+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Paenibacillus marchantiae

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E PTQ21_16305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D PTQ21_29840 flotillin family protein K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D PTQ21_25560 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTQ21_05420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PTQ21_10520 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) C Other nucleoid associated proteins D PTQ21_05180 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PTQ21_14670 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D PTQ21_03155 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D PTQ21_24490 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PTQ21_21555 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D PTQ21_16310 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D PTQ21_25770 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D PTQ21_25765 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D PTQ21_27335 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D PTQ21_05440 septum formation initiator family protein K13052 divIC; cell division protein DivIC D PTQ21_02040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PTQ21_16800 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PTQ21_17080 essC; type VII secretion protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PTQ21_27395 hypothetical protein K03586 ftsL; cell division protein FtsL D PTQ21_27340 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D PTQ21_26680 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D PTQ21_27360 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW D PTQ21_02035 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PTQ21_27330 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PTQ21_15735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTQ21_25155 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTQ21_25160 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTQ21_01525 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PTQ21_06985 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C Inhibitors of FtsZ assembly D PTQ21_30335 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D PTQ21_30330 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D PTQ21_27280 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein D PTQ21_27295 cell division protein SepF K09772 sepF; cell division inhibitor SepF C Other chromosome partitioning proteins D PTQ21_30350 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PTQ21_02390 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PTQ21_30345 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D PTQ21_30340 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D PTQ21_02520 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA D PTQ21_02515 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA D PTQ21_05115 AAA family ATPase K03496 parA; chromosome partitioning protein D PTQ21_05110 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PTQ21_05120 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PTQ21_25080 gyrA; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PTQ21_25085 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PTQ21_05130 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PTQ21_05125 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PTQ21_16445 trmFO; FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PTQ21_17990 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC D PTQ21_12890 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D PTQ21_20910 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D PTQ21_25860 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D PTQ21_10530 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D PTQ21_05415 mazG; nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D PTQ21_01520 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PTQ21_30440 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein D PTQ21_06060 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024