+D GENES KO
#
KEGG Orthology (KO) - Paramixta manurensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pmak00010]
D PMPD1_3173 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMPD1_4034 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMPD1_0572 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_3880 class 1 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMPD1_4118 class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMPD1_1070 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_2877 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_3637 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMPD1_4122 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMPD1_0061 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_2389 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_3638 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMPD1_1475 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4320 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_0788 phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4138 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PMPD1_3541 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4319 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_2090 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_2537 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_2077 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMPD1_0889 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMPD1_0890 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_2293 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMPD1_1029 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PMPD1_0903 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D PMPD1_3458 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PMPD1_4007 Zn-dependent NAD(P)-binding oxidoreductase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PMPD1_3966 gluconate 2-dehydrogenase cytochrome c subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_1912 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMPD1_1476 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PMPD1_1708 bifunctional glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D PMPD1_4194 Glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_2390 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PMPD1_0315 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMPD1_0540 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_1135 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_2625 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_3619 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_3195 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMPD1_1833 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMPD1_2144 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:pmak00020]
D PMPD1_1448 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PMPD1_2335 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_0906 Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_1861 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMPD1_1453 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PMPD1_1454 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_1456 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMPD1_1455 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMPD1_1451 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_1452 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_1449 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMPD1_1450 succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMPD1_3926 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_3927 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_3928 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMPD1_3929 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMPD1_1976 Fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PMPD1_2151 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMPD1_3120 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMPD1_0315 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMPD1_0889 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMPD1_0890 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMPD1_2293 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pmak00030]
D PMPD1_4034 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMPD1_0572 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PMPD1_2535 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMPD1_1490 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PMPD1_3866 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PMPD1_2827 NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMPD1_3698 decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMPD1_0329 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMPD1_1125 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMPD1_3009 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3010 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3219 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3467 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3468 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3641 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_0799 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMPD1_3218 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMPD1_3631 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PMPD1_1117 Ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMPD1_3217 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMPD1_0051 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PMPD1_1126 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PMPD1_3699 SIS domain-containing protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PMPD1_0164 Xylulose-5-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D PMPD1_0761 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PMPD1_0617 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMPD1_0774 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMPD1_3229 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMPD1_4290 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMPD1_0763 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_2725 ribose 1,5-bisphosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D PMPD1_0362 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMPD1_2005 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMPD1_0571 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMPD1_2534 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMPD1_1748 membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D PMPD1_3955 Glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D PMPD1_3967 gluconate 2-dehydrogenase flavoprotein subunit K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D PMPD1_3968 gluconate 2-dehydrogenase gamma chain K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D PMPD1_0037 gluconate 2-dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMPD1_0287 Gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PMPD1_3701 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D PMPD1_0039 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PMPD1_0154 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PMPD1_1070 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_2877 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_3637 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMPD1_3880 class 1 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMPD1_4118 class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pmak00040]
D PMPD1_3963 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D PMPD1_2049 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PMPD1_2048 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PMPD1_3844 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PMPD1_3843 Altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D PMPD1_0240 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D PMPD1_2872 mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D PMPD1_2875 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D PMPD1_2873 Zn-dependent oxidoreductase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D PMPD1_2374 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMPD1_2375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2840 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_0682 Xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D PMPD1_0329 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMPD1_1125 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMPD1_0075 ribulose kinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D PMPD1_0078 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PMPD1_0576 Pentose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PMPD1_1076 Carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PMPD1_2271 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PMPD1_1232 Mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D PMPD1_2270 D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D PMPD1_2712 D-lyxose/D-mannose family sugar isomerase K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D PMPD1_3743 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PMPD1_3046 Ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
D PMPD1_1068 carbohydrate kinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D PMPD1_1254 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D PMPD1_1256 Fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pmak00051]
D PMPD1_1163 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMPD1_2150 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMPD1_2846 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PMPD1_2847 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PMPD1_1068 carbohydrate kinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D PMPD1_1254 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D PMPD1_1256 Fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D PMPD1_3766 L-fucose dehydrogenase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D PMPD1_3767 L-fuconolactonase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D PMPD1_3768 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D PMPD1_1355 2-keto-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D PMPD1_2651 Mannosyl-3-phosphoglycerate phosphatase-related protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_3880 class 1 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMPD1_4118 class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMPD1_0115 Mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D PMPD1_1127 sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D PMPD1_2917 Phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PMPD1_1232 Mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D PMPD1_2270 D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D PMPD1_1070 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_2877 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_3637 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMPD1_4122 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMPD1_3228 Allose kinase K00881 alsK; allose kinase [EC:2.7.1.55]
D PMPD1_1117 Ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMPD1_3217 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMPD1_3227 Ribulose-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D PMPD1_2916 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PMPD1_2421 PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMPD1_2422 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D PMPD1_2423 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D PMPD1_1124 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D PMPD1_0116 PTS system, mannitol-specific enzyme IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMPD1_1128 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMPD1_3004 sugar phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D PMPD1_2050 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D PMPD1_1095 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PMPD1_1096 PTS system, glucitol/sorbitol-specific IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PMPD1_1094 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:pmak00052]
D PMPD1_1476 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PMPD1_1477 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMPD1_1478 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PMPD1_2839 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMPD1_2375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2840 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_3173 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMPD1_1148 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PMPD1_0230 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PMPD1_0228 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PMPD1_0229 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_0016 D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D PMPD1_0014 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D PMPD1_0015 2-dehydro-3-deoxyphosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
C 00053 Ascorbate and aldarate metabolism [PATH:pmak00053]
D PMPD1_2374 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMPD1_2373 UDP-glucuronate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMPD1_3013 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMPD1_3012 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMPD1_3011 PTS system, ascorbate-specific IIC component K03475 ulaA; ascorbate PTS system EIIC component
D PMPD1_0682 Xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_3742 4-hydroxy-tetrahydrodipicolinate synthase K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D PMPD1_3743 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PMPD1_3482 L-rhamnonate dehydratase K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C 00500 Starch and sucrose metabolism [PATH:pmak00500]
D PMPD1_2375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2840 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_1529 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PMPD1_0141 Cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PMPD1_0539 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMPD1_1134 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMPD1_0538 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMPD1_1132 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMPD1_0541 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PMPD1_1133 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PMPD1_0540 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_1135 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_2625 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_3619 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PMPD1_0295 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PMPD1_0296 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PMPD1_0293 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMPD1_0297 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PMPD1_0303 Alpha-1,4 glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PMPD1_0294 glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D PMPD1_2619 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PMPD1_0304 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PMPD1_3195 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMPD1_2144 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMPD1_2583 Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D PMPD1_2584 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D PMPD1_1883 alpha,alpha-trehalase TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D PMPD1_1483 PTS system, trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PMPD1_0542 Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D PMPD1_1482 Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_3173 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMPD1_4034 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMPD1_0572 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PMPD1_1163 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:pmak00620]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMPD1_2293 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PMPD1_0889 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMPD1_0890 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_1650 Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMPD1_1029 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_0903 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D PMPD1_3458 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PMPD1_4007 Zn-dependent NAD(P)-binding oxidoreductase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PMPD1_3966 gluconate 2-dehydrogenase cytochrome c subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D PMPD1_3007 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMPD1_3008 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMPD1_2090 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_2537 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_0961 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMPD1_0444 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMPD1_0443 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMPD1_3028 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMPD1_1704 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_1912 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PMPD1_2589 CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D PMPD1_1350 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PMPD1_1627 ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PMPD1_2290 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PMPD1_1526 Quinone-dependent D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D PMPD1_2104 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PMPD1_4326 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PMPD1_0984 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMPD1_1672 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMPD1_1907 glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PMPD1_0037 gluconate 2-dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMPD1_2895 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PMPD1_3211 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMPD1_1976 Fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PMPD1_2151 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMPD1_3120 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D PMPD1_3926 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_3927 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_3928 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMPD1_3929 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMPD1_4099 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMPD1_0315 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMPD1_2077 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMPD1_4050 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D PMPD1_0854 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pmak00630]
D PMPD1_4049 Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D PMPD1_4050 Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMPD1_1448 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PMPD1_2335 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_0906 Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMPD1_0688 catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_2045 Catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_2977 Catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_1907 glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PMPD1_0037 gluconate 2-dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMPD1_0330 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PMPD1_4196 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMPD1_3320 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMPD1_3621 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMPD1_3623 glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_3622 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMPD1_1118 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D PMPD1_3547 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMPD1_0571 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMPD1_2534 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMPD1_0102 Formate dehydrogenase O alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMPD1_0101 Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PMPD1_0100 Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PMPD1_2379 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PMPD1_1552 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:pmak00640]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMPD1_2589 CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D PMPD1_3007 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMPD1_3008 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_1650 Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMPD1_0448 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_0961 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMPD1_0444 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMPD1_0443 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMPD1_3028 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PMPD1_1455 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMPD1_1456 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMPD1_2335 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_0906 Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_4049 Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D PMPD1_1699 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D PMPD1_3784 alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D PMPD1_0578 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:pmak00650]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_2588 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMPD1_1915 Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PMPD1_3491 maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PMPD1_1451 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_1452 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_1449 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMPD1_1450 succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMPD1_3926 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_3927 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_3928 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMPD1_3929 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PMPD1_1709 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_3455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_4178 Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_1650 Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMPD1_2293 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PMPD1_0855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_4283 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_0856 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMPD1_4282 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMPD1_1078 meso-butanediol dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D PMPD1_3460 SDR family oxidoreductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D PMPD1_1152 3-oxoacyl-ACP reductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:pmak00660]
D PMPD1_0855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_4283 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_0856 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMPD1_4282 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMPD1_1455 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMPD1_1456 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMPD1_0852 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_3160 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_0851 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_3159 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_0853 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pmak00562]
D PMPD1_3315 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMPD1_4122 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pmak00190]
D PMPD1_2999 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PMPD1_2998 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PMPD1_2997 NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D PMPD1_2996 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PMPD1_2995 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PMPD1_2994 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PMPD1_2993 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PMPD1_2992 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PMPD1_2991 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PMPD1_2990 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PMPD1_2989 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PMPD1_2988 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PMPD1_2987 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PMPD1_1840 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PMPD1_3156 NADH dehydrogenase FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PMPD1_1451 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_1452 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_1449 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMPD1_1450 succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMPD1_3926 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_3927 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_3928 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMPD1_3929 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMPD1_1198 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMPD1_1199 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PMPD1_1200 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PMPD1_1201 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PMPD1_1202 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PMPD1_1457 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMPD1_2030 Cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMPD1_1458 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMPD1_2029 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMPD1_4310 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMPD1_4312 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMPD1_4311 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMPD1_4309 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMPD1_4313 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMPD1_4306 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMPD1_4308 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMPD1_4307 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMPD1_3883 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PMPD1_4317 Inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PMPD1_3268 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pmak00710]
D PMPD1_3638 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMPD1_0061 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_2389 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_1070 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_2877 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_3637 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMPD1_3880 class 1 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMPD1_4118 class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMPD1_3009 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3010 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3219 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3467 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3468 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3641 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3631 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PMPD1_1117 Ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMPD1_3217 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMPD1_0345 Phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19]
D PMPD1_4122 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMPD1_0329 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMPD1_1125 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMPD1_0799 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMPD1_3218 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMPD1_4099 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMPD1_0315 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMPD1_3211 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pmak00720]
D PMPD1_2293 Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PMPD1_2077 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMPD1_4099 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMPD1_1976 Fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PMPD1_2151 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMPD1_3120 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D PMPD1_1451 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_1452 Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_1449 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PMPD1_1450 succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D PMPD1_3926 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_3927 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_3928 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMPD1_3929 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMPD1_1268 Fumarate reductase flavoprotein subunit K28482 frd; fumarate reductase (NADH) [EC:1.3.1.6]
D PMPD1_1456 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMPD1_1455 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMPD1_1861 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMPD1_2335 Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_0906 Aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMPD1_0961 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMPD1_0444 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMPD1_0443 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMPD1_3028 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMPD1_1285 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PMPD1_4100 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PMPD1_3008 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMPD1_3007 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pmak00680]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_2908 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D PMPD1_0102 Formate dehydrogenase O alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMPD1_0101 Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PMPD1_0100 Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PMPD1_3320 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMPD1_3541 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4319 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4099 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMPD1_1070 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_2877 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PMPD1_3637 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMPD1_3880 class 1 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMPD1_4118 class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_0051 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PMPD1_1126 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PMPD1_3699 SIS domain-containing protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PMPD1_2887 Trimethylamine N-oxide reductase I cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PMPD1_2888 Trimethylamine N-oxide reductase I catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMPD1_3453 Aldehyde-activating protein K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D PMPD1_3007 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMPD1_3008 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMPD1_2077 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PMPD1_1475 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4320 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_0788 phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4138 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PMPD1_0569 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_3630 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_1653 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMPD1_0766 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pmak00910]
D PMPD1_3238 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PMPD1_3237 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3236 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3234 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_0334 Nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D PMPD1_0333 Nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D PMPD1_1630 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PMPD1_4196 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMPD1_0476 Glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PMPD1_0475 Glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PMPD1_1905 Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D PMPD1_0914 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PMPD1_3385 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PMPD1_0439 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pmak00920]
D PMPD1_3204 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PMPD1_4124 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PMPD1_3203 sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PMPD1_3202 sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PMPD1_3201 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PMPD1_0357 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D PMPD1_0359 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D PMPD1_0358 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PMPD1_0360 Alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D PMPD1_1003 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1939 NitT/TauT family transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1942 sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1952 Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_2207 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_3180 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1679 Alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1940 NitT/TauT family transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1948 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1949 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1678 Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PMPD1_1947 Alkanesulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PMPD1_1943 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PMPD1_2220 Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PMPD1_3179 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D PMPD1_1680 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PMPD1_3513 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMPD1_3514 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMPD1_3512 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PMPD1_3891 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMPD1_3518 Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PMPD1_3520 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PMPD1_2199 assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PMPD1_3519 assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D PMPD1_3303 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PMPD1_0299 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PMPD1_4133 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMPD1_1217 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMPD1_3192 Cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMPD1_4051 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PMPD1_4102 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pmak00061]
D PMPD1_0961 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMPD1_0444 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMPD1_0443 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMPD1_3028 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMPD1_1760 acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1761 Acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1826 Acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1824 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMPD1_1823 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMPD1_1770 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMPD1_3049 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMPD1_1773 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMPD1_1827 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMPD1_0524 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1772 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1825 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2186 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2763 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_4170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1690 bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PMPD1_0956 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMPD1_2316 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMPD1_2410 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pmak00071]
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_1006 Acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PMPD1_2410 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PMPD1_3589 bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMPD1_1029 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:pmak00074]
D PMPD1_3332 Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PMPD1_2951 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D PMPD1_1760 acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1761 Acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1826 Acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1824 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pmak00561]
D PMPD1_3547 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_3458 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PMPD1_4007 Zn-dependent NAD(P)-binding oxidoreductase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PMPD1_2196 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PMPD1_3214 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PMPD1_2195 DAK2 domain-containing protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PMPD1_3213 Dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PMPD1_0578 Glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PMPD1_3461 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMPD1_3675 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMPD1_4117 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMPD1_4020 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMPD1_1822 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMPD1_3815 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMPD1_0129 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMPD1_3787 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMPD1_4019 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:pmak00564]
D PMPD1_4134 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PMPD1_0298 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMPD1_0684 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMPD1_3232 FAD/NAD(P)-binding oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMPD1_3680 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMPD1_4020 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMPD1_3815 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMPD1_0129 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMPD1_3787 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMPD1_0645 Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D PMPD1_4019 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PMPD1_4240 Phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PMPD1_4236 Lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PMPD1_0282 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PMPD1_4234 Glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PMPD1_3589 bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PMPD1_4123 CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D PMPD1_0951 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PMPD1_3411 Phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PMPD1_3923 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PMPD1_1721 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PMPD1_1188 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PMPD1_2333 phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D PMPD1_3329 Acid phosphatase AphA K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D PMPD1_1510 Cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PMPD1_2361 Cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PMPD1_1781 Cardiolipin synthase C K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pmak00565]
D PMPD1_1069 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D PMPD1_2704 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D PMPD1_4240 Phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:pmak00600]
D PMPD1_1148 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PMPD1_0543 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_1429 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D PMPD1_4240 Phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D PMPD1_4240 Phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pmak00592]
D PMPD1_4240 Phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pmak01040]
D PMPD1_1276 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PMPD1_1223 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PMPD1_2357 Acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pmak00230]
D PMPD1_3796 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMPD1_0319 ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PMPD1_0763 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_0362 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMPD1_2005 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMPD1_3024 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMPD1_4054 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PMPD1_3264 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMPD1_2533 Formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PMPD1_3326 Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PMPD1_3263 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PMPD1_1279 N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PMPD1_1280 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PMPD1_3251 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PMPD1_1855 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMPD1_4053 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMPD1_1249 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMPD1_1262 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMPD1_2627 SurE family 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMPD1_3500 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMPD1_1421 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PMPD1_1259 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D PMPD1_0764 Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMPD1_2765 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMPD1_1161 Pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PMPD1_3415 Polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMPD1_3831 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMPD1_2776 Nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D PMPD1_0913 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PMPD1_3288 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMPD1_3301 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMPD1_0787 Inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D PMPD1_3660 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PMPD1_1012 Xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PMPD1_1911 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMPD1_3287 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMPD1_0880 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D PMPD1_4181 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PMPD1_2973 Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMPD1_3396 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMPD1_2974 Ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMPD1_3397 class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMPD1_0536 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PMPD1_0939 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PMPD1_3002 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D PMPD1_4183 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMPD1_3269 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PMPD1_4274 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PMPD1_3544 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PMPD1_4253 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D PMPD1_3909 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMPD1_2140 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PMPD1_2707 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PMPD1_3553 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PMPD1_3893 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PMPD1_1257 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMPD1_3543 Nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMPD1_3794 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PMPD1_0819 Bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D PMPD1_3512 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PMPD1_3513 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMPD1_3514 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMPD1_0990 allantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D PMPD1_0991 Allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5]
D PMPD1_1002 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D PMPD1_1001 Aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D PMPD1_0993 AtzE family amidohydrolase K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
D PMPD1_0995 Putative gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:pmak00240]
D PMPD1_0814 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMPD1_0813 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMPD1_0546 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PMPD1_0545 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PMPD1_1796 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PMPD1_3869 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PMPD1_1681 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PMPD1_4165 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PMPD1_2330 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PMPD1_0947 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PMPD1_3301 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMPD1_3543 Nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMPD1_0453 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PMPD1_3837 Metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D PMPD1_3542 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PMPD1_1655 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PMPD1_2858 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PMPD1_1262 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMPD1_2627 SurE family 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMPD1_3500 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMPD1_1421 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PMPD1_0700 pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D PMPD1_2776 Nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D PMPD1_4227 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PMPD1_1161 Pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PMPD1_3262 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMPD1_3893 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PMPD1_3553 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PMPD1_2894 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PMPD1_0335 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMPD1_0536 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PMPD1_2857 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PMPD1_2973 Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMPD1_3396 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMPD1_2974 Ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMPD1_3397 class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMPD1_3002 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D PMPD1_1830 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PMPD1_4163 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PMPD1_0762 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PMPD1_2371 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PMPD1_3580 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMPD1_2166 NAD(P)-binding L-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pmak00250]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_3343 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PMPD1_2386 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMPD1_1580 Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PMPD1_1420 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PMPD1_1004 Carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PMPD1_0208 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D PMPD1_3001 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMPD1_3943 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PMPD1_4095 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMPD1_4094 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMPD1_3909 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMPD1_1855 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMPD1_0546 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PMPD1_0545 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PMPD1_1709 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_3455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_4178 Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_0476 Glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PMPD1_0475 Glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PMPD1_2607 Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMPD1_4196 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMPD1_0814 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMPD1_0813 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMPD1_4316 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMPD1_3024 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pmak00260]
D PMPD1_4036 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMPD1_0793 Bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMPD1_4101 Bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMPD1_0292 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMPD1_0794 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PMPD1_0795 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PMPD1_1626 Pyridoxal phosphate-dependent transferase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PMPD1_3320 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMPD1_1907 glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D PMPD1_0037 gluconate 2-dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D PMPD1_3547 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMPD1_1475 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4320 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_0788 phosphoglycerate mutase GpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4138 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PMPD1_0569 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_3630 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_1653 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMPD1_0766 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PMPD1_2166 NAD(P)-binding L-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PMPD1_4142 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PMPD1_4141 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PMPD1_3621 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMPD1_3623 glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_3622 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMPD1_3411 Phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PMPD1_2129 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PMPD1_2128 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D PMPD1_2418 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMPD1_4279 L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMPD1_3606 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMPD1_2351 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMPD1_2350 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PMPD1_2538 L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:pmak00270]
D PMPD1_4133 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMPD1_1217 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMPD1_3192 Cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMPD1_3781 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_2143 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_2563 cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_4046 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMPD1_3757 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMPD1_4229 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMPD1_3649 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMPD1_0908 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PMPD1_0909 Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PMPD1_1716 Acyl-homoserine-lactone synthase K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PMPD1_1072 Acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PMPD1_0938 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PMPD1_3415 Polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMPD1_3831 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMPD1_4010 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMPD1_0912 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PMPD1_2436 Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PMPD1_2659 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMPD1_3431 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PMPD1_4036 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMPD1_0793 Bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMPD1_4101 Bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMPD1_0292 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMPD1_0794 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PMPD1_4051 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PMPD1_4102 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMPD1_4281 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMPD1_3432 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PMPD1_3654 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_3303 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PMPD1_0208 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D PMPD1_3606 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMPD1_2611 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D PMPD1_0465 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMPD1_2418 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMPD1_3200 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D PMPD1_0569 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_3630 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_1653 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pmak00280]
D PMPD1_4281 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_2767 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pmak00290]
D PMPD1_4279 L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMPD1_0852 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_3160 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_0851 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_3159 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMPD1_0853 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PMPD1_0855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_4283 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_0856 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMPD1_4282 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMPD1_4277 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMPD1_4280 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMPD1_4281 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMPD1_0036 Valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PMPD1_3001 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMPD1_0854 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pmak00300]
D PMPD1_4036 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMPD1_0793 Bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMPD1_4101 Bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMPD1_0292 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMPD1_1090 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMPD1_3253 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMPD1_0812 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PMPD1_0942 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PMPD1_0341 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMPD1_0624 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMPD1_3247 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMPD1_4250 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMPD1_2676 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMPD1_3602 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMPD1_0862 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMPD1_0863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pmak00310]
D PMPD1_1454 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_3606 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMPD1_0962 Lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PMPD1_1709 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_3455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_4178 Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_2266 VOC family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D PMPD1_2079 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pmak00220]
D PMPD1_0547 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PMPD1_4095 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMPD1_4094 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMPD1_0783 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D PMPD1_0784 Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D PMPD1_4196 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMPD1_0814 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMPD1_0813 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_3001 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMPD1_3565 Amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PMPD1_4096 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PMPD1_4097 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PMPD1_0341 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMPD1_3731 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D PMPD1_4098 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pmak00330]
D PMPD1_0346 Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D PMPD1_0335 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMPD1_3648 Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PMPD1_3643 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PMPD1_3673 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PMPD1_0909 Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PMPD1_0908 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_3390 Diamine N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D PMPD1_0234 Glutamyl-tRNA amidotransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_1938 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_2032 Arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PMPD1_2034 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D PMPD1_2031 Acetylornithine/succinyldiaminopimelate aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D PMPD1_2033 N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PMPD1_2035 Succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D PMPD1_2813 gamma-glutamylputrescine synthase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D PMPD1_2816 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PMPD1_2814 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D PMPD1_1154 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PMPD1_2607 Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMPD1_1016 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMPD1_1017 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pmak00340]
D PMPD1_2818 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PMPD1_2825 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PMPD1_2823 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PMPD1_2822 Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PMPD1_2824 Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PMPD1_2821 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PMPD1_2820 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMPD1_2819 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PMPD1_1319 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PMPD1_1547 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PMPD1_1558 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PMPD1_1546 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PMPD1_1551 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PMPD1_1550 N-formimino-L-glutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D PMPD1_1552 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pmak00350]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_2820 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMPD1_4010 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMPD1_1029 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PMPD1_2681 4-hydroxy-2-oxovalerate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PMPD1_3682 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PMPD1_1709 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_3455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_4178 Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pmak00360]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_2820 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMPD1_4010 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMPD1_2398 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D PMPD1_3838 Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D PMPD1_0234 Glutamyl-tRNA amidotransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_1938 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pmak00380]
D PMPD1_1454 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_3174 Indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D PMPD1_0234 Glutamyl-tRNA amidotransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_1938 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_0688 catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_2045 Catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_2977 Catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_3838 Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pmak00400]
D PMPD1_1474 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMPD1_2075 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMPD1_3423 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMPD1_0326 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PMPD1_0445 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PMPD1_0422 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PMPD1_0325 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PMPD1_1159 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PMPD1_1654 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PMPD1_3055 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PMPD1_2346 Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMPD1_2347 Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PMPD1_2348 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PMPD1_2349 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D PMPD1_2351 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMPD1_2350 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PMPD1_3422 bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PMPD1_3419 Chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_2820 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMPD1_4010 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pmak00410]
D PMPD1_0919 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_0920 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:pmak00430]
D PMPD1_0284 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMPD1_0360 Alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D PMPD1_3008 Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMPD1_3007 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:pmak00440]
D PMPD1_2730 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D PMPD1_2732 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D PMPD1_2731 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D PMPD1_2727 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D PMPD1_2726 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D PMPD1_2729 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D PMPD1_2724 phosphoribosyl 1,2-cyclic phosphate phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pmak00450]
D PMPD1_4102 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMPD1_3781 Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_2143 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_2563 cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_4046 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMPD1_3757 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMPD1_4229 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMPD1_0912 Methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D PMPD1_2086 cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PMPD1_1642 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PMPD1_3513 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMPD1_3514 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMPD1_2383 Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMPD1_0097 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMPD1_3868 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMPD1_2891 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pmak00460]
D PMPD1_1529 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PMPD1_0284 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMPD1_2386 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PMPD1_1580 Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PMPD1_3320 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pmak00470]
D PMPD1_2397 catabolic alanine racemase DadX K01775 alr; alanine racemase [EC:5.1.1.1]
D PMPD1_0869 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMPD1_3606 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMPD1_4087 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMPD1_0865 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMPD1_2301 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D PMPD1_2611 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D PMPD1_4250 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMPD1_2676 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMPD1_3602 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMPD1_3743 2,5-dioxovalerate dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D PMPD1_2398 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:pmak00480]
D PMPD1_0284 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMPD1_2016 Gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D PMPD1_1443 5-oxoprolinase subunit A K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PMPD1_1441 Allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D PMPD1_1442 Allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D PMPD1_3432 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PMPD1_3654 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D PMPD1_0556 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMPD1_3305 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PMPD1_1677 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMPD1_1011 Aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PMPD1_0153 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_0163 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_2122 glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_3016 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_3997 Putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_0193 Glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PMPD1_1861 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMPD1_2827 NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMPD1_3698 decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMPD1_2535 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMPD1_2064 Thioredoxin/glutathione peroxidase BtuE K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PMPD1_3673 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PMPD1_0909 Polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pmak00520]
D PMPD1_2117 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PMPD1_3195 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMPD1_3978 PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PMPD1_3979 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PMPD1_1325 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D PMPD1_1326 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PMPD1_1425 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMPD1_4315 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMPD1_4267 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PMPD1_0497 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMPD1_4085 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMPD1_1838 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PMPD1_0543 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_1429 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_0059 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PMPD1_1423 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PMPD1_0513 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PMPD1_0058 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PMPD1_1424 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PMPD1_4316 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMPD1_1163 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMPD1_4034 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMPD1_0572 Glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D PMPD1_2150 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMPD1_2373 UDP-glucuronate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PMPD1_1833 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMPD1_2144 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMPD1_3173 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_2375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2840 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2374 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMPD1_1477 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMPD1_1478 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PMPD1_2839 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMPD1_2421 PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMPD1_2422 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D PMPD1_2423 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D PMPD1_2846 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PMPD1_2847 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PMPD1_0295 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PMPD1_4264 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:pmak00541]
D PMPD1_4315 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMPD1_0489 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PMPD1_2013 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PMPD1_0488 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PMPD1_1663 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PMPD1_2833 UDP-N-acetylglucosamine 2-epimerase K24257 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D PMPD1_1325 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D PMPD1_2835 N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D PMPD1_2834 3-deoxy-manno-octulosonate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D PMPD1_4267 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PMPD1_4266 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PMPD1_1007 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMPD1_0977 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PMPD1_3808 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PMPD1_4144 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PMPD1_2375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2840 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMPD1_2374 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMPD1_4264 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMPD1_4265 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PMPD1_4262 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D PMPD1_4263 dTDP-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D PMPD1_2847 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pmak00511]
D PMPD1_1148 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PMPD1_0543 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_1429 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:pmak00540]
D PMPD1_0957 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMPD1_0873 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMPD1_0955 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMPD1_1281 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PMPD1_0958 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMPD1_1660 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PMPD1_4156 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PMPD1_1788 Lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PMPD1_2542 lauroyl-Kdo2-lipid IVA myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PMPD1_2924 Kdo2-lipid A phosphotransferase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D PMPD1_2107 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PMPD1_0127 KDO II ethanolaminephosphotransferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D PMPD1_1390 lipid IVA palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D PMPD1_0430 Lipid A biosynthesis palmitoleoyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D PMPD1_4146 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PMPD1_4145 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PMPD1_4153 Lipopolysaccharide core heptose(I) kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D PMPD1_3875 Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PMPD1_4155 Lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D PMPD1_4150 heptose II phosphotransferase K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D PMPD1_4154 Glucosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4152 UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4149 UDP-galactose:(Galactosyl) LPS alpha-1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4148 Beta-1,4-galactosyltransferase K23067 waaX; beta-1,4-galactosyltransferase
D PMPD1_4151 UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
D PMPD1_2831 Glycosyltransferase family 52 K24623 waaH; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4147 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pmak00542]
D PMPD1_2838 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4269 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:pmak00550]
D PMPD1_0497 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMPD1_4085 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMPD1_0868 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMPD1_0865 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMPD1_0862 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMPD1_0869 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMPD1_0863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMPD1_0950 Ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMPD1_3813 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMPD1_1606 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMPD1_0864 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMPD1_0867 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMPD1_0479 Biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_0320 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMPD1_0929 bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMPD1_0866 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_1400 Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_1401 Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMPD1_3762 Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMPD1_0861 Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_3590 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_1398 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_1604 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_2801 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_0506 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pmak00552]
D PMPD1_3813 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMPD1_1606 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMPD1_2838 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4269 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_0646 teichoic acid glycerol-phosphate transferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D PMPD1_2838 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4269 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:pmak00543]
D PMPD1_2845 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D PMPD1_2838 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4269 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4258 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D PMPD1_4260 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D PMPD1_4133 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pmak00730]
D PMPD1_2878 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PMPD1_4063 sulfur carrier protein ThiS adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D PMPD1_3312 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMPD1_1193 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMPD1_4066 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PMPD1_1190 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMPD1_4065 Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PMPD1_2879 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PMPD1_4062 Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PMPD1_1187 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PMPD1_3922 Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMPD1_1837 Thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D PMPD1_1257 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMPD1_0615 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PMPD1_2789 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pmak00740]
D PMPD1_2334 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMPD1_1184 Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMPD1_4247 Flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PMPD1_3806 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PMPD1_1185 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PMPD1_2093 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PMPD1_0806 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PMPD1_3036 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D PMPD1_4216 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D PMPD1_1680 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PMPD1_2879 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PMPD1_3796 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMPD1_1858 Phosphatase NudJ K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D PMPD1_3023 Flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pmak00750]
D PMPD1_2119 Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PMPD1_2121 Pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PMPD1_1312 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PMPD1_3639 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D PMPD1_3032 Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D PMPD1_1653 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMPD1_0822 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PMPD1_1928 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PMPD1_3333 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PMPD1_0795 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pmak00760]
D PMPD1_3343 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PMPD1_1470 Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PMPD1_0884 Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PMPD1_1676 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PMPD1_0764 Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMPD1_2765 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMPD1_0768 Transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PMPD1_1262 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMPD1_2627 SurE family 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMPD1_3500 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMPD1_1421 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PMPD1_1404 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PMPD1_3543 Nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMPD1_4060 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PMPD1_2042 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PMPD1_3440 nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PMPD1_0363 nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D PMPD1_1846 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PMPD1_3349 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PMPD1_4092 Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D PMPD1_2276 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PMPD1_2275 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PMPD1_1920 nicotinate dehydrogenase subunit A K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D PMPD1_1921 nicotinate dehydrogenase subunit B K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D PMPD1_1917 6-hydroxynicotinate 3-monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114]
D PMPD1_1918 2,5-dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D PMPD1_1916 Alpha/beta hydrolase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D PMPD1_1914 N-carbamoylsarcosine amidase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D PMPD1_1915 Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PMPD1_3491 maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D PMPD1_1709 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_3455 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMPD1_4178 Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pmak00770]
D PMPD1_0855 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_4283 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMPD1_0856 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMPD1_4282 Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMPD1_4277 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMPD1_4280 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMPD1_0921 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PMPD1_1195 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PMPD1_2666 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PMPD1_0920 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PMPD1_4083 Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PMPD1_4162 Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PMPD1_3543 Nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMPD1_4157 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PMPD1_0879 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PMPD1_3332 Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PMPD1_1175 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PMPD1_4281 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMPD1_0919 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pmak00780]
D PMPD1_1497 malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PMPD1_1770 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMPD1_3049 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMPD1_1773 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMPD1_1827 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMPD1_0524 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1772 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1825 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2186 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2763 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_4170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_0956 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMPD1_2316 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMPD1_0307 Pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PMPD1_1496 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMPD1_1494 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMPD1_1498 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMPD1_2157 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMPD1_1495 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PMPD1_4084 Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PMPD1_3591 molybdopterin-dependent oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:pmak00785]
D PMPD1_1396 lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PMPD1_1395 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_0889 Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMPD1_0890 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMPD1_1453 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PMPD1_1454 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMPD1_3621 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMPD1_3623 glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMPD1_3622 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pmak00790]
D PMPD1_2904 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PMPD1_2551 dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D PMPD1_3814 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PMPD1_0922 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PMPD1_0512 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PMPD1_0818 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMPD1_3027 Dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PMPD1_2334 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMPD1_0340 aminodeoxychorismate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PMPD1_2416 Aminodeoxychorismate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PMPD1_1828 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PMPD1_3521 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMPD1_3537 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMPD1_1214 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMPD1_3552 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMPD1_1502 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PMPD1_1504 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PMPD1_1506 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PMPD1_0800 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMPD1_1503 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMPD1_1579 Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PMPD1_1922 molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D PMPD1_4207 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pmak00670]
D PMPD1_0818 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMPD1_1285 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PMPD1_3320 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMPD1_3264 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMPD1_4053 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMPD1_3623 glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PMPD1_4046 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PMPD1_3580 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMPD1_2379 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PMPD1_4100 Methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PMPD1_3629 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PMPD1_3649 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMPD1_3621 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_3622 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PMPD1_2129 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D PMPD1_2128 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pmak00860]
D PMPD1_3184 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMPD1_2008 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PMPD1_0934 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMPD1_0232 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMPD1_4254 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PMPD1_4255 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PMPD1_4059 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PMPD1_3210 Oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PMPD1_4200 Coproporphyrinogen-III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PMPD1_4210 menaquinone-dependent protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D PMPD1_1258 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PMPD1_4256 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PMPD1_0332 Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PMPD1_3515 uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D PMPD1_1198 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMPD1_2341 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PMPD1_0381 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pmak00130]
D PMPD1_4023 Chorismate pyruvate-lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PMPD1_4022 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMPD1_4217 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PMPD1_3023 Flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PMPD1_3624 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PMPD1_0528 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D PMPD1_0527 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D PMPD1_0529 SCP2 domain-containing protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT
D PMPD1_2970 bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PMPD1_3625 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PMPD1_4225 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PMPD1_1418 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PMPD1_2983 isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PMPD1_2982 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PMPD1_2981 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D PMPD1_2979 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PMPD1_2978 O-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PMPD1_2980 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PMPD1_2080 Thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PMPD1_4113 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PMPD1_1711 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PMPD1_2249 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pmak00900]
D PMPD1_1190 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMPD1_0949 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PMPD1_3506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PMPD1_2006 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PMPD1_3505 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PMPD1_3297 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PMPD1_0810 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PMPD1_3023 Flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PMPD1_1533 Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PMPD1_1191 farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PMPD1_0499 Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PMPD1_0950 Ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:pmak00907]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_0903 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PMPD1_3009 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3010 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3219 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3467 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3468 Transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMPD1_3641 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pmak00523]
D PMPD1_4264 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMPD1_4265 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:pmak01053]
D PMPD1_2983 isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PMPD1_2951 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
C 01055 Biosynthesis of vancomycin group antibiotics
D PMPD1_4265 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pmak00946]
D PMPD1_1529 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pmak00332]
D PMPD1_1016 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMPD1_1017 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pmak00261]
D PMPD1_3513 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PMPD1_3514 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PMPD1_4036 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMPD1_0793 Bifunctional aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMPD1_4101 Bifunctional aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D PMPD1_0292 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMPD1_1090 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMPD1_3253 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMPD1_0812 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pmak00521]
D PMPD1_3173 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D PMPD1_1435 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PMPD1_3315 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMPD1_4264 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMPD1_4265 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PMPD1_3173 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pmak00525]
D PMPD1_4264 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PMPD1_4265 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pmak00401]
D PMPD1_3422 bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_2820 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMPD1_4010 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PMPD1_2346 Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMPD1_2347 Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PMPD1_1824 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMPD1_0524 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1772 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1825 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2186 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2763 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_4170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2316 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PMPD1_1760 acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1761 Acyl carrier protein K02078 acpP; acyl carrier protein
D PMPD1_1826 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pmak00999]
D PMPD1_3649 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMPD1_0422 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PMPD1_1529 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pmak00362]
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_0431 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PMPD1_3307 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3494
C 00627 Aminobenzoate degradation [PATH:pmak00627]
D PMPD1_0234 Glutamyl-tRNA amidotransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_1938 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_1704 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PMPD1_3023 Flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:pmak00364]
D PMPD1_4228 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:pmak00625]
D PMPD1_1029 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMPD1_0173 Betaine aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PMPD1_3158 Alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:pmak00361]
D PMPD1_4228 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PMPD1_3158 Alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:pmak00623]
D PMPD1_4228 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D PMPD1_0431 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:pmak00633]
D PMPD1_1611 Oxygen-insensitive NADPH nitroreductase K10678 nfsA; nitroreductase [EC:1.-.-.-]
D PMPD1_2105 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:pmak00643]
D PMPD1_0234 Glutamyl-tRNA amidotransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_1938 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PMPD1_2589 CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation [PATH:pmak00791]
D PMPD1_0784 Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D PMPD1_0236 isochorismatase family protein K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D PMPD1_0783 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation [PATH:pmak00930]
D PMPD1_4214 fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D PMPD1_3059 Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D PMPD1_0431 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:pmak00626]
D PMPD1_1029 Alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D PMPD1_2907 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PMPD1_2370 Aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:pmak00984]
D PMPD1_3060 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PMPD1_4215 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pmak03020]
D PMPD1_4074 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMPD1_4073 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMPD1_0408 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMPD1_4182 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pmak03010]
D PMPD1_R003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R089 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R098 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R103 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R114 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R087 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R101 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R112 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R067 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R086 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R094 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R111 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_1656 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PMPD1_0945 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PMPD1_0390 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PMPD1_0407 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PMPD1_0401 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PMPD1_0377 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PMPD1_0398 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PMPD1_0471 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PMPD1_0383 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PMPD1_0406 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PMPD1_0376 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PMPD1_0405 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PMPD1_0397 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PMPD1_3427 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PMPD1_0393 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PMPD1_3899 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PMPD1_0388 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PMPD1_0805 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PMPD1_3818 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PMPD1_4077 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PMPD1_0387 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PMPD1_0384 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PMPD1_0385 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PMPD1_0396 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PMPD1_0399 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PMPD1_3898 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PMPD1_4076 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PMPD1_4078 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PMPD1_4075 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMPD1_0470 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PMPD1_0394 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PMPD1_0403 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PMPD1_0391 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PMPD1_0409 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PMPD1_0400 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PMPD1_3424 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PMPD1_2059 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PMPD1_0500 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PMPD1_0389 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PMPD1_0386 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PMPD1_0395 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PMPD1_2936 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PMPD1_0501 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PMPD1_4160 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PMPD1_0392 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PMPD1_0402 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PMPD1_1243 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PMPD1_4107 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PMPD1_1821 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PMPD1_4159 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PMPD1_4354 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PMPD1_2058 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PMPD1_1242 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pmak00970]
D PMPD1_R005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R096 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R027 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R073 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R107 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMPD1_R053 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMPD1_R054 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMPD1_R024 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMPD1_R025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMPD1_R110 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMPD1_R043 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PMPD1_R030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R033 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R034 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R069 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R088 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R102 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R113 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R082 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R083 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R084 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R091 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R106 tRNA-His K14226 tRNA-His; tRNA His
D PMPD1_R004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMPD1_R020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMPD1_R097 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMPD1_R011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R028 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R037 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R064 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R012 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R032 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R036 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R075 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R076 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R079 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R078 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMPD1_R085 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMPD1_R002 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMPD1_R055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMPD1_R104 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMPD1_R040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R074 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R026 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R058 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R093 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R109 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PMPD1_R048 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMPD1_R092 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMPD1_R045 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R046 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R047 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R061 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R062 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R063 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R001 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PMPD1_3184 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMPD1_1886 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PMPD1_1426 Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMPD1_3437 Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMPD1_2552 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMPD1_1675 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMPD1_0080 Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMPD1_0081 Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMPD1_2056 Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMPD1_1647 Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMPD1_0097 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMPD1_3868 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMPD1_1283 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMPD1_2891 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMPD1_0416 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMPD1_0554 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMPD1_1407 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMPD1_0807 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMPD1_3607 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMPD1_2566 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMPD1_0971 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMPD1_3296 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMPD1_2060 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMPD1_2061 Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMPD1_2120 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMPD1_0331 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:pmak03008]
D PMPD1_3336 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMPD1_3921 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pmak03060]
D PMPD1_0404 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMPD1_4080 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMPD1_0514 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PMPD1_1179 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PMPD1_1180 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PMPD1_1178 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMPD1_4351 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMPD1_0875 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMPD1_4135 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PMPD1_0874 Secretion monitor precursor protein K13301 secM; secretion monitor
D PMPD1_3428 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMPD1_0253 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PMPD1_4222 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PMPD1_4221 Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D PMPD1_4220 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PMPD1_1394 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE
D PMPD1_3337 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMPD1_0808 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pmak04122]
D PMPD1_3312 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMPD1_3303 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PMPD1_0247 Sulfur carrier protein TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PMPD1_0375 sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PMPD1_0374 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PMPD1_0373 sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PMPD1_1705 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PMPD1_1857 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMPD1_1506 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PMPD1_1502 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PMPD1_1505 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D PMPD1_1578 Molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PMPD1_1504 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PMPD1_0800 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMPD1_1503 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMPD1_1193 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMPD1_4064 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D PMPD1_4063 sulfur carrier protein ThiS adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pmak03018]
D PMPD1_3583 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PMPD1_1817 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMPD1_4273 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PMPD1_3541 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4319 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_0521 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMPD1_1513 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PMPD1_3907 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMPD1_0523 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMPD1_4239 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMPD1_4270 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_0802 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PMPD1_3938 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMPD1_3914 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMPD1_3268 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PMPD1_0923 Poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pmak03030]
D PMPD1_2519 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_2529 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_3143 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_0987 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMPD1_0960 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMPD1_1250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMPD1_1831 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMPD1_1405 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMPD1_0698 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMPD1_0555 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMPD1_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMPD1_3113 Helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMPD1_4011 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMPD1_3819 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMPD1_4005 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_4434 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_0986 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMPD1_0959 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMPD1_4203 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMPD1_3189 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4180 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pmak03410]
D PMPD1_2130 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMPD1_3347 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PMPD1_3667 Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PMPD1_4158 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMPD1_1447 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PMPD1_1468 Putative DNA-3-methyladenine glycosidase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PMPD1_0044 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PMPD1_3821 G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D PMPD1_2380 Exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PMPD1_2915 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PMPD1_4203 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMPD1_3609 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMPD1_3189 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4180 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pmak03420]
D PMPD1_1842 Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMPD1_4006 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PMPD1_1500 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMPD1_1720 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PMPD1_4246 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMPD1_4203 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMPD1_3189 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4180 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pmak03430]
D PMPD1_3496 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PMPD1_3916 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PMPD1_3584 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D PMPD1_4246 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMPD1_2808 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PMPD1_3289 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PMPD1_1192 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PMPD1_2530 Exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D PMPD1_3609 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMPD1_4005 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_4434 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_0960 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMPD1_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMPD1_1250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMPD1_1405 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMPD1_1831 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMPD1_0987 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMPD1_2519 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_2529 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_3143 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_0555 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMPD1_0698 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMPD1_3189 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4180 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_0328 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pmak03440]
D PMPD1_3609 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMPD1_4005 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_4434 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PMPD1_3334 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PMPD1_1252 Recombination protein RecR K06187 recR; recombination protein RecR
D PMPD1_2449 recombinase RecA K03553 recA; recombination protein RecA
D PMPD1_3439 recombinase RecA K03553 recA; recombination protein RecA
D PMPD1_4203 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMPD1_2548 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PMPD1_2547 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMPD1_2549 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMPD1_4185 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMPD1_3567 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMPD1_3569 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMPD1_3566 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMPD1_0960 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMPD1_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMPD1_1250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMPD1_1405 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMPD1_1831 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMPD1_0987 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMPD1_2519 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_2529 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_3143 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_0555 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMPD1_0698 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMPD1_4108 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMPD1_3900 Primosomal replication protein N K02686 priB; primosomal replication protein N
D PMPD1_1248 Prephenate dehydrogenase K04067 priC; primosomal replication protein N''
D PMPD1_0049 Primosomal protein I K02317 dnaT; DNA replication protein DnaT
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pmak03250]
D PMPD1_0337 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pmak02010]
D PMPD1_3204 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PMPD1_4124 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PMPD1_3203 sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PMPD1_3202 sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PMPD1_3201 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PMPD1_2594 ABC transporter substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D PMPD1_2595 ABC transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein
D PMPD1_0357 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D PMPD1_0359 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D PMPD1_0358 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PMPD1_1003 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1939 NitT/TauT family transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1942 sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1952 Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_2207 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_3180 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1679 Alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1940 NitT/TauT family transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1948 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1949 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1678 Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PMPD1_1947 Alkanesulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PMPD1_2792 putative hydroxymethylpyrimidine transport system substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PMPD1_2791 putative hydroxymethylpyrimidine transport system permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PMPD1_2790 putative hydroxymethylpyrimidine transport system ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PMPD1_1486 molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMPD1_3421 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMPD1_1487 molybdate transport system permease protein K02018 modB; molybdate transport system permease protein
D PMPD1_1488 molybdate transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMPD1_1480 Molybdenum ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D PMPD1_0243 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMPD1_0242 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D PMPD1_0244 Ferric iron ABC transporter, substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMPD1_0848 thiamine transport system substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D PMPD1_0847 thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D PMPD1_0846 thiamine transport system ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PMPD1_1847 spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMPD1_1848 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D PMPD1_1849 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D PMPD1_1850 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PMPD1_1614 putrescine transport system substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PMPD1_1617 putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D PMPD1_1616 putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D PMPD1_1615 putrescine transport system ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PMPD1_3400 glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PMPD1_3399 glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D PMPD1_3398 glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_0258 L-proline glycine betaine binding ABC transporter protein ProX K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_1318 ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_1535 Osmoprotectant ABC transporter binding protein YehZ K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_2160 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_0259 Glycine betaine ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_0260 L-proline glycine betaine ABC transport system permease protein ProW K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1320 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1321 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1536 Osmoprotectant ABC transporter permease protein YehY K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1538 Osmoprotectant ABC transporter inner membrane protein YehW K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_2159 osmoprotectant ABC transporter permease OsmW K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_2161 osmoprotectant ABC transporter permease OsmY K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_0261 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_1322 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_1537 Osmoprotectant ABC transporter ATP-binding subunit YehX K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_2158 osmoprotectant ABC transporter ATP-binding protein OsmV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_4027 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D PMPD1_4028 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D PMPD1_4029 maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D PMPD1_1228 multiple sugar transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_1331 multiple sugar transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_4026 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_1079 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_3971 multiple sugar transport system ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_1231 sorbitol/mannitol transport system substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D PMPD1_1230 sorbitol/mannitol transport system permease protein K10228 smoF; polyol transport system permease protein
D PMPD1_1229 sorbitol/mannitol transport system permease protein K10229 smoG; polyol transport system permease protein
D PMPD1_0494 phospholipid transport system substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PMPD1_0493 phospholipid transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMPD1_0492 phospholipid transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMPD1_0495 phospholipid transport system transporter-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PMPD1_0491 phospholipid transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMPD1_0348 putative nucleoside ABC transporter substrate-binding component K07335 bmpA; basic membrane protein A and related proteins
D PMPD1_0350 Putative deoxyribose-specific ABC transporter permease protein K23535 nupB; general nucleoside transport system permease protein
D PMPD1_0351 Putative deoxyribose-specific ABC transporter permease protein K23536 nupC; general nucleoside transport system permease protein
D PMPD1_0349 Putative deoxyribose-specific ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PMPD1_0573 ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_0618 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_2713 ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_4291 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_0575 ribose transport system permease protein K10440 rbsC; ribose transport system permease protein
D PMPD1_0621 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D PMPD1_2714 ribose transport system permease protein K10440 rbsC; ribose transport system permease protein
D PMPD1_4292 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D PMPD1_0574 ribose transport system ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_0620 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_2715 ribose transport system ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_4293 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_4294 Ribose ABC transport system, high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PMPD1_2901 methyl-galactoside transport system substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PMPD1_2899 methyl-galactoside transport system permease protein K10541 mglC; methyl-galactoside transport system permease protein
D PMPD1_2900 methyl-galactoside transport system ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D PMPD1_0074 fructose transport system substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein
D PMPD1_0073 fructose transport system permease protein K10553 frcC; fructose transport system permease protein
D PMPD1_0072 fructose transport system ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D PMPD1_3465 ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D PMPD1_3462 erythritol transport system permease protein K17203 eryF; erythritol transport system permease protein
D PMPD1_3463 erythritol transport system ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D PMPD1_0278 sn-glycerol 3-phosphate transport system substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PMPD1_0279 sn-glycerol 3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PMPD1_0280 sn-glycerol 3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PMPD1_0281 sn-glycerol 3-phosphate transport system ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PMPD1_1170 Phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PMPD1_4332 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PMPD1_3267 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D PMPD1_4333 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PMPD1_3266 phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PMPD1_4334 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PMPD1_3265 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMPD1_4335 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMPD1_2722 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D PMPD1_2720 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D PMPD1_2721 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D PMPD1_2723 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PMPD1_2261 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D PMPD1_3959 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D PMPD1_3020 Histidine ABC transporter, permease protein HisM K10015 hisM; histidine transport system permease protein
D PMPD1_3021 Histidine ABC transporter, permease protein HisQ K10016 hisQ; histidine transport system permease protein
D PMPD1_3019 Histidine ABC transporter, ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_3022 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ K10014 hisJ; histidine transport system substrate-binding protein
D PMPD1_1564 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D PMPD1_1563 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein
D PMPD1_1562 glutamine ABC transporter ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1621 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D PMPD1_1619 arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein
D PMPD1_1620 arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein
D PMPD1_1622 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_0904 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMPD1_1412 glutamate/aspartate transport system substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMPD1_1410 glutamate/aspartate transport system permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D PMPD1_1411 glutamate/aspartate transport system permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D PMPD1_1409 glutamate/aspartate transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1554 Histidine ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D PMPD1_1556 Histidine ABC transporter, permease protein HisM K10019 occM; octopine/nopaline transport system permease protein
D PMPD1_1555 Histidine ABC transporter, permease protein HisQ K10020 occQ; octopine/nopaline transport system permease protein
D PMPD1_1557 Histidine ABC transporter, ATP-binding protein HisP K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_0429 general L-amino acid transport system substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PMPD1_0428 general L-amino acid transport system permease protein K09970 aapQ; general L-amino acid transport system permease protein
D PMPD1_0427 general L-amino acid transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D PMPD1_0426 general L-amino acid transport system ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_2610 Cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PMPD1_2609 cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PMPD1_2608 L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_0268 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PMPD1_0269 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PMPD1_0270 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PMPD1_0271 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PMPD1_0272 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PMPD1_0974 D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PMPD1_2215 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PMPD1_3387 D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PMPD1_0975 D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PMPD1_2216 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D PMPD1_3388 D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PMPD1_0976 D-methionine transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMPD1_2217 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMPD1_3389 D-methionine transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMPD1_0781 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D PMPD1_0780 urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D PMPD1_0779 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D PMPD1_0778 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D PMPD1_0777 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D PMPD1_1499 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D PMPD1_2299 Oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2367 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2368 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2366 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D PMPD1_2365 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D PMPD1_2364 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PMPD1_2363 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PMPD1_0134 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_2259 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_3745 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_0135 Dipeptide transport system permease protein DppB K12369 dppB; dipeptide transport system permease protein
D PMPD1_0136 Dipeptide transport system permease protein DppC K12370 dppC; dipeptide transport system permease protein
D PMPD1_0137 Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D PMPD1_0138 Dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D PMPD1_2311 cationic peptide transport system substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMPD1_2312 cationic peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D PMPD1_2313 cationic peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D PMPD1_2314 cationic peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PMPD1_2315 cationic peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PMPD1_1582 glutathione transport system substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PMPD1_2239 peptide/nickel transport system substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PMPD1_1583 glutathione transport system permease protein K13890 gsiC; glutathione transport system permease protein
D PMPD1_2238 peptide/nickel transport system permease protein K13890 gsiC; glutathione transport system permease protein
D PMPD1_1584 glutathione transport system permease protein K13891 gsiD; glutathione transport system permease protein
D PMPD1_1581 glutathione transport system ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D PMPD1_2928 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PMPD1_2929 Microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein
D PMPD1_2930 Microcin ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PMPD1_2931 Microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PMPD1_0054 iron complex transport system substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PMPD1_0932 Ferric hydroxamate ABC transporter, periplasmic substrate binding protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PMPD1_0053 iron complex transport system permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D PMPD1_0933 Ferric hydroxamate ABC transporter, permease component FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PMPD1_0931 Ferric hydroxamate ABC transporter, ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PMPD1_0937 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D PMPD1_2063 Vitamin B12 import system permease protein BtuC K06073 btuC; vitamin B12 transport system permease protein
D PMPD1_2065 Vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D PMPD1_2544 zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D PMPD1_2546 zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D PMPD1_2545 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PMPD1_1843 lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D PMPD1_1845 lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein
D PMPD1_1844 lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PMPD1_3069 Heme exporter protein D K02196 ccmD; heme exporter protein D
D PMPD1_3070 Heme exporter protein C K02195 ccmC; heme exporter protein C
D PMPD1_3071 Heme exporter protein B K02194 ccmB; heme exporter protein B
D PMPD1_3072 cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PMPD1_0557 lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D PMPD1_0558 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PMPD1_0485 lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMPD1_0255 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PMPD1_0254 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PMPD1_1659 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PMPD1_1219 Multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMPD1_1220 Multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMPD1_1103 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D PMPD1_0183 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMPD1_2962 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PMPD1_3863 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PMPD1_1640 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PMPD1_1641 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PMPD1_3199 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PMPD1_2953 Multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D PMPD1_0052 putative ATP-binding cassette transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pmak02060]
D PMPD1_3194 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PMPD1_3193 Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PMPD1_3195 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMPD1_1833 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMPD1_1425 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMPD1_2144 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMPD1_2626 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PMPD1_3618 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PMPD1_1483 PTS system, trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PMPD1_3978 PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PMPD1_1124 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D PMPD1_0116 PTS system, mannitol-specific enzyme IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMPD1_1128 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMPD1_0539 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMPD1_1134 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMPD1_0538 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMPD1_1132 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMPD1_0541 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PMPD1_1133 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PMPD1_2421 PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMPD1_2422 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D PMPD1_2423 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D PMPD1_1095 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PMPD1_1096 PTS system, glucitol/sorbitol-specific IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PMPD1_1094 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D PMPD1_0230 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PMPD1_0228 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PMPD1_0229 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D PMPD1_3013 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMPD1_3012 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMPD1_3011 PTS system, ascorbate-specific IIC component K03475 ulaA; ascorbate PTS system EIIC component
D PMPD1_2918 phosphocarrier protein FPr K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D PMPD1_2916 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PMPD1_2917 Phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PMPD1_3582 Phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PMPD1_0480 PTS phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D PMPD1_0482 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pmak03070]
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_1380 hypothetical protein K04056 yscO; type III secretion protein O
D PMPD1_1371 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C
D PMPD1_1384 type III secretion protein W K04058 yscW; type III secretion protein W
D PMPD1_1367 type III secretion protein J K03222 yscJ; type III secretion protein J
D PMPD1_1377 type III secretion protein R K03226 yscR; type III secretion protein R
D PMPD1_1376 type III secretion protein S K03227 yscS; type III secretion protein S
D PMPD1_1375 type III secretion protein T K03228 yscT; type III secretion protein T
D PMPD1_1374 type III secretion protein U K03229 yscU; type III secretion protein U
D PMPD1_1383 type III secretion protein V K03230 yscV; type III secretion protein V
D PMPD1_1381 Type III secretion cytoplasmic ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D PMPD1_1378 type III secretion protein Q K03225 yscQ; type III secretion protein Q
D PMPD1_1369 HrpE/YscL family type III secretion apparatus protein K03223 yscL; type III secretion protein L
D PMPD1_1179 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PMPD1_1180 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PMPD1_4080 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMPD1_0514 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PMPD1_0404 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMPD1_1178 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMPD1_4351 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMPD1_0875 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMPD1_0874 Secretion monitor precursor protein K13301 secM; secretion monitor
D PMPD1_0253 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PMPD1_4135 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PMPD1_3428 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMPD1_4222 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PMPD1_4221 Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D PMPD1_4220 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PMPD1_1394 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE
D PMPD1_0262 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0273 type VI secretion system secreted protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0729 Type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0829 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_1528 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_2749 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0090 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0108 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0710 type VI secretion system secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0713 type VI secretion system secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_1587 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_1601 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_1866 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2224 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2445 Type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2696 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2756 type VI secretion system secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_3645 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_4067 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0702 type VI secretion system protein VasD K11906 vasD; type VI secretion system protein VasD
D PMPD1_2739 type VI secretion system protein VasD K11906 vasD; type VI secretion system protein VasD
D PMPD1_0705 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PMPD1_2022 type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D PMPD1_2743 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PMPD1_0704 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PMPD1_2023 OmpA family protein K11892 impK; type VI secretion system protein ImpK
D PMPD1_2758 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PMPD1_0727 type VI secretion system protein VasG K11907 vasG; type VI secretion system protein VasG
D PMPD1_2755 type VI secretion system protein VasG K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pmak02020]
D PMPD1_1169 phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMPD1_1168 phosphate response regulator transcription factor PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMPD1_1170 Phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PMPD1_4332 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PMPD1_1853 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMPD1_1854 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMPD1_3036 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D PMPD1_0314 Two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PMPD1_0313 Transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PMPD1_2960 Outer membrane porin OmpC K09475 ompC; outer membrane pore protein C
D PMPD1_1674 Porin OmpC K09476 ompF; outer membrane pore protein F
D PMPD1_4131 envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMPD1_4130 envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMPD1_3846 EnvZ/OmpR regulon moderator MzrA K25864 mzrA; modulator protein MzrA
D PMPD1_2281 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PMPD1_2280 two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D PMPD1_0940 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D PMPD1_2867 two-component system sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PMPD1_2868 two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D PMPD1_2863 Multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D PMPD1_2864 Multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump
D PMPD1_2865 Multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump
D PMPD1_2866 MFS transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_3245 Efflux pump membrane transporter K18324 acrD; multidrug efflux pump
D PMPD1_0504 two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D PMPD1_0505 two-component system response regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D PMPD1_2694 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D PMPD1_2693 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PMPD1_2692 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D PMPD1_2581 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D PMPD1_2580 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D PMPD1_0672 flagellin K02406 fliC; flagellin
D PMPD1_2615 Flagellin K02406 fliC; flagellin
D PMPD1_0678 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_2613 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_0679 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_2579 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_1974 Two-component system sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PMPD1_1975 two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PMPD1_1971 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PMPD1_1972 potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PMPD1_1973 potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PMPD1_2887 Trimethylamine N-oxide reductase I cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PMPD1_0477 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMPD1_0791 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PMPD1_4323 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PMPD1_4324 Tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMPD1_4322 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PMPD1_0001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PMPD1_3574 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMPD1_2895 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PMPD1_3171 Sensor histidine kinase K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3]
D PMPD1_3172 LytTR family transcriptional regulator K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator
D PMPD1_3164 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PMPD1_3239 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PMPD1_3240 two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PMPD1_3243 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PMPD1_3244 DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PMPD1_3237 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3236 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3234 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3235 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D PMPD1_3501 Formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D PMPD1_3502 Formate dehydrogenase N beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D PMPD1_3503 Formate dehydrogenase N gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D PMPD1_3926 fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMPD1_3927 fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMPD1_3928 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMPD1_3929 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMPD1_0093 Hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMPD1_0094 Sensor histidine protein kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PMPD1_0095 Transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PMPD1_0092 Hexose phosphate transport protein UhpT K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D PMPD1_0973 Outer membrane lipoprotein RcsF K06080 rcsF; RcsF protein
D PMPD1_2966 Phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D PMPD1_2647 Transcriptional regulatory protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D PMPD1_1106 response regulator transcription factor K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PMPD1_2967 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PMPD1_3546 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PMPD1_1719 Two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PMPD1_3436 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D PMPD1_3934 Histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PMPD1_3933 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D PMPD1_2103 class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PMPD1_0212 Pilus assembly protein PapC K07347 fimD; outer membrane usher protein
D PMPD1_3936 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_4347 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_3535 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PMPD1_3709 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PMPD1_3711 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PMPD1_3532 Type II/IV secretion system secretin K02280 cpaC; pilus assembly protein CpaC
D PMPD1_3712 secretin K02280 cpaC; pilus assembly protein CpaC
D PMPD1_3530 Type II/IV secretion system ATPase K02282 cpaE; pilus assembly protein CpaE
D PMPD1_3714 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PMPD1_3529 Type II/IV secretion system ATP hydrolase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMPD1_3715 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMPD1_3528 Flp pilus assembly protein K12510 tadB; tight adherence protein B
D PMPD1_3716 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PMPD1_3527 type II secretion system F family protein K12511 tadC; tight adherence protein C
D PMPD1_3717 Type II/IV secretion system protein TadC K12511 tadC; tight adherence protein C
D PMPD1_0943 bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PMPD1_3322 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D PMPD1_4197 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PMPD1_4198 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PMPD1_4196 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMPD1_0147 aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D PMPD1_0484 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PMPD1_3325 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMPD1_3323 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PMPD1_2573 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PMPD1_1360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_1532 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_2264 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_1063 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_2575 Methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_3881 Methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_2648 Methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D PMPD1_2574 Methyl-accepting chemotaxis protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D PMPD1_3977 Aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D PMPD1_2576 Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D PMPD1_2577 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMPD1_2571 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMPD1_2572 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMPD1_3778 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D PMPD1_3779 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D PMPD1_3780 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D PMPD1_1409 glutamate/aspartate transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1410 glutamate/aspartate transport system permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D PMPD1_1411 glutamate/aspartate transport system permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D PMPD1_0904 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMPD1_1412 glutamate/aspartate transport system substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMPD1_0343 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMPD1_2326 Enoyl-CoA hydratase K13816 rpfF; DSF synthase
D PMPD1_1457 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMPD1_2030 Cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMPD1_1458 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMPD1_2029 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_2854 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PMPD1_2853 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PMPD1_2852 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PMPD1_4267 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PMPD1_4266 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D PMPD1_1716 Acyl-homoserine-lactone synthase K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PMPD1_0656 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMPD1_1804 Flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
D PMPD1_0543 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_1429 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 04146 Peroxisome [PATH:pmak04146]
D PMPD1_2410 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PMPD1_4060 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PMPD1_1069 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D PMPD1_2704 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D PMPD1_1861 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMPD1_0688 catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_2045 Catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_2977 Catalase K03781 katE; catalase [EC:1.11.1.6]
D PMPD1_1777 Superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
D PMPD1_0107 Manganese superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PMPD1_3673 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pmak02024]
D PMPD1_3431 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PMPD1_3914 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMPD1_2346 Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMPD1_2347 Anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PMPD1_1716 Acyl-homoserine-lactone synthase K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PMPD1_1474 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMPD1_2075 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMPD1_3423 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMPD1_3325 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMPD1_3323 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PMPD1_2581 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D PMPD1_2580 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D PMPD1_1975 two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PMPD1_2972 Autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D PMPD1_2971 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D PMPD1_4044 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PMPD1_4041 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PMPD1_4042 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PMPD1_4040 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PMPD1_0268 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PMPD1_0269 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PMPD1_0270 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PMPD1_0271 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PMPD1_0272 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PMPD1_1072 Acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D PMPD1_1073 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D PMPD1_2647 Transcriptional regulatory protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D PMPD1_2326 Enoyl-CoA hydratase K13816 rpfF; DSF synthase
D PMPD1_2325 cyclic di-GMP phosphodiesterase K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D PMPD1_2410 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PMPD1_0343 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMPD1_4015 Zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PMPD1_2334 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMPD1_1184 Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMPD1_1756 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PMPD1_2299 Oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2367 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2368 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2366 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D PMPD1_2365 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D PMPD1_2364 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PMPD1_2363 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PMPD1_0028 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMPD1_1953 peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMPD1_1961 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMPD1_0029 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMPD1_1954 peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMPD1_1962 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMPD1_0030 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_1955 peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_1963 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_2237 peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_0031 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_1956 peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_1964 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_2242 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_0032 Dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PMPD1_4351 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMPD1_4080 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMPD1_0514 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PMPD1_0404 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMPD1_1178 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMPD1_0875 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMPD1_0253 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PMPD1_4135 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PMPD1_3428 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pmak02030]
D PMPD1_1360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_1532 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_2264 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_1063 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_2575 Methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_3881 Methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_2648 Methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D PMPD1_2574 Methyl-accepting chemotaxis protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D PMPD1_3977 Aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D PMPD1_4027 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D PMPD1_0573 ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_0618 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_2713 ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_4291 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_2901 methyl-galactoside transport system substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PMPD1_0134 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_2259 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_3745 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_2577 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMPD1_2576 Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D PMPD1_2571 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMPD1_2570 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D PMPD1_2572 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMPD1_2573 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PMPD1_0639 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PMPD1_2635 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PMPD1_0635 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PMPD1_2641 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PMPD1_0634 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_2642 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_0679 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_2579 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_0680 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_2578 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:pmak02040]
D PMPD1_0637 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PMPD1_2633 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PMPD1_0638 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PMPD1_2634 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PMPD1_0639 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PMPD1_2635 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PMPD1_0640 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D PMPD1_2636 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D PMPD1_0641 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMPD1_2637 Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMPD1_2638 flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D PMPD1_0676 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PMPD1_2639 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D PMPD1_0677 Flagellar protein FliL K02415 fliL; flagellar protein FliL
D PMPD1_2640 Flagellar protein FliL K02415 fliL; flagellar protein FliL
D PMPD1_0635 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PMPD1_2641 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PMPD1_0634 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_2642 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_2643 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PMPD1_0633 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PMPD1_2644 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PMPD1_0632 Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PMPD1_2645 Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PMPD1_0631 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PMPD1_2646 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PMPD1_2567 Flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D PMPD1_0629 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PMPD1_2568 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PMPD1_0630 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PMPD1_2569 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PMPD1_0657 Flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PMPD1_1805 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PMPD1_0658 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PMPD1_1806 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PMPD1_0659 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PMPD1_1807 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PMPD1_0660 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D PMPD1_1808 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D PMPD1_0661 Flagellar basal body protein FlaE K02390 flgE; flagellar hook protein FlgE
D PMPD1_1809 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PMPD1_0662 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PMPD1_1810 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PMPD1_0663 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PMPD1_1811 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PMPD1_0664 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PMPD1_1812 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PMPD1_0665 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PMPD1_1813 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PMPD1_0666 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PMPD1_1814 flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PMPD1_0667 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PMPD1_1815 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PMPD1_0668 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PMPD1_1816 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PMPD1_0672 flagellin K02406 fliC; flagellin
D PMPD1_2615 Flagellin K02406 fliC; flagellin
D PMPD1_0673 Flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D PMPD1_2616 Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D PMPD1_0674 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D PMPD1_2617 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PMPD1_2618 flagellar protein FliT K02423 fliT; flagellar protein FliT
D PMPD1_0679 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_2579 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_0680 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_2578 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_0656 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMPD1_1804 Flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMPD1_0655 flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PMPD1_1803 Flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PMPD1_2610 Cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PMPD1_2612 flagella biosynthesis regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D PMPD1_3820 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PMPD1_2581 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D PMPD1_2580 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D PMPD1_0484 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PMPD1_0678 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_2613 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PMPD1_3541 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4319 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:pmak04981]
D PMPD1_3629 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PMPD1_0818 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMPD1_3320 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMPD1_3580 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMPD1_4046 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism
D PMPD1_4046 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D PMPD1_1319 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PMPD1_1547 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PMPD1_1558 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pmak01501]
D PMPD1_1674 Porin OmpC K09476 ompF; outer membrane pore protein F
D PMPD1_2960 Outer membrane porin OmpC K09475 ompC; outer membrane pore protein C
D PMPD1_1203 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PMPD1_1838 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PMPD1_2103 class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PMPD1_2299 Oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2367 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2368 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2366 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D PMPD1_2365 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D PMPD1_2364 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PMPD1_2363 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PMPD1_1245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PMPD1_1244 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PMPD1_1756 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_0320 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMPD1_1401 Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMPD1_3762 Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMPD1_0861 Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_3590 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pmak01502]
D PMPD1_3574 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMPD1_0869 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMPD1_2397 catabolic alanine racemase DadX K01775 alr; alanine racemase [EC:5.1.1.1]
D PMPD1_0863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMPD1_0864 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMPD1_0867 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pmak01503]
D PMPD1_1853 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMPD1_1854 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMPD1_0127 KDO II ethanolaminephosphotransferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D PMPD1_1390 lipid IVA palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D PMPD1_0504 two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D PMPD1_0505 two-component system response regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D PMPD1_2107 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PMPD1_2311 cationic peptide transport system substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMPD1_2312 cationic peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D PMPD1_2313 cationic peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D PMPD1_2314 cationic peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PMPD1_2315 cationic peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PMPD1_0970 Copper homeostasis protein CutF K06079 cutF; copper homeostasis protein (lipoprotein)
D PMPD1_4131 envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMPD1_4130 envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMPD1_3209 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_3564 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_3917 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_2088 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D PMPD1_0940 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D PMPD1_4204 Thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMPD1_0337 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMPD1_2231 Helix-turn-helix domain protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMPD1_1245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PMPD1_1244 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_0957 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pmak01000]
C 01001 Protein kinases [BR:pmak01001]
D PMPD1_1594 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PMPD1_2852 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PMPD1_1169 phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMPD1_1853 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMPD1_0314 Two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PMPD1_2281 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PMPD1_4131 envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMPD1_2867 two-component system sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PMPD1_0504 two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D PMPD1_1974 Two-component system sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PMPD1_0477 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMPD1_3196 Two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PMPD1_3239 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PMPD1_3243 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PMPD1_0094 Sensor histidine protein kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PMPD1_2966 Phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D PMPD1_3546 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PMPD1_3934 Histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PMPD1_3171 Sensor histidine kinase K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3]
D PMPD1_4197 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PMPD1_3325 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMPD1_2577 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pmak01009]
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PMPD1_0721 Serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PMPD1_2019 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PMPD1_0766 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pmak01002]
D PMPD1_0808 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PMPD1_3534 Type IV prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PMPD1_3710 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PMPD1_1446 Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D PMPD1_1911 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMPD1_3287 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMPD1_2814 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D PMPD1_1103 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D PMPD1_2926 Bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PMPD1_2100 Putative endopeptidase YdhO K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D PMPD1_2066 endopeptidase K13695 nlpC; probable lipoprotein NlpC
D PMPD1_3024 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMPD1_0476 Glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PMPD1_4316 glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMPD1_1420 asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PMPD1_0533 Protease K05520 yhbO; deglycase [EC:3.5.1.124]
D PMPD1_1194 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D PMPD1_1515 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS
D PMPD1_2088 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D PMPD1_1670 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D PMPD1_0198 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D PMPD1_1137 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D PMPD1_1677 Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMPD1_0199 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PMPD1_2167 Dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PMPD1_3574 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMPD1_3568 Pitrilysin K01407 ptrA; protease III [EC:3.4.24.55]
D PMPD1_0556 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMPD1_3305 Peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PMPD1_0222 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PMPD1_0624 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMPD1_3247 Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMPD1_1851 Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PMPD1_2260 Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PMPD1_1011 Aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PMPD1_1002 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D PMPD1_2543 Murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PMPD1_0944 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PMPD1_4213 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PMPD1_3626 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PMPD1_3516 aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D PMPD1_2282 Metal-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PMPD1_0511 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMPD1_2433 Protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PMPD1_3642 Metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-]
D PMPD1_3258 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PMPD1_0952 Zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PMPD1_3054 Penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PMPD1_2664 DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase
D PMPD1_2284 Serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D PMPD1_0940 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D PMPD1_0467 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D PMPD1_0466 outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PMPD1_2531 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PMPD1_1398 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_1604 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_2801 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_1523 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D PMPD1_3220 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D PMPD1_0506 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMPD1_1207 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMPD1_1209 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PMPD1_1691 Lon protease family protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D PMPD1_4018 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMPD1_2460 translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMPD1_2590 translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMPD1_4450 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMPD1_3337 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMPD1_2434 Carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PMPD1_2385 protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D PMPD1_2339 serine protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PMPD1_0300 GlpG protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PMPD1_1877 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PMPD1_4111 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PMPD1_1580 Isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PMPD1_0284 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PMPD1_0995 Putative gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D PMPD1_2869 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PMPD1_0527 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D PMPD1_0528 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D PMPD1_3877 Peptidase PmbA K03592 pmbA; PmbA protein
D PMPD1_0456 metalloprotease TldD K03568 tldD; TldD protein
D PMPD1_1336 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D PMPD1_3911 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D PMPD1_3912 FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pmak01003]
D PMPD1_0296 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PMPD1_0141 Cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D PMPD1_0479 Biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_0929 bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMPD1_0320 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMPD1_0866 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_1400 Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_4258 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D PMPD1_4260 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D PMPD1_2838 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4269 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_1784 Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D PMPD1_1986 Cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D PMPD1_2583 Trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D PMPD1_2652 Glycosyltransferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pmak01005]
D PMPD1_0957 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMPD1_0958 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMPD1_0873 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMPD1_0955 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMPD1_1281 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PMPD1_1660 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PMPD1_1788 Lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PMPD1_2542 lauroyl-Kdo2-lipid IVA myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PMPD1_0430 Lipid A biosynthesis palmitoleoyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D PMPD1_2924 Kdo2-lipid A phosphotransferase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D PMPD1_4156 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PMPD1_1390 lipid IVA palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D PMPD1_2107 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PMPD1_0127 KDO II ethanolaminephosphotransferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D PMPD1_2013 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PMPD1_1663 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PMPD1_0488 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PMPD1_0489 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PMPD1_4146 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PMPD1_4145 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PMPD1_4154 Glucosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PMPD1_2831 Glycosyltransferase family 52 K24623 waaH; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4151 UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
D PMPD1_4147 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PMPD1_4152 UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4153 Lipopolysaccharide core heptose(I) kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D PMPD1_4155 Lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D PMPD1_4149 UDP-galactose:(Galactosyl) LPS alpha-1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-]
D PMPD1_4148 Beta-1,4-galactosyltransferase K23067 waaX; beta-1,4-galactosyltransferase
D PMPD1_4150 heptose II phosphotransferase K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D PMPD1_3875 Phosphoethanolamine transferase CptA K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PMPD1_1007 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMPD1_0977 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PMPD1_3808 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PMPD1_4144 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PMPD1_4259 O-antigen assembly polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D PMPD1_2826 LPS O-antigen chain length determinant protein WzzB K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D PMPD1_2838 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_4269 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMPD1_2837 UDP-glucose 4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmak01011]
D PMPD1_0497 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMPD1_4085 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMPD1_0868 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMPD1_0865 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMPD1_0862 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMPD1_0869 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMPD1_2397 catabolic alanine racemase DadX K01775 alr; alanine racemase [EC:5.1.1.1]
D PMPD1_4087 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMPD1_1877 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PMPD1_0864 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMPD1_0867 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMPD1_3813 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMPD1_1606 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PMPD1_1802 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PMPD1_0320 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMPD1_0929 bifunctional glycosyl transferase/transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMPD1_1401 Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMPD1_3762 Peptidoglycan D,D-transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMPD1_0861 Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_3590 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_1398 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_1604 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_2801 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMPD1_0506 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMPD1_3220 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D PMPD1_1523 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D PMPD1_0479 Biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_0866 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_1400 Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_1515 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS
D PMPD1_2088 L,D-transpeptidase family protein K19236 ycfS; L,D-transpeptidase YcfS
D PMPD1_1670 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D PMPD1_3574 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMPD1_3054 Penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PMPD1_2100 Putative endopeptidase YdhO K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D PMPD1_2926 Bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PMPD1_2543 Murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PMPD1_0785 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PMPD1_3562 Membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PMPD1_2404 Lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PMPD1_3443 Murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PMPD1_3669 Membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D PMPD1_0983 Membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PMPD1_1878 Lytic transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D PMPD1_3327 Membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PMPD1_1829 Endolytic murein transglycosylase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PMPD1_1399 Endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PMPD1_3209 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_3564 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_3917 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_1625 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_0885 N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_2089 major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:pmak01004]
D PMPD1_1824 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMPD1_1823 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMPD1_1770 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMPD1_3049 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMPD1_1773 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMPD1_1827 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PMPD1_0524 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1772 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1825 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2186 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_2763 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_4170 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMPD1_1690 bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PMPD1_0956 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMPD1_2316 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMPD1_1276 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PMPD1_1223 Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PMPD1_2357 Acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PMPD1_1213 Thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D PMPD1_3981 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMPD1_2410 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PMPD1_4020 Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMPD1_1822 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMPD1_3815 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMPD1_0129 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMPD1_3787 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pmak01008]
D PMPD1_2951 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
C 01006 Prenyltransferases [BR:pmak01006]
D PMPD1_1191 farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PMPD1_0499 Octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PMPD1_0950 Ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMPD1_3915 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMPD1_4113 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PMPD1_4022 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMPD1_1198 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pmak01007]
D PMPD1_3184 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMPD1_1426 Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMPD1_0924 Glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PMPD1_2120 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMPD1_0331 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMPD1_1283 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMPD1_2566 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMPD1_2891 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMPD1_0807 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMPD1_0554 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMPD1_1407 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMPD1_3607 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMPD1_2552 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMPD1_1675 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMPD1_3296 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMPD1_0080 Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMPD1_0081 Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMPD1_1647 Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMPD1_0971 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMPD1_2056 Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMPD1_3437 Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMPD1_2060 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMPD1_2061 Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMPD1_1092 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1899 Aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_1673 Aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMPD1_0036 Valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D PMPD1_3001 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMPD1_3169 Putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D PMPD1_4010 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D PMPD1_1005 Methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D PMPD1_2262 Aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D PMPD1_2820 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMPD1_4142 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PMPD1_1496 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMPD1_2143 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_2563 cystathione beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMPD1_0341 Acetylornithine/succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMPD1_2031 Acetylornithine/succinyldiaminopimelate aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D PMPD1_2812 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D PMPD1_1494 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMPD1_0934 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMPD1_4281 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMPD1_1653 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMPD1_1001 Aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D PMPD1_4262 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pmak00194]
D PMPD1_4313 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMPD1_4312 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMPD1_4311 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMPD1_4310 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMPD1_4309 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMPD1_4308 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMPD1_4307 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMPD1_4306 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMPD1_4305 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pmak03000]
D PMPD1_2659 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMPD1_3999 superoxide response transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMPD1_2231 Helix-turn-helix domain protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMPD1_0789 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMPD1_3161 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D PMPD1_1468 Putative DNA-3-methyladenine glycosidase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PMPD1_1025 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMPD1_2263 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMPD1_3495 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMPD1_3557 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMPD1_3749 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMPD1_3956 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMPD1_4278 LysR family transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D PMPD1_4230 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PMPD1_4093 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PMPD1_3632 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D PMPD1_1904 HTH-type transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PMPD1_1930 HTH-type transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PMPD1_3384 DNA-binding transcriptional dual regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PMPD1_2336 HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PMPD1_2735 Transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D PMPD1_3157 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D PMPD1_0432 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D PMPD1_2736 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D PMPD1_4286 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D PMPD1_0773 Transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D PMPD1_0301 Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PMPD1_1111 DeoR family glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PMPD1_1255 L-fucose operon activator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D PMPD1_3222 DeoR family transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D PMPD1_1123 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PMPD1_2798 LacI family DNA-binding transcriptional regulator K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D PMPD1_0619 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMPD1_0686 Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMPD1_2902 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMPD1_3600 Transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMPD1_4289 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMPD1_0041 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D PMPD1_3483 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D PMPD1_4109 Transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PMPD1_0857 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PMPD1_1484 Trehalose operon transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D PMPD1_1136 LacI family transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D PMPD1_2097 HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D PMPD1_0286 Transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PMPD1_2197 LacI family DNA-binding transcriptional regulator K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D PMPD1_2145 Transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D PMPD1_2733 Phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D PMPD1_1548 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PMPD1_1553 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D PMPD1_1324 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PMPD1_2585 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PMPD1_2400 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D PMPD1_0888 Pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PMPD1_0013 Galactonate operon transcriptional repressor K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D PMPD1_0176 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PMPD1_3040 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PMPD1_3536 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PMPD1_2876 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D PMPD1_2123 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PMPD1_2127 HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D PMPD1_1246 TetR/AcrR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D PMPD1_4164 Nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D PMPD1_1713 HTH-type transcriptional regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator
D PMPD1_2106 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PMPD1_3822 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PMPD1_2257 TetR/AcrR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D PMPD1_4091 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D PMPD1_1359 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D PMPD1_4301 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PMPD1_1643 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PMPD1_1218 Transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D PMPD1_1073 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D PMPD1_2647 Transcriptional regulatory protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D PMPD1_0302 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D PMPD1_1753 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PMPD1_2115 Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PMPD1_3404 Transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D PMPD1_1919 winged helix-turn-helix transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D PMPD1_0121 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PMPD1_2684 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PMPD1_1271 Transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PMPD1_0411 Zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D PMPD1_3998 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D PMPD1_1540 MerR family transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
D PMPD1_1430 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PMPD1_4015 Zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D PMPD1_4047 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PMPD1_1965 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D PMPD1_2431 Transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D PMPD1_0343 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMPD1_2273 Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PMPD1_3313 Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PMPD1_3908 HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PMPD1_2235 Rrf2 family transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
D PMPD1_1571 Transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D PMPD1_0537 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PMPD1_2536 Transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D PMPD1_4084 Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PMPD1_0437 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMPD1_0786 TrpR family transcriptional regulator K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D PMPD1_0498 transcriptional regulator K07724 ner; Ner family transcriptional regulator
D PMPD1_0588 Transcriptional regulator K07724 ner; Ner family transcriptional regulator
D PMPD1_0849 HTH-type transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D PMPD1_0768 Transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PMPD1_2815 HTH-type transcriptional regulator PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D PMPD1_1593 helix-turn-helix transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PMPD1_1722 Transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D PMPD1_1774 Helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PMPD1_0753 hypothetical protein K02019 modE; molybdate transport system regulatory protein
D PMPD1_1481 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D PMPD1_0119 Transcriptional regulator K07726 K07726; putative transcriptional regulator
D PMPD1_0595 Putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D PMPD1_4103 met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D PMPD1_2607 Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMPD1_0162 Bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PMPD1_1205 Transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PMPD1_2522 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PMPD1_4454 Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PMPD1_4218 Transcription antitermination protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D PMPD1_4409 Transcription antitermination protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D PMPD1_0464 transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D PMPD1_1422 Transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D PMPD1_2156 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D PMPD1_0114 Mannitol operon repressor K02562 mtlR; mannitol operon repressor
D PMPD1_0615 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PMPD1_2789 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PMPD1_2303 Transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PMPD1_3254 Glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D PMPD1_2310 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D PMPD1_2307 Phage shock protein C K03973 pspC; phage shock protein C
D PMPD1_0592 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D PMPD1_1033 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D PMPD1_3655 hypothetical protein K07735 algH; putative transcriptional regulator
D PMPD1_0925 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D PMPD1_1183 Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D PMPD1_1014 Sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl
D PMPD1_0858 Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pmak03021]
D PMPD1_0408 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMPD1_4074 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMPD1_4073 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMPD1_4182 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMPD1_3820 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PMPD1_3497 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D PMPD1_3342 ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PMPD1_0256 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D PMPD1_0484 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PMPD1_0678 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_2613 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_0827 RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PMPD1_0516 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PMPD1_1186 Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PMPD1_4079 Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PMPD1_0472 stringent starvation protein A K03599 sspA; stringent starvation protein A
D PMPD1_0473 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D PMPD1_3341 Anti-sigma-E factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D PMPD1_3340 Sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D PMPD1_3339 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D PMPD1_0925 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D PMPD1_0507 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PMPD1_0312 Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D PMPD1_4270 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMPD1_0966 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:pmak03019]
D PMPD1_1817 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMPD1_0454 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PMPD1_3336 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMPD1_3907 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMPD1_3921 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PMPD1_4273 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PMPD1_1513 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PMPD1_0523 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMPD1_4239 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMPD1_3541 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4319 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_0521 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMPD1_4270 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMPD1_4125 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMPD1_0802 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PMPD1_3938 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMPD1_3914 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMPD1_3268 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PMPD1_0923 Poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PMPD1_3583 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PMPD1_3436 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D PMPD1_0449 Regulatory protein CsrD K18765 csrD; RNase E specificity factor CsrD
D PMPD1_4114 ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D PMPD1_0548 Ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D PMPD1_0481 RNase adapter protein RapZ K06958 rapZ; RNase adapter protein RapZ
D PMPD1_2285 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PMPD1_0928 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pmak03011]
D PMPD1_1656 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PMPD1_0945 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PMPD1_0390 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PMPD1_0407 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PMPD1_0401 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PMPD1_0377 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PMPD1_0398 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PMPD1_0471 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PMPD1_0383 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PMPD1_0406 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PMPD1_0376 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PMPD1_0405 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PMPD1_0397 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PMPD1_3427 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PMPD1_0393 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PMPD1_3899 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PMPD1_0388 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PMPD1_0805 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PMPD1_3818 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PMPD1_4077 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PMPD1_0387 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PMPD1_0384 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PMPD1_0385 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PMPD1_0396 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PMPD1_0399 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PMPD1_3898 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PMPD1_4076 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PMPD1_4078 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PMPD1_4075 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMPD1_0470 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PMPD1_0394 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PMPD1_0403 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PMPD1_0391 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PMPD1_0409 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PMPD1_0400 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PMPD1_3424 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PMPD1_2059 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PMPD1_0500 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PMPD1_0389 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PMPD1_0386 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PMPD1_0395 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PMPD1_0501 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PMPD1_4160 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PMPD1_0392 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PMPD1_0402 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PMPD1_1243 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PMPD1_4107 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PMPD1_1821 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PMPD1_4159 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PMPD1_4354 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PMPD1_2058 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PMPD1_1242 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMPD1_2936 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PMPD1_R003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R089 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R098 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R103 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R114 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R087 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R101 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R112 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R067 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R086 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R094 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R111 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pmak03009]
D PMPD1_3336 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMPD1_3921 Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PMPD1_3335 GTPase Era K03595 era; GTPase
D PMPD1_0503 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D PMPD1_0925 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D PMPD1_0516 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D PMPD1_1186 Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PMPD1_4079 Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PMPD1_2934 Pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PMPD1_0821 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PMPD1_0415 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PMPD1_0697 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PMPD1_0252 Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PMPD1_3653 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PMPD1_2439 Ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D PMPD1_4304 rRNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMPD1_0859 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PMPD1_3859 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PMPD1_0200 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PMPD1_2426 Ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PMPD1_3906 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PMPD1_0510 Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PMPD1_1560 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D PMPD1_3836 Ribosomal RNA large subunit methyltransferase G K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D PMPD1_1402 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PMPD1_1703 Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PMPD1_0195 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PMPD1_1684 Ribosomal RNA large subunit methyltransferase K/L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D PMPD1_3555 Ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PMPD1_3300 Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PMPD1_3545 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PMPD1_1618 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D PMPD1_0826 Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMPD1_2342 Pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PMPD1_1818 Pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PMPD1_3416 Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PMPD1_1860 Pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PMPD1_3407 Methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D PMPD1_0699 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PMPD1_1800 Ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PMPD1_1612 putative alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PMPD1_3426 Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PMPD1_1586 Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PMPD1_1652 Ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PMPD1_0440 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PMPD1_3056 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PMPD1_0613 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PMPD1_1852 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PMPD1_1817 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMPD1_0454 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PMPD1_3656 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PMPD1_2295 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PMPD1_0523 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMPD1_3345 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D PMPD1_3922 Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMPD1_3293 ribosome biogenesis GTPase Der K03977 engA; GTPase
D PMPD1_3913 GTPase HflX K03665 hflX; GTPase
D PMPD1_0421 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMPD1_4183 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMPD1_0518 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PMPD1_0515 Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D PMPD1_1284 Ribosome-associated protein K14761 rlbA; ribosome-associated protein
D PMPD1_1403 Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D PMPD1_1415 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D PMPD1_0509 ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D PMPD1_0113 YibL family ribosome-associated protein K14762 yibL; ribosome-associated protein
D PMPD1_3878 ribosome-associated protein K09889 yjgA; ribosome-associated protein
D PMPD1_1689 ribosome modulation factor K03812 rmf; ribosome modulation factor
D PMPD1_0483 ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D PMPD1_3418 Translation inhibitor protein RaiA K05809 raiA; ribosome-associated inhibitor A
D PMPD1_2001 Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D PMPD1_1820 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pmak03016]
D PMPD1_0194 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PMPD1_3812 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PMPD1_3184 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMPD1_0971 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMPD1_0807 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMPD1_1407 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMPD1_2891 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMPD1_1426 Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMPD1_2566 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMPD1_3607 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMPD1_2552 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMPD1_3437 Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMPD1_1675 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMPD1_2056 Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMPD1_1647 Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMPD1_1283 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMPD1_0554 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMPD1_3296 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMPD1_2060 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMPD1_2061 Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMPD1_2120 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMPD1_0331 Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMPD1_4192 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PMPD1_1834 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMPD1_3666 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PMPD1_0972 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PMPD1_3030 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PMPD1_0519 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PMPD1_3504 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PMPD1_3312 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMPD1_0421 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMPD1_3915 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMPD1_4350 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PMPD1_4303 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMPD1_2383 Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMPD1_3891 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMPD1_4353 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PMPD1_R080 Bacterial RNase P class A K01978 rnpB; RNase P catalytic RNA component
D PMPD1_2102 Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PMPD1_4166 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PMPD1_2322 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PMPD1_2409 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PMPD1_0927 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PMPD1_0771 Energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D PMPD1_0080 Glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMPD1_0081 Glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMPD1_0924 Glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D PMPD1_1265 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PMPD1_0022 Prolyl-tRNA synthetase K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PMPD1_3328 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PMPD1_4013 tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PMPD1_0438 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PMPD1_1514 tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PMPD1_1417 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PMPD1_2556 Carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PMPD1_3153 Methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PMPD1_2557 tRNA U34 carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PMPD1_1666 tRNA 5-carboxymethoxyuridine methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D PMPD1_0792 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D PMPD1_4089 tRNA/tmRNA (uracil-C(5))-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PMPD1_3425 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PMPD1_3407 Methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D PMPD1_4184 tRNA (guanosine(18)-2'-O)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D PMPD1_3314 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PMPD1_4132 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PMPD1_3344 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PMPD1_3549 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D PMPD1_0826 Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMPD1_1857 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMPD1_2296 tRNA-cytidine(32) 2-sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PMPD1_0247 Sulfur carrier protein TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PMPD1_0375 sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PMPD1_0374 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PMPD1_0373 sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PMPD1_1705 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PMPD1_3310 Iron-binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D PMPD1_3615 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D PMPD1_0549 tRNA-(2-methylthio-N-6-isopentenyl-adenosine)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PMPD1_3050 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PMPD1_1176 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PMPD1_1214 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMPD1_3521 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMPD1_3537 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMPD1_3552 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMPD1_3920 Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PMPD1_2660 Epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D PMPD1_1177 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PMPD1_1193 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMPD1_0964 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PMPD1_3249 tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PMPD1_2412 tRNA (Adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PMPD1_3817 tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PMPD1_3918 tRNA (Adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PMPD1_3561 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PMPD1_3907 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMPD1_0521 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMPD1_0205 tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:pmak03012]
D PMPD1_2329 Translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D PMPD1_0517 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PMPD1_2057 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PMPD1_0364 Glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PMPD1_0946 Elongation factor Ts K02357 tsf; elongation factor Ts
D PMPD1_0379 Elongation factor Tu K02358 tuf; elongation factor Tu
D PMPD1_4081 Elongation factor Tu K02358 tuf; elongation factor Tu
D PMPD1_0378 Elongation factor G K02355 fusA; elongation factor G
D PMPD1_0096 Selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D PMPD1_2009 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PMPD1_0948 Ribosome-recycling factor K02838 frr; ribosome recycling factor
D PMPD1_2010 peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PMPD1_2002 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PMPD1_1638 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PMPD1_2921 Elongation factor P-like protein K02356 efp; elongation factor P
D PMPD1_3931 Elongation factor P K02356 efp; elongation factor P
D PMPD1_3925 Elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PMPD1_3932 Lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D PMPD1_3052 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D PMPD1_3608 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PMPD1_0755 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PMPD1_0412 alternative ribosome-rescue factor A K09890 arfA; alternative ribosome-rescue factor
D PMPD1_0969 Aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pmak03110]
D PMPD1_1635 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PMPD1_3414 Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PMPD1_1208 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PMPD1_4112 ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PMPD1_0802 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PMPD1_3308 Chaperone protein HscA K04044 hscA; molecular chaperone HscA
D PMPD1_2861 Chaperone K04046 yegD; hypothetical chaperone protein
D PMPD1_3938 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMPD1_0803 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMPD1_0825 Co-chaperone protein DjlA K05801 djlA; DnaJ like chaperone protein
D PMPD1_3309 Co-chaperone protein HscB K04082 hscB; molecular chaperone HscB
D PMPD1_0316 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D PMPD1_3348 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PMPD1_0020 Small heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA
D PMPD1_0317 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D PMPD1_3939 chaperonin GroES K04078 groES; chaperonin GroES
D PMPD1_0940 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D PMPD1_0511 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMPD1_4306 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMPD1_4135 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PMPD1_2039 ATP-independent periplasmic protein-refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D PMPD1_4129 Periplasmic repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D PMPD1_0543 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_1429 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PMPD1_0337 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMPD1_1282 Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PMPD1_1211 Peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PMPD1_0371 Peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PMPD1_3896 Peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PMPD1_0809 Peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D PMPD1_0368 Peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PMPD1_4276 Peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D PMPD1_0823 peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PMPD1_4272 Thioredoxin K03671 TXN; thioredoxin
D PMPD1_3408 Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D PMPD1_1274 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D PMPD1_1610 Glutaredoxin 1 K03674 grxA; glutaredoxin 1
D PMPD1_1798 glutaredoxin 2 K03675 grxB; glutaredoxin 2
D PMPD1_4136 Glutaredoxin K03676 grxC; glutaredoxin 3
D PMPD1_2101 Glutaredoxin K07390 grxD; monothiol glutaredoxin
D PMPD1_4204 Thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMPD1_2401 Disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PMPD1_3610 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMPD1_3945 Thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PMPD1_3066 Cytochrome c-type biogenesis protein CcmG, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pmak04131]
D PMPD1_3301 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMPD1_0061 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_2389 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_1475 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4320 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_2090 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_2537 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pmak03051]
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pmak03032]
D PMPD1_0986 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMPD1_2659 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMPD1_4056 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D PMPD1_1210 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PMPD1_2062 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PMPD1_1657 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PMPD1_0001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PMPD1_3113 Helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMPD1_4011 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMPD1_0050 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D PMPD1_3819 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMPD1_4005 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_4434 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_0960 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMPD1_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMPD1_0555 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMPD1_1405 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMPD1_1831 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMPD1_0987 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMPD1_1250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMPD1_0698 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMPD1_2519 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_2529 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_3143 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_0959 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMPD1_4203 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMPD1_3189 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4180 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_2152 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D PMPD1_0328 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMPD1_1434 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D PMPD1_3260 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D PMPD1_2969 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMPD1_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMPD1_3788 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMPD1_3792 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMPD1_2337 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMPD1_2382 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pmak03036]
D PMPD1_2659 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMPD1_3336 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMPD1_2372 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D PMPD1_4056 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D PMPD1_1210 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PMPD1_2062 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PMPD1_1657 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PMPD1_0789 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMPD1_0001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PMPD1_3856 DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein
D PMPD1_1702 Heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D PMPD1_1566 DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D PMPD1_0437 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMPD1_3914 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMPD1_3632 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D PMPD1_1643 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PMPD1_2937 nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D PMPD1_1669 Chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D PMPD1_1668 Chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D PMPD1_1667 Chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D PMPD1_0871 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PMPD1_3507 Cell division protein FtsB K05589 ftsB; cell division protein FtsB
D PMPD1_0254 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PMPD1_0861 Peptidoglycan D,D-transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_3590 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMPD1_1644 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PMPD1_0860 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PMPD1_4110 Cell division protein FtsN K03591 ftsN; cell division protein FtsN
D PMPD1_0870 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PMPD1_0866 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_0255 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PMPD1_0872 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMPD1_3190 cell division protein ZipA K03528 zipA; cell division protein ZipA
D PMPD1_3628 Cell division protein ZapA K09888 zapA; cell division protein ZapA
D PMPD1_4115 Cell division protein ZapB K09892 zapB; cell division protein ZapB
D PMPD1_1682 cell division protein ZapC K18657 zapC; cell division protein ZapC
D PMPD1_0878 Cell division protein ZapD K18778 zapD; cell division protein ZapD
D PMPD1_0469 cell division protein ZapE K06916 zapE; cell division protein ZapE
D PMPD1_3897 Opacity-associated protein A K07269 ytfB; cell division protein YtfB
D PMPD1_3209 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_3564 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_3917 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMPD1_1245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PMPD1_2406 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PMPD1_2407 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PMPD1_2408 Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D PMPD1_1694 Cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA
D PMPD1_4164 Nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D PMPD1_1434 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D PMPD1_0450 Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PMPD1_0451 Cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PMPD1_0452 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PMPD1_1400 Peptidoglycan glycosyltransferase MrdB K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_4455 Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PMPD1_2522 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PMPD1_4454 Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PMPD1_3788 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMPD1_3792 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMPD1_4303 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMPD1_4304 rRNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMPD1_4248 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PMPD1_3611 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PMPD1_2890 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMPD1_0339 Putative adenosine monophosphate-protein transferase Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PMPD1_4202 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pmak03400]
D PMPD1_1469 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PMPD1_1439 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PMPD1_3347 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PMPD1_3667 Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PMPD1_2130 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMPD1_0876 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PMPD1_4163 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PMPD1_2954 DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D PMPD1_3821 G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D PMPD1_1468 Putative DNA-3-methyladenine glycosidase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PMPD1_0044 DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PMPD1_4158 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMPD1_1447 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PMPD1_2380 Exonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D PMPD1_2915 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PMPD1_4058 deoxyribonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7]
D PMPD1_3609 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMPD1_3189 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4180 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMPD1_4203 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMPD1_4006 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PMPD1_1500 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMPD1_1720 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PMPD1_2041 excinuclease Cho K05984 cho; excinuclease Cho [EC:3.1.25.-]
D PMPD1_4246 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMPD1_4074 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMPD1_4073 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMPD1_0408 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMPD1_4182 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMPD1_1842 Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMPD1_3496 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PMPD1_3916 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PMPD1_3584 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D PMPD1_2808 Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PMPD1_3289 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PMPD1_1192 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PMPD1_2530 Exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D PMPD1_0960 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMPD1_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMPD1_0555 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMPD1_1405 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMPD1_1831 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMPD1_0987 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMPD1_1250 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMPD1_0698 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMPD1_2519 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_2529 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_3143 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D PMPD1_4005 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_4434 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_0328 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMPD1_2658 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PMPD1_3567 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMPD1_3569 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMPD1_3566 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMPD1_2449 recombinase RecA K03553 recA; recombination protein RecA
D PMPD1_3439 recombinase RecA K03553 recA; recombination protein RecA
D PMPD1_2548 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PMPD1_2547 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMPD1_2549 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMPD1_4108 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMPD1_3900 Primosomal replication protein N K02686 priB; primosomal replication protein N
D PMPD1_1248 Prephenate dehydrogenase K04067 priC; primosomal replication protein N''
D PMPD1_0049 Primosomal protein I K02317 dnaT; DNA replication protein DnaT
D PMPD1_1166 Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D PMPD1_1167 Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D PMPD1_0767 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PMPD1_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PMPD1_4185 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMPD1_3334 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PMPD1_1252 Recombination protein RecR K06187 recR; recombination protein RecR
D PMPD1_3350 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PMPD1_1162 Recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D PMPD1_2489 Recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D PMPD1_0897 type I-F CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PMPD1_2935 ATP-dependent helicase K19789 radD; DNA repair protein RadD
D PMPD1_0581 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PMPD1_2969 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMPD1_0004 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMPD1_2337 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMPD1_4056 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D PMPD1_1210 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D PMPD1_0437 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMPD1_2062 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PMPD1_1657 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PMPD1_4239 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMPD1_2372 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D PMPD1_1010 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PMPD1_2459 translesion error-prone DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V
D PMPD1_2591 translesion error-prone DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V
D PMPD1_4451 DNA polymerase V K03502 umuC; DNA polymerase V
D PMPD1_2460 translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMPD1_2590 translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMPD1_4450 Error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PMPD1_4018 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMPD1_0828 DNA polymerase K02336 polB; DNA polymerase II [EC:2.7.7.7]
D PMPD1_1795 DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D PMPD1_3438 Regulatory protein RecX K03565 recX; regulatory protein
D PMPD1_4275 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PMPD1_1698 DNA helicase K03658 helD; DNA helicase IV [EC:5.6.2.4]
D PMPD1_1542 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PMPD1_2413 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PMPD1_2168 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D PMPD1_2973 Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMPD1_3396 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMPD1_2974 Ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMPD1_3397 class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pmak03029]
D PMPD1_0517 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PMPD1_2057 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PMPD1_0946 Elongation factor Ts K02357 tsf; elongation factor Ts
D PMPD1_0379 Elongation factor Tu K02358 tuf; elongation factor Tu
D PMPD1_4081 Elongation factor Tu K02358 tuf; elongation factor Tu
D PMPD1_0378 Elongation factor G K02355 fusA; elongation factor G
D PMPD1_3335 GTPase Era K03595 era; GTPase
D PMPD1_2120 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMPD1_1407 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMPD1_2552 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMPD1_2566 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMPD1_1886 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PMPD1_4005 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_4434 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMPD1_0953 Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PMPD1_0802 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PMPD1_3348 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PMPD1_3938 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMPD1_3939 chaperonin GroES K04078 groES; chaperonin GroES
D PMPD1_0803 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMPD1_3312 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMPD1_3309 Co-chaperone protein HscB K04082 hscB; molecular chaperone HscB
D PMPD1_2101 Glutaredoxin K07390 grxD; monothiol glutaredoxin
D PMPD1_2890 Iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMPD1_1198 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PMPD1_4351 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pmak02000]
D PMPD1_1659 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PMPD1_1219 Multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMPD1_1220 Multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMPD1_1103 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D PMPD1_0183 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMPD1_2962 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PMPD1_3863 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PMPD1_1640 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PMPD1_1641 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PMPD1_3199 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PMPD1_0052 putative ATP-binding cassette transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D PMPD1_2953 Multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D PMPD1_1685 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PMPD1_3204 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D PMPD1_4124 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PMPD1_3203 sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PMPD1_3202 sulfate/thiosulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PMPD1_3201 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PMPD1_1486 molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMPD1_3421 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMPD1_1487 molybdate transport system permease protein K02018 modB; molybdate transport system permease protein
D PMPD1_1488 molybdate transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMPD1_1480 Molybdenum ABC transporter ATP-binding protein K05776 modF; molybdate transport system ATP-binding protein
D PMPD1_2594 ABC transporter substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D PMPD1_2595 ABC transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein
D PMPD1_0357 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D PMPD1_0359 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D PMPD1_0358 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D PMPD1_1003 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1939 NitT/TauT family transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1942 sulfonate transport system substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1952 Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_2207 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_3180 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PMPD1_1679 Alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1940 NitT/TauT family transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1948 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1949 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D PMPD1_1678 Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PMPD1_1947 Alkanesulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PMPD1_0243 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMPD1_0242 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D PMPD1_0244 Ferric iron ABC transporter, substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMPD1_0848 thiamine transport system substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D PMPD1_0847 thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D PMPD1_0846 thiamine transport system ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PMPD1_1847 spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMPD1_1848 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D PMPD1_1849 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein
D PMPD1_1850 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PMPD1_1614 putrescine transport system substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D PMPD1_1617 putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D PMPD1_1616 putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D PMPD1_1615 putrescine transport system ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D PMPD1_4044 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PMPD1_4041 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PMPD1_4042 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PMPD1_4040 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PMPD1_3400 glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PMPD1_3399 glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D PMPD1_3398 glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_0258 L-proline glycine betaine binding ABC transporter protein ProX K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_1318 ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_1535 Osmoprotectant ABC transporter binding protein YehZ K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_2160 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PMPD1_0259 Glycine betaine ABC transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_0260 L-proline glycine betaine ABC transport system permease protein ProW K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1320 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1321 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1536 Osmoprotectant ABC transporter permease protein YehY K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_1538 Osmoprotectant ABC transporter inner membrane protein YehW K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_2159 osmoprotectant ABC transporter permease OsmW K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_2161 osmoprotectant ABC transporter permease OsmY K05846 opuBD; osmoprotectant transport system permease protein
D PMPD1_0261 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_1322 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_1537 Osmoprotectant ABC transporter ATP-binding subunit YehX K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_2158 osmoprotectant ABC transporter ATP-binding protein OsmV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PMPD1_2792 putative hydroxymethylpyrimidine transport system substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PMPD1_2791 putative hydroxymethylpyrimidine transport system permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PMPD1_2790 putative hydroxymethylpyrimidine transport system ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PMPD1_2784 NitT/TauT family transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PMPD1_2785 NitT/TauT family transport system permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PMPD1_1941 NitT/TauT family transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PMPD1_2786 NitT/TauT family transport system ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PMPD1_4027 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D PMPD1_4028 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D PMPD1_4029 maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D PMPD1_1228 multiple sugar transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_1331 multiple sugar transport system ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_4026 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_1079 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_3971 multiple sugar transport system ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_2901 methyl-galactoside transport system substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PMPD1_2899 methyl-galactoside transport system permease protein K10541 mglC; methyl-galactoside transport system permease protein
D PMPD1_2900 methyl-galactoside transport system ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D PMPD1_0074 fructose transport system substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein
D PMPD1_0073 fructose transport system permease protein K10553 frcC; fructose transport system permease protein
D PMPD1_0072 fructose transport system ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein
D PMPD1_0573 ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_0618 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_2713 ribose transport system substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_4291 Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PMPD1_0575 ribose transport system permease protein K10440 rbsC; ribose transport system permease protein
D PMPD1_0621 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D PMPD1_2714 ribose transport system permease protein K10440 rbsC; ribose transport system permease protein
D PMPD1_4292 Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D PMPD1_0574 ribose transport system ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_0620 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_2715 ribose transport system ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_4293 Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMPD1_3465 ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D PMPD1_3462 erythritol transport system permease protein K17203 eryF; erythritol transport system permease protein
D PMPD1_3463 erythritol transport system ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D PMPD1_0278 sn-glycerol 3-phosphate transport system substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PMPD1_0279 sn-glycerol 3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PMPD1_0280 sn-glycerol 3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PMPD1_0281 sn-glycerol 3-phosphate transport system ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D PMPD1_1231 sorbitol/mannitol transport system substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D PMPD1_1230 sorbitol/mannitol transport system permease protein K10228 smoF; polyol transport system permease protein
D PMPD1_1229 sorbitol/mannitol transport system permease protein K10229 smoG; polyol transport system permease protein
D PMPD1_0348 putative nucleoside ABC transporter substrate-binding component K07335 bmpA; basic membrane protein A and related proteins
D PMPD1_0350 Putative deoxyribose-specific ABC transporter permease protein K23535 nupB; general nucleoside transport system permease protein
D PMPD1_0351 Putative deoxyribose-specific ABC transporter permease protein K23536 nupC; general nucleoside transport system permease protein
D PMPD1_0349 Putative deoxyribose-specific ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PMPD1_1520 iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D PMPD1_1519 iron ABC transporter ATP-binding protein FetA K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D PMPD1_0493 phospholipid transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMPD1_0492 phospholipid transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMPD1_0491 phospholipid transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMPD1_0494 phospholipid transport system substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PMPD1_0495 phospholipid transport system transporter-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PMPD1_1081 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PMPD1_1328 multiple sugar transport system substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PMPD1_2770 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PMPD1_3739 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PMPD1_3975 multiple sugar transport system substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PMPD1_1082 Sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D PMPD1_1329 multiple sugar transport system permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PMPD1_3974 multiple sugar transport system permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PMPD1_1080 Carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PMPD1_1330 multiple sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PMPD1_3973 multiple sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PMPD1_3042 simple sugar transport system substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PMPD1_3223 ABC-type sugar transport system, periplasmic component K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PMPD1_1065 carbohydrate transporter K02057 ABC.SS.P; simple sugar transport system permease protein
D PMPD1_3044 simple sugar transport system permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D PMPD1_3045 simple sugar transport system permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D PMPD1_3225 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D PMPD1_3226 Sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D PMPD1_3043 simple sugar transport system ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_3224 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PMPD1_1170 Phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PMPD1_4332 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D PMPD1_3267 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D PMPD1_4333 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D PMPD1_3266 phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PMPD1_4334 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PMPD1_3265 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMPD1_4335 Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMPD1_2722 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D PMPD1_2720 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D PMPD1_2721 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D PMPD1_2723 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PMPD1_2261 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D PMPD1_3959 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D PMPD1_3020 Histidine ABC transporter, permease protein HisM K10015 hisM; histidine transport system permease protein
D PMPD1_3021 Histidine ABC transporter, permease protein HisQ K10016 hisQ; histidine transport system permease protein
D PMPD1_3019 Histidine ABC transporter, ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_3022 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ K10014 hisJ; histidine transport system substrate-binding protein
D PMPD1_1564 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D PMPD1_1563 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein
D PMPD1_1562 glutamine ABC transporter ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1621 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein
D PMPD1_1619 arginine ABC transporter permease ArtM K09998 artM; arginine transport system permease protein
D PMPD1_1620 arginine ABC transporter permease ArtQ K09999 artQ; arginine transport system permease protein
D PMPD1_1622 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_0904 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMPD1_1412 glutamate/aspartate transport system substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D PMPD1_1410 glutamate/aspartate transport system permease protein K10002 gltK; glutamate/aspartate transport system permease protein
D PMPD1_1411 glutamate/aspartate transport system permease protein K10003 gltJ; glutamate/aspartate transport system permease protein
D PMPD1_1409 glutamate/aspartate transport system ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1554 Histidine ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D PMPD1_1556 Histidine ABC transporter, permease protein HisM K10019 occM; octopine/nopaline transport system permease protein
D PMPD1_1555 Histidine ABC transporter, permease protein HisQ K10020 occQ; octopine/nopaline transport system permease protein
D PMPD1_1557 Histidine ABC transporter, ATP-binding protein HisP K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_0429 general L-amino acid transport system substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D PMPD1_0428 general L-amino acid transport system permease protein K09970 aapQ; general L-amino acid transport system permease protein
D PMPD1_0427 general L-amino acid transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D PMPD1_0426 general L-amino acid transport system ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_2610 Cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PMPD1_2609 cystine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PMPD1_2608 L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_0268 branched-chain amino acid transport system substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D PMPD1_0269 branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D PMPD1_0270 branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D PMPD1_0271 branched-chain amino acid transport system ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D PMPD1_0272 branched-chain amino acid transport system ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D PMPD1_0974 D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PMPD1_2215 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PMPD1_3387 D-methionine transport system substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PMPD1_0975 D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PMPD1_2216 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D PMPD1_3388 D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PMPD1_0976 D-methionine transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMPD1_2217 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMPD1_3389 D-methionine transport system ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PMPD1_0781 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D PMPD1_0780 urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D PMPD1_0779 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D PMPD1_0778 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D PMPD1_0777 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D PMPD1_1499 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D PMPD1_0169 polar amino acid transport system substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_0997 polar amino acid transport system substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_1084 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_1122 Amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_1889 polar amino acid transport system substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_3470 ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_3508 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PMPD1_0167 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_0168 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_0998 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_0999 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_1085 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_1119 Amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_1120 Amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_1890 polar amino acid transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_3472 ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_3473 ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_3509 Amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PMPD1_0166 polar amino acid transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1000 polar amino acid transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1086 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1121 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_1891 polar amino acid transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_3474 Putative amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_3510 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PMPD1_2299 Oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2367 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2368 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D PMPD1_2366 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D PMPD1_2365 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D PMPD1_2364 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PMPD1_2363 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PMPD1_0134 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_2259 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_3745 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMPD1_0135 Dipeptide transport system permease protein DppB K12369 dppB; dipeptide transport system permease protein
D PMPD1_0136 Dipeptide transport system permease protein DppC K12370 dppC; dipeptide transport system permease protein
D PMPD1_0137 Dipeptide transport ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D PMPD1_0138 Dipeptide transport ATP-binding protein DppF K12372 dppF; dipeptide transport system ATP-binding protein
D PMPD1_2311 cationic peptide transport system substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMPD1_2312 cationic peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D PMPD1_2313 cationic peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D PMPD1_2314 cationic peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D PMPD1_2315 cationic peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D PMPD1_1582 glutathione transport system substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PMPD1_2239 peptide/nickel transport system substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PMPD1_1583 glutathione transport system permease protein K13890 gsiC; glutathione transport system permease protein
D PMPD1_2238 peptide/nickel transport system permease protein K13890 gsiC; glutathione transport system permease protein
D PMPD1_1584 glutathione transport system permease protein K13891 gsiD; glutathione transport system permease protein
D PMPD1_1581 glutathione transport system ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D PMPD1_0028 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMPD1_1953 peptide/nickel transport system substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMPD1_1961 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMPD1_0029 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMPD1_1954 peptide/nickel transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMPD1_1962 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PMPD1_0030 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_1955 peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_1963 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_2237 peptide/nickel transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PMPD1_0031 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_1956 peptide/nickel transport system ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_1964 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_2242 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PMPD1_0032 Dipeptide transport ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PMPD1_2928 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D PMPD1_2929 Microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein
D PMPD1_2930 Microcin ABC transporter permease K13895 yejE; microcin C transport system permease protein
D PMPD1_2931 Microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D PMPD1_0054 iron complex transport system substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PMPD1_0932 Ferric hydroxamate ABC transporter, periplasmic substrate binding protein FhuD K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PMPD1_0053 iron complex transport system permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D PMPD1_0933 Ferric hydroxamate ABC transporter, permease component FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PMPD1_0931 Ferric hydroxamate ABC transporter, ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D PMPD1_2071 Hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D PMPD1_3694 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D PMPD1_2070 Hemin transport system permease protein K25133 hmuU; heme transport system permease protein
D PMPD1_2069 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PMPD1_0179 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMPD1_2682 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMPD1_2911 iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMPD1_3420 ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMPD1_3480 iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMPD1_2910 iron complex transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PMPD1_2909 iron complex transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMPD1_0937 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D PMPD1_2063 Vitamin B12 import system permease protein BtuC K06073 btuC; vitamin B12 transport system permease protein
D PMPD1_2065 Vitamin B12 import ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D PMPD1_2544 zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D PMPD1_2546 zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D PMPD1_2545 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PMPD1_1241 zinc/manganese transport system substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PMPD1_1240 zinc/manganese transport system permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PMPD1_1239 zinc/manganese transport system ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PMPD1_0557 lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D PMPD1_0558 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D PMPD1_0485 lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMPD1_1843 lipoprotein-releasing ABC transporter permease subunit LolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D PMPD1_1845 lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein
D PMPD1_1844 lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PMPD1_3069 Heme exporter protein D K02196 ccmD; heme exporter protein D
D PMPD1_3070 Heme exporter protein C K02195 ccmC; heme exporter protein C
D PMPD1_3071 Heme exporter protein B K02194 ccmB; heme exporter protein B
D PMPD1_3072 cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PMPD1_0255 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PMPD1_0254 Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PMPD1_0916 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMPD1_1110 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMPD1_0915 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PMPD1_1109 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PMPD1_1278 Sugar ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PMPD1_1277 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PMPD1_2084 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PMPD1_3187 Bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PMPD1_2092 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D PMPD1_2690 EmmdR/YeeO family multidrug/toxin efflux MATE transporter K26937 dinF; MATE family, multidrug efflux pump
D PMPD1_4017 MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump
D PMPD1_3650 MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D PMPD1_1066 Arabinose-proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D PMPD1_1064 MFS transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D PMPD1_0775 L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PMPD1_3764 Fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PMPD1_0850 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D PMPD1_2919 Sugar transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D PMPD1_0233 glycine betaine/L-proline transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PMPD1_0801 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PMPD1_1791 Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PMPD1_2185 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PMPD1_4331 Shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D PMPD1_0685 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D PMPD1_3164 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PMPD1_0692 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D PMPD1_2874 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PMPD1_0017 D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D PMPD1_2768 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D PMPD1_2774 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PMPD1_0092 Hexose phosphate transport protein UhpT K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D PMPD1_4233 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PMPD1_0093 Hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMPD1_3238 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PMPD1_3588 Lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D PMPD1_1203 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PMPD1_2396 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PMPD1_2933 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PMPD1_2253 putative sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D PMPD1_2541 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D PMPD1_1147 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PMPD1_1787 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PMPD1_2948 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PMPD1_1799 MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D PMPD1_2095 MFS transporter K28371 punC; MFS transporter, DHA1 family, purine nucleoside transporter
D PMPD1_0981 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PMPD1_2689 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PMPD1_3604 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PMPD1_1074 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_1357 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_1574 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_3406 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_2432 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_2866 MFS transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D PMPD1_1261 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PMPD1_2154 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PMPD1_1648 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D PMPD1_0336 MFS transporter K06141 tsgA; MFS transporter, TsgA protein
D PMPD1_3452 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D PMPD1_3961 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PMPD1_3194 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PMPD1_3582 Phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D PMPD1_3193 Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PMPD1_0480 PTS phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D PMPD1_2918 phosphocarrier protein FPr K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D PMPD1_3195 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMPD1_1833 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMPD1_1425 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMPD1_2144 PTS maltose transporter subunit IICB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D PMPD1_2626 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PMPD1_3618 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PMPD1_1483 PTS system, trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PMPD1_3978 PTS system N-acetylmuramic acid transporter subunits IIBC K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PMPD1_2916 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PMPD1_1124 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D PMPD1_0116 PTS system, mannitol-specific enzyme IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMPD1_1128 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMPD1_0539 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMPD1_1134 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PMPD1_0538 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMPD1_1132 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PMPD1_0541 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PMPD1_1133 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PMPD1_1095 PTS system, glucitol/sorbitol-specific IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PMPD1_1096 PTS system, glucitol/sorbitol-specific IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PMPD1_1094 PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D PMPD1_0230 PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PMPD1_0228 PTS system, galactitol-specific IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PMPD1_0229 PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D PMPD1_2421 PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMPD1_2422 PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D PMPD1_2423 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D PMPD1_3013 PTS system, ascorbate-specific IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMPD1_3012 PTS system, ascorbate-specific IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMPD1_3011 PTS system, ascorbate-specific IIC component K03475 ulaA; ascorbate PTS system EIIC component
D PMPD1_0482 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PMPD1_4037 aquaporin Z K06188 aqpZ; aquaporin Z
D PMPD1_4116 Glycerol uptake facilitator GlpF K02440 glpF; glycerol uptake facilitator
D PMPD1_1222 ammonium transporter AmtB K03320 amt; ammonium transporter, Amt family
D PMPD1_0153 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_0163 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_2122 glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_3016 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_3997 Putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMPD1_0472 stringent starvation protein A K03599 sspA; stringent starvation protein A
D PMPD1_1706 FtsH protease modulator YccA K19416 yccA; modulator of FtsH protease
D PMPD1_1651 Formate transporter K06212 focA; formate transporter
D PMPD1_0413 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PMPD1_1525 Mechanosensitive ion channel protein K05802 mscK; potassium-dependent mechanosensitive channel
D PMPD1_3924 miniconductance mechanosensitive channel MscM K22051 mscM; miniconductance mechanosensitive channel
D PMPD1_3636 Mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D PMPD1_1561 Mechanosensitive channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D PMPD1_1173 Miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D PMPD1_3273 magnesium transporter K06213 mgtE; magnesium transporter
D PMPD1_0679 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_2579 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_0680 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_2578 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_3777 tol-pal system-associated acyl-CoA thioesterase K03561 exbB; biopolymer transport protein ExbB
D PMPD1_3776 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PMPD1_1462 Tol-Pal system protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D PMPD1_1463 Tol-Pal system protein TolR K03560 tolR; biopolymer transport protein TolR
D PMPD1_4243 Magnesium transport protein CorA K03284 corA; magnesium transporter
D PMPD1_2298 Zinc transport protein ZntB K16074 zntB; zinc transporter
D PMPD1_0182 Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D PMPD1_2027 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D PMPD1_3430 Magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMPD1_3888 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMPD1_1674 Porin OmpC K09476 ompF; outer membrane pore protein F
D PMPD1_1015 porin OmpC K11929 phoE; outer membrane pore protein E
D PMPD1_2960 Outer membrane porin OmpC K09475 ompC; outer membrane pore protein C
D PMPD1_4025 Maltoporin K02024 lamB; maltoporin
D PMPD1_1693 Porin OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PMPD1_1568 outer membrane protein OmpX K11934 ompX; outer membrane protein X
D PMPD1_3062 Long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein
D PMPD1_3960 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein
D PMPD1_0212 Pilus assembly protein PapC K07347 fimD; outer membrane usher protein
D PMPD1_3936 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_4347 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_4349 Autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D PMPD1_0045 Lipase K12686 apeE; outer membrane lipase/esterase
D PMPD1_2683 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D PMPD1_4088 Vitamin B12 transporter BtuB K16092 btuB; vitamin B12 transporter
D PMPD1_2787 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D PMPD1_3489 Outer membrane siderophore receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PMPD1_2073 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMPD1_3693 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMPD1_0055 iron complex outermembrane recepter protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMPD1_0930 Ferric hydroxamate outer membrane receptor FhuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMPD1_1776 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMPD1_1882 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMPD1_2205 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMPD1_3479 iron complex outermembrane recepter protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMPD1_2694 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_2963 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PMPD1_1756 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PMPD1_1575 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D PMPD1_2854 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PMPD1_0953 Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D PMPD1_3294 Outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D PMPD1_3252 Outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D PMPD1_3417 Outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D PMPD1_3351 Outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D PMPD1_3886 Membrane protein K07278 tamA; translocation and assembly module TamA
D PMPD1_3885 Translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB
D PMPD1_0486 lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D PMPD1_0487 lipopolysaccharide export system protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D PMPD1_0824 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D PMPD1_1406 LPS-assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D PMPD1_0143 cellulose synthase operon protein C K20543 bcsC; cellulose synthase operon protein C
D PMPD1_2391 MltA-interacting protein MipA K07274 mipA; MipA family protein
D PMPD1_1414 CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D PMPD1_1902 CidA/LrgA family protein K06518 cidA; holin-like protein
D PMPD1_2892 murein hydrolase regulator LrgA K06518 cidA; holin-like protein
D PMPD1_3993 Antiholin-like protein LrgA K06518 cidA; holin-like protein
D PMPD1_2912 lysine-specific permease K11733 lysP; lysine-specific permease
D PMPD1_0887 aromatic amino acid transporter AroP K11734 aroP; aromatic amino acid transport protein AroP
D PMPD1_1172 Proline-specific permease ProY K11736 proY; proline-specific permease ProY
D PMPD1_1714 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PMPD1_3241 L-asparagine permease K11738 ansP; L-asparagine permease
D PMPD1_2278 Arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PMPD1_3231 Amino acid permease K28029 UGA4; amino acid or GABA permease
D PMPD1_1472 Zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PMPD1_4126 Cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D PMPD1_2692 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D PMPD1_1244 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PMPD1_3245 Efflux pump membrane transporter K18324 acrD; multidrug efflux pump
D PMPD1_2233 multidrug efflux RND transporter permease subunit OqxB K19585 oqxB; multidrug efflux pump
D PMPD1_2864 Multidrug resistance protein MdtB K07788 mdtB; multidrug efflux pump
D PMPD1_2865 Multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump
D PMPD1_0021 O-acetylserine/cysteine efflux transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D PMPD1_1567 Threonine transporter K11939 rhtA; inner membrane transporter RhtA
D PMPD1_2165 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PMPD1_3832 gluconate permease K06157 idnT; Gnt-II system L-idonate transporter
D PMPD1_0288 Gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D PMPD1_2327 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D PMPD1_2806 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D PMPD1_3944 Anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PMPD1_2124 Choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D PMPD1_2126 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D PMPD1_0118 Tellurite resistance protein TehA K03304 tehA; tellurite resistance protein
D PMPD1_2014 Calcium/proton exchanger K07300 chaA; Ca2+:H+ antiporter
D PMPD1_0490 Calcium/sodium:proton antiporter K07301 yrbG; cation:H+ antiporter
D PMPD1_0203 Phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter
D PMPD1_0441 Sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter
D PMPD1_2606 sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D PMPD1_3983 Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D PMPD1_3980 Proton/glutamate-aspartate symporter K11102 gltP; proton glutamate symport protein
D PMPD1_0147 aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D PMPD1_3842 Serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D PMPD1_0804 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D PMPD1_3995 Sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PMPD1_0185 Sodium:proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D PMPD1_2394 K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter
D PMPD1_0366 Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D PMPD1_0365 Glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D PMPD1_1260 Cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter
D PMPD1_4211 Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D PMPD1_0414 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PMPD1_0235 cytosine permease K10974 codB; cytosine permease
D PMPD1_3261 Uracil permease K02824 uraA; uracil permease
D PMPD1_4189 Xanthine permease XanP K16345 xanP; xanthine permease XanP
D PMPD1_2710 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMPD1_3996 Inner membrane protein YjcD K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMPD1_4339 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMPD1_3178 Nucleoside permease K11535 nupC; nucleoside transport protein
D PMPD1_1605 Serine/threonine protein kinase K03837 sdaC; serine transporter
D PMPD1_1269 anion permease K11106 ttdT; L-tartrate/succinate antiporter
D PMPD1_1977 Tartrate transporter K11106 ttdT; L-tartrate/succinate antiporter
D PMPD1_0935 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D PMPD1_3839 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D PMPD1_4327 hypothetical protein K07240 chrA; chromate transporter
D PMPD1_4328 hypothetical protein K07240 chrA; chromate transporter
D PMPD1_1750 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D PMPD1_3177 Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D PMPD1_3778 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D PMPD1_3779 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D PMPD1_3780 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D PMPD1_4039 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D PMPD1_4261 Lipid III flippase K16693 wzxE; enterobacterial common antigen flippase
D PMPD1_2843 MOP flippase family protein K16695 wzxC; lipopolysaccharide exporter
D PMPD1_1802 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D PMPD1_4297 Low affinity potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D PMPD1_3635 Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PMPD1_4237 Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D PMPD1_0817 LysE family translocator K05835 rhtC; threonine efflux protein
D PMPD1_3755 LysE family translocator K05835 rhtC; threonine efflux protein
D PMPD1_4238 Threonine efflux protein K05835 rhtC; threonine efflux protein
D PMPD1_1541 Leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D PMPD1_3402 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D PMPD1_3403 L-valine transporter subunit YgaH K26606 azlD; branched chain amino acid efflux pump
D PMPD1_4323 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D PMPD1_4324 Tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMPD1_4322 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D PMPD1_0459 p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D PMPD1_3256 AI-2E family transporter K03548 perM; putative permease
D PMPD1_0246 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D PMPD1_1145 MarC family NAAT transporter K05595 marC; multiple antibiotic resistance protein
D PMPD1_0866 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D PMPD1_0178 Putative manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D PMPD1_2425 manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D PMPD1_2605 Ferrous iron transport permease EfeU K07243 FTR; high-affinity iron transporter
D PMPD1_2604 iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D PMPD1_2603 Deferrochelatase/peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D PMPD1_3316 nickel/cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D PMPD1_2323 carbon starvation protein A K06200 cstA; carbon starvation protein
D PMPD1_1631 hypothetical protein K28370 lysO; lysine exporter
D PMPD1_2358 TonB system transport protein TonB K03832 tonB; periplasmic protein TonB
D PMPD1_1466 peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D PMPD1_1464 cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D PMPD1_1465 Tol-Pal system protein TolB K03641 tolB; TolB protein
D PMPD1_1141 Protein-disulfide reductase K08344 scsB; suppressor for copper-sensitivity B
D PMPD1_3237 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3236 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3234 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PMPD1_3501 Formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D PMPD1_3502 Formate dehydrogenase N beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D PMPD1_3503 Formate dehydrogenase N gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D PMPD1_2887 Trimethylamine N-oxide reductase I cytochrome c-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PMPD1_2888 Trimethylamine N-oxide reductase I catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMPD1_3591 molybdopterin-dependent oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D PMPD1_1358 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D PMPD1_1573 Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D PMPD1_3405 MFS transporter K03543 emrA; membrane fusion protein, multidrug efflux system
D PMPD1_3862 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PMPD1_2693 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D PMPD1_2961 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D PMPD1_1104 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D PMPD1_1245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PMPD1_1485 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D PMPD1_2232 Efflux transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system
D PMPD1_2863 Multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D PMPD1_3198 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PMPD1_0458 p-hydroxybenzoic acid efflux pump subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D PMPD1_2852 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PMPD1_3855 hypothetical protein K28369 dolP; outer membrane lipoprotein DolP
D PMPD1_1471 Nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D PMPD1_0309 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PMPD1_0308 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PMPD1_3969 peptide antibiotic transporter SbmA K17938 sbmA; peptide/bleomycin uptake transporter
D PMPD1_1686 membrane integrity-associated transporter subunit PqiA K03808 pqiA; intermembrane transport protein PqiA/LetA
D PMPD1_2437 Membrane protein K03808 pqiA; intermembrane transport protein PqiA/LetA
D PMPD1_1687 intermembrane transport protein PqiB K06192 pqiB; intermembrane transport protein PqiB/LetB
D PMPD1_2438 PqiB family protein K06192 pqiB; intermembrane transport protein PqiB/LetB
D PMPD1_1688 membrane integrity-associated transporter subunit PqiC K09857 pqiC; intermembrane transport lipoprotein PqiC
D PMPD1_0202 Universal stress protein B K06144 uspB; universal stress protein B
D PMPD1_3930 entericidin B K16348 ecnB; entericidin B
D PMPD1_3067 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PMPD1_2292 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PMPD1_2527 copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D
D PMPD1_2528 CopC domain-containing protein YobA K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:pmak02044]
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_3863 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D PMPD1_3862 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D PMPD1_2962 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D PMPD1_2961 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D PMPD1_2963 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D PMPD1_1104 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D PMPD1_1103 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D PMPD1_3299 Pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PMPD1_3657 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D PMPD1_3534 Type IV prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PMPD1_3710 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PMPD1_3711 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PMPD1_3532 Type II/IV secretion system secretin K02280 cpaC; pilus assembly protein CpaC
D PMPD1_3712 secretin K02280 cpaC; pilus assembly protein CpaC
D PMPD1_3530 Type II/IV secretion system ATPase K02282 cpaE; pilus assembly protein CpaE
D PMPD1_3714 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PMPD1_3529 Type II/IV secretion system ATP hydrolase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMPD1_3715 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMPD1_3528 Flp pilus assembly protein K12510 tadB; tight adherence protein B
D PMPD1_3716 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PMPD1_3527 type II secretion system F family protein K12511 tadC; tight adherence protein C
D PMPD1_3717 Type II/IV secretion system protein TadC K12511 tadC; tight adherence protein C
D PMPD1_3526 hypothetical protein K12512 tadD; tight adherence protein D
D PMPD1_3718 Flp pilus assembly protein TadD K12512 tadD; tight adherence protein D
D PMPD1_3525 hypothetical protein K12513 tadE; tight adherence protein E
D PMPD1_3719 Flp pilus assembly membrane protein TadE K12513 tadE; tight adherence protein E
D PMPD1_3524 hypothetical protein K12514 tadF; tight adherence protein F
D PMPD1_3720 flp pilus assembly surface protein TadF K12514 tadF; tight adherence protein F
D PMPD1_3522 pilus assembly protein K12515 tadG; tight adherence protein G
D PMPD1_3722 protein TadG K12515 tadG; tight adherence protein G
D PMPD1_3535 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PMPD1_3709 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PMPD1_3573 prepilin peptidase dependent protein A K02679 ppdA; prepilin peptidase dependent protein A
D PMPD1_3572 prepilin peptidase dependent protein B K02680 ppdB; prepilin peptidase dependent protein B
D PMPD1_3570 prepilin peptidase dependent protein C K02681 ppdC; prepilin peptidase dependent protein C
D PMPD1_0883 Prepilin peptidase-dependent pilin K02682 ppdD; prepilin peptidase dependent protein D
D PMPD1_0882 type II secretion system protein GspE K02504 hofB; protein transport protein HofB
D PMPD1_0881 protein transport protein HofC K02505 hofC; protein transport protein HofC
D PMPD1_0321 pilus assembly protein HofM K12288 hofM; pilus assembly protein HofM
D PMPD1_0322 pilus assembly protein HofN K12289 hofN; pilus assembly protein HofN
D PMPD1_0323 pilus assembly protein HofO K12290 hofO; pilus assembly protein HofO
D PMPD1_0324 protein transport protein HofQ K02507 hofQ; protein transport protein HofQ
D PMPD1_3659 YggT family protein K02221 yggT; YggT family protein
D PMPD1_1212 AraC family transcriptional regulator K02237 comEA; competence protein ComEA
D PMPD1_1658 Competence protein ComEC K02238 comEC; competence protein ComEC
D PMPD1_1371 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C
D PMPD1_1382 type III secretion protein D K03220 yscD; type III secretion protein D
D PMPD1_1366 hypothetical protein K04053 yscI; type III secretion protein I
D PMPD1_1367 type III secretion protein J K03222 yscJ; type III secretion protein J
D PMPD1_1369 HrpE/YscL family type III secretion apparatus protein K03223 yscL; type III secretion protein L
D PMPD1_1381 Type III secretion cytoplasmic ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D PMPD1_1380 hypothetical protein K04056 yscO; type III secretion protein O
D PMPD1_1378 type III secretion protein Q K03225 yscQ; type III secretion protein Q
D PMPD1_1377 type III secretion protein R K03226 yscR; type III secretion protein R
D PMPD1_1376 type III secretion protein S K03227 yscS; type III secretion protein S
D PMPD1_1375 type III secretion protein T K03228 yscT; type III secretion protein T
D PMPD1_1374 type III secretion protein U K03229 yscU; type III secretion protein U
D PMPD1_1383 type III secretion protein V K03230 yscV; type III secretion protein V
D PMPD1_1384 type III secretion protein W K04058 yscW; type III secretion protein W
D PMPD1_0629 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PMPD1_2568 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PMPD1_0630 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PMPD1_2569 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PMPD1_0638 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PMPD1_2634 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PMPD1_0640 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D PMPD1_2636 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D PMPD1_0641 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMPD1_2637 Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMPD1_0634 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_2642 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_2643 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PMPD1_0633 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PMPD1_2644 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PMPD1_0632 Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PMPD1_2645 Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PMPD1_0631 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PMPD1_2646 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PMPD1_4390 IncF plasmid conjugative transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D PMPD1_4397 IncF plasmid conjugative transfer pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D PMPD1_4398 IncF plasmid conjugative transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D PMPD1_4399 IncF plasmid conjugative transfer protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D PMPD1_4400 IncF plasmid conjugative transfer pilus assembly protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D PMPD1_4403 IncF plasmid conjugative transfer pilus assembly protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D PMPD1_4404 IncF plasmid conjugative transfer protein TrbI K28223 trbI; conjugal transfer pilus assembly protein TrbI
D PMPD1_4405 IncF plasmid conjugative transfer pilus assembly protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D PMPD1_4406 IncF plasmid conjugative transfer pilus assembly protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D PMPD1_4410 conjugal transfer pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D PMPD1_4411 conjugal transfer pilus assembly protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D PMPD1_4412 conjugal transfer pilus assembly protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D PMPD1_4413 conjugal transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D PMPD1_3610 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMPD1_4391 IncF plasmid conjugative transfer pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D PMPD1_4349 Autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin
D PMPD1_0045 Lipase K12686 apeE; outer membrane lipase/esterase
D PMPD1_0705 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PMPD1_2022 type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D PMPD1_2743 type VI secretion system protein ImpL K11891 impL; type VI secretion system protein ImpL
D PMPD1_0704 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PMPD1_2023 OmpA family protein K11892 impK; type VI secretion system protein ImpK
D PMPD1_2758 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK
D PMPD1_0703 type VI secretion system protein ImpJ K11893 impJ; type VI secretion system protein ImpJ
D PMPD1_2759 type VI secretion system protein ImpJ K11893 impJ; type VI secretion system protein ImpJ
D PMPD1_0726 type VI secretion system protein ImpH K11895 impH; type VI secretion system protein ImpH
D PMPD1_2740 type VI secretion system protein ImpH K11895 impH; type VI secretion system protein ImpH
D PMPD1_0725 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG
D PMPD1_2741 type VI secretion system protein ImpG K11896 impG; type VI secretion system protein ImpG
D PMPD1_0724 type VI secretion system protein ImpF K11897 impF; type VI secretion system protein ImpF
D PMPD1_0709 type VI secretion system protein ImpC K11900 impC; type VI secretion system protein ImpC
D PMPD1_2760 type VI secretion system protein ImpC K11900 impC; type VI secretion system protein ImpC
D PMPD1_0708 type VI secretion system protein ImpB K11901 impB; type VI secretion system protein ImpB
D PMPD1_2761 type VI secretion system protein ImpB K11901 impB; type VI secretion system protein ImpB
D PMPD1_0707 type VI secretion system protein ImpA K11902 impA; type VI secretion system protein ImpA
D PMPD1_0090 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0108 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0710 type VI secretion system secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0713 type VI secretion system secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_1587 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_1601 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_1866 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2224 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2445 Type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2696 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_2756 type VI secretion system secreted protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_3645 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_4067 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D PMPD1_0262 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0273 type VI secretion system secreted protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0729 Type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_0829 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_1528 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_2749 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D PMPD1_2738 type VI secretion system protein TssE K11905 K11905; type VI secretion system protein
D PMPD1_0702 type VI secretion system protein VasD K11906 vasD; type VI secretion system protein VasD
D PMPD1_2739 type VI secretion system protein VasD K11906 vasD; type VI secretion system protein VasD
D PMPD1_0727 type VI secretion system protein VasG K11907 vasG; type VI secretion system protein VasG
D PMPD1_2755 type VI secretion system protein VasG K11907 vasG; type VI secretion system protein VasG
D PMPD1_2742 type VI secretion system protein VasJ K11910 vasJ; type VI secretion system protein VasJ
D PMPD1_2737 type VI secretion system protein VasL K11911 vasL; type VI secretion system protein VasL
D PMPD1_0706 type VI secretion system protein ImpM K11890 impM; type VI secretion system protein ImpM
D PMPD1_2021 type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D PMPD1_0723 type VI secretion system protein ImpE K11898 impE; type VI secretion system protein ImpE
D PMPD1_0211 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0214 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0215 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0216 type 1 fimbrial protein major subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_4345 Type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_4348 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0212 Pilus assembly protein PapC K07347 fimD; outer membrane usher protein
D PMPD1_3936 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_4347 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_3949 CFA/I fimbrial major subunit K21964 ecpA; Mat/Ecp fimbriae major subunit
D PMPD1_3950 CFA/I fimbrial auxiliary subunit K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D PMPD1_3725 Mat/Ecp fimbriae outer membrane usher protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D PMPD1_3951 Fimbrial biogenesis outer membrane usher protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D PMPD1_3952 CFA/I fimbrial minor adhesin K21967 ecpD; Mat/Ecp fimbriae adhesin
D PMPD1_3953 CFA/I fimbrial chaperone K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D PMPD1_0875 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMPD1_4135 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D PMPD1_1179 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PMPD1_4080 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMPD1_1180 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PMPD1_0514 Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PMPD1_0874 Secretion monitor precursor protein K13301 secM; secretion monitor
D PMPD1_0404 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMPD1_3428 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMPD1_0253 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D PMPD1_1178 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMPD1_4351 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMPD1_4222 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PMPD1_4221 Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D PMPD1_4220 Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PMPD1_1394 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:pmak02042]
D PMPD1_3430 Magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMPD1_3888 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMPD1_3616 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pmak02022]
D PMPD1_1169 phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMPD1_1168 phosphate response regulator transcription factor PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMPD1_1853 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMPD1_1854 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMPD1_0314 Two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D PMPD1_0313 Transcriptional regulatory protein OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D PMPD1_2281 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D PMPD1_2280 two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA
D PMPD1_4131 envelope stress sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMPD1_4130 envelope stress response regulator transcription factor CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMPD1_2867 two-component system sensor histidine kinase BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D PMPD1_2868 two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D PMPD1_0504 two-component system sensor histidine kinase PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D PMPD1_0505 two-component system response regulator PmrA K07771 basR; two-component system, OmpR family, response regulator BasR
D PMPD1_1974 Two-component system sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PMPD1_1975 two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PMPD1_0477 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMPD1_0791 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PMPD1_3196 Two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PMPD1_2794 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PMPD1_3197 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D PMPD1_3239 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D PMPD1_3240 two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PMPD1_3243 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PMPD1_3244 DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PMPD1_0094 Sensor histidine protein kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PMPD1_0095 Transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PMPD1_2966 Phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D PMPD1_1106 response regulator transcription factor K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PMPD1_2967 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D PMPD1_3546 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D PMPD1_1719 Two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D PMPD1_3934 Histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D PMPD1_3933 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D PMPD1_3171 Sensor histidine kinase K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3]
D PMPD1_3172 LytTR family transcriptional regulator K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator
D PMPD1_4197 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D PMPD1_4198 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D PMPD1_3325 HAMP domain-containing histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D PMPD1_3323 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR
D PMPD1_2577 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMPD1_2571 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMPD1_2572 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMPD1_2376 two-component system response regulator RssB K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:pmak02035]
D PMPD1_2577 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PMPD1_2576 Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D PMPD1_2573 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PMPD1_2572 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PMPD1_2571 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PMPD1_2570 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D PMPD1_1360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_1532 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_2264 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D PMPD1_1063 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_2575 Methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_3881 Methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D PMPD1_2648 Methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D PMPD1_2574 Methyl-accepting chemotaxis protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D PMPD1_3977 Aerotaxis receptor Aer K03776 aer; aerotaxis receptor
D PMPD1_0640 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D PMPD1_2636 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D PMPD1_0641 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMPD1_2637 Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PMPD1_2638 flagella biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D PMPD1_2643 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D PMPD1_0633 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PMPD1_2644 Flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D PMPD1_0632 Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PMPD1_2645 Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PMPD1_0631 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PMPD1_2646 Flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D PMPD1_0629 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PMPD1_2568 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D PMPD1_0630 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PMPD1_2569 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D PMPD1_2567 Flagellar protein FlhE K03516 flhE; flagellar protein FlhE
D PMPD1_0639 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PMPD1_2635 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D PMPD1_0635 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PMPD1_2641 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D PMPD1_0634 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_2642 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D PMPD1_0638 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D PMPD1_2634 Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PMPD1_0665 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D PMPD1_1813 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D PMPD1_0657 Flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PMPD1_1805 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D PMPD1_0664 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D PMPD1_1812 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D PMPD1_0677 Flagellar protein FliL K02415 fliL; flagellar protein FliL
D PMPD1_2640 Flagellar protein FliL K02415 fliL; flagellar protein FliL
D PMPD1_0637 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PMPD1_2633 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PMPD1_0676 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PMPD1_2639 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D PMPD1_0658 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PMPD1_1806 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D PMPD1_0659 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PMPD1_1807 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D PMPD1_0660 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D PMPD1_1808 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D PMPD1_0662 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PMPD1_1810 Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D PMPD1_0663 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PMPD1_1811 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D PMPD1_0666 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PMPD1_1814 flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D PMPD1_0661 Flagellar basal body protein FlaE K02390 flgE; flagellar hook protein FlgE
D PMPD1_1809 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D PMPD1_0667 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PMPD1_1815 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D PMPD1_0668 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PMPD1_1816 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D PMPD1_0655 flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PMPD1_1803 Flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D PMPD1_0644 tRNA-ribosyltransferase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D PMPD1_0672 flagellin K02406 fliC; flagellin
D PMPD1_2615 Flagellin K02406 fliC; flagellin
D PMPD1_0673 Flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D PMPD1_2616 Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D PMPD1_0674 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D PMPD1_2617 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D PMPD1_2618 flagellar protein FliT K02423 fliT; flagellar protein FliT
D PMPD1_2581 Flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D PMPD1_2580 Flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D PMPD1_0678 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_2613 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D PMPD1_0679 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_2579 Flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D PMPD1_0680 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_2578 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D PMPD1_2610 Cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PMPD1_2612 flagella biosynthesis regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D PMPD1_0656 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMPD1_1804 Flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D PMPD1_3657 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D PMPD1_3299 Pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PMPD1_3535 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PMPD1_3709 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D PMPD1_3534 Type IV prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PMPD1_3710 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PMPD1_3711 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D PMPD1_3532 Type II/IV secretion system secretin K02280 cpaC; pilus assembly protein CpaC
D PMPD1_3712 secretin K02280 cpaC; pilus assembly protein CpaC
D PMPD1_3530 Type II/IV secretion system ATPase K02282 cpaE; pilus assembly protein CpaE
D PMPD1_3714 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D PMPD1_3529 Type II/IV secretion system ATP hydrolase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMPD1_3715 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMPD1_0211 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0214 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0215 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0216 type 1 fimbrial protein major subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_4345 Type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_4348 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D PMPD1_0212 Pilus assembly protein PapC K07347 fimD; outer membrane usher protein
D PMPD1_3936 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D PMPD1_4347 Fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pmak04812]
D PMPD1_0450 Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PMPD1_0872 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMPD1_0871 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PMPD1_2406 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PMPD1_2407 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D PMPD1_2408 Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D PMPD1_4455 Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PMPD1_2522 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PMPD1_4454 Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pmak04147]
D PMPD1_1253 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PMPD1_3541 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_4319 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMPD1_0061 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_2389 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMPD1_3638 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMPD1_2090 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_2537 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMPD1_0337 Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PMPD1_0222 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PMPD1_1174 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PMPD1_3938 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMPD1_0802 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PMPD1_4034 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMPD1_3288 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMPD1_0379 Elongation factor Tu K02358 tuf; elongation factor Tu
D PMPD1_4081 Elongation factor Tu K02358 tuf; elongation factor Tu
D PMPD1_1834 purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMPD1_3187 Bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PMPD1_2410 Long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D PMPD1_1257 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMPD1_1249 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMPD1_4094 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMPD1_4095 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMPD1_3880 class 1 Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMPD1_1477 Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMPD1_0293 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMPD1_3461 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMPD1_3675 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMPD1_4117 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMPD1_4196 Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMPD1_0232 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMPD1_0569 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_3630 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMPD1_4053 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMPD1_0891 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMPD1_2535 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMPD1_4122 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMPD1_1475 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_4320 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMPD1_1303 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pmak02048]
D PMPD1_0897 type I-F CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PMPD1_0898 type I-F CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PMPD1_0899 type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D PMPD1_0900 type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D PMPD1_0901 type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D PMPD1_0902 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D PMPD1_0602 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PMPD1_0605 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PMPD1_0600 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PMPD1_0606 Type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PMPD1_0328 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMPD1_4443 Methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PMPD1_2659 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PMPD1_4423 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D PMPD1_4424 Antitoxin ChpS K18842 chpS; antitoxin ChpS
D PMPD1_0161 mRNA interferase toxin RelE K06218 relE; mRNA interferase RelE/StbE
D PMPD1_0162 Bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D PMPD1_1594 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PMPD1_1593 helix-turn-helix transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D PMPD1_2307 Phage shock protein C K03973 pspC; phage shock protein C
D PMPD1_2308 Phage shock protein B K03970 pspB; phage shock protein B
D PMPD1_1946 Plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D PMPD1_1945 antitoxin CcdA K19164 ccdA; antitoxin CcdA
D PMPD1_0067 Addiction module antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D PMPD1_1775 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D PMPD1_1774 Helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PMPD1_0205 tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D PMPD1_0206 hypothetical protein K18829 mvpT; antitoxin VapB
D PMPD1_0731 hypothetical protein K28300 tsi6; immune protein Tsi6
D PMPD1_1793 Transcriptional regulator K12148 bssS; biofilm regulator BssS
D PMPD1_2255 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D PMPD1_2256 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D PMPD1_2796 DUF1471 domain-containing protein K12151 bhsA; multiple stress resistance protein BhsA
D PMPD1_0872 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMPD1_0450 Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PMPD1_3788 DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMPD1_3792 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMPD1_3184 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMPD1_1046 toxin K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D PMPD1_3374 toxin K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D PMPD1_1045 type IV toxin-antitoxin system YeeU family antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D PMPD1_3373 Type IV toxin-antitoxin system YeeU family antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D PMPD1_3613 hypothetical protein K19168 cptA; toxin CptA
D PMPD1_3614 FAD assembly factor SdhE K09159 cptB; antitoxin CptB
D PMPD1_1236 Hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein
D PMPD1_1237 Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB
D PMPD1_3312 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:pmak04052]
D PMPD1_0363 nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pmak01504]
D PMPD1_2541 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D PMPD1_3574 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PMPD1_1853 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D PMPD1_1854 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D PMPD1_1245 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PMPD1_1244 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D PMPD1_1756 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D PMPD1_1271 Transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D PMPD1_1105 TolC family outer membrane protein K12340 tolC; outer membrane protein
D PMPD1_3798 outer membrane channel protein TolC K12340 tolC; outer membrane protein
D PMPD1_3933 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D PMPD1_0432 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D PMPD1_2231 Helix-turn-helix domain protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D PMPD1_1674 Porin OmpC K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pmak00536]
D PMPD1_1291 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pmak00537]
D PMPD1_1883 alpha,alpha-trehalase TreA K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D PMPD1_0222 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:pmak03200]
D PMPD1_1729 Phage lysin K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
D PMPD1_3098 lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pmak03100]
D PMPD1_R005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R096 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMPD1_R027 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R073 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R107 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMPD1_R052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMPD1_R053 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMPD1_R054 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMPD1_R024 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMPD1_R025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMPD1_R110 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMPD1_R043 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PMPD1_R030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R033 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R034 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMPD1_R069 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R088 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R102 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R113 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMPD1_R029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R082 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R083 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R084 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R091 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMPD1_R106 tRNA-His K14226 tRNA-His; tRNA His
D PMPD1_R004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMPD1_R020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMPD1_R097 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMPD1_R011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMPD1_R028 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R037 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R064 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMPD1_R012 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R032 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R036 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R075 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R076 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R079 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMPD1_R078 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMPD1_R085 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMPD1_R002 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMPD1_R055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMPD1_R104 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMPD1_R040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R041 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R051 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R074 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMPD1_R008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R026 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R058 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R090 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R093 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMPD1_R109 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PMPD1_R048 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMPD1_R092 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMPD1_R045 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R046 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R047 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R061 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R062 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R063 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMPD1_R001 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PMPD1_R003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R089 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R098 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R103 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R114 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMPD1_R006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R022 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R068 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R087 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R101 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R112 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMPD1_R007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R023 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R067 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R086 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R094 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R111 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMPD1_R080 Bacterial RNase P class A K01978 rnpB; RNase P catalytic RNA component
D PMPD1_R066 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D PMPD1_R077 6S / SsrS RNA K28358 ssrS; RNA polymerase binding 6S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PMPD1_3833 Gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D PMPD1_3834 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D PMPD1_2674 Histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D PMPD1_4176 Histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D PMPD1_3785 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PMPD1_0979 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D PMPD1_2703 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D PMPD1_2804 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D PMPD1_0561 D-erythronate 2-dehydrogenase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D PMPD1_2700 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D PMPD1_3175 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PMPD1_4330 Aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PMPD1_3216 Erythritol/L-threitol dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D PMPD1_1602 Oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D PMPD1_1189 Aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D PMPD1_3454 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D PMPD1_3835 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D PMPD1_1493 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D PMPD1_0224 pyrroloquinoline quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D PMPD1_1792 N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D PMPD1_0070 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PMPD1_4012 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PMPD1_3789 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D PMPD1_2286 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PMPD1_2686 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PMPD1_1115 peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMPD1_2597 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMPD1_3887 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMPD1_1113 peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PMPD1_2388 peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PMPD1_3017 GSH-dependent disulfide bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PMPD1_3954 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D PMPD1_3852 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D PMPD1_0447 methionine sulfoxide reductase catalytic subunit K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PMPD1_2252 superoxide oxidase K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D PMPD1_3255 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMPD1_2302 Thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMPD1_0122 Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PMPD1_3205 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PMPD1_0285 Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PMPD1_3181 Cysteine dioxygenase type I protein K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D PMPD1_3321 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PMPD1_2539 lysine N6-hydroxylase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D PMPD1_2218 long-chain alkane monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D PMPD1_3386 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D PMPD1_3763 Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PMPD1_0911 Multicopper oxidase K14588 cueO; cuproxidase [EC:1.16.3.4]
D PMPD1_4119 Ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PMPD1_3259 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PMPD1_0226 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D PMPD1_0535 anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PMPD1_1649 Pyruvate formate-lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PMPD1_1629 NADH oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D PMPD1_3499 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PMPD1_1309 Class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PMPD1_2094 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PMPD1_3441 Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D PMPD1_3270 tellurite methyltransferase K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D PMPD1_3695 heme anaerobic degradation radical SAM methyltransferase K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D PMPD1_1782 Glucans biosynthesis protein C K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D PMPD1_2201 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D PMPD1_1413 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PMPD1_0530 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PMPD1_0553 Acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D PMPD1_1896 GNAT family N-acetyltransferase K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-]
D PMPD1_1639 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PMPD1_3409 DTW domain-containing protein YfiP K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D PMPD1_3581 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PMPD1_1978 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PMPD1_2956 FAD:protein FMN transferase ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PMPD1_0565 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D PMPD1_2702 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D PMPD1_2805 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D PMPD1_3486 aminoimidazole riboside kinase K23147 E2.7.1.223; aminoimidazole riboside kinase [EC:2.7.1.223]
D PMPD1_2076 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PMPD1_3809 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PMPD1_2068 Protein adenylyltransferase K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PMPD1_0681 Phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D PMPD1_4048 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D PMPD1_1461 acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PMPD1_1766 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PMPD1_2024 Acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PMPD1_2440 protein phosphatase 1 K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D PMPD1_2345 3',5'-nucleoside bisphosphate phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PMPD1_3058 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PMPD1_0237 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PMPD1_2927 cyclic di-GMP phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PMPD1_0146 Biofilm formation regulator HmsP K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PMPD1_3271 Membrane protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D PMPD1_3652 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D PMPD1_0760 Deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMPD1_1832 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMPD1_4219 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMPD1_1433 Acyl-CoA esterase K01175 ybfF; esterase [EC:3.1.-.-]
D PMPD1_1013 esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-]
D PMPD1_0145 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D PMPD1_2478 Phage endolysin K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMPD1_3099 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMPD1_1970 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D PMPD1_2586 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D PMPD1_0417 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PMPD1_0544 2-iminobutanoate/2-iminopropanoate deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PMPD1_3810 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D PMPD1_1216 HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D PMPD1_3230 GDP-mannose pyrophosphatase NudK K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D PMPD1_1819 7-methyl-GTP pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D PMPD1_4298 ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PMPD1_0564 3-dehydro-4-phosphotetronate decarboxylase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D PMPD1_3919 Multifunctional fusion protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PMPD1_3559 Cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D PMPD1_4244 Cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D PMPD1_3765 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D PMPD1_0563 2-dehydrotetronate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D PMPD1_3879 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PMPD1_2133 Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PMPD1_2134 Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PMPD1_2135 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PMPD1_0248 zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PMPD1_0905 Magnesium ABC transporter ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D PMPD1_0926 sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D PMPD1_0104 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D PMPD1_2975 2Fe-2S ferredoxin K11107 yfaE; ferredoxin
D PMPD1_2132 Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PMPD1_2131 Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PMPD1_2136 Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PMPD1_4302 FMN-binding protein MioC K06205 mioC; MioC protein
D PMPD1_3612 Flavodoxin K03840 fldB; flavodoxin II
D PMPD1_3311 Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D PMPD1_3876 Cytochrome B562 K15536 cybC; soluble cytochrome b562
D PMPD1_1431 Flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
D PMPD1_3904 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D PMPD1_3395 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D PMPD1_0963 VOC family protein K08234 yaeR; glyoxylase I family protein
D PMPD1_2300 Murein peptide amidase A K14054 mpaA; murein peptide amidase A
D PMPD1_3658 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PMPD1_2332 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D PMPD1_2331 Lipopolysaccharide assembly protein B K19804 lapB; lipopolysaccharide assembly protein B
D PMPD1_1509 UPF0104 family protein K07027 K07027; glycosyltransferase 2 family protein
D PMPD1_0142 cellulose synthase operon protein B K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D PMPD1_4257 Protoheme IX biogenesis protein K02498 hemY; HemY protein
D PMPD1_4223 ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D PMPD1_4224 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PMPD1_3807 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PMPD1_4208 molybdopterin-guanine dinucleotide biosynthesis adapter protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D PMPD1_3786 Cell division protein FtsP K04753 sufI; suppressor of ftsI
C 99999 Others
D PMPD1_2265 DoxX family protein K15977 K15977; putative oxidoreductase
D PMPD1_3851 Inner membrane protein yqjF K15977 K15977; putative oxidoreductase
D PMPD1_3410 Protein acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PMPD1_0460 hypothetical protein K03623 yhcO; ribonuclease inhibitor
D PMPD1_2229 Ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D PMPD1_1146 RNA chaperone/antiterminator CspA K03704 cspA; cold shock protein
D PMPD1_1391 Cold shock-like protein CspE K03704 cspA; cold shock protein
D PMPD1_1633 Cold shock-like protein cspD K03704 cspA; cold shock protein
D PMPD1_2427 Cold shock protein CspC K03704 cspA; cold shock protein
D PMPD1_4061 sigma D regulator K07740 rsd; regulator of sigma D
D PMPD1_1221 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D PMPD1_0311 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D PMPD1_1634 ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PMPD1_1206 Trigger factor K03545 tig; trigger factor
D PMPD1_0446 methionine sulfoxide reductase heme-binding subunit K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PMPD1_0099 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D PMPD1_3354 SsrA-binding protein K03664 smpB; SsrA-binding protein
D PMPD1_3394 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D PMPD1_4284 magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
D PMPD1_0344 OsmC family protein K07397 yhfA; putative redox protein
D PMPD1_0305 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D PMPD1_1923 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D PMPD1_1225 methylated-DNA--[protein]-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PMPD1_3554 Flap endonuclease Xni K01146 xni; protein Xni
D PMPD1_1043 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PMPD1_3371 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PMPD1_4161 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D PMPD1_4226 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D PMPD1_1632 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PMPD1_3857 YraN family protein K07460 yraN; putative endonuclease
D PMPD1_0531 putative endonuclease K07461 K07461; putative endonuclease
D PMPD1_0418 DNA processing protein DprA K04096 smf; DNA processing protein
D PMPD1_1646 Recombination factor protein RarA K07478 ycaJ; putative ATPase
D PMPD1_0420 Putative DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D PMPD1_0591 AAA family ATPase K06919 K06919; putative DNA primase/helicase
D PMPD1_0065 Transposase K07483 K07483; transposase
D PMPD1_0089 Transposase K07483 K07483; transposase
D PMPD1_0651 Transposase K07483 K07483; transposase
D PMPD1_1052 Transposase K07483 K07483; transposase
D PMPD1_1054 Transposase K07483 K07483; transposase
D PMPD1_1300 Transposase K07483 K07483; transposase
D PMPD1_3368 Transposase K07483 K07483; transposase
D PMPD1_3378 transposase K07483 K07483; transposase
D PMPD1_4359 Transposase K07483 K07483; transposase
D PMPD1_4361 Transposase K07486 K07486; transposase
D PMPD1_4021 Transposase K07491 rayT; REP-associated tyrosine transposase
D PMPD1_0064 putative transposase K07497 K07497; putative transposase
D PMPD1_0088 IS911 transposase K07497 K07497; putative transposase
D PMPD1_0652 Integrase core domain protein K07497 K07497; putative transposase
D PMPD1_0749 IS3 family transposase K07497 K07497; putative transposase
D PMPD1_0750 Transposase K07497 K07497; putative transposase
D PMPD1_1050 Transposase K07497 K07497; putative transposase
D PMPD1_1051 Integrase core domain protein K07497 K07497; putative transposase
D PMPD1_1055 Transposase K07497 K07497; putative transposase
D PMPD1_1299 Integrase core domain protein K07497 K07497; putative transposase
D PMPD1_3367 Integrase core domain protein K07497 K07497; putative transposase
D PMPD1_4004 Transposase K07497 K07497; putative transposase
D PMPD1_4360 Integrase core domain-containing protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PMPD1_2309 Phage shock protein A K03969 pspA; phage shock protein A
D PMPD1_2306 Phage shock protein D K03971 pspD; phage shock protein D
D PMPD1_1251 Nucleoid-associated protein YbaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PMPD1_3487 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PMPD1_1906 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PMPD1_2125 Dipeptide and tripeptide permease A K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PMPD1_1171 Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PMPD1_4038 ketopantoate/pantoate/pantothenate transporter PanS K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PMPD1_0988 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PMPD1_1925 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PMPD1_2766 permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PMPD1_3734 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PMPD1_0207 aspartate-alanine antiporter K07085 K07085; putative transport protein
D PMPD1_1608 transporter K07085 K07085; putative transport protein
D PMPD1_1099 hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein
C 99978 Cell growth
D PMPD1_2356 septation protein A K06190 ispZ; intracellular septation protein
D PMPD1_0245 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB
D PMPD1_3894 Iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D PMPD1_2399 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D PMPD1_4139 murein hydrolase activator K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PMPD1_1836 Penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
D PMPD1_1695 Competence protein TfoX K07343 tfoX; DNA transformation protein and related proteins
D PMPD1_0213 Pilus assembly protein PapD K15540 ecpD; chaperone protein EcpD
D PMPD1_3551 SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D PMPD1_0886 AmpE protein K03807 ampE; AmpE protein
D PMPD1_2435 RNA chaperone ProQ K03607 proQ; ProP effector
D PMPD1_0201 Universal stress protein A K06149 uspA; universal stress protein A
D PMPD1_2582 Universal stress protein UspC K14064 uspC; universal stress protein C
D PMPD1_2274 Universal stress protein UspE K14055 uspE; universal stress protein E
D PMPD1_4195 GTP-binding protein K06207 typA; GTP-binding protein
D PMPD1_0720 Type VI secretion system-associated FHA domain protein TagH K07169 K07169; FHA domain-containing protein
D PMPD1_2020 type VI secretion system-associated FHA domain protein TagH K07169 K07169; FHA domain-containing protein
D PMPD1_1416 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PMPD1_2602 Phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PMPD1_2392 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D PMPD1_3811 SH3 domain-containing protein K07184 ygiM; SH3 domain protein
D PMPD1_0765 YtjB family periplasmic protein K07186 smp; membrane protein
D PMPD1_4295 hypothetical protein K13461 hopM1; effector protein HopM1
D PMPD1_1196 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
D PMPD1_1061 Diguanylate phosphodiesterase K21973 bluF; blue light- and temperature-responsive anti-repressor
D PMPD1_1060 Two-component-system connector protein YcgZ K21974 ycgZ; probable RcsB/C two-component-system connector
D PMPD1_3706 two-component-system connector protein YcgZ K21974 ycgZ; probable RcsB/C two-component-system connector
D PMPD1_1059 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector
D PMPD1_3705 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector
D PMPD1_1058 hypothetical protein K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance
C 99992 Structural proteins
D PMPD1_1645 Outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D PMPD1_2007 lipoprotein localization protein LolB K02494 lolB; outer membrane lipoprotein LolB
D PMPD1_3063 Phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PMPD1_4268 ECA polysaccharide chain length modulation protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D PMPD1_2116 outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB
D PMPD1_0954 Outer membrane protein K06142 hlpA; outer membrane protein
D PMPD1_3498 Peptidase K06194 nlpD; lipoprotein NlpD
D PMPD1_0522 Lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D PMPD1_2353 Outer membrane protein OmpW K07275 ompW; outer membrane protein
D PMPD1_2054 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D PMPD1_2411 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D PMPD1_1204 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D PMPD1_2856 Membrane assembly protein AsmA K07289 asmA; AsmA protein
D PMPD1_0156 AsmA family protein K07290 yhjG; AsmA family protein
D PMPD1_1272 NfeD family protein K07340 ybbJ; inner membrane protein
D PMPD1_1108 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D PMPD1_2328 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D PMPD1_2043 osmotically-inducible lipoprotein OsmE K04064 osmE; osmotically inducible lipoprotein OsmE
D PMPD1_3068 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PMPD1_3065 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PMPD1_3298 cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ
D PMPD1_0457 AaeX family protein K21695 aaeX; protein AaeX
C 99994 Others
D PMPD1_4336 Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D PMPD1_0380 Bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D PMPD1_1783 Glucans biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D PMPD1_2562 Copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D PMPD1_2728 phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D PMPD1_0820 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D PMPD1_4252 Iron-sulfur cluster assembly protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PMPD1_3735 SidA/IucD/PvdA family monooxygenase K07222 K07222; putative flavoprotein involved in K+ transport
D PMPD1_2072 Hemin transporter K07225 hmuS; putative hemin transport protein
D PMPD1_3696 heme utilization cystosolic carrier protein HutX K07227 chuX; heme iron utilization protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PMPD1_3025 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D PMPD1_1728 putative chitinase K03791 K03791; putative chitinase
D PMPD1_2223 Glycoside hydrolase family protein K03791 K03791; putative chitinase
D PMPD1_1801 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor
D PMPD1_2986 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D PMPD1_3412 YfiM family lipoprotein K05811 yfiM; putative lipoprotein
D PMPD1_2015 Putative cation transport regulator ChaB K06197 chaB; cation transport regulator
D PMPD1_0756 Osmotically-inducible protein Y K04065 osmY; hyperosmotically inducible periplasmic protein
D PMPD1_1908 phosphatase K04477 ycdX; putative hydrolase
D PMPD1_0223 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D PMPD1_0225 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D PMPD1_3346 Autonomous glycyl radical cofactor K06866 grcA; autonomous glycyl radical cofactor
D PMPD1_2377 patatin-like phospholipase RssA K07001 K07001; NTE family protein
D PMPD1_0936 Iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D PMPD1_2082 Fe-S cluster assembly protein SufA K05997 sufA; Fe-S cluster assembly protein SufA
D PMPD1_2083 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PMPD1_2085 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PMPD1_2047 metal-dependent hydrolase K07038 K07038; inner membrane protein
D PMPD1_0622 phosphotriesterase-related protein K07048 PTER; phosphotriesterase-related protein
D PMPD1_0158 Inner membrane protein YhjD K07058 K07058; membrane protein
D PMPD1_4193 hypothetical protein K07058 K07058; membrane protein
D PMPD1_3942 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D PMPD1_2087 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D PMPD1_3560 cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D PMPD1_4245 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D PMPD1_1790 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D PMPD1_1856 high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D PMPD1_1786 SecY/secA suppressor protein K12147 msyB; acidic protein MsyB
D PMPD1_0694 ferric iron reductase protein K13255 fhuF; ferric iron reductase protein FhuF
D PMPD1_0370 Protein SlyX K03745 slyX; SlyX protein
D PMPD1_0419 DUF494 domain-containing protein K03747 smg; Smg protein
D PMPD1_0790 protein CreA K05805 creA; CreA protein
D PMPD1_3651 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein
D PMPD1_3026 cell division protein DedD K03749 dedD; DedD protein
D PMPD1_0327 SPOR domain-containing protein K03112 damX; DamX protein
D PMPD1_2896 outer membrane permeability protein SanA K03748 sanA; SanA protein
D PMPD1_3029 DedA family protein K03975 dedA; membrane-associated protein
D PMPD1_2984 stress response protein ElaB K05594 elaB; ElaB protein
D PMPD1_2304 putative membrane protein K08990 ycjF; putative membrane protein
D PMPD1_0251 DUF1145 family protein K08993 yhhL; putative membrane protein
D PMPD1_2378 hypothetical protein K09858 K09858; SEC-C motif domain protein
D PMPD1_1224 hypothetical protein K09914 K09914; putative lipoprotein
D PMPD1_4024 maltose operon protein MalM K05775 malM; maltose operon periplasmic protein
D PMPD1_3442 Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D PMPD1_1712 hypothetical protein K06884 K06884; uncharacterized protein
D PMPD1_3475 general stress protein K06884 K06884; uncharacterized protein
D PMPD1_3902 esterase K06889 K06889; uncharacterized protein
D PMPD1_1508 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D PMPD1_2305 YcjX family protein K06918 K06918; uncharacterized protein
D PMPD1_1701 CoA-binding domain protein K06929 K06929; uncharacterized protein
D PMPD1_2108 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D PMPD1_2354 Zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D PMPD1_2920 hypothetical protein K06940 K06940; uncharacterized protein
D PMPD1_1036 GTPase family protein K06946 K06946; uncharacterized protein
D PMPD1_2662 Hydrolase K06950 K06950; uncharacterized protein
D PMPD1_1307 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D PMPD1_2046 L-cystine transporter K06956 K06956; uncharacterized protein
D PMPD1_0616 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein
D PMPD1_1077 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein
D PMPD1_3471 hypothetical protein K06987 K06987; uncharacterized protein
D PMPD1_1839 hypothetical protein K07000 K07000; uncharacterized protein
D PMPD1_3793 Esterase YqiA K07000 K07000; uncharacterized protein
D PMPD1_2939 hypothetical protein K07014 K07014; uncharacterized protein
D PMPD1_0355 hypothetical protein K07019 K07019; uncharacterized protein
D PMPD1_3250 Neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D PMPD1_0367 hypothetical protein K07070 K07070; uncharacterized protein
D PMPD1_3018 Epimerase K07071 K07071; uncharacterized protein
D PMPD1_0534 Putative permease K07089 K07089; uncharacterized protein
D PMPD1_3053 TSUP family transporter K07090 K07090; uncharacterized protein
D PMPD1_4371 hypothetical protein K07090 K07090; uncharacterized protein
D PMPD1_3890 YtfJ family protein K07109 K07109; uncharacterized protein
D PMPD1_2206 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D PMPD1_3858 hypothetical protein K07121 K07121; uncharacterized protein
D PMPD1_2555 membrane protein K07136 K07136; uncharacterized protein
D PMPD1_1683 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D PMPD1_2903 DUF418 family protein K07148 K07148; uncharacterized protein
D PMPD1_4352 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D PMPD1_1397 DUF493 family protein K09158 K09158; uncharacterized protein
D PMPD1_2402 hypothetical protein K09160 K09160; uncharacterized protein
D PMPD1_3005 hypothetical protein K09161 K09161; uncharacterized protein
D PMPD1_1308 Plasmid partition ParA protein K09701 K09701; uncharacterized protein
D PMPD1_2675 DUF1349 domain-containing protein K09702 K09702; uncharacterized protein
D PMPD1_1298 DUF333 domain-containing protein K09712 K09712; uncharacterized protein
D PMPD1_1157 hypothetical protein K09768 K09768; uncharacterized protein
D PMPD1_2359 YciI family protein K09780 K09780; uncharacterized protein
D PMPD1_2655 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D PMPD1_2393 hypothetical protein K09786 K09786; uncharacterized protein
D PMPD1_1662 hypothetical protein K09791 K09791; uncharacterized protein
D PMPD1_4140 Divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D PMPD1_3352 RnfH family protein K09801 K09801; uncharacterized protein
D PMPD1_2799 DUF496 family protein K09802 K09802; uncharacterized protein
D PMPD1_3633 Oxidative stress defense protein K09807 K09807; uncharacterized protein
D PMPD1_0112 hypothetical protein K09824 virK; uncharacterized protein
D PMPD1_2777 DUF535 domain-containing protein K09824 virK; uncharacterized protein
D PMPD1_0798 hypothetical protein K09861 K09861; uncharacterized protein
D PMPD1_0877 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D PMPD1_4057 DUF416 family protein K09891 K09891; uncharacterized protein
D PMPD1_4201 Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein
D PMPD1_3627 hypothetical protein K09895 K09895; uncharacterized protein
D PMPD1_4206 YihD family protein K09896 K09896; uncharacterized protein
D PMPD1_4285 hypothetical protein K09897 K09897; uncharacterized protein
D PMPD1_0354 hypothetical protein K09898 K09898; uncharacterized protein
D PMPD1_3006 DUF412 domain-containing protein K09899 K09899; uncharacterized protein
D PMPD1_2362 hypothetical protein K09901 K09901; uncharacterized protein
D PMPD1_2405 hypothetical protein K09902 K09902; uncharacterized protein
D PMPD1_2938 DUF1414 domain-containing protein K09904 K09904; uncharacterized protein
D PMPD1_2564 VOC family protein K09907 K09907; uncharacterized protein
D PMPD1_0468 DUF1043 family protein K09908 K09908; uncharacterized protein
D PMPD1_1700 DUF2057 family protein K09909 K09909; uncharacterized protein
D PMPD1_0907 hypothetical protein K09910 K09910; uncharacterized protein
D PMPD1_1692 Macrodomain Ter protein K09911 K09911; uncharacterized protein
D PMPD1_1991 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D PMPD1_2387 DUF1315 domain-containing protein K09916 K09916; uncharacterized protein
D PMPD1_2415 YoaH family protein K09917 K09917; uncharacterized protein
D PMPD1_2532 hypothetical protein K09918 K09918; uncharacterized protein
D PMPD1_0184 N-acetyltransferase K09919 K09919; uncharacterized protein
D PMPD1_3795 DUF1249 family protein K09920 K09920; uncharacterized protein
D PMPD1_4249 DUF484 family protein K09921 K09921; uncharacterized protein
D PMPD1_3665 DUF469 domain-containing protein K09923 K09923; uncharacterized protein
D PMPD1_1661 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein
D PMPD1_3910 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D PMPD1_1158 DUF2076 domain-containing protein K09945 K09945; uncharacterized protein
D PMPD1_2258 hypothetical protein K09946 K09946; uncharacterized protein
D PMPD1_3188 hypothetical protein K09954 K09954; uncharacterized protein
D PMPD1_2958 50S ribosomal protein L21 K09958 K09958; uncharacterized protein
D PMPD1_1266 hypothetical protein K09973 K09973; uncharacterized protein
D PMPD1_1549 HutD-family protein K09975 K09975; uncharacterized protein
D PMPD1_2287 Amine metabolic protein ydbL K09978 K09978; uncharacterized protein
D PMPD1_0532 hypothetical protein K09979 K09979; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 6, 2025