+D GENES KO
#
KEGG Orthology (KO) - Pasteurella multocida subsp. multocida HN06
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pmv00010]
D PMCN06_0436 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_0303 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMCN06_1747 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMCN06_1510 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_1630 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_1978 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_2219 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_0310 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMCN06_1511 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMCN06_1772 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMCN06_1501 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMCN06_0683 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMCN06_0973 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMCN06_0972 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMCN06_0754 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMCN06_0195 galM; galactose mutarotase, aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PMCN06_0630 enzyme related to aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PMCN06_0770 glucose-6-phosphate 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PMCN06_1804 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMCN06_0974 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMCN06_1599 ptsG; PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:pmv00020]
D PMCN06_1016 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D PMCN06_1096 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMCN06_1871 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMCN06_1015 sucA; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PMCN06_1014 sucB; 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1011 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMCN06_1012 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMCN06_1099 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMCN06_1100 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMCN06_1101 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMCN06_1102 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMCN06_0896 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMCN06_0580 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMCN06_1804 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMCN06_0973 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMCN06_0972 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pmv00030]
D PMCN06_0436 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMCN06_1811 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMCN06_1812 devB; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PMCN06_1816 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMCN06_1945 lsrE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMCN06_1885 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMCN06_2221 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMCN06_1906 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMCN06_2220 tal; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMCN06_1867 tal; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PMCN06_2188 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PMCN06_2214 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMCN06_2011 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PMCN06_1150 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PMCN06_1049 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMCN06_0285 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMCN06_1912 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PMCN06_0862 gntK; carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PMCN06_1510 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_1630 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_0303 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMCN06_1747 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pmv00040]
D PMCN06_0846 dcbC; UDP-glucose dehydrogenase DcbC K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMCN06_1954 ugp2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMCN06_1920 dlgD; 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D PMCN06_1911 lyx; L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D PMCN06_0830 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PMCN06_1910 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PMCN06_1909 sgbU; putative L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PMCN06_1908 sgbE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PMCN06_1945 lsrE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMCN06_1885 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PMCN06_1621 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PMCN06_1622 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PMCN06_1631 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
C 00051 Fructose and mannose metabolism [PATH:pmv00051]
D PMCN06_1522 scrK; aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMCN06_1632 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMCN06_0902 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMCN06_0153 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_0303 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMCN06_1747 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMCN06_0166 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D PMCN06_1355 srlD; srlD K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D PMCN06_1575 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PMCN06_1622 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PMCN06_1510 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_1630 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_1978 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_2219 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_2214 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PMCN06_0908 manX; PTS family mannose porter, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMCN06_0907 manY; PTS family mannose porter, IIC component K02795 manY; mannose PTS system EIIC component
D PMCN06_0906 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D PMCN06_0167 mtlA; PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMCN06_1354 srlB; glucitol/sorbitol-specific PTS system component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PMCN06_1353 srlE; PTS family glucitol/sorbitol porter component IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PMCN06_1352 srlA; PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:pmv00052]
D PMCN06_0195 galM; galactose mutarotase, aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PMCN06_0194 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMCN06_0193 galT; UDPglucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PMCN06_1007 galE; UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMCN06_1954 ugp2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_1523 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:pmv00053]
D PMCN06_0846 dcbC; UDP-glucose dehydrogenase DcbC K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMCN06_1912 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PMCN06_0829 ulaC; ascorbate-specific phosphotransferase enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMCN06_0828 ulaA; ascorbate-specific PTS system enzyme IIC/IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMCN06_0827 ulaG; putative L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D PMCN06_0830 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PMCN06_1910 sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PMCN06_1909 sgbU; putative L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PMCN06_1908 sgbE; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PMCN06_1920 dlgD; 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D PMCN06_1911 lyx; L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:pmv00500]
D PMCN06_1525 scrA; PTS system mannose/fructose family transporter subunit IIB K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PMCN06_1523 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PMCN06_1954 ugp2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMCN06_0573 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PMCN06_0574 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PMCN06_0571 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMCN06_0575 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PMCN06_0572 pulA; pullulanase K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D PMCN06_0570 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PMCN06_0974 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMCN06_0436 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMCN06_1522 scrK; aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMCN06_1632 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pmv00520]
D PMCN06_1236 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PMCN06_0974 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMCN06_0954 nagE; PTS family N-acetylglucosamine porter, IICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMCN06_0737 nagK; N-acetyl-D-glucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D PMCN06_0952 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PMCN06_0953 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PMCN06_1522 scrK; aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMCN06_1632 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PMCN06_2040 glmS; glucosamine--fructose-6-phosphate aminotransferase isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMCN06_0460 mrsA; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PMCN06_1565 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMCN06_1839 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PMCN06_1840 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PMCN06_1539 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PMCN06_1121 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMCN06_1854 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMCN06_2145 nanK; N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D PMCN06_2146 nanE; N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PMCN06_2142 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D PMCN06_1113 neuA; acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D PMCN06_0227 wbpO; UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D PMCN06_0223 wbjB; UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PMCN06_1599 ptsG; PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMCN06_1954 ugp2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMCN06_0846 dcbC; UDP-glucose dehydrogenase DcbC K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMCN06_0194 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMCN06_0193 galT; UDPglucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PMCN06_1007 galE; UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMCN06_0908 manX; PTS family mannose porter, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMCN06_0907 manY; PTS family mannose porter, IIC component K02795 manY; mannose PTS system EIIC component
D PMCN06_0906 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D PMCN06_0436 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMCN06_0902 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMCN06_0153 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PMCN06_0573 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pmv00620]
D PMCN06_0754 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMCN06_0973 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMCN06_0972 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1232 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMCN06_0763 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMCN06_0764 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMCN06_0683 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMCN06_1001 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMCN06_0136 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMCN06_0137 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMCN06_0666 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMCN06_0415 acyP; Acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PMCN06_1005 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D PMCN06_0243 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PMCN06_0747 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMCN06_1020 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PMCN06_1308 maeB; malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PMCN06_1680 oadA; oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D PMCN06_1681 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PMCN06_1679 oadG; oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D PMCN06_0580 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMCN06_0896 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PMCN06_1099 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMCN06_1100 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMCN06_1101 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMCN06_1102 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMCN06_0576 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMCN06_1804 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PMCN06_1360 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pmv00630]
D PMCN06_0754 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMCN06_0580 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMCN06_1016 gltA; citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D PMCN06_1096 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMCN06_1278 katE; catalase K03781 katE; catalase [EC:1.11.1.6]
D PMCN06_0589 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PMCN06_1886 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PMCN06_2288 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMCN06_1071 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_2030 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMCN06_0285 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PMCN06_0427 fdxG; formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMCN06_0428 fdxG; formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMCN06_0426 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PMCN06_0425 fdxI; formate dehydrogenase-N, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PMCN06_2218 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D PMCN06_1612 kynB; cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D PMCN06_0951 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pmv00640]
D PMCN06_0754 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMCN06_0763 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMCN06_0764 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1232 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMCN06_1001 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMCN06_0136 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMCN06_0137 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMCN06_0666 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMCN06_1012 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMCN06_1011 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMCN06_1096 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PMCN06_0413 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D PMCN06_1153 yqhD; alcohol dehydrogenase YqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:pmv00650]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMCN06_1681 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PMCN06_1099 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMCN06_1100 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMCN06_1101 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMCN06_1102 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMCN06_1803 gabD; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMCN06_1232 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PMCN06_0947 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_1894 ilvB; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_0946 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMCN06_1893 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pmv00660]
D PMCN06_0947 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_1894 ilvB; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_0946 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMCN06_1893 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMCN06_1012 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PMCN06_1011 sucD; succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PMCN06_1362 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMCN06_1363 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMCN06_1361 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pmv00562]
D PMCN06_0335 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMCN06_1978 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_2219 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pmv00190]
D PMCN06_1099 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMCN06_1100 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMCN06_1101 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMCN06_1102 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMCN06_0256 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMCN06_0257 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMCN06_1757 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMCN06_1759 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMCN06_1758 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMCN06_1756 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMCN06_1760 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMCN06_1753 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMCN06_1755 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMCN06_1754 atpE; ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMCN06_2272 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pmv00680]
D PMCN06_0427 fdxG; formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMCN06_0428 fdxG; formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PMCN06_0426 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D PMCN06_0425 fdxI; formate dehydrogenase-N, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D PMCN06_1071 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMCN06_0589 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PMCN06_1501 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMCN06_0576 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PMCN06_0580 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMCN06_1510 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_1630 fbaA; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PMCN06_0303 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMCN06_1747 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_1578 torA; Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMCN06_1579 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PMCN06_1577 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PMCN06_0563 torY; cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D PMCN06_0562 torZ; trimethylamine-N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMCN06_0763 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PMCN06_0764 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMCN06_0754 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMCN06_1772 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMCN06_2187 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMCN06_0911 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMCN06_2202 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pmv00910]
D PMCN06_1859 napA; nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D PMCN06_1862 napB; diheme cytochrome c NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D PMCN06_1287 nrfA; cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D PMCN06_1267 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PMCN06_2288 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMCN06_0605 cynT; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PMCN06_1466 cah; carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pmv00920]
D PMCN06_1810 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMCN06_1742 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PMCN06_0783 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D PMCN06_0785 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D PMCN06_0784 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D PMCN06_1695 glpE; thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D PMCN06_1689 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMCN06_2165 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMCN06_0943 met2; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PMCN06_0235 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMCN06_1595 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D PMCN06_1594 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pmv00061]
D PMCN06_1001 accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PMCN06_0136 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PMCN06_0137 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PMCN06_0666 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PMCN06_1454 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PMCN06_1456 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMCN06_1457 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMCN06_0358 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMCN06_1455 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMCN06_0505 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PMCN06_1328 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMCN06_1119 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMCN06_0308 fadD; long-chain acyl--CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_0766 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pmv00071]
D PMCN06_0308 fadD; long-chain acyl--CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_0766 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pmv00561]
D PMCN06_2030 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMCN06_2210 dhaK; Glycerone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PMCN06_2211 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PMCN06_1705 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMCN06_2281 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMCN06_1458 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMCN06_2162 plsY; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMCN06_1201 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMCN06_1508 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:pmv00564]
D PMCN06_1690 gspA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PMCN06_1701 glpA; sn-glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PMCN06_1700 glpB; Anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D PMCN06_1699 glpC; sn-glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D PMCN06_2281 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMCN06_2162 plsY; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMCN06_1201 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PMCN06_1508 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PMCN06_1685 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D PMCN06_1902 pldB; lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D PMCN06_1703 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PMCN06_1901 glpQ; cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PMCN06_1321 ynbB; protein YnbB K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PMCN06_1333 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PMCN06_1515 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PMCN06_1472 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PMCN06_0933 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PMCN06_1323 pgsA; CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PMCN06_0790 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D PMCN06_0738 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D PMCN06_1851 ymdC; protein YmdC K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:pmv00565]
D PMCN06_1685 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:pmv00600]
D PMCN06_0722 nanH; sialidase NanH K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PMCN06_0230 nanB; sialidase NanB K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
D PMCN06_1685 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D PMCN06_1685 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:pmv00592]
D PMCN06_1685 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pmv01040]
D PMCN06_0600 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PMCN06_0348 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pmv00230]
D PMCN06_0210 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMCN06_1806 nudE; ADP-ribose diphosphatase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D PMCN06_1049 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PMCN06_0760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMCN06_1072 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PMCN06_1290 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMCN06_0175 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PMCN06_0143 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PMCN06_1289 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PMCN06_0650 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PMCN06_0649 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PMCN06_0885 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PMCN06_1520 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMCN06_1074 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMCN06_0382 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMCN06_2270 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMCN06_1877 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMCN06_1807 yrfG; protein YrfG K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D PMCN06_1956 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMCN06_2128 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMCN06_1590 rihA; pyrimidine-specific ribonucleoside hydrolase RihA K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D PMCN06_1182 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PMCN06_0997 guaB; inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMCN06_0201 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMCN06_2192 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PMCN06_1619 gpt; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PMCN06_0999 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMCN06_0312 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PMCN06_0778 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMCN06_0781 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMCN06_0293 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PMCN06_0956 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D PMCN06_0811 yfbR; 5'-nucleotidase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D PMCN06_1384 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PMCN06_0314 spoT; guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMCN06_1564 gppA; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PMCN06_1507 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D PMCN06_1560 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D PMCN06_0295 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMCN06_0496 ygdH; LOG family protein YgdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PMCN06_1310 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PMCN06_1009 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMCN06_1950 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMCN06_0211 icc; cyclic 3',5'-adenosine monophosphate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PMCN06_2252 adaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
C 00240 Pyrimidine metabolism [PATH:pmv00240]
D PMCN06_1771 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMCN06_1768 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMCN06_0647 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PMCN06_1494 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PMCN06_0867 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PMCN06_1337 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PMCN06_0201 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMCN06_1950 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMCN06_1933 maf; spermidine synthase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PMCN06_1499 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PMCN06_0872 cmkA; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PMCN06_0280 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PMCN06_2270 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMCN06_1877 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMCN06_1490 yjjG; nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D PMCN06_1590 rihA; pyrimidine-specific ribonucleoside hydrolase RihA K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D PMCN06_1835 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PMCN06_1291 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMCN06_2255 pyrR; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMCN06_1310 cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PMCN06_0496 ygdH; LOG family protein YgdH K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D PMCN06_1034 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PMCN06_0595 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMCN06_0293 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PMCN06_0281 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PMCN06_0778 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMCN06_0781 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PMCN06_0811 yfbR; 5'-nucleotidase YfbR K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D PMCN06_1384 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D PMCN06_2185 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PMCN06_0008 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PMCN06_2227 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PMCN06_1227 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMCN06_1142 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D PMCN06_0609 NADP-dependent dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pmv00250]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_1837 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PMCN06_1256 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMCN06_0125 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PMCN06_0883 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMCN06_0037 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMCN06_0295 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PMCN06_1520 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PMCN06_1803 gabD; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMCN06_1267 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PMCN06_0619 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMCN06_2288 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMCN06_1771 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PMCN06_1768 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PMCN06_2040 glmS; glucosamine--fructose-6-phosphate aminotransferase isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMCN06_0760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pmv00260]
D PMCN06_0296 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMCN06_1190 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMCN06_1903 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMCN06_1189 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PMCN06_1188 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PMCN06_1071 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMCN06_0589 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PMCN06_2030 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PMCN06_1772 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMCN06_2187 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMCN06_0911 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMCN06_2202 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PMCN06_0609 NADP-dependent dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1515 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PMCN06_1275 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMCN06_1890 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMCN06_1892 racX; aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMCN06_0607 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMCN06_0608 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pmv00270]
D PMCN06_1689 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PMCN06_2165 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PMCN06_0864 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMCN06_1623 patB; aspartate transaminase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMCN06_0440 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMCN06_0202 metX; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMCN06_1106 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PMCN06_2128 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PMCN06_0031 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PMCN06_0174 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PMCN06_0296 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMCN06_1190 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMCN06_1903 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMCN06_0943 met2; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PMCN06_0235 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMCN06_0800 metY; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PMCN06_0596 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMCN06_0180 gshAB; bifunctional glutamate-cysteine ligase/glutathione synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_1892 racX; aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMCN06_0580 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PMCN06_1275 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PMCN06_2187 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMCN06_0911 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pmv00280]
D PMCN06_0596 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pmv00290]
D PMCN06_1890 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PMCN06_1362 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PMCN06_1363 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PMCN06_1361 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PMCN06_0947 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_1894 ilvB; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_0946 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMCN06_1893 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMCN06_1949 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMCN06_1891 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMCN06_0596 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMCN06_1256 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMCN06_1360 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pmv00300]
D PMCN06_0296 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMCN06_1190 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMCN06_1903 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMCN06_0177 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMCN06_0788 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PMCN06_0716 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PMCN06_0363 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMCN06_0208 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMCN06_2154 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMCN06_1682 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PMCN06_1165 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMCN06_1164 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pmv00310]
D PMCN06_1014 sucB; 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1892 racX; aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMCN06_1803 gabD; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:pmv00220]
D PMCN06_0877 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PMCN06_0883 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMCN06_0037 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMCN06_2288 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMCN06_1267 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_1256 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMCN06_0901 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PMCN06_0038 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PMCN06_0039 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PMCN06_0363 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMCN06_0040 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pmv00330]
D PMCN06_0595 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PMCN06_1639 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PMCN06_1638 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PMCN06_0875 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D PMCN06_0390 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D PMCN06_1640 ordL; oxidoreductase OrdL K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D PMCN06_1209 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PMCN06_0619 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMCN06_1475 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMCN06_0297 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pmv00340]
D PMCN06_2268 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PMCN06_2256 hisIE; HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PMCN06_2259 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PMCN06_2260 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PMCN06_2258 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PMCN06_2262 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PMCN06_0912 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2263 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2265 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:pmv00350]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_0912 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2263 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PMCN06_1790 hpaB; 4-hydroxyphenylacetate 3-monooxygenase oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D PMCN06_1789 hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D PMCN06_1798 hpcB; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D PMCN06_1797 hpcC; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D PMCN06_1799 hpcD; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D PMCN06_1795 hpaG1; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D PMCN06_1796 hpaG2; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D PMCN06_1801 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D PMCN06_1802 hpcH; 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D PMCN06_1803 gabD; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PMCN06_0880 tpl; tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:pmv00360]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_0912 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2263 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:pmv00380]
D PMCN06_2218 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D PMCN06_1612 kynB; cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D PMCN06_1014 sucB; 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1678 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D PMCN06_1278 katE; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pmv00400]
D PMCN06_0593 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMCN06_0725 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMCN06_2240 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PMCN06_0135 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PMCN06_1936 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PMCN06_2239 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PMCN06_0913 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PMCN06_0378 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PMCN06_0614 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMCN06_0613 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PMCN06_0611 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PMCN06_0610 trpC; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D PMCN06_0607 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PMCN06_0608 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PMCN06_0724 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PMCN06_1152 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_0912 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2263 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D PMCN06_1142 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:pmv00430]
D PMCN06_0764 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PMCN06_0763 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pmv00450]
D PMCN06_0235 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PMCN06_0864 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMCN06_1623 patB; aspartate transaminase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMCN06_0440 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PMCN06_0603 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PMCN06_0860 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMCN06_1589 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMCN06_0325 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pmv00460]
D PMCN06_1837 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PMCN06_1071 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pmv00470]
D PMCN06_0432 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PMCN06_1158 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMCN06_1892 racX; aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D PMCN06_0317 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMCN06_1162 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMCN06_2154 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PMCN06_1682 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pmv00480]
D PMCN06_0180 gshAB; bifunctional glutamate-cysteine ligase/glutathione synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PMCN06_1105 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMCN06_0200 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PMCN06_0648 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMCN06_1618 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PMCN06_1813 gst; glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMCN06_2228 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PMCN06_1871 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PMCN06_1816 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PMCN06_1811 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMCN06_2015 ahp1; glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D PMCN06_0875 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pmv00511]
D PMCN06_0722 nanH; sialidase NanH K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D PMCN06_0230 nanB; sialidase NanB K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis [PATH:pmv00540]
D PMCN06_1327 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMCN06_1154 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMCN06_1329 firA; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMCN06_1202 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PMCN06_1326 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMCN06_0937 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PMCN06_0551 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PMCN06_0588 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PMCN06_0550 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PMCN06_0935 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PMCN06_1972 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PMCN06_0963 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PMCN06_0381 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PMCN06_0187 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PMCN06_1970 kdtA; 3-deoxy-D-manno-octulosonic-acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D PMCN06_1181 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMCN06_0962 rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PMCN06_2045 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PMCN06_2010 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PMCN06_1528 waaC; ADP-heptose--LPS heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PMCN06_1527 waaF; ADP-heptose--LPS heptosyltransferase 2 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PMCN06_1509 rfaL; RfaL protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pmv00542]
D PMCN06_0483 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pmv00541]
D PMCN06_1954 ugp2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PMCN06_1007 galE; UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PMCN06_0846 dcbC; UDP-glucose dehydrogenase DcbC K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PMCN06_0199 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PMCN06_0902 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PMCN06_0153 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PMCN06_1565 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PMCN06_1113 neuA; acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D PMCN06_0223 wbjB; UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PMCN06_0222 wbjC; NAD-dependent epimerase/dehydratase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D PMCN06_0221 wecB; UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D PMCN06_0227 wbpO; UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:pmv00550]
D PMCN06_1121 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMCN06_1854 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMCN06_1159 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMCN06_1162 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMCN06_1165 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMCN06_1158 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMCN06_1164 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMCN06_1334 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMCN06_1163 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMCN06_1160 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMCN06_0344 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PMCN06_2233 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMCN06_0476 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMCN06_0674 ponC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PMCN06_1447 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMCN06_1166 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMCN06_1444 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMCN06_0776 dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pmv00552]
D PMCN06_0483 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pmv00543]
D PMCN06_0483 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PMCN06_1689 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pmv00730]
D PMCN06_1925 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PMCN06_0338 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMCN06_0565 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMCN06_0559 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMCN06_1927 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PMCN06_1924 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PMCN06_0791 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PMCN06_0977 rsgA; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMCN06_1009 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMCN06_1929 tenA; TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:pmv00740]
D PMCN06_0739 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMCN06_0813 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMCN06_2158 yigB; protein YigB K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D PMCN06_1642 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D PMCN06_0793 ribH; riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PMCN06_0680 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PMCN06_2197 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PMCN06_1789 hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D PMCN06_1927 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PMCN06_0210 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PMCN06_1869 nudJ; phosphatase NudJ K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D PMCN06_0758 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pmv00750]
D PMCN06_1003 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PMCN06_0911 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PMCN06_2209 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PMCN06_1188 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PMCN06_2231 pdxS; pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PMCN06_2230 pdxT; glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pmv00760]
D PMCN06_1956 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PMCN06_1644 nadR; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PMCN06_2270 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PMCN06_1877 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PMCN06_1950 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMCN06_2036 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PMCN06_0231 namPT; nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D PMCN06_0237 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PMCN06_0353 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PMCN06_0817 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PMCN06_0816 pntB; pyridine nucleotide transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PMCN06_1803 gabD; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pmv00770]
D PMCN06_0947 ilvB; acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_1894 ilvB; acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PMCN06_0946 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PMCN06_1893 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D PMCN06_1949 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PMCN06_1891 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PMCN06_1606 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PMCN06_0009 dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PMCN06_1950 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PMCN06_1971 kdtB; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PMCN06_1217 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PMCN06_1187 acpT; 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PMCN06_0596 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMCN06_1142 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:pmv00780]
D PMCN06_1468 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D PMCN06_0358 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMCN06_1455 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMCN06_1328 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMCN06_1119 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMCN06_1469 hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D PMCN06_1470 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMCN06_1471 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMCN06_1467 bioD2; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMCN06_0671 bioD1; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PMCN06_0398 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PMCN06_0996 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pmv00785]
D PMCN06_1442 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PMCN06_1441 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_0973 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PMCN06_0972 aceF; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PMCN06_1015 sucA; alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PMCN06_1014 sucB; 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:pmv00790]
D PMCN06_0755 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PMCN06_0249 nudB; dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D PMCN06_2161 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PMCN06_0942 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PMCN06_0459 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PMCN06_p03 sulII; dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D PMCN06_1478 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMCN06_0665 folC; dihydrofolate:folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PMCN06_0739 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMCN06_1728 pabA; para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PMCN06_1729 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PMCN06_1730 ilvE; IlvE protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PMCN06_1115 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMCN06_1116 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMCN06_1114 exsB; transcription regulator ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMCN06_0497 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMCN06_0655 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PMCN06_0654 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PMCN06_0652 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PMCN06_1320 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMCN06_0756 moeA; molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PMCN06_1572 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pmv00670]
D PMCN06_1478 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PMCN06_1377 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PMCN06_1071 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PMCN06_1290 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PMCN06_1074 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMCN06_1822 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMCN06_1227 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PMCN06_0951 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PMCN06_1058 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PMCN06_2125 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pmv00860]
D PMCN06_0042 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMCN06_0746 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PMCN06_0482 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMCN06_2166 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMCN06_1559 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PMCN06_1558 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PMCN06_2037 uroD; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PMCN06_1537 hemN; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PMCN06_1764 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D PMCN06_0859 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PMCN06_1557 hemX; uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PMCN06_0321 heme-binding protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D PMCN06_1268 HutZ protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pmv00130]
D PMCN06_0316 putative chorismate pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D PMCN06_1601 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PMCN06_1079 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D PMCN06_0758 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PMCN06_2120 visC; protein VisC K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D PMCN06_0914 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D PMCN06_2121 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D PMCN06_2172 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PMCN06_0228 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D PMCN06_1255 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PMCN06_1254 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PMCN06_1253 menH; acyl-CoA thioester hydrolase YfbB K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D PMCN06_0134 menC; O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PMCN06_0376 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PMCN06_0132 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PMCN06_0858 ybdB; esterase YbdB K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PMCN06_2294 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PMCN06_0965 quinone family NAD(P)H2 dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pmv00900]
D PMCN06_0559 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PMCN06_1335 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PMCN06_1873 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PMCN06_1048 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PMCN06_1874 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PMCN06_1314 gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PMCN06_2194 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PMCN06_0758 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PMCN06_0560 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PMCN06_0365 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PMCN06_1334 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PMCN06_2221 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PMCN06_1906 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PMCN06_0199 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PMCN06_1255 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D PMCN06_0199 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pmv00332]
D PMCN06_1475 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PMCN06_0297 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pmv00261]
D PMCN06_0296 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PMCN06_1190 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PMCN06_1903 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PMCN06_0177 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PMCN06_0788 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pmv00521]
D PMCN06_0335 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PMCN06_0199 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D PMCN06_0199 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pmv00401]
D PMCN06_0724 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_0912 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2263 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PMCN06_0614 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMCN06_0613 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PMCN06_1456 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMCN06_1455 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMCN06_1119 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:pmv00998]
D PMCN06_0181 ntdB; NTD biosynthesis operon putative hydrolase ntdB K18654 ntdB; kanosamine-6-phosphate phosphatase [EC:3.1.3.92]
D PMCN06_1454 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pmv00999]
D PMCN06_0202 metX; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PMCN06_1936 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D PMCN06_1681 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
C 00627 Aminobenzoate degradation [PATH:pmv00627]
D PMCN06_0415 acyP; Acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PMCN06_0758 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pmv00625]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D PMCN06_1912 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pmv00626]
D PMCN06_1717 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pmv03020]
D PMCN06_2034 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMCN06_2035 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMCN06_1647 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMCN06_0313 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pmv03010]
D PMCN06_0871 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PMCN06_1339 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PMCN06_1666 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PMCN06_1648 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PMCN06_1655 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PMCN06_2283 rps6; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PMCN06_2023 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PMCN06_1658 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PMCN06_0547 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PMCN06_1673 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PMCN06_1649 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PMCN06_2022 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PMCN06_1650 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PMCN06_1659 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PMCN06_0323 rps15; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PMCN06_1959 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PMCN06_1663 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PMCN06_2285 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PMCN06_1668 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PMCN06_2200 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PMCN06_2224 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PMCN06_2029 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PMCN06_1669 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PMCN06_1672 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PMCN06_1671 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PMCN06_1660 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PMCN06_1657 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PMCN06_2033 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMCN06_2286 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PMCN06_2032 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PMCN06_2028 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PMCN06_0546 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PMCN06_1662 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PMCN06_1653 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PMCN06_1665 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PMCN06_1646 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PMCN06_1656 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PMCN06_1962 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PMCN06_0633 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PMCN06_0366 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PMCN06_1667 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PMCN06_1670 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PMCN06_1661 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PMCN06_0669 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PMCN06_0367 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PMCN06_0011 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PMCN06_1664 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PMCN06_1654 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PMCN06_0020 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PMCN06_1076 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PMCN06_1459 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PMCN06_0012 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PMCN06_2301 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PMCN06_0632 rpmL; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PMCN06_1077 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMCN06_1651 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMCN06_r09 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r15 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r18 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r19 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pmv00970]
D PMCN06_t18 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t34 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t53 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t05 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t07 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t08 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t40 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t21 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMCN06_t51 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMCN06_t37 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMCN06_t38 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMCN06_t54 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMCN06_t10 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PMCN06_t27 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMCN06_t25 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMCN06_t48 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMCN06_t49 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMCN06_t46 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t23 tRNA-His K14226 tRNA-His; tRNA His
D PMCN06_t17 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMCN06_t35 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMCN06_t52 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMCN06_t28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t36 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMCN06_t14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMCN06_t29 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t16 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t30 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t56 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t50 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMCN06_t24 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMCN06_t39 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMCN06_t12 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t15 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t44 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMCN06_t47 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMCN06_t55 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PMCN06_t45 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMCN06_t26 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t01 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t02 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t04 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t03 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t43 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PMCN06_0042 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMCN06_0555 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMCN06_1952 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMCN06_0247 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMCN06_0673 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMCN06_0130 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMCN06_0126 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMCN06_0624 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMCN06_1035 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMCN06_1589 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D PMCN06_0287 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMCN06_0325 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMCN06_1822 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PMCN06_0889 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMCN06_2249 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMCN06_2196 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMCN06_1111 lysU; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMCN06_0581 rarS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMCN06_1620 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMCN06_1313 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMCN06_0661 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMCN06_0659 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMCN06_0819 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMCN06_1887 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pmv03060]
D PMCN06_1652 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMCN06_2026 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMCN06_1091 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PMCN06_1069 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PMCN06_1070 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PMCN06_1068 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMCN06_2298 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMCN06_2244 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMCN06_1691 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PMCN06_2280 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMCN06_1786 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMCN06_2169 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PMCN06_2168 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PMCN06_2167 tatC; crossover junction endoribonuclease subunit C K03118 tatC; sec-independent protein translocase protein TatC
D PMCN06_1245 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMCN06_2195 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pmv04122]
D PMCN06_0338 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMCN06_1761 cell developmental protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PMCN06_2021 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PMCN06_2020 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PMCN06_2019 tusD; intracellular sulfur oxidation protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PMCN06_0420 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PMCN06_2004 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMCN06_0652 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PMCN06_0655 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PMCN06_0653 moaD; molybdopterin synthase small subunit K03636 moaD; sulfur-carrier protein
D PMCN06_0757 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PMCN06_0654 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PMCN06_1320 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PMCN06_0565 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pmv03018]
D PMCN06_1224 rppH; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PMCN06_0239 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMCN06_1450 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PMCN06_1501 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMCN06_0114 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMCN06_1368 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMCN06_0116 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMCN06_1686 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMCN06_1451 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_0798 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PMCN06_0121 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMCN06_0983 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMCN06_0941 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pmv03030]
D PMCN06_1197 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMCN06_1277 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMCN06_0383 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMCN06_2184 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMCN06_2247 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMCN06_0272 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMCN06_0894 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMCN06_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMCN06_2073 putative replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMCN06_0431 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMCN06_2223 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMCN06_2057 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0051 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1372 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1387 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1196 rnh; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMCN06_1325 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMCN06_0163 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMCN06_2141 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pmv03410]
D PMCN06_0400 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMCN06_1242 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PMCN06_1986 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PMCN06_0017 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMCN06_1866 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PMCN06_0753 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PMCN06_0163 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMCN06_1108 recJ; recombination protein J K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMCN06_2141 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pmv03420]
D PMCN06_0188 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMCN06_1371 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PMCN06_0449 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMCN06_0934 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PMCN06_0430 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMCN06_0163 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMCN06_2141 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pmv03430]
D PMCN06_1541 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D PMCN06_0981 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D PMCN06_0161 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D PMCN06_0430 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMCN06_0641 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PMCN06_1133 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PMCN06_0561 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PMCN06_1108 recJ; recombination protein J K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMCN06_2057 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0051 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1372 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1387 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1277 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMCN06_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMCN06_0383 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMCN06_2247 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMCN06_2184 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMCN06_1197 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMCN06_0894 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMCN06_0272 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMCN06_2141 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMCN06_2114 dam; putative adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_2241 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pmv03440]
D PMCN06_1108 recJ; recombination protein J K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMCN06_2057 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0051 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1372 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1387 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0003 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D PMCN06_1505 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D PMCN06_1093 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PMCN06_1554 recA; recombinase A K03553 recA; recombination protein RecA
D PMCN06_0163 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMCN06_0253 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D PMCN06_0254 ruvB; Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMCN06_0252 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMCN06_0315 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMCN06_0542 recB; exodeoxyribonuclease V beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMCN06_0270 recC; exodeoxyribonuclease V gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMCN06_0543 recD; exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMCN06_1277 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMCN06_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMCN06_0383 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMCN06_2247 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMCN06_2184 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMCN06_1197 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMCN06_0894 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMCN06_0272 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMCN06_0027 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMCN06_2284 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D PMCN06_0240 hypothetical protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pmv02010]
D PMCN06_1928 thiY; ABC superfamily ATP binding cassette transporter, binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PMCN06_1930 thiX; ABC superfamily ATP binding cassette transporter, membrane protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PMCN06_1931 thiZ; ABC superfamily ATP binding cassette transporter, ABC protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PMCN06_0016 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMCN06_0120 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMCN06_0807 modA; molybdate ABC superfamily ATP binding cassette transporter, binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMCN06_0119 modB; molybdate transport system permease protein K02018 modB; molybdate transport system permease protein
D PMCN06_0806 modB; molybdate ABC transporter permease protein K02018 modB; molybdate transport system permease protein
D PMCN06_0805 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMCN06_0118 afuC; iron(III) transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMCN06_0968 modF; putative molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D PMCN06_0276 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_0279 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_1257 afuA; periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_1721 afuA; extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_1097 iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_0275 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D PMCN06_1258 afuB; iron-uptake permease inner membrane protein K02011 afuB; iron(III) transport system permease protein
D PMCN06_1719 afuB2; Fe(3+) ions transport system permease protein AfuB-2 K02011 afuB; iron(III) transport system permease protein
D PMCN06_1259 afuC; iron(III) ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_1720 fbpC2; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_0274 afuC; ferric transporter ATP-binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_1718 potA; ABC-type spermidine/putrescine transport system K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_0395 tbpA; thiamine transport system substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D PMCN06_0396 thiP; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D PMCN06_0397 thiQ; thiamine transport system ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PMCN06_1032 potD1; spermidine/putrescine-binding periplasmic protein PotD1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMCN06_1033 potD2; spermidine/putrescine-binding periplasmic protein PotD2 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMCN06_1641 potD3; spermidine/putrescine-binding periplasmic protein PotD3 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMCN06_1031 potC; spermidine/putrescine ABC transporter membrane protein K11070 potC; spermidine/putrescine transport system permease protein
D PMCN06_1030 potB; spermidine/putrescine ABC transporter membrane protein K11071 potB; spermidine/putrescine transport system permease protein
D PMCN06_1029 potA; putrescine/spermidine ABC transporter ATPase protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PMCN06_1124 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PMCN06_1125 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMCN06_1126 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMCN06_1123 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PMCN06_1127 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, ABC protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMCN06_1913 ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1634 rbsB; ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1149 rbsB; D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1992 rbsB; ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1148 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein
D PMCN06_1994 rbsC; RbsC K10440 rbsC; ribose transport system permease protein
D PMCN06_1914 rbsC; ribose ABC superfamily ATP binding cassette transporter K10440 rbsC; ribose transport system permease protein
D PMCN06_1635 rbsC; ribose ABC superfamily ATP binding cassette transporter, permease protein K10440 rbsC; ribose transport system permease protein
D PMCN06_1915 mglA; ribose ABC superfamily ATP binding cassette transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1147 rbsA; D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1993 rbsA; galactoside ABC superfamily ATP binding cassette transporter, ABC protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1636 rbsA; ribose ABC superfamily ATP binding cassette transporter, ABC protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1146 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PMCN06_0191 mglB; methyl-galactoside transport system substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PMCN06_0189 mglC; beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D PMCN06_0190 mglA; galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D PMCN06_1625 xylF; D-xylose-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D PMCN06_1627 xylH; xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D PMCN06_1626 xylG; xylose import ATP-binding protein XylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D PMCN06_0456 pstS; Phosphate-binding protein pstS K02040 pstS; phosphate transport system substrate-binding protein
D PMCN06_0455 pstC; phosphate ABC superfamily ATP binding cassette transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PMCN06_0454 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein
D PMCN06_0453 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMCN06_1179 artI; arginine ABC superfamily ATP binding cassette transporter, binding protein K09997 artI; arginine transport system substrate-binding protein
D PMCN06_1177 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D PMCN06_1178 artQ; arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein
D PMCN06_1180 artP; arginine transporter ATP-binding subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D PMCN06_2042 metQ; D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D PMCN06_2043 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D PMCN06_2044 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D PMCN06_1461 oppA; oligopeptide ABC superfamily ATP binding cassette transporter, binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMCN06_1462 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D PMCN06_1463 oppC; oligopeptide ABC superfamily ATP binding cassette transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMCN06_1464 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PMCN06_1465 oppF; GTPase EngB K10823 oppF; oligopeptide transport system ATP-binding protein
D PMCN06_1057 dppA; dipeptide ABC superfamily ATP binding cassette transporter, binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMCN06_0622 dppA; Heme-binding protein A K12368 dppA; dipeptide transport system substrate-binding protein
D PMCN06_1056 dppB; dipeptide ABC superfamily ATP binding cassette transporter, permease protein K12369 dppB; dipeptide transport system permease protein
D PMCN06_1055 dppC; dipeptide ABC superfamily ATP binding cassette transporter, membrane protein K12370 dppC; dipeptide transport system permease protein
D PMCN06_1054 dppD; dipeptide transporter ATP-binding subunit K12371 dppD; dipeptide transport system ATP-binding protein
D PMCN06_1053 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein
D PMCN06_0989 sapA; peptide ABC superfamily ATP binding cassette transporter, binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMCN06_0990 sapB; ABC-type antimicrobial peptide transport system K19227 sapB; cationic peptide transport system permease protein
D PMCN06_0991 sapC; ABC-type antimicrobial peptide transport system K19228 sapC; cationic peptide transport system permease protein
D PMCN06_0992 sapD; ABC-type antimicrobial peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D PMCN06_0993 sapF; ABC-type antimicrobial peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D PMCN06_1172 fecB; iron-dicitrate transporter substrate-binding subunit K23181 fecB; ferric citrate transport system substrate-binding protein
D PMCN06_1174 fepD; iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein
D PMCN06_1173 fepD; iron-dicitrate transporter permease subunit K23183 fecC; ferric citrate transport system permease protein
D PMCN06_1175 fepC; iron-dicitrate transporter ATP-binding subunit K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D PMCN06_0307 znuA; high-affinity zinc transporter periplasmic component K09815 znuA; zinc transport system substrate-binding protein
D PMCN06_1052 znuB; zinc ABC superfamily ATP binding cassette transporter, membrane protein K09816 znuB; zinc transport system permease protein
D PMCN06_1051 znuC; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PMCN06_0419 sitA; manganese/iron transport system substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PMCN06_0417 sitC; manganese/iron transport system permease protein K11605 sitC; manganese/iron transport system permease protein
D PMCN06_0416 sitD; manganese/iron transport system permease protein K11606 sitD; manganese/iron transport system permease protein
D PMCN06_0418 sitB; manganese/iron transport system ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PMCN06_1942 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D PMCN06_1940 lsrC; autoinducer 2 import system permease protein lsrC K10556 lsrC; AI-2 transport system permease protein
D PMCN06_1941 lsrD; autoinducer 2 import system permease protein lsrD K10557 lsrD; AI-2 transport system permease protein
D PMCN06_1939 lsrA; autoinducer 2 import ATP-binding protein lsrA K10558 lsrA; AI-2 transport system ATP-binding protein
D PMCN06_0849 hexC; HexC,Capsule polysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PMCN06_0850 hexB; HexB K09688 kpsM; capsular polysaccharide transport system permease protein
D PMCN06_0851 hexA; ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PMCN06_0590 lolC; lipoprotein ABC superfamily ATP binding cassette transporter, membrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PMCN06_0592 lolC; outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D PMCN06_0591 lolD; lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PMCN06_1302 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D PMCN06_1303 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D PMCN06_1304 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PMCN06_1305 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PMCN06_1104 lptF; inner membrane protein YjgP K07091 lptF; lipopolysaccharide export system permease protein
D PMCN06_1103 lptG; YjgP/YjgQ family membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D PMCN06_1130 lptB; lipopolysaccharide ABC superfamily ATP binding cassette transporter, ABC protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMCN06_1788 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PMCN06_1787 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PMCN06_0938 msbA; lipid transporter ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PMCN06_1968 acyl-phosphate glycerol 3-phosphate acyltransferase K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMCN06_0601 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PMCN06_0602 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PMCN06_0234 ABC-type antimicrobial peptide transport system, permease component K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PMCN06_1269 yddA; ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PMCN06_0156 yddA; ABC superfamily ATP binding cassette transporter, membrane protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pmv02060]
D PMCN06_0975 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PMCN06_0976 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PMCN06_0974 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMCN06_1599 ptsG; PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMCN06_0954 nagE; PTS family N-acetylglucosamine porter, IICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMCN06_1525 scrA; PTS system mannose/fructose family transporter subunit IIB K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PMCN06_1839 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PMCN06_0167 mtlA; PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMCN06_0908 manX; PTS family mannose porter, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMCN06_0907 manY; PTS family mannose porter, IIC component K02795 manY; mannose PTS system EIIC component
D PMCN06_0906 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D PMCN06_1354 srlB; glucitol/sorbitol-specific PTS system component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PMCN06_1353 srlE; PTS family glucitol/sorbitol porter component IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PMCN06_1352 srlA; PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component
D PMCN06_0829 ulaC; ascorbate-specific phosphotransferase enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMCN06_0828 ulaA; ascorbate-specific PTS system enzyme IIC/IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMCN06_1574 fruB; bifunctional fructose-specific PTS IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D PMCN06_1575 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PMCN06_1131 ptsN; PTS family porter K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pmv03070]
D PMCN06_1069 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PMCN06_1070 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PMCN06_2026 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMCN06_1091 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PMCN06_1652 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMCN06_1068 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMCN06_2298 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMCN06_2244 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMCN06_1786 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMCN06_1691 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PMCN06_2280 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMCN06_2169 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PMCN06_2168 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PMCN06_2167 tatC; crossover junction endoribonuclease subunit C K03118 tatC; sec-independent protein translocase protein TatC
D PMCN06_1549 ppkA; PpkA protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pmv02020]
D PMCN06_0451 phoR; phosphate regulon sensor histidine kinase protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMCN06_0452 phoB; phosphate regulon response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMCN06_0456 pstS; Phosphate-binding protein pstS K02040 pstS; phosphate transport system substrate-binding protein
D PMCN06_1483 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMCN06_1484 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMCN06_1082 qseC; sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PMCN06_1083 qseB; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D PMCN06_1579 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PMCN06_1578 torA; Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMCN06_1577 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PMCN06_0333 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMCN06_1078 arcA; two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PMCN06_2177 Tripartite tricarboxylate transporter TctA family K07793 tctA; putative tricarboxylic transport membrane protein
D PMCN06_2178 putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMCN06_2179 Tripartite tricarboxylate transporter family receptor K07795 tctC; putative tricarboxylic transport membrane protein
D PMCN06_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PMCN06_1693 dcuB2; anaerobic C4-dicarboxylate transporter DcuB-2 K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PMCN06_1453 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PMCN06_1856 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PMCN06_1561 narP; nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PMCN06_1099 frdA; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PMCN06_1100 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PMCN06_1101 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D PMCN06_1102 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D PMCN06_2006 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMCN06_2007 uhpB; sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PMCN06_2008 uhpA; transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PMCN06_2009 uhpT; sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D PMCN06_1953 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D PMCN06_0931 flp1; flp operon protein Flp1 K02651 flp; pilus assembly protein Flp/PilA
D PMCN06_0927 rcpA; type II/IV secretion system secretin RcpA/CpaC K02280 cpaC; pilus assembly protein CpaC
D PMCN06_0925 flp operon protein D K02282 cpaE; pilus assembly protein CpaE
D PMCN06_0924 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMCN06_0923 tadB; Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PMCN06_0922 tadC; Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PMCN06_0480 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D PMCN06_1319 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PMCN06_2288 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMCN06_1722 pgtC; phosphoglycerate transport regulatory protein K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D PMCN06_1723 pgtB; Phosphoglycerate transport system sensor protein pgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PMCN06_1724 pgtA; two component Fis family transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D PMCN06_1017 dctP; putative C4 dicarboxylate binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PMCN06_1018 dctQ; Tripartite ATP-independent periplasmic transporters, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PMCN06_1019 putative C4-dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PMCN06_0786 dctB; sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D PMCN06_0787 ttrR; tetrathionate reductase regulon response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D PMCN06_0783 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D PMCN06_0785 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D PMCN06_0784 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D PMCN06_0005 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMCN06_0256 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PMCN06_0257 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PMCN06_0848 hexD; HexD, capsule biosynthetic locus protein K01991 wza; polysaccharide biosynthesis/export protein
D PMCN06_0214 wza; polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein
D PMCN06_0213 amsI; low molecular weight protein-tyrosine-phosphatase AmsI K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PMCN06_1831 yfkJ; low molecular weight protein-tyrosine-phosphatase yfkj K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PMCN06_0212 wzs; Wzs K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PMCN06_0875 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pmv02024]
D PMCN06_0174 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PMCN06_0983 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMCN06_0614 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PMCN06_0613 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PMCN06_0593 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMCN06_0725 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PMCN06_1082 qseC; sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PMCN06_1083 qseB; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D PMCN06_1942 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D PMCN06_1940 lsrC; autoinducer 2 import system permease protein lsrC K10556 lsrC; AI-2 transport system permease protein
D PMCN06_1941 lsrD; autoinducer 2 import system permease protein lsrD K10557 lsrD; AI-2 transport system permease protein
D PMCN06_1939 lsrA; autoinducer 2 import ATP-binding protein lsrA K10558 lsrA; AI-2 transport system ATP-binding protein
D PMCN06_1937 lsrK; autoinducer 2 kinase lsrK K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D PMCN06_1938 lsrR; transcriptional regulator lsrR K11531 lsrR; lsr operon transcriptional repressor
D PMCN06_1943 aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D PMCN06_1944 lsrG; autoinducer-2 (AI-2) modifying protein LsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D PMCN06_1897 putative ABC transporter solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PMCN06_1898 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PMCN06_1899 potB; PotB protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PMCN06_1900 potA; MalK protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PMCN06_0308 fadD; long-chain acyl--CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_0766 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_0005 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMCN06_0739 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PMCN06_0813 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PMCN06_1481 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PMCN06_1461 oppA; oligopeptide ABC superfamily ATP binding cassette transporter, binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMCN06_1462 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D PMCN06_1463 oppC; oligopeptide ABC superfamily ATP binding cassette transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMCN06_1464 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PMCN06_1465 oppF; GTPase EngB K10823 oppF; oligopeptide transport system ATP-binding protein
D PMCN06_0740 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMCN06_2298 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMCN06_2026 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMCN06_1091 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PMCN06_1652 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMCN06_1068 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMCN06_2244 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMCN06_1786 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMCN06_1691 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PMCN06_2280 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pmv02030]
D PMCN06_1913 ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1634 rbsB; ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1149 rbsB; D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1992 rbsB; ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_0191 mglB; methyl-galactoside transport system substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PMCN06_1057 dppA; dipeptide ABC superfamily ATP binding cassette transporter, binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMCN06_0622 dppA; Heme-binding protein A K12368 dppA; dipeptide transport system substrate-binding protein
C 02040 Flagellar assembly
D PMCN06_2222 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PMCN06_1501 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pmv01501]
D PMCN06_1008 beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PMCN06_1236 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PMCN06_1461 oppA; oligopeptide ABC superfamily ATP binding cassette transporter, binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMCN06_1462 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D PMCN06_1463 oppC; oligopeptide ABC superfamily ATP binding cassette transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMCN06_1464 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PMCN06_1465 oppF; GTPase EngB K10823 oppF; oligopeptide transport system ATP-binding protein
D PMCN06_0029 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D PMCN06_0030 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PMCN06_0032 acrB; RND superfamily resistance-nodulation-cell division acriflavin/drug:proton (H+) antiporter K18138 acrB; multidrug efflux pump
D PMCN06_2233 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMCN06_1447 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMCN06_1166 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pmv01502]
D PMCN06_1158 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMCN06_0432 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PMCN06_1164 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PMCN06_1163 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMCN06_1160 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pmv01503]
D PMCN06_0187 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PMCN06_0989 sapA; peptide ABC superfamily ATP binding cassette transporter, binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMCN06_0990 sapB; ABC-type antimicrobial peptide transport system K19227 sapB; cationic peptide transport system permease protein
D PMCN06_0991 sapC; ABC-type antimicrobial peptide transport system K19228 sapC; cationic peptide transport system permease protein
D PMCN06_0992 sapD; ABC-type antimicrobial peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D PMCN06_0993 sapF; ABC-type antimicrobial peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D PMCN06_1483 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMCN06_1484 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMCN06_0980 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMCN06_1570 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMCN06_1107 thioredoxin fold protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMCN06_0030 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PMCN06_0032 acrB; RND superfamily resistance-nodulation-cell division acriflavin/drug:proton (H+) antiporter K18138 acrB; multidrug efflux pump
D PMCN06_1327 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pmv01000]
C 01001 Protein kinases [BR:pmv01001]
D PMCN06_1549 ppkA; PpkA protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D PMCN06_0212 wzs; Wzs K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PMCN06_0451 phoR; phosphate regulon sensor histidine kinase protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMCN06_1483 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMCN06_1082 qseC; sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PMCN06_0333 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMCN06_1856 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PMCN06_2007 uhpB; sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PMCN06_1723 pgtB; Phosphoglycerate transport system sensor protein pgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PMCN06_0786 dctB; sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pmv01009]
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_0206 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PMCN06_2202 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pmv01002]
D PMCN06_2195 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PMCN06_1218 hopD; prepilin peptidase K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
D PMCN06_0999 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PMCN06_0657 nlpC; lipoprotein NlpC K13695 nlpC; probable lipoprotein NlpC
D PMCN06_0760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PMCN06_2040 glmS; glucosamine--fructose-6-phosphate aminotransferase isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PMCN06_1023 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PMCN06_0648 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PMCN06_0742 dcp; Zn-dependent oligopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D PMCN06_0874 pqqL; PqqL K07263 pqqL; zinc protease [EC:3.4.24.-]
D PMCN06_1105 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PMCN06_0200 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D PMCN06_0301 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PMCN06_0208 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PMCN06_1028 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PMCN06_1618 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PMCN06_1964 abgA; aminobenzoyl-glutamate utilization protein A K12940 abgA; aminobenzoyl-glutamate utilization protein A
D PMCN06_1050 M23 family peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PMCN06_0479 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PMCN06_2122 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PMCN06_0458 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMCN06_0489 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PMCN06_1332 rseP; peptidase EcfE K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PMCN06_0379 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PMCN06_0796 degQ; Trypsin-like serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D PMCN06_0812 DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D PMCN06_1444 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMCN06_0776 dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMCN06_1347 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PMCN06_1345 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PMCN06_0504 S16 family peptidase K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D PMCN06_2282 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMCN06_1245 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PMCN06_1024 prc; carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PMCN06_0732 sppA; protease IV (signal peptide peptidase) K04773 sppA; protease IV [EC:3.4.21.-]
D PMCN06_0615 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D PMCN06_0474 pepE; Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PMCN06_1855 pepE; peptidase E, putative K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PMCN06_1697 glpG; rhomboid protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PMCN06_1604 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PMCN06_1060 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PMCN06_1183 pmbA; peptide maturation protein PmbA K03592 pmbA; PmbA protein
D PMCN06_0362 tldD; U62 family peptidase 2 TldD K03568 tldD; TldD protein
D PMCN06_0717 membrane protein K06894 yfhM; alpha-2-macroglobulin
D PMCN06_1185 hflC; FtsH protease regulator HflC K04087 hflC; modulator of FtsH protease HflC
D PMCN06_1186 hflK; FtsH protease regulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:pmv01003]
D PMCN06_0534 lst; CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase K00785 lst; N-acetyllactosaminide alpha-2,3-sialyltransferase [EC:2.4.3.6]
D PMCN06_1112 alpha-2,3/2,6-sialyltransferase/sialidase K12248 bst; beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 0160) [EC:2.4.3.1]
D PMCN06_0574 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PMCN06_0344 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PMCN06_0674 ponC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PMCN06_0476 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMCN06_2233 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMCN06_0483 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pmv01005]
D PMCN06_1327 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PMCN06_1326 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PMCN06_1154 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PMCN06_1329 firA; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PMCN06_1202 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PMCN06_0937 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PMCN06_0963 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PMCN06_0381 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D PMCN06_1972 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PMCN06_0187 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D PMCN06_1970 kdtA; 3-deoxy-D-manno-octulosonic-acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D PMCN06_0588 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PMCN06_0935 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PMCN06_0550 kdsC; 3-deoxy-manno-octulosonate-8-phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PMCN06_0551 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PMCN06_1528 waaC; ADP-heptose--LPS heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PMCN06_1973 group 2 glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D PMCN06_1527 waaF; ADP-heptose--LPS heptosyltransferase 2 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PMCN06_1509 rfaL; RfaL protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PMCN06_1969 opsX; glycosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D PMCN06_1181 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PMCN06_2045 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PMCN06_0962 rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D PMCN06_2010 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PMCN06_0483 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmv01011]
D PMCN06_1121 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PMCN06_1854 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PMCN06_1159 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PMCN06_1162 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PMCN06_1165 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PMCN06_1158 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PMCN06_0432 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PMCN06_0317 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PMCN06_1163 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PMCN06_1160 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PMCN06_2198 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PMCN06_2233 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PMCN06_0476 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D PMCN06_0674 ponC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PMCN06_1447 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PMCN06_1166 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMCN06_1444 dacA; D-alanyl-D-alanine carboxypeptidase DacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PMCN06_0776 dacB; D-alanyl-D-alanine carboxypeptidase/endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PMCN06_0344 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PMCN06_1023 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PMCN06_0379 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D PMCN06_1050 M23 family peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PMCN06_0346 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PMCN06_0305 mltA; murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D PMCN06_0539 hypothetical protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D PMCN06_1988 mltC; Membrane-bound lytic murein transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D PMCN06_1265 mltF; membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PMCN06_2186 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PMCN06_1445 RlpA-like protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PMCN06_0980 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMCN06_1223 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pmv01004]
D PMCN06_1456 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PMCN06_1457 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PMCN06_0358 fabB; 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D PMCN06_1455 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PMCN06_0505 fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D PMCN06_1328 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PMCN06_1119 fabI; enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PMCN06_0600 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PMCN06_0348 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D PMCN06_0754 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PMCN06_0308 fadD; long-chain acyl--CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_0766 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_2281 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PMCN06_1458 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PMCN06_2162 plsY; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PMCN06_1201 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pmv01008]
C 01006 Prenyltransferases [BR:pmv01006]
D PMCN06_0560 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D PMCN06_0365 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PMCN06_1334 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PMCN06_0982 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMCN06_2294 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PMCN06_1601 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:pmv01007]
D PMCN06_0042 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMCN06_0555 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMCN06_0819 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMCN06_1887 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMCN06_0287 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMCN06_0581 rarS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMCN06_0325 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMCN06_2196 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMCN06_0889 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMCN06_2249 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMCN06_1111 lysU; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMCN06_0247 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMCN06_0673 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMCN06_1313 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMCN06_0130 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMCN06_0126 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMCN06_1035 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMCN06_1620 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMCN06_0624 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMCN06_1952 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMCN06_0661 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMCN06_0659 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMCN06_0651 aspC; aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PMCN06_1256 alaA; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D PMCN06_0912 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_2263 hisH; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PMCN06_1470 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PMCN06_1623 patB; aspartate transaminase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PMCN06_0363 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PMCN06_1471 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PMCN06_0482 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PMCN06_0596 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PMCN06_0911 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pmv00194]
D PMCN06_1760 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PMCN06_1759 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PMCN06_1758 atpG; ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PMCN06_1757 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PMCN06_1756 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PMCN06_1755 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PMCN06_1754 atpE; ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PMCN06_1753 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMCN06_1752 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pmv03000]
D PMCN06_1791 hpaA; AraC family transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D PMCN06_0597 gcvA; DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D PMCN06_1948 DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D PMCN06_0441 metR; HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D PMCN06_2014 oxyR; DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PMCN06_0718 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D PMCN06_2012 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D PMCN06_1698 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D PMCN06_1359 srlR; DNA-bindng transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D PMCN06_0826 ulaR; transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D PMCN06_0192 galR; HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMCN06_1151 rbsR; transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMCN06_1628 xylR; xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PMCN06_0945 fruR; DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D PMCN06_1524 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D PMCN06_0577 purR; DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D PMCN06_0861 transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D PMCN06_1260 fadR; fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D PMCN06_2232 yhdI; HTH-type transcriptional regulator YhdI K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PMCN06_0029 TetR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D PMCN06_0007 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
D PMCN06_2013 fabR; DNA-binding transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D PMCN06_1836 asnC; DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PMCN06_1039 lrp; leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PMCN06_0371 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PMCN06_1921 yiaJ; HTH-type transcriptional regulator YiaJ K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
D PMCN06_0005 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PMCN06_0729 fnr; fumarate/nitrate reduction transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PMCN06_0337 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D PMCN06_1746 ArsR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D PMCN06_1841 murR; HTH-type transcriptional regulator MurR K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D PMCN06_0996 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PMCN06_0142 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMCN06_0345 trpR; Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D PMCN06_0438 nlp; putative transcriptional regulator K07724 ner; Ner family transcriptional regulator
D PMCN06_1644 nadR; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D PMCN06_0810 modE; transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D PMCN06_2069 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator
D PMCN06_1405 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator
D PMCN06_0696 hypothetical protein K07729 K07729; putative transcriptional regulator
D PMCN06_1955 metJ; transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D PMCN06_0619 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PMCN06_1991 bolA; regulator of penicillin binding proteins and beta lactamase transcription K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D PMCN06_0579 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PMCN06_0745 nagC; N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D PMCN06_0672 mlc; NagC-like transcriptional regulator Mlc K15545 mlc; transcriptional regulator of PTS gene
D PMCN06_0165 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor
D PMCN06_1929 tenA; TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PMCN06_0986 tyrR; transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D PMCN06_1938 lsrR; transcriptional regulator lsrR K11531 lsrR; lsr operon transcriptional repressor
D PMCN06_2255 pyrR; pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PMCN06_0710 hypothetical protein K07733 alpA; prophage regulatory protein
D PMCN06_1503 YqgE like protein K07735 algH; putative transcriptional regulator
D PMCN06_0940 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PMCN06_0814 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PMCN06_1169 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pmv03021]
D PMCN06_1647 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMCN06_2034 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMCN06_2035 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMCN06_0313 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMCN06_2222 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PMCN06_1090 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PMCN06_1583 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PMCN06_1848 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D PMCN06_1533 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D PMCN06_0824 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PMCN06_0792 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PMCN06_2027 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PMCN06_0548 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D PMCN06_0549 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D PMCN06_1584 rseA; sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D PMCN06_1585 rseB; periplasmic negative regulator of sigmaE K03598 rseB; sigma-E factor negative regulatory protein RseB
D PMCN06_1586 rseC; sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D PMCN06_0940 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PMCN06_0775 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PMCN06_1714 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D PMCN06_1451 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pmv03019]
D PMCN06_0239 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMCN06_0361 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PMCN06_1246 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMCN06_1368 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMCN06_0978 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PMCN06_1450 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D PMCN06_0116 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMCN06_1686 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMCN06_1501 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMCN06_0114 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PMCN06_1451 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PMCN06_1238 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PMCN06_0798 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PMCN06_0121 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMCN06_0983 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMCN06_0941 pcnB; polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PMCN06_1224 rppH; dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D PMCN06_1953 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D PMCN06_2295 menG; ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A
D PMCN06_1827 hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D PMCN06_1132 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
D PMCN06_0838 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pmv03011]
D PMCN06_0871 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PMCN06_1339 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PMCN06_1666 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PMCN06_1648 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PMCN06_1655 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PMCN06_2283 rps6; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PMCN06_2023 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PMCN06_1658 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PMCN06_0547 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PMCN06_1673 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PMCN06_1649 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PMCN06_2022 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PMCN06_1650 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PMCN06_1659 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PMCN06_0323 rps15; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PMCN06_1959 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PMCN06_1663 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PMCN06_2285 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PMCN06_1668 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PMCN06_2200 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PMCN06_2224 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PMCN06_2029 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PMCN06_1669 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PMCN06_1672 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PMCN06_1671 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PMCN06_1660 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PMCN06_1657 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PMCN06_2286 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PMCN06_2032 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PMCN06_2028 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PMCN06_2033 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PMCN06_0546 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PMCN06_1662 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PMCN06_1653 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PMCN06_1665 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PMCN06_1646 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PMCN06_1656 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PMCN06_1962 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PMCN06_0633 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PMCN06_0366 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PMCN06_1667 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PMCN06_1670 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PMCN06_1661 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PMCN06_0367 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PMCN06_0011 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PMCN06_1664 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PMCN06_1654 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PMCN06_0020 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PMCN06_1076 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PMCN06_1459 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PMCN06_0012 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PMCN06_2301 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PMCN06_0632 rpmL; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PMCN06_1077 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMCN06_1651 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PMCN06_0669 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PMCN06_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r15 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r18 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r19 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r09 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pmv03009]
D PMCN06_1246 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMCN06_0978 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PMCN06_1247 era; GTP-binding protein Era K03595 era; GTPase
D PMCN06_0370 obg; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PMCN06_0940 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PMCN06_0824 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PMCN06_0792 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D PMCN06_2027 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PMCN06_1307 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PMCN06_2253 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PMCN06_1823 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PMCN06_0273 rsmC; 16S ribosomal RNA m2G1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PMCN06_1783 rsmD; ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PMCN06_1504 rsmE; 16S rRNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PMCN06_1751 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMCN06_1168 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PMCN06_0675 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PMCN06_1567 smtA; metallothionein SmtA K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PMCN06_1369 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PMCN06_0457 ftsJ; 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D PMCN06_1448 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PMCN06_2229 protein OrfJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D PMCN06_0326 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D PMCN06_0598 putative RNA 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PMCN06_1317 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PMCN06_1506 rumA; 23S rRNA 5-methyluridine methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PMCN06_1237 rumB; 23S rRNA (uracil-5-)-methyltransferase RumB K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D PMCN06_0663 ribosomal large subunit pseudouridine synthase C K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMCN06_1534 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMCN06_0719 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PMCN06_0238 rluC; 23S rRNA pseudouridylate synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D PMCN06_2127 sfb; 23S rRNA pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PMCN06_1870 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PMCN06_1514 hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D PMCN06_0271 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PMCN06_0899 rimK; Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PMCN06_1960 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D PMCN06_1834 miaB; MiaB family RNA modification enzyme K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PMCN06_0749 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D PMCN06_0140 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PMCN06_0409 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D PMCN06_1134 cupin 4 K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PMCN06_0239 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PMCN06_0361 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PMCN06_1502 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PMCN06_0116 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PMCN06_1530 srmB; ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D PMCN06_0977 rsgA; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PMCN06_1198 engA; GTP-binding protein EngA K03977 engA; GTPase
D PMCN06_1935 rimN; ribosome maturation factor RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMCN06_0314 spoT; guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PMCN06_0821 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PMCN06_0825 rimP; Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D PMCN06_1449 ribosome-associated, Iojap-like family protein K09710 ybeB; ribosome-associated protein
D PMCN06_0183 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D PMCN06_0772 RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D PMCN06_1184 hypothetical protein K09889 yjgA; ribosome-associated protein
D PMCN06_1212 raiA; ribosome-associated inhibitor A K05809 raiA; ribosome-associated inhibitor A
D PMCN06_1138 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D PMCN06_1460 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pmv03016]
D PMCN06_1512 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D PMCN06_1046 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PMCN06_0042 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMCN06_1620 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PMCN06_2196 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PMCN06_2249 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMCN06_0325 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PMCN06_0555 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PMCN06_0581 rarS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMCN06_1111 lysU; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PMCN06_0247 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMCN06_1952 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PMCN06_0673 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PMCN06_0624 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PMCN06_1035 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PMCN06_0287 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PMCN06_0889 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PMCN06_1313 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PMCN06_0661 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PMCN06_0659 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PMCN06_0819 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMCN06_1887 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PMCN06_1881 dtd; D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PMCN06_1234 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMCN06_1984 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PMCN06_2293 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PMCN06_0667 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PMCN06_0820 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PMCN06_1875 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D PMCN06_0338 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMCN06_1935 rimN; ribosome maturation factor RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PMCN06_0982 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PMCN06_2297 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PMCN06_1750 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMCN06_0860 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PMCN06_1810 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D PMCN06_2300 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PMCN06_0242 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D PMCN06_1495 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PMCN06_1120 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PMCN06_0765 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PMCN06_0445 uup; putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PMCN06_0130 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PMCN06_0126 glyS; glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PMCN06_0506 ebsC; YbaK/EbsC family protein EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PMCN06_1228 tadA2; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PMCN06_1676 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D PMCN06_0141 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PMCN06_1491 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PMCN06_0229 miaB; tRNA-I(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PMCN06_0245 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PMCN06_0359 cmoB; tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D PMCN06_1568 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D PMCN06_1961 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PMCN06_1514 hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D PMCN06_0336 lasT; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D PMCN06_1779 cspR; RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PMCN06_1531 tRNA (adenine-N(6)-)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PMCN06_0500 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D PMCN06_0663 ribosomal large subunit pseudouridine synthase C K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMCN06_1534 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PMCN06_2004 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PMCN06_0636 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PMCN06_1761 cell developmental protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D PMCN06_2021 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D PMCN06_2020 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D PMCN06_2019 tusD; intracellular sulfur oxidation protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D PMCN06_0420 tusE; sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D PMCN06_0340 iscA; iron-binding protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D PMCN06_1497 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D PMCN06_0357 mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D PMCN06_1064 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PMCN06_1114 exsB; transcription regulator ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PMCN06_1115 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PMCN06_1116 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PMCN06_0497 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PMCN06_0364 protein of hypothetical function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D PMCN06_1067 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PMCN06_0565 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PMCN06_1004 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PMCN06_0185 ypfI; protein YpfI K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D PMCN06_0768 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PMCN06_2225 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PMCN06_0979 ATPase with strong ADP affinity K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PMCN06_0306 ThiF domain protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PMCN06_1368 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PMCN06_0114 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pmv03012]
D PMCN06_0866 eif1; translation initiation factor 1 K03113 EIF1; translation initiation factor 1
D PMCN06_0823 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PMCN06_0631 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PMCN06_1846 ABC superfamily ATP binding cassette transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PMCN06_1338 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PMCN06_2025 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D PMCN06_1607 tufA2; elongation factor Tu-A-2 K02358 tuf; elongation factor Tu
D PMCN06_2024 fusA; elongation factor G K02355 fusA; elongation factor G
D PMCN06_1591 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D PMCN06_0585 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PMCN06_1336 errF; ribosome recycling factor K02838 frr; ribosome recycling factor
D PMCN06_0586 hemK; protein methyltransferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PMCN06_1137 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PMCN06_0198 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PMCN06_1204 efp; elongation factor P K02356 efp; elongation factor P
D PMCN06_1098 lysU; lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PMCN06_1205 kamA; KamA family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D PMCN06_0490 transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D PMCN06_1110 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PMCN06_0887 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PMCN06_0035 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:pmv03110]
D PMCN06_2153 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PMCN06_1346 clpX; ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PMCN06_1605 hslU; ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PMCN06_0206 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PMCN06_0798 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PMCN06_0342 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D PMCN06_0121 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMCN06_0803 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMCN06_1493 djlA; DNA-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D PMCN06_0341 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D PMCN06_1809 Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D PMCN06_0354 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D PMCN06_1808 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D PMCN06_0122 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D PMCN06_0458 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PMCN06_1753 atpB; ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PMCN06_1691 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PMCN06_1526 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D PMCN06_1577 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PMCN06_1593 torD; twin-argninine leader-binding protein DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D PMCN06_0288 ppiB1; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PMCN06_0289 ppiB2; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PMCN06_1344 cusC; cation efflux system protein CusC K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PMCN06_2017 Peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D PMCN06_1473 fkpA; peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PMCN06_1829 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PMCN06_2254 surA; chaperone/peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PMCN06_0236 trxM; thioredoxin-1 K03671 TXN; thioredoxin
D PMCN06_2152 trx; protein Trx K03671 TXN; thioredoxin
D PMCN06_0604 hypothetical protein K05838 ybbN; putative thioredoxin
D PMCN06_0900 grxA; glutaredoxin K03674 grxA; glutaredoxin 1
D PMCN06_0544 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D PMCN06_0852 glutaredoxin 4 K07390 grxD; monothiol glutaredoxin
D PMCN06_1570 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMCN06_1107 thioredoxin fold protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D PMCN06_1263 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D PMCN06_1109 dsbC; Thiol:disulfide interchange protein dsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMCN06_1075 dsbD1; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D PMCN06_1282 dsbE; putative thiol:disulfide interchange protein dsbE-2 K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D PMCN06_1299 ccmG; cytochrome c-type biogenesis/thiol:disulfide interchange protein CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pmv04131]
D PMCN06_0201 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PMCN06_0310 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMCN06_1772 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PMCN06_0683 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMCN06_0206 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pmv04121]
C 03051 Proteasome [BR:pmv03051]
D PMCN06_0206 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pmv03032]
D PMCN06_1196 rnh; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PMCN06_2039 himA; DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D PMCN06_0658 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PMCN06_0870 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PMCN06_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PMCN06_2073 putative replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMCN06_0431 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PMCN06_2223 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PMCN06_2057 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0051 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1372 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1387 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1277 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMCN06_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMCN06_0894 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMCN06_2247 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMCN06_2184 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMCN06_1197 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMCN06_0383 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMCN06_0272 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMCN06_1325 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PMCN06_0163 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMCN06_2141 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMCN06_2114 dam; putative adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_2241 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_0375 seqA; replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication
D PMCN06_1293 chromosomal replication control, initiator (DnaA)/regulator (Hda) K10763 hda; DnaA-homolog protein
D PMCN06_0915 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMCN06_1741 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMCN06_0388 gyrA; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMCN06_0389 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMCN06_0645 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMCN06_1092 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pmv03036]
D PMCN06_1246 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PMCN06_0950 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D PMCN06_2039 himA; DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D PMCN06_0658 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PMCN06_0870 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PMCN06_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PMCN06_0678 gmhA; phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D PMCN06_0888 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D PMCN06_0142 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMCN06_0983 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D PMCN06_1039 lrp; leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PMCN06_1486 ndpA; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D PMCN06_0639 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB
D PMCN06_0638 kicA; condesin subunit E K03804 mukE; chromosome partition protein MukE
D PMCN06_0637 kicB; condesin subunit F K03633 mukF; chromosome partition protein MukF
D PMCN06_1156 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PMCN06_1872 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D PMCN06_1787 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PMCN06_1166 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PMCN06_1038 ftsK; FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PMCN06_1167 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PMCN06_0028 hypothetical protein K03591 ftsN; cell division protein FtsN
D PMCN06_1157 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PMCN06_1161 ftsW; replicative DNA helicase DnaB K03588 ftsW; cell division protein FtsW
D PMCN06_1788 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PMCN06_1155 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMCN06_2163 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D PMCN06_2124 zapA; Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D PMCN06_1748 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D PMCN06_0980 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PMCN06_0030 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PMCN06_0463 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D PMCN06_0007 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
D PMCN06_0375 seqA; replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication
D PMCN06_1367 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PMCN06_1366 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PMCN06_1365 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PMCN06_1446 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PMCN06_0388 gyrA; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMCN06_0389 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMCN06_1750 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PMCN06_1751 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PMCN06_2157 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PMCN06_1211 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PMCN06_0324 putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMCN06_1777 ysxC; ribose biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pmv03400]
D PMCN06_0160 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PMCN06_1242 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PMCN06_1986 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PMCN06_0400 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PMCN06_2245 mutT; mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PMCN06_0008 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PMCN06_1866 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PMCN06_0017 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PMCN06_0753 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PMCN06_1108 recJ; recombination protein J K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PMCN06_2141 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PMCN06_0163 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PMCN06_1371 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PMCN06_0449 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PMCN06_0934 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PMCN06_0430 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PMCN06_2034 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PMCN06_2035 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PMCN06_1647 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PMCN06_0313 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PMCN06_0188 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PMCN06_1541 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D PMCN06_0981 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D PMCN06_0161 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D PMCN06_0641 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D PMCN06_1133 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PMCN06_0561 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PMCN06_1277 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PMCN06_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PMCN06_0894 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D PMCN06_2247 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PMCN06_2184 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PMCN06_1197 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PMCN06_0383 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PMCN06_0272 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D PMCN06_2057 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0051 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1372 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1387 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_2114 dam; putative adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_2241 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_0542 recB; exodeoxyribonuclease V beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PMCN06_0270 recC; exodeoxyribonuclease V gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PMCN06_0543 recD; exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PMCN06_1554 recA; recombinase A K03553 recA; recombination protein RecA
D PMCN06_0253 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D PMCN06_0254 ruvB; Holliday junction DNA helicase B K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PMCN06_0252 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PMCN06_0027 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PMCN06_2284 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D PMCN06_0240 hypothetical protein K04067 priC; primosomal replication protein N''
D PMCN06_1041 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PMCN06_0003 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D PMCN06_0315 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PMCN06_1505 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D PMCN06_1093 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PMCN06_0352 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PMCN06_1208 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D PMCN06_2056 rdgC; recombination-associated protein rdgC K03554 rdgC; recombination associated protein RdgC
D PMCN06_0047 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D PMCN06_0331 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PMCN06_1694 yjgR; protein YjgR K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PMCN06_0915 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PMCN06_1741 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PMCN06_0645 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PMCN06_2039 himA; DNA-binding protein HU K05787 hupA; DNA-binding protein HU-alpha
D PMCN06_2059 phage recombinase K07455 recT; recombination protein RecT
D PMCN06_1390 phage recombinase K07455 recT; recombination protein RecT
D PMCN06_0142 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D PMCN06_0658 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D PMCN06_0870 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PMCN06_1686 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PMCN06_0950 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D PMCN06_0488 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PMCN06_2282 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PMCN06_1555 recX; Regulatory protein recX K03565 recX; regulatory protein
D PMCN06_0169 pcrA; ATP-dependent helicase PcrA K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D PMCN06_0769 Dnt K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PMCN06_0778 nrdA; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PMCN06_0781 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pmv03029]
D PMCN06_0823 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PMCN06_0631 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PMCN06_1338 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PMCN06_2025 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D PMCN06_1607 tufA2; elongation factor Tu-A-2 K02358 tuf; elongation factor Tu
D PMCN06_2024 fusA; elongation factor G K02355 fusA; elongation factor G
D PMCN06_1247 era; GTP-binding protein Era K03595 era; GTPase
D PMCN06_0819 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PMCN06_2249 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PMCN06_0247 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PMCN06_0581 rarS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PMCN06_2057 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_0051 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1372 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1387 ssb2; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PMCN06_1331 iron-regulated outer membrane K07277 SAM50; outer membrane protein insertion porin family
D PMCN06_0798 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PMCN06_0354 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D PMCN06_0121 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMCN06_0122 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D PMCN06_0803 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PMCN06_0338 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PMCN06_0341 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D PMCN06_0852 glutaredoxin 4 K07390 grxD; monothiol glutaredoxin
D PMCN06_0324 putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PMCN06_2298 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMCN06_0206 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pmv02000]
D PMCN06_0938 msbA; lipid transporter ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PMCN06_1968 acyl-phosphate glycerol 3-phosphate acyltransferase K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D PMCN06_0601 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PMCN06_0602 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PMCN06_1738 ABC superfamily ATP binding cassette transporter, ABC/permease protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PMCN06_1739 CydD K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PMCN06_0234 ABC-type antimicrobial peptide transport system, permease component K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D PMCN06_1269 yddA; ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PMCN06_0156 yddA; ABC superfamily ATP binding cassette transporter, membrane protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D PMCN06_0955 uup; ABC transporter ATPase component K15738 uup; ABC transport system ATP-binding/permease protein
D PMCN06_0016 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMCN06_0120 modA; molybdate transport system substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMCN06_0807 modA; molybdate ABC superfamily ATP binding cassette transporter, binding protein K02020 modA; molybdate transport system substrate-binding protein
D PMCN06_0119 modB; molybdate transport system permease protein K02018 modB; molybdate transport system permease protein
D PMCN06_0806 modB; molybdate ABC transporter permease protein K02018 modB; molybdate transport system permease protein
D PMCN06_0805 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMCN06_0118 afuC; iron(III) transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D PMCN06_0968 modF; putative molybdenum transport ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D PMCN06_0276 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_0279 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_1257 afuA; periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_1721 afuA; extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_1097 iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D PMCN06_0275 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D PMCN06_1258 afuB; iron-uptake permease inner membrane protein K02011 afuB; iron(III) transport system permease protein
D PMCN06_1719 afuB2; Fe(3+) ions transport system permease protein AfuB-2 K02011 afuB; iron(III) transport system permease protein
D PMCN06_1259 afuC; iron(III) ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_1720 fbpC2; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_0274 afuC; ferric transporter ATP-binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_1718 potA; ABC-type spermidine/putrescine transport system K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PMCN06_0395 tbpA; thiamine transport system substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D PMCN06_0396 thiP; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D PMCN06_0397 thiQ; thiamine transport system ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D PMCN06_1032 potD1; spermidine/putrescine-binding periplasmic protein PotD1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMCN06_1033 potD2; spermidine/putrescine-binding periplasmic protein PotD2 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMCN06_1641 potD3; spermidine/putrescine-binding periplasmic protein PotD3 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PMCN06_1031 potC; spermidine/putrescine ABC transporter membrane protein K11070 potC; spermidine/putrescine transport system permease protein
D PMCN06_1030 potB; spermidine/putrescine ABC transporter membrane protein K11071 potB; spermidine/putrescine transport system permease protein
D PMCN06_1029 potA; putrescine/spermidine ABC transporter ATPase protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PMCN06_1897 putative ABC transporter solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PMCN06_1898 binding-protein-dependent transport systems inner membrane component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PMCN06_1899 potB; PotB protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PMCN06_1900 potA; MalK protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PMCN06_1928 thiY; ABC superfamily ATP binding cassette transporter, binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D PMCN06_1930 thiX; ABC superfamily ATP binding cassette transporter, membrane protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D PMCN06_1931 thiZ; ABC superfamily ATP binding cassette transporter, ABC protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D PMCN06_0191 mglB; methyl-galactoside transport system substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D PMCN06_0189 mglC; beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D PMCN06_0190 mglA; galactose/methyl galaxtoside transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D PMCN06_1625 xylF; D-xylose-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D PMCN06_1627 xylH; xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D PMCN06_1626 xylG; xylose import ATP-binding protein XylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D PMCN06_1913 ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1634 rbsB; ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1149 rbsB; D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1992 rbsB; ribose ABC superfamily ATP binding cassette transporter, binding protein K10439 rbsB; ribose transport system substrate-binding protein
D PMCN06_1148 rbsC; ribose ABC transporter permease protein K10440 rbsC; ribose transport system permease protein
D PMCN06_1994 rbsC; RbsC K10440 rbsC; ribose transport system permease protein
D PMCN06_1914 rbsC; ribose ABC superfamily ATP binding cassette transporter K10440 rbsC; ribose transport system permease protein
D PMCN06_1635 rbsC; ribose ABC superfamily ATP binding cassette transporter, permease protein K10440 rbsC; ribose transport system permease protein
D PMCN06_1915 mglA; ribose ABC superfamily ATP binding cassette transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1147 rbsA; D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1993 rbsA; galactoside ABC superfamily ATP binding cassette transporter, ABC protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1636 rbsA; ribose ABC superfamily ATP binding cassette transporter, ABC protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PMCN06_1942 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D PMCN06_1940 lsrC; autoinducer 2 import system permease protein lsrC K10556 lsrC; AI-2 transport system permease protein
D PMCN06_1941 lsrD; autoinducer 2 import system permease protein lsrD K10557 lsrD; AI-2 transport system permease protein
D PMCN06_1939 lsrA; autoinducer 2 import ATP-binding protein lsrA K10558 lsrA; AI-2 transport system ATP-binding protein
D PMCN06_1125 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PMCN06_1126 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PMCN06_1127 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, ABC protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PMCN06_1124 toluene tolerance efflux ABC superfamily ATP binding cassette transporter, binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D PMCN06_1123 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D PMCN06_0456 pstS; Phosphate-binding protein pstS K02040 pstS; phosphate transport system substrate-binding protein
D PMCN06_0455 pstC; phosphate ABC superfamily ATP binding cassette transporter, permease protein K02037 pstC; phosphate transport system permease protein
D PMCN06_0454 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein
D PMCN06_0453 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PMCN06_1179 artI; arginine ABC superfamily ATP binding cassette transporter, binding protein K09997 artI; arginine transport system substrate-binding protein
D PMCN06_1177 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein
D PMCN06_1178 artQ; arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein
D PMCN06_1180 artP; arginine transporter ATP-binding subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D PMCN06_2042 metQ; D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D PMCN06_2043 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D PMCN06_2044 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D PMCN06_1461 oppA; oligopeptide ABC superfamily ATP binding cassette transporter, binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PMCN06_1462 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein
D PMCN06_1463 oppC; oligopeptide ABC superfamily ATP binding cassette transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D PMCN06_1464 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D PMCN06_1465 oppF; GTPase EngB K10823 oppF; oligopeptide transport system ATP-binding protein
D PMCN06_1057 dppA; dipeptide ABC superfamily ATP binding cassette transporter, binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D PMCN06_0622 dppA; Heme-binding protein A K12368 dppA; dipeptide transport system substrate-binding protein
D PMCN06_1056 dppB; dipeptide ABC superfamily ATP binding cassette transporter, permease protein K12369 dppB; dipeptide transport system permease protein
D PMCN06_1055 dppC; dipeptide ABC superfamily ATP binding cassette transporter, membrane protein K12370 dppC; dipeptide transport system permease protein
D PMCN06_1054 dppD; dipeptide transporter ATP-binding subunit K12371 dppD; dipeptide transport system ATP-binding protein
D PMCN06_1053 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein
D PMCN06_0989 sapA; peptide ABC superfamily ATP binding cassette transporter, binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D PMCN06_0990 sapB; ABC-type antimicrobial peptide transport system K19227 sapB; cationic peptide transport system permease protein
D PMCN06_0991 sapC; ABC-type antimicrobial peptide transport system K19228 sapC; cationic peptide transport system permease protein
D PMCN06_0992 sapD; ABC-type antimicrobial peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D PMCN06_0993 sapF; ABC-type antimicrobial peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D PMCN06_0740 oligopeptide ABC superfamily ATP binding cassette transporter, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PMCN06_1172 fecB; iron-dicitrate transporter substrate-binding subunit K23181 fecB; ferric citrate transport system substrate-binding protein
D PMCN06_1174 fepD; iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein
D PMCN06_1173 fepD; iron-dicitrate transporter permease subunit K23183 fecC; ferric citrate transport system permease protein
D PMCN06_1175 fepC; iron-dicitrate transporter ATP-binding subunit K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D PMCN06_0013 iron complex transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMCN06_0150 hmuT; hemin-binding periplasmic protein HmuT K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMCN06_1974 iron ABC transporter solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PMCN06_0014 fepD; iron complex transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PMCN06_0149 hmuU; hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D PMCN06_1975 fepD; HemU K02015 ABC.FEV.P; iron complex transport system permease protein
D PMCN06_1976 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMCN06_0015 iron complex transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMCN06_0148 hmuV; hemin import ATP-binding protein HmuV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PMCN06_0307 znuA; high-affinity zinc transporter periplasmic component K09815 znuA; zinc transport system substrate-binding protein
D PMCN06_1052 znuB; zinc ABC superfamily ATP binding cassette transporter, membrane protein K09816 znuB; zinc transport system permease protein
D PMCN06_1051 znuC; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PMCN06_0419 sitA; manganese/iron transport system substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D PMCN06_0417 sitC; manganese/iron transport system permease protein K11605 sitC; manganese/iron transport system permease protein
D PMCN06_0416 sitD; manganese/iron transport system permease protein K11606 sitD; manganese/iron transport system permease protein
D PMCN06_0418 sitB; manganese/iron transport system ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D PMCN06_0850 hexB; HexB K09688 kpsM; capsular polysaccharide transport system permease protein
D PMCN06_0849 hexC; HexC,Capsule polysaccharide export protein K10107 kpsE; capsular polysaccharide transport system permease protein
D PMCN06_0851 hexA; ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D PMCN06_1104 lptF; inner membrane protein YjgP K07091 lptF; lipopolysaccharide export system permease protein
D PMCN06_1103 lptG; YjgP/YjgQ family membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D PMCN06_1130 lptB; lipopolysaccharide ABC superfamily ATP binding cassette transporter, ABC protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PMCN06_0590 lolC; lipoprotein ABC superfamily ATP binding cassette transporter, membrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PMCN06_0592 lolC; outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D PMCN06_0591 lolD; lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PMCN06_1302 ccmD; heme exporter protein D K02196 ccmD; heme exporter protein D
D PMCN06_1303 ccmC; heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D PMCN06_1304 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D PMCN06_1305 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D PMCN06_1788 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PMCN06_1787 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PMCN06_1342 yhhJ; inner membrane transport permease YhhJ K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMCN06_0492 yadH; ABC transporter integral membrane protein, transmembrane domain (TMD) K01992 ABC-2.P; ABC-2 type transport system permease protein
D PMCN06_0491 yagD; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PMCN06_0469 ABC superfamily ATP binding cassette transporter, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PMCN06_0470 ABC superfamily ATP binding cassette transporter, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PMCN06_1547 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PMCN06_0468 salX; lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PMCN06_1548 atte; ABC transporter-like protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PMCN06_1849 sdcS; sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PMCN06_2296 divalent anion:Na+ symporter family transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PMCN06_0681 multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump
D PMCN06_1210 hcaT; 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PMCN06_2009 uhpT; sugar phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D PMCN06_1702 glpT; sn-glycerol-3-phosphate dehydrogenase subunit A K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PMCN06_2006 uhpC; regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PMCN06_1008 beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PMCN06_1306 bcr1; bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PMCN06_1800 bcr2; bicyclomycin resistance protein-2 K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PMCN06_0283 sotB; sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D PMCN06_0975 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PMCN06_0976 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PMCN06_1574 fruB; bifunctional fructose-specific PTS IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D PMCN06_0974 crr; glucose-specific PTS system component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PMCN06_1599 ptsG; PTS system, IIBC components K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PMCN06_0954 nagE; PTS family N-acetylglucosamine porter, IICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PMCN06_1525 scrA; PTS system mannose/fructose family transporter subunit IIB K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PMCN06_1839 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D PMCN06_0167 mtlA; PTS system, mannitol-specific IIC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PMCN06_1354 srlB; glucitol/sorbitol-specific PTS system component IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PMCN06_1353 srlE; PTS family glucitol/sorbitol porter component IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D PMCN06_1352 srlA; PTS system enzyme II sorbitol-specific factor K02783 srlA; glucitol/sorbitol PTS system EIIC component
D PMCN06_0908 manX; PTS family mannose porter, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PMCN06_0907 manY; PTS family mannose porter, IIC component K02795 manY; mannose PTS system EIIC component
D PMCN06_0906 manZ; mannose-specific PTS system protein IID K02796 manZ; mannose PTS system EIID component
D PMCN06_0829 ulaC; ascorbate-specific phosphotransferase enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D PMCN06_0828 ulaA; ascorbate-specific PTS system enzyme IIC/IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D PMCN06_1131 ptsN; PTS family porter K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PMCN06_1704 glpF; Glycerol uptake facilitator-related permease K02440 glpF; glycerol uptake facilitator
D PMCN06_1813 gst; glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D PMCN06_0548 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D PMCN06_0421 yccA; inner membrane protein YccA K19416 yccA; modulator of FtsH protease
D PMCN06_1233 formate transporter K06212 focA; formate transporter
D PMCN06_1826 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PMCN06_0377 MscS family small conductance mechanosensitive potassium channel K05802 mscK; potassium-dependent mechanosensitive channel
D PMCN06_2277 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D PMCN06_2276 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PMCN06_0261 tolQ; TolQ colicin import protein K03562 tolQ; biopolymer transport protein TolQ
D PMCN06_0262 tolR; colicin uptake protein TolR K03560 tolR; biopolymer transport protein TolR
D PMCN06_1982 corA; magnesium/nickel/cobalt transporter CorA K03284 corA; magnesium transporter
D PMCN06_2250 merP; copper chaperone K08364 merP; periplasmic mercuric ion binding protein
D PMCN06_2181 cystathionine-beta-synthase CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMCN06_2278 corB; HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMCN06_0856 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PMCN06_0159 fadL; outer membrane protein K06076 fadL; long-chain fatty acid transport protein
D PMCN06_2140 ydeU; protein YdeU K12678 aidA-I; autotransporter family porin
D PMCN06_1231 est; Est protein K12686 apeE; outer membrane lipase/esterase
D PMCN06_0322 hgbA; hemoglobin-binding protein A K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMCN06_1888 hasR; heme acquisition system receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMCN06_0356 hgbA; hemoglobin-binding protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMCN06_0606 tdhA; TonB-dependent heme receptor A K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMCN06_0804 TonB-dependent hemoglobin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D PMCN06_1966 TonB-dependent receptor, beta-barrel domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMCN06_1687 iron-regulated outer membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMCN06_0147 TonB-dependent receptor, beta-barrel domain protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PMCN06_0848 hexD; HexD, capsule biosynthetic locus protein K01991 wza; polysaccharide biosynthesis/export protein
D PMCN06_0214 wza; polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein
D PMCN06_1331 iron-regulated outer membrane K07277 SAM50; outer membrane protein insertion porin family
D PMCN06_0178 NlpB/DapX family lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D PMCN06_2126 comL; DNA uptake lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D PMCN06_1485 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D PMCN06_1562 bacterial surface antigen protein K07278 tamA; translocation and assembly module TamA
D PMCN06_1563 hypothetical protein K09800 tamB; translocation and assembly module TamB
D PMCN06_1833 hsf2; autotransporter adhesin K21449 ata; trimeric autotransporter adhesin
D PMCN06_0774 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PMCN06_0773 hsf; Hsf K21449 ata; trimeric autotransporter adhesin
D PMCN06_1129 lptA; lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D PMCN06_1128 lptC; lipopolysaccharide export system protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D PMCN06_1865 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D PMCN06_2248 rlpB; LPS-assembly lipoprotein RlpB K03643 lptE; LPS-assembly lipoprotein
D PMCN06_0196 corC; magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D PMCN06_0958 hypothetical protein K06518 cidA; holin-like protein
D PMCN06_0876 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D PMCN06_1139 ydgI; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PMCN06_2005 czcD; cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PMCN06_1239 fieF; cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D PMCN06_0032 acrB; RND superfamily resistance-nodulation-cell division acriflavin/drug:proton (H+) antiporter K18138 acrB; multidrug efflux pump
D PMCN06_1946 DMT superfamily drug/metabolite transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D PMCN06_1481 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PMCN06_0241 gluconate:H+ symporter family transporter K07084 yuiF; putative amino acid transporter
D PMCN06_0863 gntT; H+/gluconate symporter-related permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PMCN06_2031 gntP; gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PMCN06_1609 permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PMCN06_1693 dcuB2; anaerobic C4-dicarboxylate transporter DcuB-2 K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PMCN06_1453 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PMCN06_1519 lctP; LctP K03303 lutP; lactate permease
D PMCN06_1581 betaine/carnitine/choline transporter family transporter K02168 betT; choline/glycine/proline betaine transport protein
D PMCN06_1852 tehA; tellurite resistance protein TehA K03304 tehA; tellurite resistance protein
D PMCN06_0448 yrbG; CaCA family calcium (Ca2+):cation antiporter K07301 yrbG; cation:H+ antiporter
D PMCN06_0139 panF; sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter
D PMCN06_0360 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D PMCN06_0618 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D PMCN06_0969 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D PMCN06_2174 nhaA; Na(+)/H(+) antiporter nhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D PMCN06_1261 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D PMCN06_1624 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D PMCN06_0948 Na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D PMCN06_0384 CPA1 family monovalent cation:proton (H+) antiporter NhaP K03316 nhaP; Na+:H+ antiporter
D PMCN06_1763 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PMCN06_1825 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PMCN06_0594 codB; Purine-cytosine permease-related protein K10974 codB; cytosine permease
D PMCN06_1292 uraA; uracil permease K02824 uraA; uracil permease
D PMCN06_0540 NCS2 family nucleobase:cation symporter-2 K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMCN06_1006 inner membrane protein YjcD K06901 pbuG; adenine/guanine/hypoxanthine permease
D PMCN06_0879 tyrP; aromatic amino acid transporter K03834 tyrP; tyrosine-specific transport protein
D PMCN06_0794 tyrP; aromatic amino acid transporter K03834 tyrP; tyrosine-specific transport protein
D PMCN06_1677 tnaB; tryptophan permease K03835 mtr; tryptophan-specific transport protein
D PMCN06_2271 sdaC; Amino acid permease K03835 mtr; tryptophan-specific transport protein
D PMCN06_1274 sdaC; serine transporter K03837 sdaC; serine transporter
D PMCN06_1675 chloride channel family chloride transporter K03281 clcA; chloride channel protein, CIC family
D PMCN06_0284 ychM; putative sulfate transporter YchM K03321 TC.SULP; sulfate permease, SulP family
D PMCN06_1017 dctP; putative C4 dicarboxylate binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D PMCN06_1018 dctQ; Tripartite ATP-independent periplasmic transporters, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D PMCN06_1019 putative C4-dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D PMCN06_1917 dctQ; TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein K21393 yiaN; TRAP-type transport system large permease protein
D PMCN06_1918 tripartite ATP-independent periplasmic transporter DctQ K21394 yiaM; TRAP-type transport system small permease protein
D PMCN06_2207 tripartite ATP-independent periplasmic transporter, DctQ component K21394 yiaM; TRAP-type transport system small permease protein
D PMCN06_1916 dctP; TRAP-T family tripartite ATP-independent periplasmic transporter, binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D PMCN06_2148 siaP; sialic acid-binding periplasmic protein SiaP K21395 yiaO; TRAP-type transport system periplasmic protein
D PMCN06_1963 putative C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMCN06_0300 dcuC; anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMCN06_1066 dcuC; C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PMCN06_2198 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D PMCN06_0771 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D PMCN06_0612 hypothetical protein K24180 mleP; malate permease and related proteins
D PMCN06_1884 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PMCN06_0789 threonine efflux protein K05835 rhtC; threonine efflux protein
D PMCN06_0442 AzlC protein K26605 azlC; branched chain amino acid efflux pump
D PMCN06_0443 azlD; branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D PMCN06_2177 Tripartite tricarboxylate transporter TctA family K07793 tctA; putative tricarboxylic transport membrane protein
D PMCN06_2178 putative membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D PMCN06_2179 Tripartite tricarboxylate transporter family receptor K07795 tctC; putative tricarboxylic transport membrane protein
D PMCN06_0033 perM; PerM family permease K03548 perM; putative permease
D PMCN06_1482 inner membrane protein YhhQ K09125 yhhQ; queuosine precursor transporter
D PMCN06_1845 membrane protein MarC K05595 marC; multiple antibiotic resistance protein
D PMCN06_1266 yhcE; membrane protein YhcE K05595 marC; multiple antibiotic resistance protein
D PMCN06_1161 ftsW; replicative DNA helicase DnaB K03588 ftsW; cell division protein FtsW
D PMCN06_0473 ywbL; high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter
D PMCN06_0472 tpd; Fe(2+) transport protein K07230 p19; periplasmic iron binding protein
D PMCN06_0447 Ni2+-Co2+ transporter family transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D PMCN06_2275 tonB; outer membrane receptor-mediated transport energizer protein TonB K03832 tonB; periplasmic protein TonB
D PMCN06_0265 pal; outer membrane protein P6 K03640 pal; peptidoglycan-associated lipoprotein
D PMCN06_0263 tolA; Membrane protein involved in colicin uptake K03646 tolA; colicin import membrane protein
D PMCN06_0264 tolB; translocation protein TolB K03641 tolB; TolB protein
D PMCN06_1681 oadB; oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PMCN06_1680 oadA; oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D PMCN06_1679 oadG; oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D PMCN06_2151 dsbD2; thiol:disulfide interchange protein DsbD-2 K06196 ccdA; cytochrome c-type biogenesis protein
D PMCN06_1595 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D PMCN06_1594 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D PMCN06_1578 torA; Trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMCN06_1579 torC; cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D PMCN06_1577 torD; chaperone protein TorD K03533 torD; TorA specific chaperone
D PMCN06_0563 torY; cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D PMCN06_0562 torZ; trimethylamine-N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D PMCN06_0783 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D PMCN06_0785 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D PMCN06_0784 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D PMCN06_0030 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PMCN06_0233 acrA; Membrane-fusion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D PMCN06_0212 wzs; Wzs K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PMCN06_1532 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D PMCN06_0309 entericidin EcnAB K16348 ecnB; entericidin B
D PMCN06_1300 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D PMCN06_1598 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PMCN06_0232 outer membrane protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:pmv02044]
D PMCN06_1316 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PMCN06_0927 rcpA; type II/IV secretion system secretin RcpA/CpaC K02280 cpaC; pilus assembly protein CpaC
D PMCN06_0926 rcpB; RcpB protein K12509 rcpB; pilus assembly protein RcpB
D PMCN06_0925 flp operon protein D K02282 cpaE; pilus assembly protein CpaE
D PMCN06_0924 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PMCN06_0923 tadB; Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PMCN06_0922 tadC; Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PMCN06_0919 tadE; TadE K12513 tadE; tight adherence protein E
D PMCN06_0918 tadF; Flp pilus assembly protein TadF K12514 tadF; tight adherence protein F
D PMCN06_0917 tadG; Flp pilus assembly protein TadG K12515 tadG; tight adherence protein G
D PMCN06_0931 flp1; flp operon protein Flp1 K02651 flp; pilus assembly protein Flp/PilA
D PMCN06_0266 type II secretory pathway K02679 ppdA; prepilin peptidase dependent protein A
D PMCN06_0267 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B
D PMCN06_0269 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D PMCN06_1221 ptfA; type 4 fimbriae subunit K02682 ppdD; prepilin peptidase dependent protein D
D PMCN06_1220 holB; type IV pilus assembly protein PilB K02504 hofB; protein transport protein HofB
D PMCN06_1219 hofC; type IV pilus assembly protein K02505 hofC; protein transport protein HofC
D PMCN06_2238 comE; ComE K02507 hofQ; protein transport protein HofQ
D PMCN06_1981 hypothetical protein K02221 yggT; YggT family protein
D PMCN06_2193 ComE operon protein 1 K02237 comEA; competence protein ComEA
D PMCN06_0939 rec2; recombination protein 2 K02238 comEC; competence protein ComEC
D PMCN06_1109 dsbC; Thiol:disulfide interchange protein dsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D PMCN06_2140 ydeU; protein YdeU K12678 aidA-I; autotransporter family porin
D PMCN06_1231 est; Est protein K12686 apeE; outer membrane lipase/esterase
D PMCN06_1549 ppkA; PpkA protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D PMCN06_2244 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PMCN06_1691 secB; preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D PMCN06_1069 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PMCN06_2026 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PMCN06_1070 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PMCN06_1091 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PMCN06_1652 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PMCN06_2280 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PMCN06_1786 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PMCN06_1068 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PMCN06_2298 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PMCN06_2169 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D PMCN06_2168 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PMCN06_2167 tatC; crossover junction endoribonuclease subunit C K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pmv02042]
D PMCN06_2181 cystathionine-beta-synthase CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PMCN06_2278 corB; HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:pmv02022]
D PMCN06_0451 phoR; phosphate regulon sensor histidine kinase protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PMCN06_0452 phoB; phosphate regulon response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D PMCN06_1483 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D PMCN06_1484 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D PMCN06_1082 qseC; sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D PMCN06_1083 qseB; transcriptional regulatory protein QseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D PMCN06_0333 arcB; aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D PMCN06_1078 arcA; two-component response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D PMCN06_1856 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D PMCN06_1561 narP; nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D PMCN06_2007 uhpB; sensory histidine kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D PMCN06_2008 uhpA; transcriptional regulatory protein UhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D PMCN06_1723 pgtB; Phosphoglycerate transport system sensor protein pgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D PMCN06_1724 pgtA; two component Fis family transcriptional regulator K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D PMCN06_0786 dctB; sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D PMCN06_0787 ttrR; tetrathionate reductase regulon response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
C 02035 Bacterial motility proteins [BR:pmv02035]
D PMCN06_1316 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D PMCN06_0931 flp1; flp operon protein Flp1 K02651 flp; pilus assembly protein Flp/PilA
D PMCN06_0927 rcpA; type II/IV secretion system secretin RcpA/CpaC K02280 cpaC; pilus assembly protein CpaC
D PMCN06_0925 flp operon protein D K02282 cpaE; pilus assembly protein CpaE
D PMCN06_0924 cpaF; pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pmv04812]
D PMCN06_1367 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PMCN06_1155 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMCN06_1156 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PMCN06_0463 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
C 04147 Exosome [BR:pmv04147]
D PMCN06_0206 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PMCN06_1501 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PMCN06_0310 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PMCN06_1511 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PMCN06_0683 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PMCN06_0865 tsaA; Peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PMCN06_0121 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PMCN06_0798 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PMCN06_0436 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PMCN06_1912 gnl; gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D PMCN06_0997 guaB; inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PMCN06_2025 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D PMCN06_1607 tufA2; elongation factor Tu-A-2 K02358 tuf; elongation factor Tu
D PMCN06_1234 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PMCN06_0308 fadD; long-chain acyl--CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_0766 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PMCN06_1009 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PMCN06_0382 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PMCN06_0037 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PMCN06_0883 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PMCN06_0303 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PMCN06_0194 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PMCN06_0571 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PMCN06_1705 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PMCN06_2288 glnA; glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PMCN06_2166 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PMCN06_2187 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PMCN06_1074 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PMCN06_0971 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PMCN06_1811 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PMCN06_1978 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_2219 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PMCN06_1772 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pmv02048]
D PMCN06_0331 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D PMCN06_0332 cas3; CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PMCN06_0327 cys1; CRISPR-associated protein, Csy1 family K19127 csy1; CRISPR-associated protein Csy1
D PMCN06_0328 cys2; CRISPR-associated protein, Csy2 family K19128 csy2; CRISPR-associated protein Csy2
D PMCN06_0329 csy3; CRISPR-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3
D PMCN06_0330 csy4; CRISPR-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D PMCN06_1707 type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PMCN06_1709 Type I restriction-modification system specificity determinant K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PMCN06_1711 putative type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PMCN06_2114 dam; putative adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_2241 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PMCN06_1603 type III restriction-modification system EcoPI enzyme res K01156 res; type III restriction enzyme [EC:3.1.21.5]
D PMCN06_1602 type III restriction-modification system EcoP15I K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PMCN06_1419 RelE-RelB toxin-antitoxin system and transcriptional repressor K06218 relE; mRNA interferase RelE/StbE
D PMCN06_1780 putative plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D PMCN06_1781 vapI; addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D PMCN06_1155 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PMCN06_1367 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PMCN06_0388 gyrA; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PMCN06_0389 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PMCN06_0042 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PMCN06_1582 TPR repeat protein K09159 cptB; antitoxin CptB
D PMCN06_0338 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pmv04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:pmv04052]
D PMCN06_0231 namPT; nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pmv01504]
D PMCN06_p02 strA; streptomycin resistance K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D PMCN06_0948 Na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D PMCN06_2266 vatB; transferase hexapeptide repeat containing protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D PMCN06_p03 sulII; dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D PMCN06_0030 RND transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PMCN06_0032 acrB; RND superfamily resistance-nodulation-cell division acriflavin/drug:proton (H+) antiporter K18138 acrB; multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:pmv00536]
D PMCN06_0510 hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pmv03100]
D PMCN06_t18 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t34 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t53 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t05 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PMCN06_t22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t07 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t08 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t40 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PMCN06_t21 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMCN06_t51 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PMCN06_t37 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMCN06_t38 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMCN06_t54 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PMCN06_t10 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PMCN06_t27 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PMCN06_t25 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMCN06_t48 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMCN06_t49 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PMCN06_t46 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t33 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PMCN06_t23 tRNA-His K14226 tRNA-His; tRNA His
D PMCN06_t17 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMCN06_t35 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMCN06_t52 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PMCN06_t28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t36 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PMCN06_t13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMCN06_t14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PMCN06_t29 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t16 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t30 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t56 tRNA-Met K14230 tRNA-Met; tRNA Met
D PMCN06_t50 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PMCN06_t24 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMCN06_t39 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PMCN06_t12 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t15 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t06 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PMCN06_t44 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMCN06_t47 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PMCN06_t55 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PMCN06_t45 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PMCN06_t26 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t01 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t02 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t04 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t03 tRNA-Val K14237 tRNA-Val; tRNA Val
D PMCN06_t43 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D PMCN06_r09 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PMCN06_r02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r11 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r17 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r08 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r14 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PMCN06_r03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r15 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r12 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r18 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r06 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PMCN06_r19 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PMCN06_1610 NAD-dependent epimerase/dehydratase family protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D PMCN06_1616 3-hydroxyisobutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D PMCN06_0635 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PMCN06_0311 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PMCN06_0567 yedY; putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D PMCN06_0294 yhjA; cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D PMCN06_0176 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMCN06_0891 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PMCN06_0475 dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PMCN06_2173 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PMCN06_0726 ftnA; nonheme iron-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PMCN06_0727 ftnA; nonheme iron-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D PMCN06_0034 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D PMCN06_0292 nrdG; anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PMCN06_1230 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PMCN06_0714 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D PMCN06_0172 wbbJ; galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PMCN06_0197 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PMCN06_0117 modD; molybdenum transport protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D PMCN06_1226 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PMCN06_2002 apbE; thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PMCN06_1615 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D PMCN06_0394 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PMCN06_0260 fcbC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PMCN06_2077 calcineurin phosphoesterase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D PMCN06_0646 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PMCN06_0461 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PMCN06_0290 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMCN06_2183 tatD; TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PMCN06_0959 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D PMCN06_0374 ybfF; esterase YbfF K01175 ybfF; esterase [EC:3.1.-.-]
D PMCN06_0082 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMCN06_2084 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMCN06_1416 lysozyme, possible phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PMCN06_1821 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PMCN06_1706 ASCH family protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D PMCN06_1731 tdcF; endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PMCN06_1042 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D PMCN06_1614 putative aldolase class 2 protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D PMCN06_0960 csdB; cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D PMCN06_2150 nanM; N-acetylneuraminate epimerase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D PMCN06_1613 gip; xylose isomerase, TIM barrel domain protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D PMCN06_0304 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PMCN06_0403 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PMCN06_0404 rnfC; electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PMCN06_0405 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PMCN06_1995 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PMCN06_1996 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PMCN06_1997 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PMCN06_1998 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PMCN06_1999 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PMCN06_2000 nqr6; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D PMCN06_0818 sfsA; sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A
D PMCN06_1518 ykgE; protein YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PMCN06_1517 ykgF; electron transport protein YkgF K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PMCN06_1516 ykgG; protein YkgG K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PMCN06_0429 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D PMCN06_0343 fdx; Ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PMCN06_0782 iron-sulfur cluster-binding protein K11107 yfaE; ferredoxin
D PMCN06_0402 rnfG; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PMCN06_0401 rnfE; SoxR-reducing system protein RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PMCN06_0406 rnfA; Na(+)-translocating NADH-quinone reductase subunit E K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PMCN06_1749 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D PMCN06_0339 iscU; NifU-like protein involved in Fe-S cluster formation K04488 iscU; nitrogen fixation protein NifU and related proteins
D PMCN06_0731 hypothetical protein K15536 cybC; soluble cytochrome b562
D PMCN06_1858 napD; periplasmic nitrate reductase maturation protein K02570 napD; periplasmic nitrate reductase NapD
D PMCN06_1857 napF; periplasmic nitrate reductase K02572 napF; ferredoxin-type protein NapF
D PMCN06_1580 hypothetical protein K02571 napE; periplasmic nitrate reductase NapE
D PMCN06_1283 nrfE; cytochrome c-type biogenesis protein K04016 nrfE; cytochrome c-type biogenesis protein NrfE
D PMCN06_1281 ccmH; cytochrome c-type biogenesis protein K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF
D PMCN06_1280 nrfF; formate-dependent nitrite reductase complex NrfF subunit K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG
D PMCN06_0372 fldA; flavodoxin FldA K03839 fldA; flavodoxin I
D PMCN06_1863 napC; cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
D PMCN06_1860 napG; quinol dehydrogenase periplasmic component K02573 napG; ferredoxin-type protein NapG
D PMCN06_1861 napH; quinol dehydrogenase membrane component K02574 napH; ferredoxin-type protein NapH
D PMCN06_1286 nrfB; cytochrome c-type protein NrfB K04013 nrfB; cytochrome c-type protein NrfB
D PMCN06_1285 nrfC; cytochrome c nitrite reductase, Fe-S protein K04014 nrfC; protein NrfC
D PMCN06_1284 nrfD; formate-dependent nitrite reductase membrane protein NrfD K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PMCN06_2164 cysZ; putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D PMCN06_1296 ywkD; protein YwkD K08234 yaeR; glyoxylase I family protein
D PMCN06_1191 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PMCN06_0869 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D PMCN06_0868 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D PMCN06_0019 losA; protein LosA K07270 K07270; glycosyl transferase, family 25
D PMCN06_0021 Beta-1,4 galactosyltransferase K07270 K07270; glycosyl transferase, family 25
D PMCN06_0535 glycosyl transferase, family 25 protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D PMCN06_1556 hemY; porphyrin biosynthesis protein K02498 hemY; HemY protein
D PMCN06_2170 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D PMCN06_2171 yigP; protein YigP K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D PMCN06_1643 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D PMCN06_1587 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D PMCN06_0124 p-Aminobenzoyl-glutamate transporter family (AbgT) K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D PMCN06_1200 sufI; cell division protein SufI K04753 sufI; suppressor of ftsI
C 99999 Others
D PMCN06_1085 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PMCN06_1356 gutM; gutM K02466 gutM; glucitol operon activator protein
D PMCN06_0502 cspD; Cold shock protein K03704 cspA; cold shock protein
D PMCN06_0713 cspC; Cold shock protein K03704 cspA; cold shock protein
D PMCN06_1712 tex; YhgF like protein K06959 tex; protein Tex
C 99974 Translation
D PMCN06_1341 yhiH; ABC transporter ATP-binding protein YhiH K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D PMCN06_1348 tig; trigger factor K03545 tig; trigger factor
D PMCN06_0568 yedZ; putative sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D PMCN06_0424 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D PMCN06_1080 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D PMCN06_1776 comM; competence protein ComM K07391 comM; magnesium chelatase family protein
D PMCN06_1819 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D PMCN06_0010 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PMCN06_1932 rmuC; DNA recombination protein rmuC-like protein K09760 rmuC; DNA recombination protein RmuC
D PMCN06_0487 family proteiny with RecF protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D PMCN06_0677 endonuclease K07460 yraN; putative endonuclease
D PMCN06_1864 smf; protein Smf K04096 smf; DNA processing protein
D PMCN06_0086 phage terminase K06909 xtmB; phage terminase large subunit
D PMCN06_2088 phage terminase large subunit-like protein K06909 xtmB; phage terminase large subunit
D PMCN06_1036 rarA; replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PMCN06_1934 topA; DNA topoisomerase TopA K07479 yrdD; putative DNA topoisomerase
D PMCN06_0053 hypothetical protein K07501 K07501; 3'-5' exonuclease
D PMCN06_0843 IS605/IS200 family transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D PMCN06_1094 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PMCN06_1044 pitA; phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PMCN06_0626 putative symporter YidK K03307 TC.SSS; solute:Na+ symporter, SSS family
D PMCN06_0399 NSS family amino acid:sodium (Na+) symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PMCN06_0779 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PMCN06_1214 alsT; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PMCN06_0556 alsT; AGSC family amino acid:sodium (Na+) symporter AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PMCN06_1498 brnQ; branched-chain amino acid permease K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PMCN06_1957 nupC; CNT family concentrative nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D PMCN06_0157 Putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D PMCN06_0349 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D PMCN06_1773 hypothetical protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D PMCN06_1820 tfoX; DNA transformation protein TfoX K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D PMCN06_1025 proQ; putative solute/DNA competence effector K03607 proQ; ProP effector
D PMCN06_1951 universal stress protein A K06149 uspA; universal stress protein A
D PMCN06_0730 uspE; universal stress protein UspE K14055 uspE; universal stress protein E
D PMCN06_2290 typA; glutathione-disulfide reductase K06207 typA; GTP-binding protein
D PMCN06_0182 phoH; PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PMCN06_1045 hypothetical protein K07184 ygiM; SH3 domain protein
D PMCN06_2201 ahpA; AhpA protein K07186 smp; membrane protein
D PMCN06_2203 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PMCN06_1037 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D PMCN06_1047 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D PMCN06_1767 vacJ; lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA
D PMCN06_0484 hypothetical protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D PMCN06_0584 slyB; surface antigen family protein K06077 slyB; outer membrane lipoprotein SlyB
D PMCN06_1330 skp; outer membrane p25 K06142 hlpA; outer membrane protein
D PMCN06_1880 lppB; outer membrane antigenic lipoprotein B K06194 nlpD; lipoprotein NlpD
D PMCN06_0115 nlpI; Lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D PMCN06_0841 phyB; PhyB,Capsule polysaccharide export protein K07265 kpsS; capsular polysaccharide export protein
D PMCN06_0842 phyA; PhyA,Capsule polysaccharide export protein K07266 kpsC; capsular polysaccharide export protein
D PMCN06_1206 oapA; opacity-associated protein OapA K07268 oapA; opacity associated protein
D PMCN06_0351 ompW; outer membrane protein K07275 ompW; outer membrane protein
D PMCN06_0767 slp; Slp family outer membrane lipoprotein K07285 slp; outer membrane lipoprotein
D PMCN06_1990 lipoprotein K07286 yajG; uncharacterized lipoprotein
D PMCN06_0966 nodulation efficiency, NfeD family protein K07340 ybbJ; inner membrane protein
D PMCN06_1340 yhiI; protein YhiI K01993 ABC-2.TX; HlyD family secretion protein
D PMCN06_1318 PerM family permease K11744 tqsA; AI-2 transport protein TqsA
D PMCN06_1301 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D PMCN06_1298 ccmH; cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PMCN06_1297 ccmI; cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D PMCN06_1315 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D PMCN06_0552 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D PMCN06_1684 cyaY; frataxin, iron-binding and oxidizing protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D PMCN06_0320 heme utilization protein HutX K07227 chuX; heme iron utilization protein
D PMCN06_0541 dsrE; YchN like protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PMCN06_0761 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D PMCN06_1243 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D PMCN06_0478 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D PMCN06_0439 integral membrane protein K07038 K07038; inner membrane protein
D PMCN06_1882 rbn; ribonuclease BN K07058 K07058; membrane protein
D PMCN06_0123 FxsA cytoplasmic membrane family protein K07113 fxsA; UPF0716 protein FxsA
D PMCN06_0961 cysteine desulfurase CsdAE K02426 sufE; cysteine desulfuration protein SufE
D PMCN06_1521 hflD; High frequency lysogenization protein hflD-like protein K07153 hflD; high frequency lysogenization protein
D PMCN06_0855 lemA; LemA protein K03744 lemA; LemA protein
D PMCN06_2016 slyX; SlyX-like protein K03745 slyX; SlyX protein
D PMCN06_0203 sprT; SprT family metallopeptidase K02742 sprT; SprT protein
D PMCN06_0944 sanA; putative membrane protein K03748 sanA; SanA protein
D PMCN06_1026 hypothetical protein K03808 pqiA; paraquat-inducible protein A
D PMCN06_1492 transmembrane protein K08984 yjdF; putative membrane protein
D PMCN06_0987 membrane protein K08990 ycjF; putative membrane protein
D PMCN06_1883 SEC-C domain protein domain-containing protein K09858 K09858; SEC-C motif domain protein
D PMCN06_1144 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D PMCN06_0511 hypothetical protein K06867 K06867; uncharacterized protein
D PMCN06_2180 aslB; Arylsulfatase regulator (Fe-S oxidoreductase) K06871 K06871; uncharacterized protein
D PMCN06_0629 aslB; anaerobic sulfatase-maturating enzyme AslB-1 K06871 K06871; uncharacterized protein
D PMCN06_0853 putative transmembrane protein K06872 K06872; uncharacterized protein
D PMCN06_1611 kmt1; kmt1 protein K06889 K06889; uncharacterized protein
D PMCN06_0988 hypothetical protein K06918 K06918; uncharacterized protein
D PMCN06_0355 sodium:dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D PMCN06_1215 GNAT family acetyltransferase K06975 K06975; uncharacterized protein
D PMCN06_1013 glyoxalase family protein K06996 K06996; uncharacterized protein
D PMCN06_0898 hypothetical protein K07000 K07000; uncharacterized protein
D PMCN06_1488 nucleoid-associated protein NdpA K07014 K07014; uncharacterized protein
D PMCN06_1716 yaaH; inner membrane protein YaaH K07034 K07034; uncharacterized protein
D PMCN06_1350 ypfJ; protein YpfJ K07054 K07054; uncharacterized protein
D PMCN06_0578 short chain dehydrogenase K07071 K07071; uncharacterized protein
D PMCN06_0493 imp; TAXI family TRAP transporter solute receptor K07080 K07080; uncharacterized protein
D PMCN06_1842 imp; periplasmic-binding protein K07080 K07080; uncharacterized protein
D PMCN06_0380 inner membrane protein YfcA K07090 K07090; uncharacterized protein
D PMCN06_0625 hypothetical protein K07090 K07090; uncharacterized protein
D PMCN06_1225 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D PMCN06_1143 transcriptional regulator YtfJ K07109 K07109; uncharacterized protein
D PMCN06_0676 lppC; lipoprotein LppC protein K07121 K07121; uncharacterized protein
D PMCN06_0994 dltE; short chain dehydrogenase/reductase family oxidoreductase K07124 K07124; uncharacterized protein
D PMCN06_0387 hypothetical protein K07126 K07126; uncharacterized protein
D PMCN06_1876 Sel1 domain protein K07126 K07126; uncharacterized protein
D PMCN06_2299 hypothetical protein K08998 K08998; uncharacterized protein
D PMCN06_1980 hypothetical protein K09131 K09131; uncharacterized protein
D PMCN06_1443 hypothetical protein K09158 K09158; uncharacterized protein
D PMCN06_0569 hypothetical protein K09160 K09160; uncharacterized protein
D PMCN06_1766 YfbU domain protein K09161 K09161; uncharacterized protein
D PMCN06_0347 hypothetical protein K09780 K09780; uncharacterized protein
D PMCN06_0741 hypothetical protein K09790 K09790; uncharacterized protein
D PMCN06_0936 tetraacyldisaccharide 4'-kinase K09791 K09791; uncharacterized protein
D PMCN06_1830 hypothetical protein K09794 K09794; uncharacterized protein
D PMCN06_1774 hypothetical protein K09798 K09798; uncharacterized protein
D PMCN06_1135 electron transport complex K09801 K09801; uncharacterized protein
D PMCN06_0910 hypothetical protein K09802 K09802; uncharacterized protein
D PMCN06_0878 membrane protein K09824 virK; uncharacterized protein
D PMCN06_1778 virK; membrane protein K09824 virK; uncharacterized protein
D PMCN06_2003 putative YheO-like protein K05952 K05952; uncharacterized protein
D PMCN06_1241 YaaA like protein K09861 K09861; uncharacterized protein
D PMCN06_1216 zinc-binding protein K09862 K09862; uncharacterized protein
D PMCN06_2038 hypothetical protein K09891 K09891; uncharacterized protein
D PMCN06_1535 Der GTPase activator K09894 K09894; uncharacterized protein
D PMCN06_2123 putative cytoplasmic protein K09895 K09895; uncharacterized protein
D PMCN06_1571 YihD like protein K09896 K09896; uncharacterized protein
D PMCN06_1569 YifE like protein K09897 K09897; uncharacterized protein
D PMCN06_0006 phosphopyruvate hydratase K09898 K09898; uncharacterized protein
D PMCN06_0762 membrane protein K09899 K09899; uncharacterized protein
D PMCN06_0566 hypothetical protein K09901 K09901; uncharacterized protein
D PMCN06_0464 YcgL like protein K09902 K09902; uncharacterized protein
D PMCN06_1487 hypothetical protein K09904 K09904; uncharacterized protein
D PMCN06_0582 hypothetical protein K09907 K09907; uncharacterized protein
D PMCN06_0750 membrane protein K09908 K09908; uncharacterized protein
D PMCN06_0414 hypothetical protein K09909 K09909; uncharacterized protein
D PMCN06_0477 hypothetical protein K09910 K09910; uncharacterized protein
D PMCN06_0503 hypothetical protein K09911 K09911; uncharacterized protein
D PMCN06_0501 hypothetical protein K09917 K09917; uncharacterized protein
D PMCN06_2156 yigA; protein YyigA K09921 K09921; uncharacterized protein
D PMCN06_1983 hypothetical protein K09923 K09923; uncharacterized protein
D PMCN06_1088 hypothetical protein K09929 K09929; uncharacterized protein
D PMCN06_1087 hypothetical protein K09930 K09930; uncharacterized protein
D PMCN06_0545 hypothetical protein K09946 K09946; uncharacterized protein
D PMCN06_0087 hypothetical protein K09961 K09961; uncharacterized protein
D PMCN06_1276 yijF; protein YijF K09974 K09974; uncharacterized protein
D PMCN06_1364 hypothetical protein K09979 K09979; uncharacterized protein
D PMCN06_1043 phosphate transport regulator K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024