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Transcription Machinery - Perognathus longimembris pacificus (Pacific pocket mouse)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E 125365391 Polr2a; DNA-directed RNA polymerase II subunit RPB1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E 125364969 Polr2b; DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E 125358403 Polr2c; DNA-directed RNA polymerase II subunit RPB3 isoform X1 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 125368035 Polr2j; DNA-directed RNA polymerase II subunit RPB11-a K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E 125350794 Polr2d; DNA-directed RNA polymerase II subunit RPB4 isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
E 125362114 Polr2g; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 125367957 Polr2i; DNA-directed RNA polymerase II subunit RPB9 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
E 125340343 Polr2m; protein GRINL1A K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A
E 125365291 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit GRINL1A-like K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A
D Pol I, II, III common subunits
E 125348519 Polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 125358468 Polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 125343431 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 125352067 Polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 125367176 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125360755 Polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125350023 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125353133 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125361497 Polr2l; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E 125362949 Gtf2a1; transcription initiation factor IIA subunit 1 isoform X1 K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 125356461 Gtf2a1l; TFIIA-alpha and beta-like factor isoform X1 K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 125347078 transcription initiation factor IIA subunit 2-like K03123 TFIIA2; transcription initiation factor TFIIA small subunit
E 125340915 Gtf2a2; transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
E 125364197 transcription initiation factor IIA subunit 2-like K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E 125355373 Gtf2b; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E 125363066 Tbpl2; TATA box-binding protein-like 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125357302 Tbpl1; TATA box-binding protein-like 1 isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125357508 TATA-box-binding protein isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125343396 Taf1; transcription initiation factor TFIID subunit 1 isoform X1 K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E 125360552 Taf2; transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 125364539 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like K03128 TAF2; transcription initiation factor TFIID subunit 2
E 125364544 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like K03128 TAF2; transcription initiation factor TFIID subunit 2
E 125367265 Taf3; transcription initiation factor TFIID subunit 3 isoform X1 K14650 TAF3; transcription initiation factor TFIID subunit 3
E 125353935 Taf4; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 125364089 Taf4b; transcription initiation factor TFIID subunit 4B K03129 TAF4; transcription initiation factor TFIID subunit 4
E 125367237 Taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 125346094 Taf5; transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 125367089 Taf6; transcription initiation factor TFIID subunit 6 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 125362105 Taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L K03131 TAF6; transcription initiation factor TFIID subunit 6
E 125340004 Taf7; transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 125356156 transcription initiation factor TFIID subunit 7-like K03132 TAF7; transcription initiation factor TFIID subunit 7
E 125343721 Taf7l; transcription initiation factor TFIID subunit 7-like K03132 TAF7; transcription initiation factor TFIID subunit 7
E 125352589 Taf8; transcription initiation factor TFIID subunit 8 isoform X1 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 125367830 Taf9; transcription initiation factor TFIID subunit 9 K14535 TAF9; transcription initiation factor TFIID subunit 9
E 125343430 Taf9b; transcription initiation factor TFIID subunit 9B isoform X1 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 125361365 Taf10; transcription initiation factor TFIID subunit 10 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 125352674 Taf11; transcription initiation factor TFIID subunit 11 K03135 TAF11; transcription initiation factor TFIID subunit 11
E 125354813 Taf12; transcription initiation factor TFIID subunit 12 isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 125341433 transcription initiation factor TFIID subunit 13 K03127 TAF13; transcription initiation factor TFIID subunit 13
E 125341616 transcription initiation factor TFIID subunit 13 K03127 TAF13; transcription initiation factor TFIID subunit 13
E 125364236 Taf13; transcription initiation factor TFIID subunit 13 K03127 TAF13; transcription initiation factor TFIID subunit 13
E 125350796 transcription initiation factor TFIID subunit 13-like K03127 TAF13; transcription initiation factor TFIID subunit 13
E 125365296 Taf15; TATA-binding protein-associated factor 2N K14651 TAF15; transcription initiation factor TFIID subunit 15
D TFIIE
E 125351743 Gtf2e1; general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 125339408 Gtf2e2; transcription initiation factor IIE subunit beta K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E 125348563 Gtf2f1; general transcription factor IIF subunit 1 isoform X1 K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha
E 125348256 Gtf2f2; general transcription factor IIF subunit 2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E 125362671 Gtf2h1; general transcription factor IIH subunit 1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 125367458 Gtf2h2; general transcription factor IIH subunit 2 isoform X1 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 125349204 Gtf2h3; general transcription factor IIH subunit 3 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 125350815 Ercc3; general transcription and DNA repair factor IIH helicase subunit XPB K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 125368389 Ercc2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 125357449 Gtf2h5; general transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 125367829 Cdk7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 125363089 Mnat1; CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 125340111 Ccnh; cyclin-H K06634 CCNH; cyclin H
C Mediator complex
D Head
E 125363268 Med6; mediator of RNA polymerase II transcription subunit 6 isoform X1 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 125355033 Med8; mediator of RNA polymerase II transcription subunit 8 isoform X1 K15129 MED8; mediator of RNA polymerase II transcription subunit 8
E 125365306 Med11; mediator of RNA polymerase II transcription subunit 11 K15131 MED11; mediator of RNA polymerase II transcription subunit 11
E 125350774 Med17; mediator of RNA polymerase II transcription subunit 17 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 125354807 Med18; mediator of RNA polymerase II transcription subunit 18 K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 125361487 Med19; mediator of RNA polymerase II transcription subunit 19 K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 125355668 mediator of RNA polymerase II transcription subunit 19-like K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 125342220 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 19-like K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 125352595 Med20; mediator of RNA polymerase II transcription subunit 20 isoform X1 K13528 MED20; mediator of RNA polymerase II transcription subunit 20
E 125350872 Med22; mediator of RNA polymerase II transcription subunit 22 K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E 125364837 Med28; mediator of RNA polymerase II transcription subunit 28 K15141 MED28; mediator of RNA polymerase II transcription subunit 28
E 125367915 Med29; mediator of RNA polymerase II transcription subunit 29 K15142 MED29; mediator of RNA polymerase II transcription subunit 29
E 125360864 Med30; mediator of RNA polymerase II transcription subunit 30 K15143 MED30; mediator of RNA polymerase II transcription subunit 30
D Middle
E 125366208 Med1; mediator of RNA polymerase II transcription subunit 1 isoform X1 K15144 MED1; mediator of RNA polymerase II transcription subunit 1
E 125348273 Med4; mediator of RNA polymerase II transcription subunit 4 K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E 125342124 Med7; mediator of RNA polymerase II transcription subunit 7 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 125350041 mediator of RNA polymerase II transcription subunit 7-like K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 125365950 Med9; mediator of RNA polymerase II transcription subunit 9 K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E 125367672 Med10; mediator of RNA polymerase II transcription subunit 10 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E 125364011 mediator of RNA polymerase II transcription subunit 21-like K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 125366553 mediator of RNA polymerase II transcription subunit 21-like isoform X1 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 125366568 mediator of RNA polymerase II transcription subunit 21 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 125366442 Med31; mediator of RNA polymerase II transcription subunit 31 K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E 125343295 Med14; mediator of RNA polymerase II transcription subunit 14 isoform X1 K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E 125349352 Med15; mediator of RNA polymerase II transcription subunit 15 isoform X1 K15157 MED15; mediator of RNA polymerase II transcription subunit 15
E 125348527 Med16; mediator of RNA polymerase II transcription subunit 16 isoform X1 K15159 MED16; mediator of RNA polymerase II transcription subunit 16
D CDK-module
E 125348405 Cdk8; cyclin-dependent kinase 8 isoform X1 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 125357178 Cdk19; cyclin-dependent kinase 19 isoform X1 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 125357105 Ccnc; cyclin-C isoform X1 K15161 CCNC; cyclin-C
E 125342548 Med12l; mediator of RNA polymerase II transcription subunit 12-like protein isoform X1 K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 125343240 Med12; mediator of RNA polymerase II transcription subunit 12 isoform X1 K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 125349082 Med13l; mediator of RNA polymerase II transcription subunit 13-like isoform X1 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
E 125366007 Med13; mediator of RNA polymerase II transcription subunit 13 isoform X1 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E 125357288 Med23; mediator of RNA polymerase II transcription subunit 23 isoform X1 K15166 MED23; mediator of RNA polymerase II transcription subunit 23
E 125366169 Med24; mediator of RNA polymerase II transcription subunit 24 isoform X1 K15167 MED24; mediator of RNA polymerase II transcription subunit 24
E 125338589 Med25; mediator of RNA polymerase II transcription subunit 25 isoform X1 K15168 MED25; mediator of RNA polymerase II transcription subunit 25
E 125348976 Med26; mediator of RNA polymerase II transcription subunit 26 K15169 MED26; mediator of RNA polymerase II transcription subunit 26
E 125350610 Med27; mediator of RNA polymerase II transcription subunit 27 isoform X1 K15170 MED27; mediator of RNA polymerase II transcription subunit 27
C Coactivators
D SAGA/TFTC/STAGA complex
E 125358646 Kat2b; histone acetyltransferase KAT2B K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 125365898 Kat2a; histone acetyltransferase KAT2A isoform X1 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 125366930 transformation/transcription domain-associated protein isoform X1 K08874 TRRAP; transformation/transcription domain-associated protein
E 125352524 Supt3h; transcription initiation protein SPT3 homolog isoform X1 K11313 SUPT3H; transcription initiation protein SPT3
E 125365556 Tada2a; transcriptional adapter 2-alpha isoform X1 K11314 TADA2A; transcriptional adapter 2-alpha
E 125364824 Tada2b; transcriptional adapter 2-beta K15127 TADA2B; transcriptional adapter 2-beta
E 125358788 Tada3; transcriptional adapter 3 K11315 TADA3; transcriptional adapter 3
E 125359166 Tada1; transcriptional adapter 1 K11317 TADA1; transcriptional adapter 1
E 125360552 Taf2; transcription initiation factor TFIID subunit 2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 125364539 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like K03128 TAF2; transcription initiation factor TFIID subunit 2
E 125364544 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like K03128 TAF2; transcription initiation factor TFIID subunit 2
E 125353935 Taf4; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 125364089 Taf4b; transcription initiation factor TFIID subunit 4B K03129 TAF4; transcription initiation factor TFIID subunit 4
E 125367237 Taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 125346094 Taf5; transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 125367089 Taf6; transcription initiation factor TFIID subunit 6 K03131 TAF6; transcription initiation factor TFIID subunit 6
E 125362105 Taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L K03131 TAF6; transcription initiation factor TFIID subunit 6
E 125340004 Taf7; transcription initiation factor TFIID subunit 7 K03132 TAF7; transcription initiation factor TFIID subunit 7
E 125356156 transcription initiation factor TFIID subunit 7-like K03132 TAF7; transcription initiation factor TFIID subunit 7
E 125343721 Taf7l; transcription initiation factor TFIID subunit 7-like K03132 TAF7; transcription initiation factor TFIID subunit 7
E 125367830 Taf9; transcription initiation factor TFIID subunit 9 K14535 TAF9; transcription initiation factor TFIID subunit 9
E 125343430 Taf9b; transcription initiation factor TFIID subunit 9B isoform X1 K03133 TAF9B; transcription initiation factor TFIID subunit 9B
E 125361365 Taf10; transcription initiation factor TFIID subunit 10 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 125354813 Taf12; transcription initiation factor TFIID subunit 12 isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 125365382 Atxn7l3; ataxin-7-like protein 3 isoform X1 K11363 SGF11; SAGA-associated factor 11
E 125340728 Sgf29; SAGA-associated factor 29 K11364 SGF29; SAGA-associated factor 29
E 125356617 Supt7l; STAGA complex 65 subunit gamma K11316 SUPT7L; STAGA complex 65 subunit gamma
E 125346897 Atxn7l1; ataxin-7-like protein 1 isoform X1 K11318 ATXN7; ataxin-7
E 125364262 Atxn7l2; ataxin-7-like protein 2 isoform X1 K11318 ATXN7; ataxin-7
E 125358706 Atxn7; ataxin-7 isoform X1 K11318 ATXN7; ataxin-7
E 125340127 Chd1; chromodomain-helicase-DNA-binding protein 1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 125361055 Eny2; transcription and mRNA export factor ENY2 isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 125343120 Usp27x; ubiquitin carboxyl-terminal hydrolase 27 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 125344003 Usp51; ubiquitin carboxyl-terminal hydrolase 51 isoform X1 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 125365280 Usp22; ubiquitin carboxyl-terminal hydrolase 22 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 125358201 Sf3b3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E 125348716 Smarca4; transcription activator BRG1 isoform X1 K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 125338472 Smarca2; probable global transcription activator SNF2L2 isoform X2 K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 125349432 Smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 125362940 Smarcc2; SWI/SNF complex subunit SMARCC2 isoform X1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 125342391 Smarcc1; SWI/SNF complex subunit SMARCC1 isoform X1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 125347329 Smarcd3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 125364906 Smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 125365124 Smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 125365532 Smarce1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
E 125338866 Actb; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 125339041 actin, cytoplasmic 1-like K05692 ACTB_G1; actin beta/gamma 1
E 125353241 actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 125350357 actin, cytoplasmic 2-like isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 125338676 actin, cytoplasmic 1-like K05692 ACTB_G1; actin beta/gamma 1
E 125366560 Actg1; actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 125351948 Actl6a; actin-like protein 6A isoform X1 K11340 ACTL6A; actin-like protein 6A
E 125355050 Actl6b; actin-like protein 6B K11652 ACTL6B; actin-like protein 6B
E 125354761 Arid1a; AT-rich interactive domain-containing protein 1A isoform X1 K11653 ARID1; AT-rich interactive domain-containing protein 1
E 125357434 Arid1b; AT-rich interactive domain-containing protein 1B isoform X1 K11653 ARID1; AT-rich interactive domain-containing protein 1
E 125365673 Arid2; AT-rich interactive domain-containing protein 2 K11765 ARID2; AT-rich interactive domain-containing protein 2
E 125358599 Pbrm1; protein polybromo-1 isoform X1 K11757 PBRM1; protein polybromo-1
D SWI/SNF complex
E 125349432 Smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
E 125367513 Sub1; activated RNA polymerase II transcriptional coactivator p15 isoform X1 K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
E 125346396 Ccar1; cell division cycle and apoptosis regulator protein 1 K25827 CCAR1; cell division cycle and apoptosis regulator protein 1
E 125363853 Calcoco1; calcium-binding and coiled-coil domain-containing protein 1 isoform X1 K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1
C Other transcription-related factors
D Transcription elongation factors
E 125360470 Tcea1; transcription elongation factor A protein 1 isoform X1 K03145 TFIIS; transcription elongation factor S-II
E 125353986 Tcea2; transcription elongation factor A protein 2 isoform X1 K03145 TFIIS; transcription elongation factor S-II
E 125354705 Tcea3; transcription elongation factor A protein 3 K03145 TFIIS; transcription elongation factor S-II
E 125365276 Supt4h1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 125368282 Supt5h; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
E 125365841 Supt6h; transcription elongation factor SPT6 K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E 125355467 Ttf2; transcription termination factor 2 isoform X1 K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-]
E 125362736 Pcf11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 125360509 Cpsf1; cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 125356746 Cpsf3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 125367371 Cpsf4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 125361327 Ppp1ca; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 125349126 Ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 125356603 Ppp1cb; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 125345760 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 125368383 Sympk; symplekin isoform X1 K06100 SYMPK; symplekin
E 125354468 Ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 125344201 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 125353196 Xrn2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 125352787 Dxo; decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein
E 125353468 Rprd1b; regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 125363795 Rprd1a; regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 125343526 LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1A-like K15559 RTT103; regulator of Ty1 transposition protein 103
E 125366922 LOW QUALITY PROTEIN: splicing factor, proline- and glutamine-rich-like K13219 SFPQ; splicing factor, proline- and glutamine-rich
E 125354895 Sfpq; splicing factor, proline- and glutamine-rich isoform X1 K13219 SFPQ; splicing factor, proline- and glutamine-rich
E 125357430 Scaf8; SR-related and CTD-associated factor 8 isoform X1 K13191 RBM16; RNA-binding protein 16
E 125351517 Scaf4; SR-related and CTD-associated factor 4 isoform X1 K13167 SCAF4; SR-related and CTD-associated factor 4
E 125350633 Setx; probable helicase senataxin K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
E 125348786 Pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E 125367913 Paf1; RNA polymerase II-associated factor 1 homolog K15174 PAF1; RNA polymerase II-associated factor 1
E 125364503 parafibromin-like K15175 CDC73; parafibromin
E 125359635 Cdc73; parafibromin K15175 CDC73; parafibromin
E 125361479 Ctr9; RNA polymerase-associated protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 125340505 Leo1; RNA polymerase-associated protein LEO1 isoform X1 K15177 LEO1; RNA polymerase-associated protein LEO1
E 125340328 Rtf1; RNA polymerase-associated protein RTF1 homolog K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
E 125365041 Nelfa; LOW QUALITY PROTEIN: negative elongation factor A K15179 WHSC2; negative elongation factor A
E 125351805 negative elongation factor B K15180 COBRA1; negative elongation factor B
E 125345296 negative elongation factor B K15180 COBRA1; negative elongation factor B
E 125353926 Nelfcd; LOW QUALITY PROTEIN: negative elongation factor C/D K15181 TH1L; negative elongation factor C/D
E 125352784 Nelfe; negative elongation factor E isoform X1 K15182 RDBP; negative elongation factor E
D Super elongation complex (SEC)
E 125340116 Ell2; RNA polymerase II elongation factor ELL2 isoform X1 K15183 ELL; RNA polymerase II elongation factor ELL
E 125340607 Ell3; RNA polymerase II elongation factor ELL3 K15183 ELL; RNA polymerase II elongation factor ELL
E 125348927 Ell; RNA polymerase II elongation factor ELL K15183 ELL; RNA polymerase II elongation factor ELL
E 125364832 Aff1; LOW QUALITY PROTEIN: AF4/FMR2 family member 1 K15184 AFF1; AF4/FMR2 family member 1
E 125342236 Aff4; AF4/FMR2 family member 4 isoform X1 K15185 AFF4; AF4/FMR2 family member 4
E 125351756 Eaf2; ELL-associated factor 2 isoform X1 K15186 EAF; ELL-associated factor
E 125358621 Eaf1; ELL-associated factor 1 K15186 EAF; ELL-associated factor
E 125348566 Mllt1; protein ENL K15187 MLLT1_3; YEATS domain-containing protein 1/3
E 125359859 Mllt3; protein AF-9 isoform X1 K15187 MLLT1_3; YEATS domain-containing protein 1/3
E 125350745 Ccnt2; cyclin-T2 isoform X1 K15188 CCNT; cyclin T
E 125365383 Ccnt1; cyclin-T1 isoform X1 K15188 CCNT; cyclin T
E 125349355 Cdk9; cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D Little elongation complex (LEC)
E 125340116 Ell2; RNA polymerase II elongation factor ELL2 isoform X1 K15183 ELL; RNA polymerase II elongation factor ELL
E 125340607 Ell3; RNA polymerase II elongation factor ELL3 K15183 ELL; RNA polymerase II elongation factor ELL
E 125348927 Ell; RNA polymerase II elongation factor ELL K15183 ELL; RNA polymerase II elongation factor ELL
E 125367663 Ice1; little elongation complex subunit 1 K26143 ICE1; little elongation complex subunit 1
E 125340996 Ice2; little elongation complex subunit 2 isoform X1 K26144 ICE2; little elongation complex subunit 2
E 125356082 Zc3h8; zinc finger CCCH domain-containing protein 8 K24388 ZC3H8; zinc finger CCCH domain-containing protein 8
D Brd4/P-TEFb complex
E 125348869 Brd4; bromodomain-containing protein 4 isoform X1 K11722 BRD4; bromodomain-containing protein 4
E 125350745 Ccnt2; cyclin-T2 isoform X1 K15188 CCNT; cyclin T
E 125365383 Ccnt1; cyclin-T1 isoform X1 K15188 CCNT; cyclin T
E 125349355 Cdk9; cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E 125366490 Hexim1; protein HEXIM1 K15189 HEXIM1_2; protein HEXIM1/2
E 125366492 Hexim2; protein HEXIM2 K15189 HEXIM1_2; protein HEXIM1/2
E 125367518 Mepce; 7SK snRNA methylphosphate capping enzyme K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E 125341531 Larp7; la-related protein 7 K15191 LARP7; La-related protein 7
E 125350745 Ccnt2; cyclin-T2 isoform X1 K15188 CCNT; cyclin T
E 125365383 Ccnt1; cyclin-T1 isoform X1 K15188 CCNT; cyclin T
E 125349355 Cdk9; cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D DBIRD complex
E 125339284 Ccar2; cell cycle and apoptosis regulator protein 2 isoform X1 K25816 CCAR2; cell cycle and apoptosis regulator protein 2
E 125355530 DBIRD complex subunit ZNF326-like isoform X1 K13204 ZNF326; zinc finger protein 326
D Others
E 125368467 Gtf2i; general transcription factor II-I isoform X1 K03121 TFII-I; transcription initiation factor TFII-I
E 125368455 Gtf2ird1; general transcription factor II-I repeat domain-containing protein 1 isoform X1 K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1
E 125346274 Btaf1; TATA-binding protein-associated factor 172 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E 125355555 Dr1; protein Dr1 K21751 DR1; down-regulator of transcription 1
E 125361366 Drap1; dr1-associated corepressor K21752 DRAP1; Dr1-associated corepressor
E 125362669 Spty2d1; protein SPT2 homolog K15193 SPTY2D1; protein SPT2
E 125344157 Aff2; AF4/FMR2 family member 2 isoform X1 K15194 AFF2; AF4/FMR2 family member 2
E 125356098 Aff3; AF4/FMR2 family member 3 isoform X1 K15195 AFF3; AF4/FMR2 family member 3
E 125363797 Ctdp1; RNA polymerase II subunit A C-terminal domain phosphatase isoform X1 K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E 125362018 Ctdsp2; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 125342475 Ctdspl; CTD small phosphatase-like protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 125350308 Ctdsp1; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 125350785 Iws1; protein IWS1 homolog isoform X1 K17498 SPN1; transcription factor SPN1
E 125342617 Csrnp1; cysteine/serine-rich nuclear protein 1 K17494 CSRNP; cysteine/serine-rich nuclear protein
E 125350603 Csrnp3; cysteine/serine-rich nuclear protein 3 K17494 CSRNP; cysteine/serine-rich nuclear protein
E 125364803 Csrnp2; cysteine/serine-rich nuclear protein 2 K17494 CSRNP; cysteine/serine-rich nuclear protein
E 125340820 Rpap1; RNA polymerase II-associated protein 1 K20826 RPAP1; RNA polymerase II-associated protein 1
E 125355541 Rpap2; putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E 125365596 Rpap3; RNA polymerase II-associated protein 3 K23002 RPAP3; RNA polymerase II-associated protein 3
E 125346538 LOW QUALITY PROTEIN: cyclin-K-like K23326 CCNK; cyclin K
E 125363431 Ccnk; cyclin-K K23326 CCNK; cyclin K
E 125354772 Gpn2; GPN-loop GTPase 2 K24104 GPN; GPN-loop GTPase
E 125349133 Gpn3; GPN-loop GTPase 3 K24104 GPN; GPN-loop GTPase
E 125356619 Gpn1; GPN-loop GTPase 1 K24104 GPN; GPN-loop GTPase
E 125343474 Tceal1; transcription elongation factor A protein-like 1 K26769 TCEAL1; transcription elongation factor A protein-like 1
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E 125346507 Polr3a; DNA-directed RNA polymerase III subunit RPC1 isoform X1 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E 125359097 Polr3b; DNA-directed RNA polymerase III subunit RPC2 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E 125352547 Polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 125348394 Polr1d; DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E 125355503 Polr3c; DNA-directed RNA polymerase III subunit RPC3 K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3
E 125339595 Polr3d; DNA-directed RNA polymerase III subunit RPC4 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 125340264 Polr3e; DNA-directed RNA polymerase III subunit RPC5 isoform X1 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E 125353221 Polr3f; DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 125339879 Polr3g; DNA-directed RNA polymerase III subunit RPC7 K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 125355516 Polr3gl; DNA-directed RNA polymerase III subunit RPC7-like isoform X1 K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 125357880 Polr3h; DNA-directed RNA polymerase III subunit RPC8 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E 125338778 DNA-directed RNA polymerase III subunit RPC9 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E 125340544 Polr3k; DNA-directed RNA polymerase III subunit RPC10 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E 125348519 Polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 125358468 Polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 125343431 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 125352067 Polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 125367176 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125360755 Polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125350023 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125353133 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125361497 Polr2l; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E 125347614 Gtf3a; transcription factor IIIA K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E 125363066 Tbpl2; TATA box-binding protein-like 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125357302 Tbpl1; TATA box-binding protein-like 1 isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125357508 TATA-box-binding protein isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125362945 Brf1; transcription factor IIIB 90 kDa subunit isoform X1 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 125339338 Brf2; transcription factor IIIB 50 kDa subunit K15197 BRF2; transcription factor IIIB 50 kDa subunit
E 125367800 Bdp1; transcription factor TFIIIB component B'' homolog K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E 125341211 Gtf3c1; general transcription factor 3C polypeptide 1 isoform X1 K15199 GTF3C1; general transcription factor 3C polypeptide 1
E 125356631 Gtf3c2; general transcription factor 3C polypeptide 2 isoform X1 K15200 GTF3C2; general transcription factor 3C polypeptide 2
E 125350445 Gtf3c3; general transcription factor 3C polypeptide 3 isoform X1 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E 125350683 Gtf3c4; general transcription factor 3C polypeptide 4 isoform X1 K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
E 125350766 Gtf3c5; general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 125357571 Gtf3c6; general transcription factor 3C polypeptide 6 K15203 GTF3C6; general transcription factor 3C polypeptide 6
D TFIIIC, fungi type
E 125350766 Gtf3c5; general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 125350445 Gtf3c3; general transcription factor 3C polypeptide 3 isoform X1 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E 125363318 Snapc1; snRNA-activating protein complex subunit 1 isoform X1 K15208 SNAPC1; snRNA-activating protein complex subunit 1
E 125348685 Snapc2; snRNA-activating protein complex subunit 2 K15209 SNAPC2; snRNA-activating protein complex subunit 2
E 125356114 Snapc3; snRNA-activating protein complex subunit 3 K15210 SNAPC3; snRNA-activating protein complex subunit 3
E 125353351 LOW QUALITY PROTEIN: snRNA-activating protein complex subunit 4-like K09453 SNAPC4; snRNA-activating protein complex subunit 4
E 125351256 LOW QUALITY PROTEIN: snRNA-activating protein complex subunit 4-like K09453 SNAPC4; snRNA-activating protein complex subunit 4
E 125340315 snRNA-activating protein complex subunit 5-like K15211 SNAPC5; snRNA-activating protein complex subunit 5
E 125340316 snRNA-activating protein complex subunit 5-like K15211 SNAPC5; snRNA-activating protein complex subunit 5
E 125340363 Snapc5; snRNA-activating protein complex subunit 5 K15211 SNAPC5; snRNA-activating protein complex subunit 5
D Octamer transcription factors
E 125368472 Pou2f2; POU domain, class 2, transcription factor 2 isoform X1 K09364 POU2F; POU domain transcription factor, class 2
E 125349661 Pou2f3; POU domain, class 2, transcription factor 3 K09364 POU2F; POU domain transcription factor, class 2
E 125359713 Pou2f1; POU domain, class 2, transcription factor 1 isoform X1 K09364 POU2F; POU domain transcription factor, class 2
E 125352796 Pou5f1; POU domain, class 5, transcription factor 1 K09367 POU5F; POU domain transcription factor, class 5
D Others
E 125362729 Znf143; zinc finger protein 143 isoform X1 K20828 ZNF143_76; zinc finger protein 143/76
E 125352667 Znf76; zinc finger protein 76 isoform X1 K20828 ZNF143_76; zinc finger protein 143/76
E 125360534 Maf1; repressor of RNA polymerase III transcription MAF1 homolog isoform X1 K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E 125356209 Polr1a; DNA-directed RNA polymerase I subunit RPA1 isoform X1 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E 125356084 Polr1b; DNA-directed RNA polymerase I subunit RPA2 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E 125352547 Polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 125348394 Polr1d; DNA-directed RNA polymerases I and III subunit RPAC2 K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E 125343682 Polr1e; DNA-directed RNA polymerase I subunit RPA49 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E 125346840 Polr1f; DNA-directed RNA polymerase I subunit RPA43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
E 125368330 Polr1g; DNA-directed RNA polymerase I subunit RPA34 K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34
E 125352840 Polr1h; DNA-directed RNA polymerase I subunit RPA12 K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12
D Pol I, II, III common subunits
E 125348519 Polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 125358468 Polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 125343431 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 125352067 Polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 125367176 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125360755 Polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125350023 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125353133 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 125361497 Polr2l; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E 125363066 Tbpl2; TATA box-binding protein-like 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125357302 Tbpl1; TATA box-binding protein-like 1 isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125357508 TATA-box-binding protein isoform X1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 125360127 Taf1a; TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1 K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A
E 125356742 Taf1b; TATA box-binding protein-associated factor RNA polymerase I subunit B K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B
E 125358125 Taf1c; TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1 K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C
E 125350776 Taf1d; TATA box-binding protein-associated factor RNA polymerase I subunit D K15215 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D
C Other transcription-related factors
D UBF
E 125366496 Ubtf; nucleolar transcription factor 1 isoform X1 K09273 UBTF; upstream-binding transcription factor
D Transcription initiation factors
E 125340685 Rrn3; RNA polymerase I-specific transcription initiation factor RRN3 K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
D Transcription elongation factors
E 125365276 Supt4h1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 125368282 Supt5h; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E 125341642 Smarca5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
E 125362635 Baz2a; bromodomain adjacent to zinc finger domain protein 2A isoform X1 K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A
D CTDK-I complex
D Transcription termination factors
E 125350662 Ttf1; transcription termination factor 1 K15225 TTF1; transcription termination factor 1
E 125365666 Cavin1; caveolae-associated protein 1 isoform X1 K19387 PTRF; polymerase I and transcript release factor
D Others
E 125346127 Nolc1; nucleolar and coiled-body phosphoprotein 1 isoform X1 K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E 125355373 Gtf2b; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E 125351743 Gtf2e1; general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024