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Transcription Machinery - Planctomyces sp. SH-PL14
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E VT03_08550 rpoA_1; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E VT03_24890 rpoA_2; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E VT03_08405 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E VT03_08400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E VT03_19670 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E VT03_14625 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
E VT03_32530 sigA_4; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
E VT03_11480 sigA_1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
E VT03_29035 sigA_3; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
E VT03_01930 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E VT03_03895 rpoE_1; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E VT03_11650 rpoE_6; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E VT03_08290 rpoE_4; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E VT03_02265 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E VT03_30135 fliA_2; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
E VT03_22285 fliA_1; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E VT03_29875 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
E VT03_04270 hypothetical protein K03625 nusB; transcription antitermination protein NusB
E VT03_08430 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
E VT03_23160 rsbT_2; Serine/threonine-protein kinase RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E VT03_23165 rsbS; RsbT antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS
E VT03_17070 rsbRA_3; RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
E VT03_03650 rsbRA_1; RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
E VT03_03710 rsbRA_2; RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
E VT03_23170 rsbRA_4; RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
E VT03_12365 rsbU_2; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E VT03_28305 rsbU_4; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E VT03_16450 rsbP; Phosphoserine phosphatase RsbP K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E VT03_16470 rsbU_3; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E VT03_06690 rsbU_1; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E VT03_16585 rsbV; Anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E VT03_04835 STAS domain protein K04749 rsbV; anti-sigma B factor antagonist
E VT03_27560 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E VT03_11530 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E VT03_16580 btrW; Serine/threonine-protein kinase BtrW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E VT03_29890 yocK_3; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
E VT03_32760 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E VT03_32850 hypothetical protein K03628 rho; transcription termination factor Rho
E VT03_13260 hypothetical protein K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024