+F Chromosome and associated proteins KO
#
Chromosome and Associated Proteins - Paenibacillus macerans
%
!
AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D LMZ02_04990 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E LMZ02_23780 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
D LMZ02_28765 flotillin family protein K07192 FLOT; flotillin
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
#
AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D LMZ02_05760 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LMZ02_24640 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
C Other nucleoid associated proteins
D LMZ02_05445 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LMZ02_12685 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D LMZ02_14455 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D LMZ02_18140 RNA chaperone Hfq K03666 hfq; host factor-I protein
D LMZ02_20175 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LMZ02_28525 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LMZ02_19570 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D LMZ02_23760 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D LMZ02_24845 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D LMZ02_24840 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
C Divisome proteins
D LMZ02_26235 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LMZ02_01785 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D LMZ02_07790 essC; type VII secretion protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LMZ02_23215 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LMZ02_26240 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D LMZ02_25775 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LMZ02_26260 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D LMZ02_01780 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LMZ02_26230 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LMZ02_01060 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LMZ02_17870 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LMZ02_18485 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LMZ02_18495 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LMZ02_24010 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C Inhibitors of FtsZ assembly
D LMZ02_29335 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LMZ02_29330 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D LMZ02_26165 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D LMZ02_26180 cell division protein SepF K09772 sepF; cell division inhibitor SepF
C Other chromosome partitioning proteins
D LMZ02_02290 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LMZ02_29350 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LMZ02_29345 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D LMZ02_29340 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D LMZ02_29325 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D LMZ02_05370 AAA family ATPase K03496 parA; chromosome partitioning protein
D LMZ02_17700 ParA family protein K03496 parA; chromosome partitioning protein
D LMZ02_05365 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMZ02_05375 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMZ02_17695 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMZ02_18775 gyrA; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LMZ02_18770 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LMZ02_05385 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LMZ02_05380 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LMZ02_23570 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D LMZ02_21220 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D LMZ02_08875 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D LMZ02_25035 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D LMZ02_05755 mazG; nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D LMZ02_01055 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LMZ02_11285 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D LMZ02_11515 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D LMZ02_13765 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D LMZ02_29455 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D LMZ02_06465 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024