+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Pecten maximus (king scallop)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 117337790 mRNA cap guanine-N7 methyltransferase-like K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 117316469 mRNA-capping enzyme-like isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 117334256 cyclin-dependent kinase 7-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 117324235 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 117321994 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 117315426 RNA guanine-N7 methyltransferase activating subunit-like K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 117334073 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 117342350 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
E 117320848 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 117337436 cleavage and polyadenylation specificity factor subunit 5-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 117336463 cleavage and polyadenylation specificity factor subunit 6-like isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 117343689 polyribonucleotide 5'-hydroxyl-kinase Clp1-like K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 117329764 pre-mRNA cleavage complex 2 protein Pcf11-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 117337528 cleavage and polyadenylation specificity factor subunit 1-like isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 117324054 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 117335579 cleavage and polyadenylation specificity factor subunit 3-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 117336662 cleavage and polyadenylation specificity factor subunit 4-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 117329182 pre-mRNA 3'-end-processing factor FIP1-like isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 117345403 pre-mRNA 3' end processing protein WDR33-like K15542 PFS2; polyadenylation factor subunit 2
E 117331844 WD repeat-containing protein 82-like K14962 WDR82; COMPASS component SWD2
E 117323385 serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 117324794 serine/threonine-protein phosphatase PP1-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 117333655 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 117345108 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 117344433 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like K14406 CSTF1; cleavage stimulation factor subunit 1
E 117328154 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 117326964 cleavage stimulation factor subunit 3-like K14408 CSTF3; cleavage stimulation factor subunit 3
E 117322876 LOW QUALITY PROTEIN: symplekin-like K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 117338066 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 117332989 small nuclear ribonucleoprotein Sm D3-like isoform X1 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 117328021 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 117331643 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 117339093 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 117327979 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 117336207 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 117324054 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 117335579 cleavage and polyadenylation specificity factor subunit 3-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 117328154 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 117322876 LOW QUALITY PROTEIN: symplekin-like K06100 SYMPK; symplekin
E 117338747 histone RNA hairpin-binding protein-like K18710 SLBP; histone RNA hairpin-binding protein
D DRB sensitivity inducing factor (DSIF) complex
E 117333410 transcription elongation factor SPT4-like K15171 SUPT4H1; transcription elongation factor SPT4
E 117335643 transcription elongation factor SPT5-like K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 117337680 N6-adenosine-methyltransferase subunit METTL3-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 117331254 N6-adenosine-methyltransferase non-catalytic subunit-like K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 117325167 N(6)-adenine-specific DNA methyltransferase METTL4-like isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 117333072 RNA N6-adenosine-methyltransferase mettl16-like K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 117327310 LOW QUALITY PROTEIN: pre-mRNA-splicing regulator WTAP-like K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 117338428 LOW QUALITY PROTEIN: protein virilizer homolog K22910 VIRMA; protein virilizer
E 117331349 RNA-binding protein spenito-like K13190 RBM15; RNA-binding protein 15
E 117341973 zinc finger CCCH domain-containing protein 13-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 117331443 E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 117323163 poly(A) polymerase beta-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 117335228 uncharacterized protein LOC117335228 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 117322484 speckle targeted PIP5K1A-regulated poly(A) polymerase-like K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 117344123 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 117336604 RNA demethylase ALKBH5-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 117344623 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43
E 117337369 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43
E 117338406 TAR DNA-binding protein 43-like isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 117330346 DNA/RNA-binding protein KIN17-like K13102 KIN; DNA/RNA-binding protein KIN17
D 117338550 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 117327988 terminal nucleotidyltransferase 5C-like isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 117324434 zinc finger CCCH domain-containing protein 14-like K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 117317046 serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 117334531 RNA-binding protein 8A-like K12876 RBM8A; RNA-binding protein 8A
E 117325194 protein mago nashi homolog 2 isoform X1 K12877 MAGOH; protein mago nashi
E 117330974 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 117321612 spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 117320675 spliceosome RNA helicase DDX39B-like K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 117339144 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 117327663 coiled-coil domain-containing protein 174-like K25178 CCDC174; coiled-coil domain-containing protein 174
E 117317255 protein CASC3-like K14323 CASC3; protein CASC3
E 117326906 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 117323661 pinin-like K13114 PNN; pinin
E 117337055 apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 117335602 RNA-binding protein with serine-rich domain 1-B-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 117327280 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 117326224 LOW QUALITY PROTEIN: THO complex subunit 1-like K12878 THOC1; THO complex subunit 1
E 117328998 THO complex subunit 2-like isoform X1 K12879 THOC2; THO complex subunit 2
E 117339145 THO complex subunit 3-like K12880 THOC3; THO complex subunit 3
E 117330974 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 117332544 THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 117332615 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 117330681 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 117342293 PCI domain-containing protein 2-like K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 117321656 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 117337609 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 117329277 caltractin K10840 CETN2; centrin-2
E 117315156 centrin-3-like K16466 CETN3; centrin-3
E 117315563 centrin-3 K16466 CETN3; centrin-3
E 117330675 LOW QUALITY PROTEIN: germinal-center associated nuclear protein-like K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 117325307 nucleoprotein TPR-like K09291 TPR; nucleoprotein TPR
E 117325356 mRNA export factor-like K14298 RAE1; mRNA export factor
E 117330760 LOW QUALITY PROTEIN: protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 117326903 nucleoporin Nup37-like K14302 NUP37; nuclear pore complex protein Nup37
E 117331842 nuclear pore complex protein Nup85-like K14304 NUP85; nuclear pore complex protein Nup85
E 117327738 nucleoporin Nup43-like isoform X1 K14305 NUP43; nuclear pore complex protein Nup43
E 117336012 nuclear pore complex protein Nup50-like isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 117329887 nuclear pore complex protein Nup54-like isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 117335624 nuclear pore glycoprotein p62-like isoform X1 K14306 NUP62; nuclear pore complex protein Nup62
E 117332647 nucleoporin 88-like K14318 NUP88; nuclear pore complex protein Nup88
E 117337181 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93
E 117329979 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 117339883 nuclear pore complex protein Nup107-like K14301 NUP107; nuclear pore complex protein Nup107
E 117324138 nuclear pore complex protein Nup133-like K14300 NUP133; nuclear pore complex protein Nup133
E 117345227 nucleoporin NUP188 homolog isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 117326008 nuclear pore complex protein Nup153-like isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 117325752 nuclear pore complex protein Nup155-like K14312 NUP155; nuclear pore complex protein Nup155
E 117335937 nuclear pore complex protein Nup160-like K14303 NUP160; nuclear pore complex protein Nup160
E 117335826 nucleoporin NUP35-like isoform X1 K14313 NUP35; nuclear pore complex protein Nup53
E 117328287 LOW QUALITY PROTEIN: nuclear pore complex protein Nup205-like K14310 NUP205; nuclear pore complex protein Nup205
E 117336903 nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 117317149 nuclear pore complex protein Nup214-like K14317 NUP214; nuclear pore complex protein Nup214
E 117344958 mucin-5AC-like isoform X1 K14316 POM121; nuclear pore complex protein Nup121
E 117329486 nucleoporin p58/p45-like isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 117316754 nucleoporin NUP42-like K14321 NUPL2; nucleoporin-like protein 2
E 117325116 nucleoporin NDC1-like K14315 NDC1; nucleoporin NDC1
E 117337103 nucleoporin SEH1-like K14299 SEH1; nucleoporin SEH1
E 117329768 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 117344349 LOW QUALITY PROTEIN: aladin-like K14320 AAAS; aladin
E 117315156 centrin-3-like K16466 CETN3; centrin-3
E 117315563 centrin-3 K16466 CETN3; centrin-3
E 117333617 nucleoporin GLE1-like isoform X1 K18723 GLE1; nucleoporin GLE1
E 117322921 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
D Ran-mediated transport factors
E 117332630 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 117333007 GTP-binding nuclear protein ran-1-like K07936 RAN; GTP-binding nuclear protein Ran
E 117315031 acidic leucine-rich nuclear phosphoprotein 32 family member B-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 117342183 uncharacterized protein LOC117342183 isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 117332425 ELAV-like protein 2 K13088 ELAVL1; ELAV-like protein 1
E 117321888 ELAV-like protein 1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 117325994 ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 117316706 FAS-associated factor 2-like K18726 FAF2; FAS-associated factor 2
E 117325605 transitional endoplasmic reticulum ATPase isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
E 117339428 protein-lysine methyltransferase METTL21D-like isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 117323986 exportin-1-like K14290 XPO1; exportin-1
E 117339959 exportin-7-like K18460 XPO7; exportin-7
E 117329724 LOW QUALITY PROTEIN: ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 117342143 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 117338079 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 117342347 ATP-dependent RNA helicase eIF4A-like isoform X1 K03257 EIF4A; translation initiation factor 4A
E 117345080 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 117336874 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 117322224 eukaryotic translation initiation factor 4B-like isoform X1 K03258 EIF4B; translation initiation factor 4B
E 117332506 eukaryotic translation initiation factor 4H-like K24086 EIF4H; translation initiation factor 4H
E 117329136 eukaryotic translation initiation factor 4E-binding protein 2-like K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 117332802 proline-rich protein 36-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 117324459 protein angel homolog 2-like isoform X1 K18729 ANGEL; protein angel
E 117342365 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 117328955 cytoplasmic FMR1-interacting protein 2-like K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 117329963 gem-associated protein 5-like K13133 GEMIN5; gem associated protein 5
E 117328824 uncharacterized protein LOC117328824 isoform X1 K13133 GEMIN5; gem associated protein 5
E 117339395 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 117315315 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 117341923 putative ATP-dependent RNA helicase Pl10 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 117344482 GRB10-interacting GYF protein 2-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 117316859 polyadenylate-binding protein 4-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 117325771 polyadenylate-binding protein-interacting protein 1-like isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 117339205 polyadenylate-binding protein-interacting protein 2B-like K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 117322048 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 117326878 deformed epidermal autoregulatory factor 1 homolog isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 117320558 deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 117329399 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence
E 117332747 density-regulated protein homolog K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 117335448 APOBEC1 complementation factor-like isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 117321347 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 117343410 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 117343438 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 117331435 heterogeneous nuclear ribonucleoprotein 87F-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117331918 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117315739 heterogeneous nuclear ribonucleoprotein 87F-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117325918 glycine-rich RNA-binding protein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117333190 RNA-binding protein Musashi homolog 2-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 117334265 DAZ-associated protein 1-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 117326278 HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 117332850 protein pelota homolog K06965 PELO; protein pelota
E 117337788 polyadenylate-binding protein 2-B-like K14396 PABPN1; polyadenylate-binding protein 2
E 117344841 ATP-dependent RNA helicase DDX19A-like isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 117321718 LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like K12867 SYF1; pre-mRNA-splicing factor SYF1
E 117343436 SAP domain-containing ribonucleoprotein-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 117325821 regulator of chromosome condensation-like K11493 RCC1; regulator of chromosome condensation
E 117334752 la-related protein 6-like K18733 LARP6; la-related protein 6
E 117336181 transcriptional activator protein Pur-beta-like isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha
E 117331884 uncharacterized protein LOC117331884 K22414 POLDIP3; polymerase delta-interacting protein 3
E 117335435 zinc finger CCCH domain-containing protein 11A-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 117324337 leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 117339104 eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 117331925 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 117335004 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 117331669 regulator of nonsense transcripts 2-like K14327 UPF2; regulator of nonsense transcripts 2
E 117342748 regulator of nonsense transcripts 3A-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 117338604 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 117340190 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 117339830 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 117342673 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 117324432 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 117323239 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 117323702 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 117338294 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 117334313 LOW QUALITY PROTEIN: protein SMG5-like K11125 SMG5; protein SMG5
E 117332883 LOW QUALITY PROTEIN: telomerase-binding protein EST1A-like K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 117341990 uncharacterized protein LOC117341990 K14409 SMG7; protein SMG7
E 117345349 protein smg8-like K18734 SMG8; protein SMG8
E 117332424 protein SMG9-like K18735 SMG9; protein SMG9
E 117344482 GRB10-interacting GYF protein 2-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 117315618 LOW QUALITY PROTEIN: selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 117330096 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 117324238 GTP-binding protein 1-like K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 117325684 pumilio homolog 3-like K14844 PUF6; pumilio homology domain family member 6
E 117315603 uncharacterized protein LOC117315603 isoform X1 K10357 MYO5; myosin V
E 117315604 LOW QUALITY PROTEIN: unconventional myosin-Va-like K10357 MYO5; myosin V
E 117330797 protein bicaudal D-like isoform X1 K18739 BICD; protein bicaudal D
E 117341021 uncharacterized protein LOC117341021 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117341406 uncharacterized protein LOC117341406 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117342435 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117342436 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117342473 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117342894 uncharacterized protein LOC117342894 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117325173 egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 117329100 piRNA biogenesis protein EXD1-like isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 117330285 actin, plasmodial isoform-like K05692 ACTB_G1; actin beta/gamma 1
E 117341010 actin, cytoplasmic-like K05692 ACTB_G1; actin beta/gamma 1
E 117325158 actin-3-like K05692 ACTB_G1; actin beta/gamma 1
E 117325159 actin-2 isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 117325161 actin-3-like K05692 ACTB_G1; actin beta/gamma 1
E 117317706 actin, adductor muscle K05692 ACTB_G1; actin beta/gamma 1
E 117338259 actin-3-like K05692 ACTB_G1; actin beta/gamma 1
E 117338323 actin, cytoplasmic 2-like isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 117338435 actin-85C-like K05692 ACTB_G1; actin beta/gamma 1
E 117328984 T-box protein VegT-like K10180 TBX6; T-box protein 6
E 117339873 uncharacterized protein LOC117339873 K18741 NANOS1; protein nanos 1
E 117344445 hairy/enhancer-of-split related with YRPW motif protein 2-like K09090 HESN; hairy and enhancer of split, invertebrate
D Trans-acting binding proteins
E 117315244 LOW QUALITY PROTEIN: far upstream element-binding protein 1-like K13210 FUBP; far upstream element-binding protein
E 117342481 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 117343229 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 117343606 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 117316446 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 117323666 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 117334370 HCLS1-associated protein X-1-like isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 117342648 arf-GAP domain and FG repeat-containing protein 1-like isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 117339395 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 117315315 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 117342365 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 117328955 cytoplasmic FMR1-interacting protein 2-like K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 117321771 poly(rC)-binding protein 3-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 117336882 caprin-1-like isoform X1 K18743 CAPRIN1; caprin-1
E 117345428 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 117344527 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 117316571 protein argonaute-2-like isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 117342143 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 117338079 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 117335004 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 117341923 putative ATP-dependent RNA helicase Pl10 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 117340975 ATP-dependent RNA helicase cgh-1-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 117334245 RNA-binding protein MEX3B-like isoform X1 K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 117338371 protein LSM14 homolog B-like isoform X1 K18749 LSM14; protein LSM14
E 117345428 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1
E 117337036 LOW QUALITY PROTEIN: Wilms tumor protein 1-interacting protein homolog K16682 AJUBA; LIM domain-containing protein
E 117330385 putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 117339014 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 117326205 transportin-1-like isoform X1 K18752 TNPO1; transportin-1
E 117338294 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 117334313 LOW QUALITY PROTEIN: protein SMG5-like K11125 SMG5; protein SMG5
E 117332883 LOW QUALITY PROTEIN: telomerase-binding protein EST1A-like K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 117341990 uncharacterized protein LOC117341990 K14409 SMG7; protein SMG7
E 117324331 mRNA decay activator protein ZFP36L2-A-like K18753 ZFP36L; butyrate response factor
E 117327687 protein lin-28 homolog isoform X1 K18754 LIN28; protein lin-28
E 117327253 uncharacterized protein LOC117327253 isoform X1 K18754 LIN28; protein lin-28
E 117338816 huntingtin-like K04533 HD; huntingtin
E 117323947 protein bicaudal C homolog 1-B-like K18756 BICC1; protein bicaudal C
E 117331435 heterogeneous nuclear ribonucleoprotein 87F-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117331918 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117315739 heterogeneous nuclear ribonucleoprotein 87F-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117325918 glycine-rich RNA-binding protein 1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 117325503 cAMP-dependent protein kinase catalytic subunit 1 isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 117328691 la-related protein 1B-like K18757 LARP1; la-related protein 1
E 117333248 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 117334372 m7GpppN-mRNA hydrolase-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 117330520 mRNA-decapping enzyme 1B-like K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 117338765 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 117320916 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 117330728 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 117326110 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 117317728 U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 117334695 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 117315793 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 117320413 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 117330620 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 117323800 kinesin light chain-like isoform X1 K10407 KLC; kinesin light chain
E 117319852 uncharacterized protein LOC117319852 K10407 KLC; kinesin light chain
E 117315603 uncharacterized protein LOC117315603 isoform X1 K10357 MYO5; myosin V
E 117315604 LOW QUALITY PROTEIN: unconventional myosin-Va-like K10357 MYO5; myosin V
E 117321861 tubulin alpha chain, testis-specific K07374 TUBA; tubulin alpha
E 117339630 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha
E 117339638 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 117343368 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 117343594 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 117343596 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 117316865 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 117337766 tubulin alpha-1 chain K07374 TUBA; tubulin alpha
E 117338048 tubulin alpha chain-like isoform X1 K07374 TUBA; tubulin alpha
E 117339395 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 117315315 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 117329963 gem-associated protein 5-like K13133 GEMIN5; gem associated protein 5
E 117328824 uncharacterized protein LOC117328824 isoform X1 K13133 GEMIN5; gem associated protein 5
E 117332411 trinucleotide repeat-containing gene 6C protein-like isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 117338059 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 117326842 CCR4-NOT transcription complex subunit 2-like isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 117329497 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 117336784 CCR4-NOT transcription complex subunit 4-like isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 117328226 uncharacterized protein LOC117328226 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 117329854 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 117314678 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 117343450 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 117328795 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 117330901 protein BTG1-like K14443 TOB; protein Tob/BTG
E 117341331 BTG family protein-like K14443 TOB; protein Tob/BTG
E 117336581 protein Tob1-like K14443 TOB; protein Tob/BTG
E 117332802 proline-rich protein 36-like isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 117326710 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 117320196 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 117335155 enhancer of mRNA-decapping protein 3-like K12615 EDC3; enhancer of mRNA-decapping protein 3
E 117337236 enhancer of mRNA-decapping protein 4-like isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 117318751 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 117339689 uncharacterized protein LOC117339689 K18760 NANOS2; protein nanos 2
E 117331669 regulator of nonsense transcripts 2-like K14327 UPF2; regulator of nonsense transcripts 2
E 117342748 regulator of nonsense transcripts 3A-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 117332972 uncharacterized protein LOC117332972 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117343211 RING finger protein nhl-1-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117325801 uncharacterized protein LOC117325801 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117335753 uncharacterized protein LOC117335753 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117327729 uncharacterized protein LOC117327729 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117319367 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117338551 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 117324125 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 117316980 YTH domain-containing family protein 2-like K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 117339289 nucleolysin TIAR-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 117316859 polyadenylate-binding protein 4-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 117342365 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 117332425 ELAV-like protein 2 K13088 ELAVL1; ELAV-like protein 1
E 117327964 ras GTPase-activating protein-binding protein 2-like isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 117342813 eukaryotic translation initiation factor 2A-like isoform X1 K15026 EIF2A; translation initiation factor 2A
E 117326087 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 117342347 ATP-dependent RNA helicase eIF4A-like isoform X1 K03257 EIF4A; translation initiation factor 4A
E 117339144 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 117322224 eukaryotic translation initiation factor 4B-like isoform X1 K03258 EIF4B; translation initiation factor 4B
E 117345080 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 117336874 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 117327632 ribosomal protein S6 kinase 2 alpha-like isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 117338593 receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 117315227 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 117322921 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
E 117329138 tudor domain-containing protein 3-like K18404 TDRD3; tudor domain-containing protein 3
E 117317431 la-related protein 4B-like K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 117330520 mRNA-decapping enzyme 1B-like K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 117334372 m7GpppN-mRNA hydrolase-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 117340975 ATP-dependent RNA helicase cgh-1-like K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 117335155 enhancer of mRNA-decapping protein 3-like K12615 EDC3; enhancer of mRNA-decapping protein 3
E 117337236 enhancer of mRNA-decapping protein 4-like isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 117318751 enhancer of mRNA-decapping protein 4-like K12616 EDC4; enhancer of mRNA-decapping protein 4
E 117326710 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 117320196 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 117338765 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 117320916 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 117330728 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 117326110 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 117317728 U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 117334695 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 117315793 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 117320413 LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 117330620 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 117344527 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 117323981 5'-3' exoribonuclease 2-like K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 117332919 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
E 117321138 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 117331654 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 117319178 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 117330460 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 117339201 exosome complex component CSL4-like isoform X1 K07573 CSL4; exosome complex component CSL4
E 117321632 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 117325777 exosome complex component RRP40-like K03681 RRP40; exosome complex component RRP40
E 117337763 exosome complex component RRP41-like K11600 RRP41; exosome complex component RRP41
E 117326849 exosome complex component RRP46-like K12590 RRP46; exosome complex component RRP46
E 117316805 exosome complex component MTR3-like K12587 MTR3; exosome complex component MTR3
E 117338021 exosome complex component RRP42-like K12589 RRP42; exosome complex component RRP42
E 117329609 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43
E 117328972 exosome complex component RRP45-like K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 117337714 exosome complex exonuclease RRP44-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 117325920 DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 117345043 exosome component 10-like K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 117323363 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 117337861 M-phase phosphoprotein 6-like K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 117338293 terminal nucleotidyltransferase 4A-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 117324277 zinc finger CCHC domain-containing protein 7-like K12597 AIR1_2; protein AIR1/2
E 117325972 exosome RNA helicase MTR4-like K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 117322048 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 117334415 LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37-like K12600 SKI3; superkiller protein 3
E 117315471 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 117328226 uncharacterized protein LOC117328226 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 117338059 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 117326842 CCR4-NOT transcription complex subunit 2-like isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 117329497 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 117336784 CCR4-NOT transcription complex subunit 4-like isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 117329854 CCR4-NOT transcription complex subunit 7-like isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 117321507 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 117337593 CCR4-NOT transcription complex subunit 10-like isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 117343450 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 117328795 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 117333215 poly(A)-specific ribonuclease PNLDC1-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 117333587 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 117344464 ATP-dependent DNA/RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 117330901 protein BTG1-like K14443 TOB; protein Tob/BTG
E 117341331 BTG family protein-like K14443 TOB; protein Tob/BTG
E 117336581 protein Tob1-like K14443 TOB; protein Tob/BTG
E 117329411 nocturnin-like K18764 NOCT; nocturnin [EC:3.1.3.108]
E 117338813 3'-5' exoribonuclease 1-like K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 117325248 ERI1 exoribonuclease 2-like K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 117331654 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 117319178 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 117317567 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 117330460 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 117325566 helicase with zinc finger domain 2-like isoform X1 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 117325675 LOW QUALITY PROTEIN: helicase with zinc finger domain 2-like K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 117344732 LOW QUALITY PROTEIN: helicase with zinc finger domain 2-like K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 117326476 helicase with zinc finger domain 2-like K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 117326567 LOW QUALITY PROTEIN: helicase with zinc finger domain 2-like K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 117324581 LOW QUALITY PROTEIN: nuclear exosome regulator NRDE2-like K26109 NRDE2; nuclear exosome regulator NRDE2
E 117323405 protein Smaug homolog 1-like isoform X1 K27396 SMG; protein Smaug
E 117335085 LOW QUALITY PROTEIN: focadhesin-like K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 117327828 uncharacterized protein LOC117327828 isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 117319725 LOW QUALITY PROTEIN: ribonuclease 3-like K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 117335040 oligoribonuclease, mitochondrial-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 117321386 ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117329907 ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117330829 ATP-dependent DNA helicase Q-like SIM K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117340357 ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117342077 ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117333108 ATP-dependent DNA helicase Q-like 3 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117333112 ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117342527 ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117314855 ATP-dependent DNA helicase Q-like SIM K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117315610 LOW QUALITY PROTEIN: ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117335325 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 3 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117336319 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117336681 ATP-dependent DNA helicase Q-like SIM K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117318147 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117318338 ATP-dependent DNA helicase Q-like 3 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117337702 probable ATP-dependent DNA helicase RecS K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117319309 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117319440 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117319684 ATP-dependent DNA helicase Q-like 3 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 117320506 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 117344628 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 117316133 ATP-dependent 6-phosphofructokinase-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 117339714 stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 117344380 heat shock protein 60A-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 117321632 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 117339201 exosome complex component CSL4-like isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 117337763 exosome complex component RRP41-like K11600 RRP41; exosome complex component RRP41
E 117338021 exosome complex component RRP42-like K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024