06060 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D KQP88_19705 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_20160 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D KQP88_22735 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D KQP88_03285 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D KQP88_01445 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D KQP88_11575 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D KQP88_06590 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D KQP88_01325 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D KQP88_12110 diaminobutyrate--2-oxoglutarate transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D KQP88_12495 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D KQP88_14915 aspartate aminotransferase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D KQP88_23675 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D KQP88_22900 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D KQP88_21170 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D KQP88_05260 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_21015 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KQP88_17775 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D KQP88_09150 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D KQP88_09160 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:plij00194] D KQP88_25080 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D KQP88_25085 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D KQP88_25090 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D KQP88_25095 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D KQP88_25100 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D KQP88_25105 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D KQP88_25110 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D KQP88_25115 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D KQP88_25120 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:plij03000] D KQP88_18210 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KQP88_16160 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D KQP88_04690 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D KQP88_17530 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D KQP88_21165 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D KQP88_13100 ftrA; transcriptional regulator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D KQP88_12255 GlxA family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D KQP88_06585 argR; transcriptional regulator ArgR K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D KQP88_02195 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D KQP88_00880 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D KQP88_06825 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D KQP88_06870 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D KQP88_14020 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D KQP88_18930 metR; transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D KQP88_10560 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D KQP88_00490 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D KQP88_19690 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D KQP88_14255 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D KQP88_22915 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D KQP88_03605 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D KQP88_04080 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D KQP88_08565 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D KQP88_09545 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D KQP88_11265 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D KQP88_10100 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D KQP88_13650 nac; nitrogen assimilation transcriptional regulator NAC K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D KQP88_24605 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D KQP88_09680 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D KQP88_18145 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D KQP88_03280 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D KQP88_24670 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D KQP88_00385 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D KQP88_18835 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D KQP88_06965 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D KQP88_13860 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D KQP88_10315 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D KQP88_09465 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D KQP88_20395 cra; catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D KQP88_01715 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D KQP88_12570 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D KQP88_15335 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D KQP88_23445 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D KQP88_09360 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D KQP88_01145 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D KQP88_03515 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D KQP88_03710 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D KQP88_09770 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D KQP88_09775 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D KQP88_15305 glcC; transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D KQP88_24640 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D KQP88_10495 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator D KQP88_02175 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D KQP88_19430 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D KQP88_03270 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D KQP88_07640 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D KQP88_15265 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D KQP88_13170 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D KQP88_15435 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D KQP88_05960 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D KQP88_10360 transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D KQP88_22635 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D KQP88_00810 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_10180 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_11230 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_21115 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_01295 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D KQP88_12180 helix-turn-helix transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D KQP88_12610 helix-turn-helix transcriptional regulator K20330 toxJ; LuxR family transcriptional regulator, activator of tox operons D KQP88_04475 LuxR C-terminal-related transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D KQP88_15655 winged helix DNA-binding protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D KQP88_16615 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D KQP88_17660 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D KQP88_03145 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D KQP88_04325 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D KQP88_03735 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D KQP88_00205 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D KQP88_19470 pcaR; pca regulon transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D KQP88_01500 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_22055 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D KQP88_07850 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D KQP88_05470 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D KQP88_24680 hexR; transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D KQP88_05120 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D KQP88_21960 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D KQP88_22380 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D KQP88_15935 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D KQP88_07395 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D KQP88_12940 sigma 54-interacting transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D KQP88_11540 sigma 54-interacting transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D KQP88_12405 sigma 54-interacting transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D KQP88_11195 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D KQP88_09450 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D KQP88_22750 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein D KQP88_06325 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D KQP88_02095 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D KQP88_17840 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D KQP88_25125 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D KQP88_08620 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D KQP88_05025 sigma-54-dependent transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D KQP88_17295 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor D KQP88_00980 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D KQP88_23100 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D KQP88_24645 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D KQP88_23090 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D KQP88_03950 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D KQP88_08425 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D KQP88_21595 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D KQP88_20040 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:plij03021] D KQP88_13525 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D KQP88_21735 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D KQP88_21895 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D KQP88_21890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D KQP88_00530 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D KQP88_02975 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D KQP88_06230 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D KQP88_23465 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D KQP88_00645 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D KQP88_14120 sigX; RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D KQP88_19155 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D KQP88_02320 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_04650 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_13610 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_11710 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_04625 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_24370 sigma-70 family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D KQP88_23200 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D KQP88_20230 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D KQP88_25025 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_15815 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_18495 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D KQP88_03835 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D KQP88_21570 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D KQP88_21920 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D KQP88_20080 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D KQP88_20075 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D KQP88_18325 PAS domain-containing sensor histidine kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D KQP88_18330 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ D KQP88_19150 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA D KQP88_19145 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB D KQP88_03950 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D KQP88_08425 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D KQP88_03775 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D KQP88_14315 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D KQP88_01155 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:plij03019] D KQP88_16545 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D KQP88_20315 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D KQP88_19120 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D KQP88_02790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D KQP88_02705 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D KQP88_04890 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D KQP88_20975 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D KQP88_22875 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D KQP88_17635 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D KQP88_16620 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D KQP88_06175 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KQP88_03860 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D KQP88_01155 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D KQP88_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D KQP88_19780 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KQP88_02745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D KQP88_01115 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D KQP88_03925 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D KQP88_23565 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D KQP88_06645 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_15350 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_16835 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D KQP88_14140 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D KQP88_20245 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D KQP88_18465 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D KQP88_21095 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:plij03011] D KQP88_17755 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D KQP88_06075 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D KQP88_21830 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D KQP88_21740 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D KQP88_21775 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D KQP88_02800 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D KQP88_21880 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D KQP88_21790 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D KQP88_20100 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D KQP88_21865 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D KQP88_21745 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D KQP88_21885 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D KQP88_21750 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D KQP88_21795 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D KQP88_03855 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D KQP88_05750 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D KQP88_21815 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D KQP88_02805 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D KQP88_21840 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D KQP88_20735 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D KQP88_02985 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D KQP88_21910 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D KQP88_21845 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D KQP88_21860 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D KQP88_21855 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D KQP88_21800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D KQP88_21785 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D KQP88_02815 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D KQP88_21905 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D KQP88_21915 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D KQP88_21900 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D KQP88_20105 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D KQP88_21810 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D KQP88_21765 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D KQP88_21825 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D KQP88_21730 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D KQP88_21780 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D KQP88_05765 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D KQP88_13805 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D KQP88_20760 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D KQP88_21835 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D KQP88_21850 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D KQP88_21805 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D KQP88_20755 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D KQP88_00755 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D KQP88_21820 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D KQP88_21770 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D KQP88_23245 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D KQP88_18945 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D KQP88_16515 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D KQP88_00760 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D KQP88_25165 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D KQP88_13810 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D KQP88_21755 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D KQP88_04225 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D KQP88_03315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24385 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_04075 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_06775 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_08700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_21965 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24410 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_03295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_04055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_06755 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_08680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_21985 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_04070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_06770 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_03310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_08695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_21970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_24395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:plij03009] D KQP88_19120 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D KQP88_03140 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D KQP88_02705 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D KQP88_19115 era; GTPase Era K03595 era; GTPase D KQP88_20750 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D KQP88_03950 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D KQP88_08425 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D KQP88_03835 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D KQP88_21570 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D KQP88_21920 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D KQP88_19280 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D KQP88_03045 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D KQP88_00075 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D KQP88_04445 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D KQP88_23230 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D KQP88_22905 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D KQP88_25135 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D KQP88_20035 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D KQP88_20050 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D KQP88_05955 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D KQP88_05990 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D KQP88_02795 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D KQP88_03790 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D KQP88_04965 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D KQP88_20895 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D KQP88_21285 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D KQP88_01820 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D KQP88_03880 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D KQP88_11455 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D KQP88_02470 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D KQP88_14090 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D KQP88_07990 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D KQP88_05515 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D KQP88_18025 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D KQP88_13960 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D KQP88_16930 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D KQP88_17325 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D KQP88_16540 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D KQP88_20640 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D KQP88_21130 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D KQP88_06310 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D KQP88_04115 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D KQP88_23935 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D KQP88_05755 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D KQP88_06320 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D KQP88_07100 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D KQP88_22365 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D KQP88_08115 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D KQP88_08815 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D KQP88_16545 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D KQP88_20315 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D KQP88_23095 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D KQP88_02145 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D KQP88_17635 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D KQP88_02700 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D KQP88_05550 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D KQP88_02750 hflX; GTPase HflX K03665 hflX; GTPase D KQP88_00100 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D KQP88_00525 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D KQP88_03845 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D KQP88_03830 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D KQP88_21290 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D KQP88_21195 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D KQP88_03785 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein D KQP88_20295 ribosome-associated protein K09889 yjgA; ribosome-associated protein D KQP88_14095 ribosome modulation factor K03812 rmf; ribosome modulation factor D KQP88_20235 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D KQP88_04215 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D KQP88_16520 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:plij03016] D KQP88_03010 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D KQP88_14740 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KQP88_06365 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D KQP88_20720 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D KQP88_21220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KQP88_13145 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_18715 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KQP88_07385 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D KQP88_23255 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KQP88_05880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D KQP88_06400 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KQP88_06635 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D KQP88_13820 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D KQP88_08900 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D KQP88_07390 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D KQP88_04970 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D KQP88_05535 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D KQP88_13800 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D KQP88_13795 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D KQP88_21995 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KQP88_20120 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D KQP88_23400 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D KQP88_22035 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D KQP88_23175 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D KQP88_06300 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D KQP88_16425 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D KQP88_03850 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D KQP88_06210 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D KQP88_05475 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_08660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_00100 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D KQP88_02740 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D KQP88_25145 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D KQP88_25140 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D KQP88_24285 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D KQP88_25160 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D KQP88_20045 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D KQP88_18780 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D KQP88_00545 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D KQP88_17240 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D KQP88_20820 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D KQP88_00055 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D KQP88_00050 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D KQP88_03945 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D KQP88_18820 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D KQP88_14970 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D KQP88_22375 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D KQP88_14705 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D KQP88_21185 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D KQP88_19095 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D KQP88_19100 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D KQP88_22215 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D KQP88_20920 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D KQP88_05760 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D KQP88_05460 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D KQP88_07005 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D KQP88_23775 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D KQP88_13960 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D KQP88_16930 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D KQP88_08830 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D KQP88_18080 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D KQP88_07995 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D KQP88_17310 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D KQP88_08925 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D KQP88_08930 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D KQP88_08935 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D KQP88_08920 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D KQP88_05485 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D KQP88_19175 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D KQP88_07355 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D KQP88_16795 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D KQP88_05425 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D KQP88_06465 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D KQP88_08705 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D KQP88_06460 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D KQP88_15015 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D KQP88_02715 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D KQP88_05430 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D KQP88_01780 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D KQP88_06160 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D KQP88_05930 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D KQP88_02990 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D KQP88_02725 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D KQP88_06005 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D KQP88_02790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D KQP88_03860 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:plij03012] D KQP88_22325 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D KQP88_03840 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D KQP88_13815 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D KQP88_01065 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D KQP88_06080 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D KQP88_21870 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D KQP88_21875 fusA; elongation factor G K02355 fusA; elongation factor G D KQP88_04260 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D KQP88_06090 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D KQP88_04265 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D KQP88_04220 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D KQP88_08865 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D KQP88_17675 elongation factor P K02356 efp; elongation factor P D KQP88_05875 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D KQP88_03385 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D KQP88_21235 arfA; ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor D KQP88_06525 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:plij03110] D KQP88_08860 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D KQP88_20630 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D KQP88_07465 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D KQP88_23270 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D KQP88_14500 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D KQP88_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D KQP88_05495 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D KQP88_19385 molecular chaperone HscC K04045 hscC; molecular chaperone HscC D KQP88_22560 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D KQP88_19780 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KQP88_03755 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D KQP88_22550 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D KQP88_03075 TerB family tellurite resistance protein K05801 djlA; DnaJ like chaperone protein D KQP88_05490 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D KQP88_23915 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D KQP88_03745 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D KQP88_14700 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D KQP88_23920 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D KQP88_19785 co-chaperone GroES K04078 groES; chaperonin GroES D KQP88_19140 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D KQP88_03795 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D KQP88_25115 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D KQP88_23940 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D KQP88_10440 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D KQP88_22465 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D KQP88_18440 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D KQP88_07380 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D KQP88_07480 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D KQP88_17055 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D KQP88_20775 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D KQP88_20710 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D KQP88_04500 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D KQP88_13470 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D KQP88_13515 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D KQP88_03055 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D KQP88_01150 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D KQP88_21610 trxA; thioredoxin K05838 ybbN; putative thioredoxin D KQP88_23945 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D KQP88_18795 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D KQP88_00170 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D KQP88_01040 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D KQP88_05230 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D KQP88_05775 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D KQP88_22345 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D KQP88_15720 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:plij04131] D KQP88_05510 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D KQP88_04440 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D KQP88_05060 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KQP88_15070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KQP88_19560 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D KQP88_14500 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:plij03051] D KQP88_14500 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:plij03032] D KQP88_07550 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D KQP88_18210 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KQP88_24485 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D KQP88_04960 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D KQP88_07475 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D KQP88_13790 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D KQP88_17750 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D KQP88_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D KQP88_02820 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D KQP88_02980 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D KQP88_21705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D KQP88_06150 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KQP88_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KQP88_04980 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D KQP88_21230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KQP88_16470 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KQP88_07555 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_20980 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_22830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_07830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KQP88_06145 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D KQP88_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D KQP88_02350 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_07755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_17975 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D KQP88_17780 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D KQP88_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D KQP88_02655 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D KQP88_02640 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D KQP88_13195 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D KQP88_15125 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D KQP88_09710 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:plij03036] D KQP88_18210 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KQP88_19120 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D KQP88_24485 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D KQP88_04960 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D KQP88_07475 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D KQP88_13790 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D KQP88_17750 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D KQP88_22550 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D KQP88_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D KQP88_06390 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D KQP88_22380 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D KQP88_02745 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D KQP88_19690 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D KQP88_00810 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_10180 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_11230 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_21115 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D KQP88_04955 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D KQP88_07745 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D KQP88_17340 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D KQP88_17335 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D KQP88_19975 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D KQP88_06180 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D KQP88_23210 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D KQP88_20025 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D KQP88_08880 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D KQP88_20030 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D KQP88_19980 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D KQP88_20000 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D KQP88_23205 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D KQP88_19970 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D KQP88_07750 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D KQP88_01230 cell division protein ZapA K09888 zapA; cell division protein ZapA D KQP88_02215 cell division protein ZapA K09888 zapA; cell division protein ZapA D KQP88_01235 TIGR02449 family protein K09892 zapB; cell division protein ZapB D KQP88_15580 AFG1 family ATPase K06916 zapE; cell division protein ZapE D KQP88_20115 cell division protein ZapE K06916 zapE; cell division protein ZapE D KQP88_24750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_02730 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KQP88_10040 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_12480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_13265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19435 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19735 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_16915 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D KQP88_16920 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D KQP88_16925 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D KQP88_15110 CDP-glycerol--UDP-pyrophosphoryl-N-acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase K13053 sulA; cell division inhibitor SulA D KQP88_20335 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D KQP88_20330 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D KQP88_20325 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D KQP88_21275 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D KQP88_25130 ParA family protein K03496 parA; chromosome partitioning protein D KQP88_02050 ParA family protein K03496 parA; chromosome partitioning protein D KQP88_15780 ParA family protein K03496 parA; chromosome partitioning protein D KQP88_25125 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D KQP88_02655 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D KQP88_02640 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D KQP88_25140 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D KQP88_25135 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D KQP88_00945 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D KQP88_05770 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D KQP88_18710 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D KQP88_09460 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D KQP88_00180 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:plij03400] D KQP88_21160 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D KQP88_04320 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D KQP88_19215 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D KQP88_21305 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D KQP88_24045 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D KQP88_18745 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D KQP88_13525 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D KQP88_10600 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D KQP88_19860 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D KQP88_00730 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D KQP88_21165 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D KQP88_00060 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D KQP88_01830 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D KQP88_00700 crc; catabolite repression control protein Crc K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D KQP88_11860 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D KQP88_05820 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KQP88_02350 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_07755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KQP88_00185 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D KQP88_21715 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D KQP88_14745 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D KQP88_13445 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D KQP88_24690 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KQP88_05615 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KQP88_21895 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D KQP88_21890 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D KQP88_21735 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D KQP88_00530 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D KQP88_15075 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D KQP88_06240 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D KQP88_02735 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D KQP88_19505 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D KQP88_05585 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D KQP88_21535 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D KQP88_06150 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KQP88_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KQP88_04980 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D KQP88_21230 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KQP88_16470 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KQP88_07555 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_20980 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_22830 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KQP88_07830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KQP88_21705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D KQP88_03325 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D KQP88_03320 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D KQP88_03330 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D KQP88_06255 recA; recombinase RecA K03553 recA; recombination protein RecA D KQP88_06415 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D KQP88_06420 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D KQP88_06410 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D KQP88_23250 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D KQP88_07200 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D KQP88_07205 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11 D KQP88_20875 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D KQP88_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D KQP88_00485 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D KQP88_19110 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D KQP88_07840 recR; recombination mediator RecR K06187 recR; recombination protein RecR D KQP88_03740 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D KQP88_17105 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D KQP88_05310 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 D KQP88_19485 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D KQP88_08500 Ku protein K10979 ku; DNA end-binding protein Ku D KQP88_08505 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D KQP88_17780 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D KQP88_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D KQP88_13195 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D KQP88_15125 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D KQP88_24485 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D KQP88_04960 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D KQP88_07475 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D KQP88_22380 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D KQP88_13790 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D KQP88_17750 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D KQP88_16620 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D KQP88_06355 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D KQP88_15105 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D KQP88_11595 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D KQP88_06260 recX; recombination regulator RecX K03565 recX; regulatory protein D KQP88_00865 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D KQP88_18585 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D KQP88_18140 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D KQP88_18170 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:plij03029] D KQP88_20090 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D KQP88_03840 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D KQP88_13815 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D KQP88_06080 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D KQP88_21870 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D KQP88_21875 fusA; elongation factor G K02355 fusA; elongation factor G D KQP88_19115 era; GTPase Era K03595 era; GTPase D KQP88_21995 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KQP88_21220 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KQP88_06400 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KQP88_23255 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KQP88_20345 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D KQP88_20350 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D KQP88_20340 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D KQP88_21705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D KQP88_06115 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D KQP88_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D KQP88_03745 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D KQP88_19780 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KQP88_19785 co-chaperone GroES K04078 groES; chaperonin GroES D KQP88_03755 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D KQP88_05475 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_08660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_05490 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D KQP88_18795 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D KQP88_18710 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D KQP88_00255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_05255 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D KQP88_00285 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D KQP88_00260 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D KQP88_25150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D KQP88_00270 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D KQP88_00250 SCO family protein K07152 SCO1; protein SCO1 D KQP88_10435 SCO family protein K07152 SCO1; protein SCO1 D KQP88_14500 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:plij02000] D KQP88_10410 ABC transporter ATP-binding protein/permease K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D KQP88_10405 ABC transporter ATP-binding protein/permease K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D KQP88_02560 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D KQP88_01410 ABC transporter ATP-binding protein/permease K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D KQP88_20575 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D KQP88_18445 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D KQP88_07300 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D KQP88_08010 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D KQP88_16645 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D KQP88_11035 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D KQP88_17825 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D KQP88_12160 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D KQP88_12590 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D KQP88_14770 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D KQP88_12755 cyclic peptide export ABC transporter K06161 syrD; putative syringomycin transport system ATP-binding/permease protein D KQP88_14800 cyclic peptide export ABC transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D KQP88_12510 cyclic peptide export ABC transporter K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D KQP88_03510 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D KQP88_09815 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D KQP88_15155 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D KQP88_15695 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D KQP88_01475 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D KQP88_01480 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D KQP88_01485 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D KQP88_01490 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D KQP88_13180 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D KQP88_13185 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D KQP88_13190 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D KQP88_09580 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D KQP88_09585 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D KQP88_09590 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D KQP88_23755 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D KQP88_23765 tauC; taurine ABC transporter permease TauC K15552 tauC; taurine transport system permease protein D KQP88_23760 tauB; taurine ABC transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D KQP88_23715 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_23750 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_01545 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_01730 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_09255 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_11050 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_12635 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_13320 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_17515 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D KQP88_23710 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D KQP88_01540 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D KQP88_09260 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D KQP88_12640 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D KQP88_23705 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_01535 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_09265 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_12645 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D KQP88_01260 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D KQP88_09120 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D KQP88_01265 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D KQP88_18815 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D KQP88_23665 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_23670 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_06675 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_12015 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D KQP88_23650 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D KQP88_23655 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D KQP88_23660 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D KQP88_03100 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_10475 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_11365 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_16955 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_22780 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D KQP88_03110 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_10465 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_11385 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_16970 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_22770 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_22775 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D KQP88_03105 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_10470 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_11390 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_16965 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D KQP88_03095 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_10460 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_11395 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_16975 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_22765 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D KQP88_23495 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_00445 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_02190 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_12260 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_15470 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_16870 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D KQP88_23500 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D KQP88_02185 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D KQP88_23505 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D KQP88_02180 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D KQP88_03395 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D KQP88_03390 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D KQP88_03400 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D KQP88_03405 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D KQP88_19230 putative urea ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D KQP88_24820 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D KQP88_19235 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D KQP88_24815 AAA-associated domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D KQP88_19240 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D KQP88_10640 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D KQP88_05105 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D KQP88_05090 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D KQP88_05095 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D KQP88_05100 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D KQP88_11695 substrate-binding domain-containing protein K10537 araF; L-arabinose transport system substrate-binding protein D KQP88_11705 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D KQP88_11700 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D KQP88_06975 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D KQP88_06985 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D KQP88_06980 xylG; D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D KQP88_13875 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D KQP88_13865 ABC transporter permease K10440 rbsC; ribose transport system permease protein D KQP88_13870 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D KQP88_08410 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D KQP88_12955 sugar ABC transporter substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein D KQP88_08420 ABC transporter permease K17214 K17214; inositol transport system permease protein D KQP88_08415 sugar ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D KQP88_07430 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D KQP88_07415 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D KQP88_07420 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D KQP88_07405 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D KQP88_07410 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D KQP88_09930 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D KQP88_09935 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D KQP88_09940 ABC transporter permease subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D KQP88_09945 ATP-binding cassette domain-containing protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D KQP88_10655 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D KQP88_10650 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D KQP88_10645 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D KQP88_03195 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D KQP88_03255 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D KQP88_03250 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D KQP88_03260 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D KQP88_20195 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D KQP88_20200 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D KQP88_20205 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D KQP88_20190 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D KQP88_20185 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D KQP88_12095 substrate-binding domain-containing protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D KQP88_12090 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D KQP88_12085 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D KQP88_24560 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D KQP88_09525 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D KQP88_11855 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein D KQP88_24555 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D KQP88_09530 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D KQP88_24550 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D KQP88_09535 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D KQP88_24545 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D KQP88_09540 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D KQP88_18680 ABC transporter permease K10015 hisM; histidine transport system permease protein D KQP88_18675 ABC transporter permease K10016 hisQ; histidine transport system permease protein D KQP88_18690 ATP-binding cassette domain-containing protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_18670 transporter substrate-binding domain-containing protein K10014 hisJ; histidine transport system substrate-binding protein D KQP88_18845 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D KQP88_18855 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein D KQP88_18850 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D KQP88_18860 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D KQP88_04900 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D KQP88_04905 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D KQP88_04910 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D KQP88_04915 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_01695 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KQP88_01690 tcyL; cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D KQP88_01685 yecC; L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_06560 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D KQP88_06570 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D KQP88_06565 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D KQP88_06580 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_02860 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D KQP88_18520 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D KQP88_02865 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D KQP88_18525 livH; high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D KQP88_02870 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D KQP88_18530 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D KQP88_02875 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D KQP88_18535 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D KQP88_02880 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D KQP88_18540 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D KQP88_00240 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D KQP88_01525 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D KQP88_01660 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D KQP88_00235 ABC transporter permease K02072 metI; D-methionine transport system permease protein D KQP88_01650 ABC transporter permease K02072 metI; D-methionine transport system permease protein D KQP88_00230 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D KQP88_01655 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D KQP88_22480 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D KQP88_22490 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D KQP88_22495 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D KQP88_22500 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D KQP88_22505 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D KQP88_24115 ABC transporter substrate-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D KQP88_24120 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D KQP88_24125 ABC transporter permease K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D KQP88_24110 ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D KQP88_23980 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_01140 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_02130 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_04385 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_06855 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_09020 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_11620 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_11625 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_13705 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_14600 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_17075 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_18185 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_08980 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KQP88_01130 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_01135 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_04380 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_08985 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_09010 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_09015 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_11640 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_11645 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_13690 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_13695 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_17085 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D KQP88_18180 amino acid ABC transporter permease/ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_01125 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_08990 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_11650 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_13700 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_17080 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KQP88_00750 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03460 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03470 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03475 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03480 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KQP88_03455 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein D KQP88_03450 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein D KQP88_03445 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D KQP88_03440 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D KQP88_23850 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_09635 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_09805 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_11335 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_12200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_12670 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_12895 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D KQP88_23845 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_09630 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_09800 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_11315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_12205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_12665 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_12900 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D KQP88_23840 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_09625 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_09795 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_11320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_12210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_12660 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_12905 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D KQP88_23835 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_09620 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_09790 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_11325 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_12215 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_12655 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_12910 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D KQP88_09615 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_09785 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_11330 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_12220 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D KQP88_01360 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_07525 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_07530 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_13475 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KQP88_01355 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D KQP88_07520 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D KQP88_13480 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D KQP88_01350 ABC transporter permease K13895 yejE; microcin C transport system permease protein D KQP88_07515 ABC transporter permease K13895 yejE; microcin C transport system permease protein D KQP88_13485 ABC transporter permease K13895 yejE; microcin C transport system permease protein D KQP88_01345 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D KQP88_07510 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D KQP88_13490 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D KQP88_03215 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB K23181 fecB; ferric citrate transport system substrate-binding protein D KQP88_03205 iron chelate uptake ABC transporter family permease subunit K23182 fecD; ferric citrate transport system permease protein D KQP88_03210 fecC; iron-dicitrate ABC transporter permease FecC K23183 fecC; ferric citrate transport system permease protein D KQP88_03200 fecE; Fe(3+) dicitrate ABC transporter ATP-binding protein FecE K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D KQP88_12555 ABC transporter ATP-binding protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18] D KQP88_03970 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D KQP88_03975 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D KQP88_03980 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D KQP88_12550 iron ABC transporter permease K25110 sirB; iron-siderophore transport system permease protein D KQP88_12545 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein D KQP88_09765 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D KQP88_12540 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D KQP88_09760 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D KQP88_09755 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D KQP88_00200 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D KQP88_14885 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D KQP88_00215 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D KQP88_14895 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D KQP88_00210 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D KQP88_14890 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D KQP88_11675 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D KQP88_11670 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D KQP88_11665 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D KQP88_00600 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D KQP88_00595 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D KQP88_04990 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D KQP88_04995 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D KQP88_20225 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D KQP88_15020 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D KQP88_15030 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D KQP88_15025 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D KQP88_15735 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D KQP88_15740 heme ABC transporter permease K02195 ccmC; heme exporter protein C D KQP88_15745 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D KQP88_15750 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D KQP88_23205 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D KQP88_23210 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D KQP88_16585 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D KQP88_16590 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D KQP88_14310 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D KQP88_16050 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D KQP88_16805 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D KQP88_21645 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D KQP88_14305 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D KQP88_16055 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D KQP88_16800 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D KQP88_21640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D KQP88_03130 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D KQP88_17710 anion permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D KQP88_00875 NorM family multidrug efflux MATE transporter K26939 norM; MATE family, multidrug efflux pump D KQP88_22310 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D KQP88_19395 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D KQP88_19450 metabolite/H+ symporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT D KQP88_16320 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D KQP88_24565 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D KQP88_03525 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D KQP88_12575 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D KQP88_13980 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D KQP88_06850 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter D KQP88_07110 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter D KQP88_07130 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter D KQP88_14640 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D KQP88_14005 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D KQP88_23475 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D KQP88_04920 CynX/NimT family MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D KQP88_08135 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D KQP88_01175 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D KQP88_19815 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D KQP88_03165 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D KQP88_04150 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D KQP88_10065 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D KQP88_19665 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D KQP88_07370 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D KQP88_12470 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D KQP88_05400 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D KQP88_16315 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D KQP88_01940 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D KQP88_10395 MFS transporter K05373 ybtX; MFS transporter, putative signal transducer D KQP88_23560 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D KQP88_20250 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D KQP88_20390 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D KQP88_20380 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D KQP88_20240 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D KQP88_18825 aquaporin K02440 glpF; glycerol uptake facilitator D KQP88_15690 ion transporter K10716 kch; voltage-gated potassium channel D KQP88_16265 potassium channel protein K10716 kch; voltage-gated potassium channel D KQP88_00925 ammonium transporter K03320 amt; ammonium transporter, Amt family D KQP88_11175 ammonium transporter K03320 amt; ammonium transporter, Amt family D KQP88_01000 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_06730 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_08075 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_11985 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_16595 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_19865 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D KQP88_20080 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D KQP88_07215 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D KQP88_07220 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D KQP88_08940 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D KQP88_20880 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D KQP88_02075 mscK; mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel D KQP88_19835 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D KQP88_21675 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D KQP88_06670 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D KQP88_24995 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_25045 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D KQP88_02690 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_15790 flagellar motor protein K02556 motA; chemotaxis protein MotA D KQP88_25000 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_25050 OmpA family protein K02557 motB; chemotaxis protein MotB D KQP88_02695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_15785 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D KQP88_18770 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D KQP88_00505 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB D KQP88_01375 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D KQP88_09910 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D KQP88_10450 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D KQP88_16575 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D KQP88_00500 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D KQP88_01370 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D KQP88_16570 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D KQP88_10455 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D KQP88_06430 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D KQP88_09850 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D KQP88_06435 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D KQP88_09855 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D KQP88_09905 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D KQP88_08230 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D KQP88_12750 magnesium transporter CorA family protein K03284 corA; magnesium transporter D KQP88_07625 transporter K16074 zntB; zinc transporter D KQP88_14135 zinc transporter ZntB K16074 zntB; zinc transporter D KQP88_08895 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D KQP88_24630 effector protein K08994 yneE; ion channel-forming bestrophin family protein D KQP88_24520 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D KQP88_05735 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D KQP88_14115 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D KQP88_06490 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D KQP88_17890 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D KQP88_05190 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D KQP88_22190 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D KQP88_04835 alginate export family protein K16081 algE; alginate production protein D KQP88_04640 TonB-dependent receptor family protein K16091 fecA; Fe(3+) dicitrate transport protein D KQP88_10415 TonB-dependent receptor K15721 fyuA; pesticin/yersiniabactin receptor D KQP88_04165 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D KQP88_14805 TonB-dependent receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D KQP88_14810 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D KQP88_05650 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D KQP88_03350 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D KQP88_05045 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D KQP88_24380 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_01365 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_01720 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_02310 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_04680 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_08960 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_09420 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_09665 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_09900 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_10425 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_11045 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_11590 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_11720 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_12070 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_12100 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_12560 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_12685 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_12690 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_13040 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_13370 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_13620 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_15490 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_15525 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_17090 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_18305 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_19020 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_13250 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_13330 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KQP88_11430 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16640 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D KQP88_11095 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system D KQP88_12175 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_13255 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_19445 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_15205 polysaccharide export protein K20987 pslD; polysaccharide biosynthesis/export protein PslD D KQP88_08585 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D KQP88_05110 carbohydrate porin K07267 oprB; porin D KQP88_06370 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D KQP88_06115 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D KQP88_05545 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D KQP88_17285 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D KQP88_20645 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D KQP88_03730 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D KQP88_11865 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA D KQP88_11870 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D KQP88_09780 oligogalacturonate-specific porin KdgM family protein K22110 kdgM; oligogalacturonate-specific porin family protein D KQP88_20220 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D KQP88_20215 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D KQP88_03060 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D KQP88_21225 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D KQP88_21200 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein D KQP88_21325 CidA/LrgA family protein K06518 cidA; holin-like protein D KQP88_24025 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP D KQP88_24100 gabP; GABA permease K11735 gabP; GABA permease D KQP88_06885 amino acid permease K11735 gabP; GABA permease D KQP88_23520 amino acid permease K16234 hutT; histidine transporter D KQP88_08035 eat; ethanolamine permease K16238 eat; ethanolamine permease D KQP88_21105 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D KQP88_08175 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D KQP88_20265 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D KQP88_11440 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D KQP88_10350 multidrug efflux RND transporter permease subunit K18296 mexD; multidrug efflux pump D KQP88_11100 efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump D KQP88_05970 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D KQP88_05165 multidrug efflux RND transporter permease subunit K21133 mexN; multidrug efflux pump D KQP88_10045 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_12475 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19440 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19740 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_10270 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_01635 efflux RND transporter permease subunit K21134 triC; multidrug efflux pump D KQP88_09375 efflux RND transporter permease subunit K21134 triC; multidrug efflux pump D KQP88_11885 MdtB/MuxB family multidrug efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump D KQP88_11890 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump D KQP88_02595 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D KQP88_21515 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D KQP88_08675 rhtA; threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA D KQP88_15575 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D KQP88_22795 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D KQP88_16840 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D KQP88_07085 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D KQP88_15345 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D KQP88_22850 transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D KQP88_03705 lactate permease LctP family transporter K03303 lutP; lactate permease D KQP88_01710 betT; choline transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D KQP88_03220 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D KQP88_20360 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D KQP88_19480 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D KQP88_02100 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D KQP88_16860 cation acetate symporter K14393 actP; cation/acetate symporter D KQP88_00450 gltP; glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein D KQP88_04090 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_09740 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_18095 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_18155 dctA; C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D KQP88_23455 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D KQP88_18560 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D KQP88_11360 sodium:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D KQP88_02080 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D KQP88_13930 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D KQP88_24705 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D KQP88_17390 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D KQP88_00070 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D KQP88_04355 uracil-xanthine permease family protein K02824 uraA; uracil permease D KQP88_03275 purine permease K16345 xanP; xanthine permease XanP D KQP88_20915 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D KQP88_17705 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D KQP88_08060 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D KQP88_08965 chrA; chromate efflux transporter K07240 chrA; chromate transporter D KQP88_00120 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D KQP88_15585 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D KQP88_00470 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D KQP88_12080 arsenic transporter K03893 arsB; arsenical pump membrane protein D KQP88_08470 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D KQP88_08465 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D KQP88_08460 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D KQP88_08455 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D KQP88_08450 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D KQP88_08445 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D KQP88_20730 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D KQP88_09595 AEC family transporter K13936 mdcF; malonate transporter and related proteins D KQP88_20365 AEC family transporter K24180 mleP; malate permease and related proteins D KQP88_06330 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D KQP88_16455 LysE family translocator K06895 lysE; L-lysine exporter family protein LysE/ArgO D KQP88_19695 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D KQP88_01075 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D KQP88_02355 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D KQP88_13115 LysE family transporter K05835 rhtC; threonine efflux protein D KQP88_04455 LysE family transporter K05835 rhtC; threonine efflux protein D KQP88_00415 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D KQP88_00420 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D KQP88_19205 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D KQP88_19200 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D KQP88_19195 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D KQP88_17305 AI-2E family transporter K03548 perM; putative permease D KQP88_22400 MarC family protein K05595 marC; multiple antibiotic resistance protein D KQP88_20000 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D KQP88_04440 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D KQP88_01100 cytochrome c/FTR1 family iron permease K07243 FTR; high-affinity iron transporter D KQP88_15595 FTR1 family protein K07243 FTR; high-affinity iron transporter D KQP88_15610 efeO; iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO D KQP88_15605 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D KQP88_20865 carbon starvation protein A K23676 btsT; pyruvate/proton symporter D KQP88_00495 energy transducer TonB K03832 tonB; periplasmic protein TonB D KQP88_01380 energy transducer TonB K03832 tonB; periplasmic protein TonB D KQP88_10445 energy transducer TonB K03832 tonB; periplasmic protein TonB D KQP88_23085 energy transducer TonB K03832 tonB; periplasmic protein TonB D KQP88_06450 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D KQP88_06440 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D KQP88_06445 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D KQP88_22960 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D KQP88_22950 malonate decarboxylase subunit delta K13931 mdcC; malonate decarboxylase delta subunit D KQP88_17510 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D KQP88_07365 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D KQP88_11435 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D KQP88_20570 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D KQP88_16650 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D KQP88_10355 MexC family multidrug efflux RND transporter periplasmic adaptor subunit K18295 mexC; membrane fusion protein, multidrug efflux system D KQP88_11105 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D KQP88_05965 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D KQP88_05170 efflux RND transporter periplasmic adaptor subunit K21135 mexM; membrane fusion protein, multidrug efflux system D KQP88_10040 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_12480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_13265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19435 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19735 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_01625 efflux RND transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system D KQP88_09385 efflux RND transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system D KQP88_01630 efflux RND transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system D KQP88_09380 efflux RND transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system D KQP88_11880 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D KQP88_12155 macA; macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D KQP88_12185 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D KQP88_12595 macA; macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D KQP88_14765 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D KQP88_08630 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D KQP88_10855 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D KQP88_15725 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D KQP88_07705 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D KQP88_12720 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:plij02044] D KQP88_20575 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D KQP88_20570 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16645 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D KQP88_16650 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D KQP88_16640 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D KQP88_19935 pilus assembly protein PilZ K02452 gspC; general secretion pathway protein C D KQP88_09335 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D KQP88_19930 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D KQP88_01285 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D KQP88_09285 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D KQP88_19925 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D KQP88_09290 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D KQP88_19920 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D KQP88_09295 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D KQP88_19915 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D KQP88_09300 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D KQP88_19910 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D KQP88_09305 type II secretion system GspH family protein K02458 gspI; general secretion pathway protein I D KQP88_19905 type II secretion system protein K02458 gspI; general secretion pathway protein I D KQP88_09310 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D KQP88_19900 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D KQP88_09315 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D KQP88_19950 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D KQP88_09320 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L D KQP88_19895 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D KQP88_09325 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D KQP88_09330 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N D KQP88_19885 type II secretion system protein N K02463 gspN; general secretion pathway protein N D KQP88_20525 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D KQP88_20510 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D KQP88_20515 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D KQP88_20520 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D KQP88_20670 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D KQP88_05520 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D KQP88_23075 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D KQP88_23070 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D KQP88_23065 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D KQP88_23060 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K02660 pilJ; twitching motility protein PilJ D KQP88_01875 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D KQP88_01880 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D KQP88_01885 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D KQP88_01890 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D KQP88_01895 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D KQP88_23125 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D KQP88_13510 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D KQP88_20690 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D KQP88_20685 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW D KQP88_20680 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D KQP88_20675 pilus assembly protein K02674 pilY1; type IV pilus assembly protein PilY1 D KQP88_16465 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D KQP88_20700 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D KQP88_20695 GspH/FimT family pseudopilin K08085 fimU; type IV fimbrial biogenesis protein FimU D KQP88_16430 peptidoglycan-binding protein K08086 fimV; pilus assembly protein FimV D KQP88_22245 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D KQP88_22290 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D KQP88_22285 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D KQP88_22280 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D KQP88_22275 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D KQP88_22270 type II secretion system F family protein K12510 tadB; tight adherence protein B D KQP88_22265 type II secretion system F family protein K12511 tadC; tight adherence protein C D KQP88_22260 hypothetical protein K27079 tadD; tight adherence protein D D KQP88_22230 hypothetical protein K27080 tadG; tight adherence protein G D KQP88_22295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D KQP88_23140 YggT family protein K02221 yggT; YggT family protein D KQP88_17725 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D KQP88_16580 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D KQP88_09070 sctC; type III secretion system outer membrane ring subunit SctC K03219 yscC; type III secretion protein C D KQP88_09210 type III secretion protein HrpQ K03220 yscD; type III secretion protein D D KQP88_09045 sctJ; type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J D KQP88_09055 sctL; type III secretion system stator protein SctL K03223 yscL; type III secretion protein L D KQP88_09205 FliI/YscN family ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D KQP88_09190 sctQ; type III secretion system cytoplasmic ring protein SctQ K03225 yscQ; type III secretion protein Q D KQP88_09185 sctR; type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R D KQP88_09180 sctS; type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S D KQP88_09175 sctT; type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T D KQP88_09170 sctU; type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U D KQP88_09215 sctV; type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V D KQP88_09220 sctW; type III secretion system gatekeeper subunit SctW K04058 yscW; type III secretion protein W D KQP88_25010 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D KQP88_15830 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D KQP88_25005 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D KQP88_15835 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D KQP88_15760 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D KQP88_24960 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D KQP88_15915 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D KQP88_24950 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D KQP88_15905 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D KQP88_24945 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KQP88_15900 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KQP88_24920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_15860 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_24915 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D KQP88_15855 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D KQP88_24910 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D KQP88_15850 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D KQP88_24905 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D KQP88_15845 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D KQP88_24900 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D KQP88_15840 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D KQP88_05775 dsbC; bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D KQP88_22190 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase D KQP88_11565 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D KQP88_12375 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D KQP88_11560 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK D KQP88_12380 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK D KQP88_11555 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D KQP88_12385 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D KQP88_11530 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D KQP88_12415 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D KQP88_11525 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D KQP88_12420 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D KQP88_11515 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D KQP88_12450 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D KQP88_11510 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D KQP88_12455 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D KQP88_01615 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_04760 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_11500 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D KQP88_01610 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_04755 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_05375 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_11495 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_12360 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_14835 vgrG; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_22315 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D KQP88_11520 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein D KQP88_12445 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein D KQP88_11550 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D KQP88_12390 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D KQP88_11535 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D KQP88_12410 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D KQP88_11505 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ D KQP88_12460 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ D KQP88_11545 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI D KQP88_12395 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI D KQP88_11540 sigma 54-interacting transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D KQP88_12405 sigma 54-interacting transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D KQP88_12370 serine/threonine-protein phosphatase K11915 stp1; serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] D KQP88_12365 serine/threonine protein kinase K11916 stk1; serine/threonine-protein kinase Stk1 [EC:2.7.11.-] D KQP88_05190 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D KQP88_19875 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KQP88_23940 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D KQP88_05440 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D KQP88_21925 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D KQP88_05445 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D KQP88_03815 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D KQP88_21760 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D KQP88_05745 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D KQP88_23215 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D KQP88_05435 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D KQP88_25150 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D KQP88_23360 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D KQP88_23365 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D KQP88_23370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:plij02042] D KQP88_04790 RHS repeat protein K11021 tccC; insecticidal toxin complex protein TccC D KQP88_04795 RHS repeat protein K11021 tccC; insecticidal toxin complex protein TccC D KQP88_19610 hypothetical protein K11021 tccC; insecticidal toxin complex protein TccC D KQP88_19615 hypothetical protein K11021 tccC; insecticidal toxin complex protein TccC D KQP88_19620 toxin K11021 tccC; insecticidal toxin complex protein TccC D KQP88_19625 toxin K11021 tccC; insecticidal toxin complex protein TccC D KQP88_24520 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D KQP88_05735 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D KQP88_22910 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:plij02022] D KQP88_24515 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D KQP88_24510 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D KQP88_18100 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D KQP88_18105 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D KQP88_23780 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D KQP88_23785 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D KQP88_18130 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D KQP88_18135 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D KQP88_17370 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR D KQP88_13270 baeS; sensor histidine kinase efflux regulator BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D KQP88_13275 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D KQP88_05155 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_11420 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_15635 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_05160 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_11425 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_15630 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_06890 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_13405 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D KQP88_06895 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D KQP88_13410 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D KQP88_14395 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D KQP88_14390 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D KQP88_19185 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D KQP88_19190 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D KQP88_12490 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D KQP88_03360 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D KQP88_05075 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D KQP88_08720 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D KQP88_09405 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D KQP88_12485 response regulator K02483 K02483; two-component system, OmpR family, response regulator D KQP88_14420 response regulator K02483 K02483; two-component system, OmpR family, response regulator D KQP88_05800 response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D KQP88_18035 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D KQP88_13450 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D KQP88_05790 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D KQP88_14070 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D KQP88_14065 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA D KQP88_18755 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA D KQP88_22235 PAS domain-containing protein K27076 pprA; two-component system, NarL family, sensor histidine kinase PprA [EC:2.7.13.3] D KQP88_22250 response regulator transcription factor K27077 pprB; two-component system, NarL family, response regulator PprB D KQP88_01010 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D KQP88_01015 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D KQP88_01750 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D KQP88_01745 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D KQP88_20655 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D KQP88_20660 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D KQP88_24270 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D KQP88_19375 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D KQP88_24275 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D KQP88_19380 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D KQP88_00145 PAS domain-containing protein K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D KQP88_00140 algB; sigma-54-dependent response regulator transcription factor AlgB K11384 algB; two-component system, NtrC family, response regulator AlgB D KQP88_15650 hybrid sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D KQP88_15800 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_17475 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_15810 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_17465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_10690 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_15795 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_17500 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_05225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_15170 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_16070 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_23055 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D KQP88_23075 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D KQP88_23070 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D KQP88_05860 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D KQP88_05870 PleD family two-component system response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D KQP88_05865 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D KQP88_15930 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D KQP88_15925 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D KQP88_18865 sensor histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D KQP88_18870 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR D KQP88_03500 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D KQP88_03505 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D KQP88_17605 response regulator K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D KQP88_14475 response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D KQP88_15880 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D KQP88_15885 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D KQP88_07485 PAS domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D KQP88_21145 hybrid sensor histidine kinase/response regulator K20971 ladS; two-component system, sensor histidine kinase LadS D KQP88_22395 response regulator K20972 retS; two-component system, sensor histidine kinase RetS C 02035 Bacterial motility proteins [BR:plij02035] D KQP88_15800 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_17475 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KQP88_15770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_15775 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_17485 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D KQP88_17495 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D KQP88_10685 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_16065 cheR; protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_17490 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D KQP88_10690 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_15795 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_17500 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D KQP88_15810 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_17465 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KQP88_15805 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D KQP88_05225 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_15170 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_16070 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KQP88_23380 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_23385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_24825 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_25060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00555 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00565 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00685 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_00885 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_01340 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_01385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_02205 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_04125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_06745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07635 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08360 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08730 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_08970 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09560 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_09980 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_10145 CHASE3 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_11110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_11415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_12020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_13740 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_15250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_15455 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17480 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_18910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_20545 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_14320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_17460 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D KQP88_07975 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D KQP88_18255 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D KQP88_24950 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D KQP88_15905 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D KQP88_24945 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KQP88_15900 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KQP88_24940 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D KQP88_15895 fliJ; flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ D KQP88_24915 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D KQP88_15855 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D KQP88_24910 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D KQP88_15850 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D KQP88_24905 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D KQP88_15845 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D KQP88_24900 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D KQP88_15840 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D KQP88_25010 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D KQP88_15830 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D KQP88_25005 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D KQP88_15835 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D KQP88_04515 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D KQP88_24955 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D KQP88_15910 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D KQP88_24925 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D KQP88_15865 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D KQP88_24920 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_15860 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D KQP88_24960 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D KQP88_15915 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D KQP88_24880 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D KQP88_15995 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D KQP88_24840 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D KQP88_16075 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D KQP88_24875 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D KQP88_16000 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D KQP88_24930 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D KQP88_01205 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D KQP88_15870 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D KQP88_24965 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D KQP88_15920 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D KQP88_15875 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D KQP88_24845 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D KQP88_16035 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D KQP88_24850 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D KQP88_16030 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D KQP88_24855 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D KQP88_16025 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D KQP88_24865 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D KQP88_16010 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D KQP88_24870 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D KQP88_16005 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D KQP88_24885 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D KQP88_15990 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D KQP88_24860 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D KQP88_16020 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D KQP88_24890 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D KQP88_15985 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D KQP88_24895 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D KQP88_15980 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D KQP88_24830 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D KQP88_16085 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D KQP88_18770 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D KQP88_13285 fliB; flagellin lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D KQP88_25040 FliC/FljB family flagellin K02406 fliC; flagellin D KQP88_15960 flagellin FliC K02406 fliC; flagellin D KQP88_24970 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D KQP88_15950 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D KQP88_24975 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D KQP88_15945 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D KQP88_15940 flagellar protein FliT K02423 fliT; flagellar protein FliT D KQP88_24985 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D KQP88_24990 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D KQP88_25025 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_15815 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D KQP88_24995 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_25045 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D KQP88_02690 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D KQP88_15790 flagellar motor protein K02556 motA; chemotaxis protein MotA D KQP88_25000 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_25050 OmpA family protein K02557 motB; chemotaxis protein MotB D KQP88_02695 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D KQP88_15785 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D KQP88_15935 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D KQP88_15930 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D KQP88_15925 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D KQP88_01695 tcyJ; cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KQP88_16080 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D KQP88_15955 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D KQP88_25015 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D KQP88_15825 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D KQP88_15820 fleN; flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG D KQP88_23075 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D KQP88_23070 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D KQP88_23065 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D KQP88_23060 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K02660 pilJ; twitching motility protein PilJ D KQP88_23055 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D KQP88_20660 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D KQP88_20655 PAS domain-containing protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D KQP88_23125 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D KQP88_13510 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D KQP88_23050 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D KQP88_20510 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D KQP88_20515 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D KQP88_20520 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D KQP88_20525 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D KQP88_05520 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D KQP88_01895 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D KQP88_01890 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D KQP88_01885 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D KQP88_01880 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D KQP88_01875 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D KQP88_16465 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D KQP88_20690 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D KQP88_20685 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW D KQP88_20680 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D KQP88_20675 pilus assembly protein K02674 pilY1; type IV pilus assembly protein PilY1 D KQP88_20670 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D KQP88_22295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D KQP88_22245 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D KQP88_22290 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D KQP88_22285 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D KQP88_22280 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D KQP88_22275 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D KQP88_05190 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:plij04812] D KQP88_20335 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D KQP88_19970 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D KQP88_19975 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D KQP88_16915 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D KQP88_16920 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D KQP88_16925 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D KQP88_25130 ParA family protein K03496 parA; chromosome partitioning protein D KQP88_02050 ParA family protein K03496 parA; chromosome partitioning protein D KQP88_15780 ParA family protein K03496 parA; chromosome partitioning protein D KQP88_25125 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:plij04147] D KQP88_14500 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D KQP88_06175 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KQP88_05060 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KQP88_15070 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KQP88_02385 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D KQP88_19560 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D KQP88_18440 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D KQP88_02420 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D KQP88_19780 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KQP88_03750 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D KQP88_03900 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KQP88_07115 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_12465 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D KQP88_05600 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D KQP88_21870 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D KQP88_22035 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D KQP88_03130 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D KQP88_18470 fadD1; long-chain-fatty-acid--CoA ligase FadD1 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D KQP88_03885 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_11780 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22195 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KQP88_22865 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D KQP88_05925 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D KQP88_07845 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D KQP88_01005 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D KQP88_18765 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D KQP88_15280 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D KQP88_23420 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KQP88_11935 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D KQP88_18830 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D KQP88_23680 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_23690 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01775 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_11155 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_16100 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KQP88_01110 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D KQP88_15295 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D KQP88_06540 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D KQP88_23610 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_07135 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KQP88_22385 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D KQP88_14530 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D KQP88_14605 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D KQP88_05125 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KQP88_10965 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KQP88_03810 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D KQP88_23435 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:plij02048] D KQP88_05310 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 D KQP88_05305 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D KQP88_05300 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D KQP88_05295 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D KQP88_05290 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D KQP88_05285 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D KQP88_03650 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D KQP88_03665 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D KQP88_18210 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KQP88_18225 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D KQP88_18220 McrC family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D KQP88_24090 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D KQP88_24095 type II toxin-antitoxin system Phd/YefM family antitoxin K18923 stbD; antitoxin StbD D KQP88_23480 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D KQP88_21415 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D KQP88_07890 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-] D KQP88_19970 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D KQP88_20335 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D KQP88_02655 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D KQP88_02640 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D KQP88_14740 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KQP88_19165 hypothetical protein K19168 cptA; toxin CptA D KQP88_19170 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D KQP88_05475 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KQP88_08660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:plij01504] D KQP88_12470 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D KQP88_05155 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_11420 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_15635 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D KQP88_05160 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_11425 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_15630 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D KQP88_09545 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D KQP88_11265 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D KQP88_06370 OprD family porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D KQP88_06340 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D KQP88_18100 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D KQP88_18105 response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D KQP88_10040 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_12480 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_13265 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19435 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_19735 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D KQP88_10045 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_12475 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19440 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_19740 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_10270 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D KQP88_12175 adeC; AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_13255 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_19445 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D KQP88_10360 transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D KQP88_10355 MexC family multidrug efflux RND transporter periplasmic adaptor subunit K18295 mexC; membrane fusion protein, multidrug efflux system D KQP88_10350 multidrug efflux RND transporter permease subunit K18296 mexD; multidrug efflux pump D KQP88_11105 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D KQP88_11100 efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump D KQP88_11095 TolC family protein K18300 oprN; outer membrane protein, multidrug efflux system D KQP88_05960 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D KQP88_05965 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D KQP88_05970 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D KQP88_03145 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D KQP88_02605 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_16045 TolC family protein K12340 tolC; outer membrane protein D KQP88_20580 TolC family outer membrane protein K12340 tolC; outer membrane protein D KQP88_14065 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA D KQP88_18755 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA D KQP88_10100 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:plij00536] D KQP88_08265 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin D KQP88_11290 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:plij00537] D KQP88_02420 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:plij03100] D KQP88_14725 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_06765 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_03305 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_04065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_08690 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_14735 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_21975 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_24400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KQP88_06655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_06695 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_01430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_06660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_07440 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KQP88_09880 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D KQP88_20625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D KQP88_16365 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KQP88_16370 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KQP88_17095 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KQP88_13230 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D KQP88_04235 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D KQP88_17575 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_14730 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_17585 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_14720 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KQP88_19290 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_21940 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_13435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_17570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_17580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KQP88_07445 tRNA-His K14226 tRNA-His; tRNA His D KQP88_03300 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_04060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_06760 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_08685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_21980 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_24405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KQP88_03820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_05420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_02780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_13200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_07450 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_02785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KQP88_20615 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D KQP88_06470 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D KQP88_04170 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_02965 tRNA-Ile K14230 tRNA-Met; tRNA Met D KQP88_03825 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_06350 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_06345 tRNA-Met K14230 tRNA-Met; tRNA Met D KQP88_24055 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D KQP88_20610 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KQP88_13780 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KQP88_20620 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KQP88_08310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_06650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_17270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_08945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KQP88_24175 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KQP88_21935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KQP88_21930 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D KQP88_21945 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D KQP88_16375 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_17100 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_10585 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_10595 tRNA-Val K14237 tRNA-Val; tRNA Val D KQP88_24410 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_03295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_04055 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_06755 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_08680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_21985 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KQP88_04070 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_06770 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_03310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_08695 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_21970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_24395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KQP88_03315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24385 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_04075 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_06775 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_08700 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_21965 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_24390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KQP88_07770 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D KQP88_20045 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D KQP88_03675 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D KQP88_12270 L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D KQP88_10070 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D KQP88_16190 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D KQP88_22835 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D KQP88_01735 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D KQP88_18315 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D KQP88_10075 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D KQP88_01850 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D KQP88_10505 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D KQP88_16330 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D KQP88_22675 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D KQP88_13305 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D KQP88_13310 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D KQP88_14615 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D KQP88_04340 NAD(P)/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D KQP88_00105 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D KQP88_01200 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D KQP88_03375 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D KQP88_10885 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D KQP88_13060 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D KQP88_18420 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D KQP88_11070 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D KQP88_02475 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D KQP88_17615 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D KQP88_18660 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D KQP88_21520 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D KQP88_08910 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D KQP88_04045 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D KQP88_08250 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6] D KQP88_09570 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D KQP88_17300 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D KQP88_11875 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D KQP88_23720 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D KQP88_11065 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D KQP88_00360 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D KQP88_17665 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D KQP88_16900 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D KQP88_17565 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D KQP88_17440 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D KQP88_19530 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D KQP88_13130 SidA/IucD/PvdA family monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D KQP88_01665 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D KQP88_12675 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D KQP88_11180 LLM class flavin-dependent oxidoreductase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D KQP88_01725 LLM class flavin-dependent oxidoreductase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-] D KQP88_06295 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D KQP88_20885 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D KQP88_18060 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D KQP88_22685 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D KQP88_18165 SDR family NAD(P)-dependent oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D KQP88_06220 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D KQP88_24765 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D KQP88_04295 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D KQP88_02540 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D KQP88_22930 mdcH; malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D KQP88_18460 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D KQP88_21205 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D KQP88_19650 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D KQP88_06315 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D KQP88_22520 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D KQP88_08875 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D KQP88_14365 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D KQP88_08870 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D KQP88_22955 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D KQP88_06275 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D KQP88_17865 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D KQP88_23555 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D KQP88_15050 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D KQP88_22840 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D KQP88_16185 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D KQP88_14155 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D KQP88_16765 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D KQP88_02495 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D KQP88_22935 malonate decarboxylase holo-ACP synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D KQP88_02070 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D KQP88_17130 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D KQP88_21690 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D KQP88_23285 phaZ; poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76] D KQP88_12275 thioesterase family protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33] D KQP88_02000 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D KQP88_14710 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D KQP88_17350 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D KQP88_14460 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D KQP88_00150 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D KQP88_11410 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D KQP88_00440 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D KQP88_13885 endonuclease I family protein K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D KQP88_14340 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D KQP88_16460 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D KQP88_20400 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D KQP88_24625 DUF1921 domain-containing protein K22253 mta; glucan 1,4-alpha-maltotetraohydrolase [EC:3.2.1.60] D KQP88_00085 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D KQP88_18350 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D KQP88_18665 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D KQP88_20305 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D KQP88_10510 alpha/beta hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D KQP88_03225 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D KQP88_16525 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D KQP88_07235 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D KQP88_09700 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D KQP88_14375 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D KQP88_19540 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D KQP88_01515 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D KQP88_19775 uvsE; UV DNA damage repair endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D KQP88_22945 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D KQP88_22940 mdcE; biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D KQP88_22845 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D KQP88_18150 mandelate racemase/muconate lactonizing enzyme family protein K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81] D KQP88_02720 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D KQP88_06015 cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D KQP88_01050 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D KQP88_11470 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D KQP88_09495 AGE family epimerase/isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D KQP88_22855 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D KQP88_21355 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D KQP88_18730 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D KQP88_18725 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D KQP88_07875 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D KQP88_23540 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D KQP88_03960 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D KQP88_03700 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D KQP88_03695 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D KQP88_03690 lactate utilization protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D KQP88_24310 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D KQP88_05500 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D KQP88_06235 ferredoxin family protein K05524 fdxA; ferredoxin D KQP88_18735 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D KQP88_18740 NADH:quinone oxidoreductase K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D KQP88_18720 NADH:quinone oxidoreductase K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D KQP88_04565 flavodoxin K06205 mioC; MioC protein D KQP88_05480 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D KQP88_14610 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D KQP88_00375 dodecin family protein K09165 K09165; dodecin C 99983 Lipid metabolism D KQP88_21140 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase D KQP88_01810 haloacid dehalogenase-like hydrolase K21830 pchP; phosphorylcholine phosphatase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D KQP88_04530 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein D KQP88_23130 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D KQP88_04840 algK; alginate biosynthesis TPR repeat lipoprotein AlgK K19292 algK; alginate biosynthesis protein AlgK D KQP88_08355 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D KQP88_01035 heme biosynthesis protein HemY K02498 hemY; HemY protein D KQP88_23345 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D KQP88_23340 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D KQP88_00915 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D KQP88_10835 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein C 99988 Secondary metabolism D KQP88_07595 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D KQP88_14330 DoxX family protein K15977 K15977; putative oxidoreductase D KQP88_04895 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase D KQP88_09340 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D KQP88_05005 cold-shock protein K03704 cspA; cold shock protein D KQP88_06385 cold-shock protein K03704 cspA; cold shock protein D KQP88_08850 cspD; cold shock domain-containing protein CspD K03704 cspA; cold shock protein D KQP88_13830 cold-shock protein K03704 cspA; cold shock protein D KQP88_18705 cold-shock protein K03704 cspA; cold shock protein D KQP88_01045 rsd; sigma D regulator K07740 rsd; regulator of sigma D D KQP88_00920 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D KQP88_23790 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D KQP88_17740 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D KQP88_18050 META domain-containing protein K03668 hslJ; heat shock protein HslJ D KQP88_08855 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D KQP88_07455 tig; trigger factor K03545 tig; trigger factor D KQP88_04050 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D KQP88_22640 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D KQP88_22645 urease accessory protein UreF K03188 ureF; urease accessory protein D KQP88_22650 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D KQP88_22510 urease accessory protein UreD K03190 ureD; urease accessory protein D KQP88_22655 HupE/UreJ family protein K03192 ureJ; urease accessory protein D KQP88_03715 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D KQP88_00895 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D KQP88_23620 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D KQP88_17830 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D KQP88_22050 OsmC family protein K07397 yhfA; putative redox protein D KQP88_10795 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D KQP88_17405 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D KQP88_06515 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor D KQP88_07725 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D KQP88_19810 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D KQP88_00740 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D KQP88_17875 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D KQP88_05610 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D KQP88_20060 YraN family protein K07460 yraN; putative endonuclease D KQP88_04930 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D KQP88_00095 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D KQP88_08890 replication-associated recombination protein A K07478 ycaJ; putative ATPase D KQP88_00745 transposase K07486 K07486; transposase D KQP88_01300 transposase K07486 K07486; transposase D KQP88_02200 transposase K07486 K07486; transposase D KQP88_06955 transposase K07486 K07486; transposase D KQP88_18500 transposase K07486 K07486; transposase D KQP88_22485 transposase K07486 K07486; transposase C 99979 Viral proteins C 99998 Others D KQP88_07835 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D KQP88_09410 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein D KQP88_13260 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D KQP88_00475 CitMHS family transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D KQP88_09735 citrate:proton symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D KQP88_07160 MFS transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family D KQP88_16195 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D KQP88_24615 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D KQP88_14515 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D KQP88_17110 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D KQP88_16790 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D KQP88_17355 septation protein A K06190 ispZ; intracellular septation protein D KQP88_18265 polyribonucleotide nucleotidyltransferase K27311 dcrB; inner membrane lipoprotein DcrB D KQP88_03015 SpoVR family protein K06415 spoVR; stage V sporulation protein R D KQP88_23960 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator C 99993 Cell motility D KQP88_01085 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D KQP88_20405 ampE; regulatory signaling modulator protein AmpE K03807 ampE; AmpE protein D KQP88_20455 TerD family protein K05792 terA; tellurite resistance protein TerA D KQP88_20435 TerD family protein K05795 terD; tellurium resistance protein TerD D KQP88_20440 TerD family protein K05795 terD; tellurium resistance protein TerD D KQP88_20460 tellurium resistance TerZ family protein K05791 terZ; tellurium resistance protein TerZ D KQP88_15150 universal stress protein K06149 uspA; universal stress protein A D KQP88_07350 universal stress protein K14055 uspE; universal stress protein E D KQP88_01785 typA; translational GTPase TypA K06207 typA; GTP-binding protein D KQP88_00650 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator D KQP88_13735 HPP family protein K07168 K07168; CBS domain-containing membrane protein D KQP88_21190 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D KQP88_04870 PhoH family protein K07175 phoH2; PhoH-like ATPase D KQP88_03025 PrkA family serine protein kinase K07180 prkA; serine protein kinase D KQP88_22825 CBS domain-containing protein K07182 K07182; CBS domain-containing protein D KQP88_16150 SH3 domain-containing protein K07184 ygiM; SH3 domain protein D KQP88_10710 AAA family ATPase K08482 kaiC; circadian clock protein KaiC D KQP88_19840 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D KQP88_08885 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D KQP88_04245 lolB; lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB D KQP88_15000 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D KQP88_16880 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D KQP88_18565 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D KQP88_06120 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D KQP88_06225 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D KQP88_21655 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D KQP88_04405 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein D KQP88_24040 AsmA family protein K07289 asmA; AsmA protein D KQP88_22630 AsmA family protein K07290 yhjG; AsmA family protein D KQP88_22585 osmE; osmotically-inducible lipoprotein OsmE K04064 osmE; osmotically inducible lipoprotein OsmE D KQP88_15730 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D KQP88_15710 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D KQP88_15715 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D KQP88_05525 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D KQP88_24540 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D KQP88_18785 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D KQP88_23395 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D KQP88_20450 tellurite resistance TerB family protein K05793 terB; tellurite resistance protein TerB D KQP88_20445 TerC/Alx family metal homeostasis membrane protein K05794 terC; tellurite resistance protein TerC D KQP88_03040 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D KQP88_00970 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D KQP88_19715 peptidase K07231 K07231; putative iron-regulated protein D KQP88_17205 copper resistance protein B K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D KQP88_18875 GlpM family protein K02442 glpM; membrane protein GlpM D KQP88_16400 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D KQP88_22085 glycoside hydrolase family 19 protein K03791 K03791; putative chitinase D KQP88_11735 MCE family protein K06192 pqiB; paraquat-inducible protein B D KQP88_02125 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D KQP88_03865 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein D KQP88_22665 pqqA; pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D KQP88_22670 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D KQP88_22680 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D KQP88_19035 group 1 truncated hemoglobin K06886 glbN; hemoglobin D KQP88_14385 patatin-like phospholipase family protein K07001 K07001; NTE family protein D KQP88_16905 patatin-like phospholipase family protein K07001 K07001; NTE family protein D KQP88_22010 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D KQP88_18355 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D KQP88_19790 fxsA; membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA D KQP88_06010 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D KQP88_17835 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D KQP88_08825 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D KQP88_15325 heme-binding protein K11477 glcG; glc operon protein GlcG D KQP88_18125 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF D KQP88_12505 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF D KQP88_06380 SlyX family protein K03745 slyX; SlyX protein D KQP88_20740 CreA family protein K05805 creA; CreA protein D KQP88_18090 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein D KQP88_16405 SPOR domain-containing protein K03749 dedD; DedD protein D KQP88_01910 SPOR domain-containing protein K03112 damX; DamX protein D KQP88_21380 DedA family protein K03975 dedA; membrane-associated protein D KQP88_11740 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D KQP88_11745 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D KQP88_18545 hypothetical protein K08985 K08985; putative lipoprotein D KQP88_19360 hypothetical protein K08988 K08988; putative membrane protein D KQP88_16255 DUF350 domain-containing protein K08989 K08989; putative membrane protein D KQP88_18600 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein D KQP88_06475 DUF4142 domain-containing protein K08995 K08995; putative membrane protein D KQP88_18640 YchJ family protein K09858 K09858; SEC-C motif domain protein D KQP88_04135 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D KQP88_08165 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D KQP88_15450 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D KQP88_19365 TPM domain-containing protein K06872 K06872; uncharacterized protein D KQP88_03580 general stress protein K06884 K06884; uncharacterized protein D KQP88_18235 Hcp family type VI secretion system effector K06887 K06887; uncharacterized protein D KQP88_03545 alpha/beta hydrolase K06889 K06889; uncharacterized protein D KQP88_05900 alpha/beta hydrolase K06889 K06889; uncharacterized protein D KQP88_08125 lysophospholipase K06889 K06889; uncharacterized protein D KQP88_13550 alpha/beta hydrolase K06889 K06889; uncharacterized protein D KQP88_15390 alpha/beta hydrolase K06889 K06889; uncharacterized protein D KQP88_17600 ATP-binding protein K06923 K06923; uncharacterized protein D KQP88_00975 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D KQP88_05715 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D KQP88_07345 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D KQP88_00805 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D KQP88_01790 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D KQP88_14575 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D KQP88_04285 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D KQP88_04130 HD domain-containing protein K06950 K06950; uncharacterized protein D KQP88_20650 hypothetical protein K06950 K06950; uncharacterized protein D KQP88_04305 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D KQP88_14280 N-acetyltransferase K06975 K06975; uncharacterized protein D KQP88_06575 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D KQP88_18685 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D KQP88_10165 VOC family protein K06991 K06991; uncharacterized protein D KQP88_00770 cupin domain-containing protein K06995 K06995; uncharacterized protein D KQP88_02635 alpha/beta fold hydrolase K07000 K07000; uncharacterized protein D KQP88_16235 RND family transporter K07003 K07003; uncharacterized protein D KQP88_06990 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D KQP88_20125 alpha/beta hydrolase K07018 K07018; uncharacterized protein D KQP88_01865 hydrolase K07019 K07019; uncharacterized protein D KQP88_07940 esterase K07020 K07020; uncharacterized protein D KQP88_04000 AAA family ATPase K07028 K07028; uncharacterized protein D KQP88_16625 YecA family protein K07039 K07039; uncharacterized protein D KQP88_12995 TatD family hydrolase K07051 K07051; uncharacterized protein D KQP88_20930 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D KQP88_00325 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein D KQP88_04345 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D KQP88_00845 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D KQP88_03370 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D KQP88_03570 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D KQP88_05360 TSUP family transporter K07090 K07090; uncharacterized protein D KQP88_05590 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D KQP88_10725 TSUP family transporter K07090 K07090; uncharacterized protein D KQP88_17655 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D KQP88_19945 PhoX family phosphatase K07093 K07093; uncharacterized protein D KQP88_22755 PhoX family phosphatase K07093 K07093; uncharacterized protein D KQP88_10035 metallophosphoesterase K07098 K07098; uncharacterized protein D KQP88_21050 metallophosphoesterase K07098 K07098; uncharacterized protein D KQP88_24635 YeeE/YedE family protein K07112 K07112; uncharacterized protein D KQP88_09500 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D KQP88_19210 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D KQP88_20055 penicillin-binding protein activator K07121 K07121; uncharacterized protein D KQP88_15425 SDR family oxidoreductase K07124 K07124; uncharacterized protein D KQP88_22030 SDR family oxidoreductase K07124 K07124; uncharacterized protein D KQP88_21175 sel1 repeat family protein K07126 K07126; uncharacterized protein D KQP88_18550 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D KQP88_15165 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D KQP88_21315 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D KQP88_25155 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D KQP88_21255 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D KQP88_17220 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D KQP88_04300 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D KQP88_13595 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein D KQP88_17360 YciI family protein K09780 K09780; uncharacterized protein D KQP88_07660 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D KQP88_03020 YeaH/YhbH family protein K09786 K09786; uncharacterized protein D KQP88_05035 YbaN family protein K09790 K09790; uncharacterized protein D KQP88_16630 YbaN family protein K09790 K09790; uncharacterized protein D KQP88_16560 Trm112 family protein K09791 K09791; uncharacterized protein D KQP88_07865 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D KQP88_23970 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D KQP88_03725 RnfH family protein K09801 K09801; uncharacterized protein D KQP88_18375 GntR family transcriptional regulator K00243 K00243; uncharacterized protein D KQP88_02660 membrane integrity-associated transporter subunit PqiC K09857 K09857; uncharacterized protein D KQP88_11730 PqiC family protein K09857 K09857; uncharacterized protein D KQP88_01095 hypothetical protein K09859 K09859; uncharacterized protein D KQP88_04860 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D KQP88_20535 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D KQP88_01240 YecA family protein K09895 K09895; uncharacterized protein D KQP88_16830 YheU family protein K09898 K09898; uncharacterized protein D KQP88_17235 YcgL domain-containing protein K09902 K09902; uncharacterized protein D KQP88_20130 DUF1043 family protein K09908 K09908; uncharacterized protein D KQP88_18010 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D KQP88_10550 DUF480 domain-containing protein K09915 K09915; uncharacterized protein D KQP88_16290 DUF1315 family protein K09916 K09916; uncharacterized protein D KQP88_04600 YebG family protein K09918 K09918; uncharacterized protein D KQP88_18450 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D KQP88_02625 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein D KQP88_00950 DUF484 family protein K09921 K09921; uncharacterized protein D KQP88_14075 YggL family protein K09923 K09923; uncharacterized protein D KQP88_17845 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein D KQP88_07880 FixH family protein K09926 K09926; uncharacterized protein D KQP88_17650 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein D KQP88_04555 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D KQP88_11270 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D KQP88_12875 DUF1175 family protein K09934 K09934; uncharacterized protein D KQP88_17985 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D KQP88_00550 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein D KQP88_20990 DUF2076 domain-containing protein K09945 K09945; uncharacterized protein D KQP88_19730 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein D KQP88_04545 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D KQP88_24580 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein D KQP88_21650 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein D KQP88_05140 DUF3820 family protein K09954 K09954; uncharacterized protein D KQP88_15495 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein D KQP88_12030 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein D KQP88_19245 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D KQP88_19250 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D KQP88_23450 HutD family protein K09975 K09975; uncharacterized protein D KQP88_16310 DUF1853 family protein K09977 K09977; uncharacterized protein D KQP88_16275 YjfI family protein K09980 K09980; uncharacterized protein D KQP88_10555 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D KQP88_16440 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D KQP88_17160 VWA domain-containing protein K09989 K09989; uncharacterized protein D KQP88_19725 imelysin K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 5, 2024