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Transcription Machinery - Petrimonas mucosa
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E ING2E5A_2347 rpoA; DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059} K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E ING2E5A_2441 rpoB; DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321} K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E ING2E5A_2442 rpoC; DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322} K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sigma factors
E ING2E5A_2636 sigA; RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963} K03086 rpoD; RNA polymerase primary sigma factor
E ING2E5A_2378 sigW1; ECF RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E ING2E5A_0292 RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAE15210,1} K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_0494 RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN13040,1} K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_0073 RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB57071,1} K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_0916 algU1; RNA polymerase sigma-H factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_0383 fecI; putative RNA polymerase sigma factor FecI K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_1358 sigZ; RNA polymerase sigma factor SigZ K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_0237 putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO43523,1} K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
E ING2E5A_1195 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E ING2E5A_2646 nusA; Transcription termination/antitermination protein NusA {ECO:0000255|HAMAP-Rule:MF_00945} K02600 nusA; transcription termination/antitermination protein NusA
E ING2E5A_0052 nusB; N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073} K03625 nusB; transcription antitermination protein NusB
E ING2E5A_2436 nusG; Transcription termination/antitermination protein NusG {ECO:0000255|HAMAP-Rule:MF_00948} K02601 nusG; transcription termination/antitermination protein NusG
E ING2E5A_2817 Transcriptional regulator UpxY-like protein {ECO:0000313|EMBL:CEA16016,1} K02601 nusG; transcription termination/antitermination protein NusG
E ING2E5A_0848 Anti-sigma B factor RsbT {ECO:0000313|EMBL:GAO30125,1} K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Transcription elongation factors
E ING2E5A_3025 DnaK suppressor protein {ECO:0000313|EMBL:CEA16723,1} K06204 dksA; RNA polymerase-binding transcription factor
E ING2E5A_2934 greA; Transcription elongation factor GreA {ECO:0000255|HAMAP-Rule:MF_00105} K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E ING2E5A_1301 rho; Transcription termination factor Rho {ECO:0000255|HAMAP-Rule:MF_01884} K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024