+D GENES KO
#
KEGG Orthology (KO) - Candidatus Protochlamydia naegleriophila
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pnl00010]
D PNK_1119 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PNK_1530 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PNK_1235 pfkA; phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PNK_1121 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PNK_0957 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PNK_1936 gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PNK_0255 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PNK_0157 pgma1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_0715 pgma3; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_0128 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PNK_1620 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PNK_2022 ppsA; Putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PNK_0896 pdhA; pyruvate dehydrogenase, E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PNK_0897 pdhB; pyruvate dehydrogenase, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PNK_0898 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PNK_2318 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PNK_0787 adh; Zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PNK_1796 aldA; Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PNK_1863 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_1303 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_0366 pckG; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:pnl00020]
D PNK_0855 gltA; putative type 1 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PNK_1088 acnb3; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PNK_2118 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PNK_0790 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PNK_0791 sucB; 2-oxogluturate dehydrogenase complex E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0568 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PNK_0567 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PNK_2204 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PNK_2203 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PNK_2205 sdhC; putative succinate dehydrogenase cytochrome b-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PNK_1642 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PNK_0854 mdh1; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PNK_0366 pckG; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PNK_0896 pdhA; pyruvate dehydrogenase, E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PNK_0897 pdhB; pyruvate dehydrogenase, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PNK_0898 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:pnl00030]
D PNK_1530 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PNK_0976 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PNK_0974 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PNK_0451 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PNK_1354 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PNK_2060 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PNK_1680 tal3; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PNK_0018 tal1; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PNK_0689 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PNK_2412 xpk1; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D PNK_0739 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PNK_1577 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PNK_0929 Conserved hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PNK_2120 prsA; putative Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PNK_1121 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PNK_1235 pfkA; phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pnl00040]
D PNK_0940 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PNK_1354 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:pnl00051]
D PNK_1235 pfkA; phosphofructokinase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PNK_1121 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PNK_0957 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pnl00052]
D PNK_0560 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PNK_1119 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism [PATH:pnl00053]
D PNK_0940 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PNK_0067 wcaG; NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:pnl00500]
D PNK_1555 bgl; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PNK_2292 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PNK_1580 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PNK_0865 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PNK_2296 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PNK_0135 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D PNK_1376 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PNK_0134 putative glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PNK_1833 isoamylase K01214 ISA; isoamylase [EC:3.2.1.68]
D PNK_0772 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D PNK_1022 hypothetical protein K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D PNK_1835 alpha-amylase-family protein K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D PNK_1119 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PNK_1530 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pnl00520]
D PNK_2182 nagA; putative beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PNK_0556 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PNK_0555 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PNK_0001 glmu1; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PNK_2337 glmu3; bifunctional protein UDP-N-acetylglucosamine pyrophosphorylase, glucosamine-1-phosphate N-acetyltransferase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D PNK_0238 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PNK_1601 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PNK_0397 Polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PNK_1119 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PNK_0940 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PNK_0560 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PNK_0067 wcaG; NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PNK_1530 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PNK_1445 hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D PNK_2292 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pnl00620]
D PNK_1863 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_1303 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_0896 pdhA; pyruvate dehydrogenase, E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PNK_0897 pdhB; pyruvate dehydrogenase, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PNK_0898 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_2318 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PNK_0787 adh; Zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PNK_0377 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PNK_1474 hypothetical protein K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PNK_1620 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PNK_0699 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PNK_1351 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PNK_1350 accC1; Biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PNK_2049 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PNK_0011 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PNK_1796 aldA; Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PNK_1166 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PNK_1105 Metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PNK_2326 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PNK_0854 mdh1; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PNK_1642 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PNK_0366 pckG; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D PNK_2022 ppsA; Putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pnl00630]
D PNK_1863 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_1303 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_0854 mdh1; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PNK_0855 gltA; putative type 1 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PNK_1088 acnb3; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PNK_0585 Conserved hypothetical protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D PNK_0637 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PNK_1921 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PNK_2032 gcvPA; glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PNK_2031 gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PNK_2034 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_2033 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PNK_1420 Conserved hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
C 00640 Propanoate metabolism [PATH:pnl00640]
D PNK_1863 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_1303 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_0377 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PNK_1474 hypothetical protein K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0699 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PNK_1351 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PNK_1350 accC1; Biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PNK_2049 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PNK_0567 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PNK_0568 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:pnl00650]
D PNK_2204 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PNK_2203 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PNK_2205 sdhC; putative succinate dehydrogenase cytochrome b-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PNK_0461 hypothetical protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
C 00660 C5-Branched dibasic acid metabolism
D PNK_0567 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PNK_0568 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:pnl00562]
D PNK_0039 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PNK_1001 impA; putative monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PNK_0957 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pnl00190]
D PNK_1757 nuoA; putative NADH dehydrogenase I, chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PNK_1756 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PNK_1755 nuoC; putative NADH dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PNK_1754 nuoD; NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PNK_1753 nuoE; putative NADH dehydrogenase I, chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PNK_1752 nuoF; NADH-ubiquinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PNK_1751 nuoG; NADH-ubiquinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PNK_1750 nuoH; NADH dehydrogenase I, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PNK_1749 nuoI; NADH dehydrogenase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PNK_1748 nuoJ; putative NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PNK_1747 nuoK; NADH dehydrogenase I, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PNK_1746 nuoL; NADH-ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PNK_1745 nuoM; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PNK_1744 nuoN; putative NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PNK_2160 Pyridine nucleotide-disulphide oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PNK_2204 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PNK_2203 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PNK_2205 sdhC; putative succinate dehydrogenase cytochrome b-558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PNK_0668 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PNK_0669 cyoD; putative cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PNK_0027 fixN; putative cytochrome c oxidase, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PNK_0028 fixO; putative cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PNK_0670 cyoC; Cytochrome o ubiquinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PNK_0671 cyoB; Ubiquinol oxidase subunit 1 K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D PNK_0672 cyoA; cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PNK_1611 cydA; cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PNK_1610 cydB; cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PNK_1651 atpA; F-type ATP synthase, subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PNK_1649 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PNK_1650 atpG; putative F-type ATP synthase, subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PNK_1652 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PNK_1648 atpc1; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PNK_1655 atpB; putative F-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PNK_1653 atpF; putative F-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PNK_1654 atpc3; putative F-type ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PNK_1663 ntpA; V-type ATP synthase, subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D PNK_1662 ntpB; putative V-type ATP synthase, subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D PNK_1661 ntpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D PNK_1665 ntpE; putative V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D PNK_1660 ntpI; V-type ATP synthase, subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D PNK_1659 ntpK; V-type ATP synthase, subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:pnl00680]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PNK_1921 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PNK_0128 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PNK_0854 mdh1; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PNK_1121 fbaB; fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PNK_0377 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PNK_1474 hypothetical protein K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PNK_1863 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_1303 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_2022 ppsA; Putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PNK_0157 pgma1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_0715 pgma3; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_1552 putative phosphoglycerate mutase protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D PNK_1113 comB; 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:pnl00910]
D PNK_0306 gdhB; eucaryotic NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PNK_0637 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PNK_2361 cynt7; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PNK_0823 cynt1; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PNK_1131 cynt3; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PNK_2164 cynt5; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pnl00920]
D PNK_2346 ssuA; Putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PNK_2344 ABC-type transporter, permease subunit K15554 ssuC; sulfonate transport system permease protein
D PNK_2345 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PNK_0230 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D PNK_0514 cysK; cysteine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pnl00061]
D PNK_0699 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PNK_1351 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PNK_1350 accC1; Biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PNK_2049 accD; acetyl-CoA carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PNK_0911 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D PNK_0909 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PNK_0908 fabH; 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PNK_0641 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PNK_1870 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_2381 fabg3; putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0910 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase protein FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0711 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_1970 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PNK_0716 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pnl00071]
D PNK_2040 AMP-binding enzyme family protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PNK_2410 conserved putative membrane protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PNK_2318 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:pnl00100]
D PNK_0661 dhcr7; 7-dehydrocholesterol reductase K00213 DHCR7; 7-dehydrocholesterol reductase [EC:1.3.1.21]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pnl00561]
D PNK_0787 adh; Zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PNK_0540 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PNK_0545 plsX; putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PNK_0452 plsC; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PNK_0465 hypothetical protein K22920 UGP3; UTP---glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00564 Glycerophospholipid metabolism [PATH:pnl00564]
D PNK_0072 gpdA; putative glycerol-3-P dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PNK_0540 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PNK_0452 plsC; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PNK_2364 Conserved hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PNK_2040 AMP-binding enzyme family protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PNK_2410 conserved putative membrane protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D PNK_0454 cdsA; putative phosphatidate cytidylytransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PNK_0582 pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PNK_2328 psdD; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PNK_0261 pgsa1; phosphatidylglycerophosphate synthase (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase) K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PNK_1581 pgsa3; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PNK_2280 cicA; protein involved in cell wall biosynthesis, morphogenesis and cell division K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D PNK_0017 hypothetical protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:pnl01040]
D PNK_0615 putative fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pnl00230]
D PNK_1631 putative nudix hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PNK_1577 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PNK_0929 Conserved hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PNK_2120 prsA; putative Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PNK_1342 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PNK_2240 putative multicopper oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PNK_0414 ndk1; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PNK_0416 ndk3; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PNK_0074 Nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PNK_1299 cytidine/deoxycytidylate deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PNK_2187 cytidine/deoxycytidylate deaminase family protein K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PNK_1389 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PNK_2171 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PNK_2170 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PNK_1901 dgt; putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PNK_1159 HD domain-containing protein K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]
D PNK_1780 Conserved hypothetical membrane protein K01514 PRUNE; exopolyphosphatase [EC:3.6.1.11]
D PNK_2138 ppx; Putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PNK_2076 amn; putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PNK_0644 ade; Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D PNK_1550 adk3; putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PNK_0850 adk1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PNK_1475 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:pnl00240]
D PNK_1014 NAD dependent epimerase/dehydratase family protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PNK_2062 pyrC; putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PNK_2249 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PNK_0414 ndk1; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PNK_0416 ndk3; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PNK_1475 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PNK_0946 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PNK_0979 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PNK_0453 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PNK_1342 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PNK_0300 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PNK_2171 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PNK_2170 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PNK_0809 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PNK_2050 dut; Deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PNK_0999 Short-chain dehydrogenase/reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PNK_1794 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pnl00250]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PNK_1596 nadB; putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PNK_1807 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D PNK_0884 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D PNK_0316 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PNK_0306 gdhB; eucaryotic NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PNK_2312 putA; bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PNK_0637 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PNK_1014 NAD dependent epimerase/dehydratase family protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PNK_0556 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:pnl00260]
D PNK_1360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PNK_0777 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PNK_1323 ltaE; Low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PNK_1921 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PNK_0157 pgma1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_0715 pgma3; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_1552 putative phosphoglycerate mutase protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D PNK_0999 Short-chain dehydrogenase/reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PNK_0965 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PNK_0962 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PNK_2032 gcvPA; glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PNK_2031 gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PNK_2034 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_2033 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PNK_0582 pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PNK_0515 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_0966 metB; cystathionine gamma-synthase/cystathionine beta-lysase family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_1237 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:pnl00270]
D PNK_0514 cysK; cysteine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PNK_0515 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_0966 metB; cystathionine gamma-synthase/cystathionine beta-lysase family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_2219 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PNK_2240 putative multicopper oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PNK_0797 ahcY; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PNK_0751 conserved hypothetical protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D PNK_1360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PNK_0777 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PNK_0854 mdh1; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PNK_1237 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:pnl00280]
D PNK_0245 ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pnl00290]
D PNK_0245 ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:pnl00300]
D PNK_1360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PNK_0777 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PNK_1499 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PNK_1498 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PNK_1923 dapF; putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PNK_1500 aspc3; L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PNK_0446 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PNK_0616 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PNK_1423 alr; putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:pnl00310]
D PNK_0791 sucB; 2-oxogluturate dehydrogenase complex E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:pnl00220]
D PNK_0637 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PNK_1014 NAD dependent epimerase/dehydratase family protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PNK_0306 gdhB; eucaryotic NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:pnl00330]
D PNK_1143 speA; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PNK_1140 aguA; putative Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PNK_1141 aguB; putative N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PNK_1545 astA; putative Arginine N-succinyltransferase beta subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D PNK_1547 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D PNK_1546 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D PNK_0731 proC; putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PNK_2312 putA; bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PNK_0733 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PNK_0732 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism [PATH:pnl00350]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PNK_2318 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism [PATH:pnl00380]
D PNK_1420 Conserved hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D PNK_0791 sucB; 2-oxogluturate dehydrogenase complex E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pnl00400]
D PNK_1640 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PNK_0062 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PNK_1233 putative 3-phosphoshikimate 1-carboxyvinyltransferase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D PNK_1232 aroK; putative shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PNK_1231 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PNK_0728 putative chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:pnl00430]
D PNK_0316 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PNK_0306 gdhB; eucaryotic NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PNK_1474 hypothetical protein K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PNK_0377 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D PNK_0859 phnP; putative metal-dependent hydrolase, beta-lactamase superfamily I K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pnl00450]
D PNK_0515 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_0966 metB; cystathionine gamma-synthase/cystathionine beta-lysase family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_0193 putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PNK_0916 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PNK_1386 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pnl00460]
D PNK_1555 bgl; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PNK_1921 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pnl00470]
D PNK_1423 alr; putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PNK_2215 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PNK_0618 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PNK_1807 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D PNK_0884 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D PNK_1923 dapF; putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:pnl00480]
D PNK_0776 pepA; putative leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PNK_2118 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PNK_0451 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PNK_0976 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pnl00540]
D PNK_1969 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PNK_1971 lpxC; UDP-3-O-acyl N-acetylglycosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PNK_0903 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PNK_0550 lpxb1; putative lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PNK_2123 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PNK_2117 kpsF; Putative arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PNK_0410 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PNK_0980 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PNK_0982 gseA; 3-deoxy-manno-octulosonate K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PNK_2124 gmhA; putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PNK_1566 hldE; Bifunctional protein hldE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D PNK_1904 hldC; heptose adenosyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D PNK_1567 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PNK_1478 waaC; putative lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PNK_2334 waaF; putative lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pnl00541]
D PNK_0560 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PNK_0940 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PNK_0067 wcaG; NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PNK_2273 rmlA; Glucose 1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PNK_2270 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PNK_2272 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PNK_2271 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PNK_1445 hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D PNK_0001 glmu1; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PNK_0397 Polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:pnl00550]
D PNK_0238 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PNK_1601 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PNK_0622 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PNK_0618 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PNK_0446 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PNK_0616 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PNK_1423 alr; putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PNK_0455 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PNK_1890 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PNK_0617 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PNK_0621 murG; putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PNK_0445 pbp1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PNK_1979 dac; serine-type D-Ala-D-Ala carboxypeptidase (penicillin binding protein) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PNK_0198 putative serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pnl00552]
D PNK_1890 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PNK_2242 hypothetical protein K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pnl00543]
D PNK_1197 algI; alginate O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D PNK_0938 exopolysaccharide biosynthesis protein K16566 exoY; exopolysaccharide production protein ExoY
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pnl00730]
D PNK_0158 nifs1; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_1469 nifs3; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_0953 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PNK_1501 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PNK_0126 rsgA; putative ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PNK_1550 adk3; putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PNK_0850 adk1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pnl00740]
D PNK_1224 ribA; putative 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PNK_0848 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PNK_1225 ribH; riboflavin synthase, beta subunit K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PNK_1223 ribC; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PNK_1366 ribF; putative riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PNK_1631 putative nudix hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:pnl00750]
D PNK_0254 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PNK_0490 conserved hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PNK_1307 putative aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PNK_0250 pdxS; Pyridoxal biosynthesis lyase K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PNK_0251 pdxT; Glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pnl00760]
D PNK_1596 nadB; putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PNK_1848 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PNK_1342 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PNK_0638 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PNK_1475 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PNK_2084 nadE; putative glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PNK_1847 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PNK_0952 ppnK; putative NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PNK_1382 sthA; NAD(P) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pnl00770]
D PNK_1475 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D PNK_2302 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PNK_0225 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PNK_0919 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:pnl00780]
D PNK_0641 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PNK_1870 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_2381 fabg3; putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0910 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase protein FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0711 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_1970 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PNK_0716 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PNK_1785 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PNK_1783 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PNK_1784 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PNK_1786 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PNK_0164 birA; putative biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pnl00785]
D PNK_0144 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PNK_2042 lplA; putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PNK_2198 putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0896 pdhA; pyruvate dehydrogenase, E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PNK_0897 pdhB; pyruvate dehydrogenase, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PNK_0898 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PNK_0790 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PNK_0791 sucB; 2-oxogluturate dehydrogenase complex E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PNK_2032 gcvPA; glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PNK_2031 gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PNK_2034 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PNK_2033 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pnl00790]
D PNK_1917 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PNK_0409 folK; putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PNK_1614 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PNK_1603 folC; putative folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PNK_1224 ribA; putative 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PNK_0415 pabA; putative para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PNK_0528 pabB; putative para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PNK_0530 pabC; putative 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
C 00670 One carbon pool by folate [PATH:pnl00670]
D PNK_0934 folD; methenyltetrahydrofolate cyclohydrolase/methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PNK_1921 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PNK_1968 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PNK_2034 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PNK_0005 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pnl00860]
D PNK_0263 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PNK_0395 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PNK_0880 hemL; Glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PNK_0086 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PNK_2046 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PNK_2047 hemD; Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PNK_2059 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PNK_0044 hemF; Coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PNK_2058 hemY; putative protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PNK_1020 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PNK_0668 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PNK_1378 Cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pnl00130]
D PNK_0821 menG; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PNK_0811 menF; menaquinone-specific isochorismate synthase, menF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PNK_0812 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PNK_0813 menH; putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D PNK_1647 menC; putative o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PNK_0818 menE; putative o-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PNK_0816 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PNK_0817 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pnl00900]
D PNK_0953 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PNK_0283 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PNK_0468 yacM; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PNK_1571 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PNK_0235 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PNK_1379 gcpE; GcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PNK_0804 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PNK_0002 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PNK_0939 crtE; Farnesyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PNK_0455 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PNK_2060 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pnl00523]
D PNK_2273 rmlA; Glucose 1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PNK_2270 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PNK_2272 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PNK_2271 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:pnl01054]
D PNK_1807 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D PNK_0884 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PNK_0811 menF; menaquinone-specific isochorismate synthase, menF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D PNK_2270 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pnl00946]
D PNK_1555 bgl; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pnl00332]
D PNK_0733 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PNK_0732 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pnl00261]
D PNK_1360 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PNK_0777 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PNK_1499 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PNK_1498 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pnl00521]
D PNK_1119 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PNK_0039 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PNK_1001 impA; putative monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PNK_2273 rmlA; Glucose 1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PNK_2270 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PNK_2272 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PNK_2271 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PNK_1119 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pnl00525]
D PNK_2273 rmlA; Glucose 1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PNK_2270 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D PNK_0909 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PNK_1870 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_2381 fabg3; putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0910 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase protein FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0711 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0716 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PNK_0911 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pnl00999]
D PNK_2219 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PNK_1233 putative 3-phosphoshikimate 1-carboxyvinyltransferase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D PNK_1555 bgl; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
D PNK_0011 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pnl00625]
D PNK_2318 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:pnl00626]
D PNK_2318 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PNK_1829 adhB; Uncharacterized zinc-type alcohol dehydrogenase-like protein AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pnl03020]
D PNK_1708 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PNK_1707 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PNK_1939 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pnl03010]
D PNK_1361 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PNK_2253 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PNK_1954 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PNK_0372 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PNK_1944 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PNK_1574 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PNK_0210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PNK_1947 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PNK_0871 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PNK_0208 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PNK_1940 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PNK_0211 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PNK_1941 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PNK_1592 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PNK_1405 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PNK_1394 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PNK_1951 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PNK_1573 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PNK_1956 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PNK_2259 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PNK_1899 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PNK_1712 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PNK_1957 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PNK_1960 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PNK_1959 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PNK_1948 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PNK_1946 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PNK_1710 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PNK_1572 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PNK_1711 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PNK_1713 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PNK_0870 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PNK_1950 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PNK_1943 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PNK_1953 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PNK_1938 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PNK_1945 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PNK_1392 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PNK_1481 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PNK_0218 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PNK_1955 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PNK_1958 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PNK_1949 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PNK_1576 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PNK_0219 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PNK_1384 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PNK_1952 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PNK_1398 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PNK_0544 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PNK_0972 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PNK_1482 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PNK_1591 hypothetical protein K02919 RP-L36; large subunit ribosomal protein L36
D PNK_r0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pnl00970]
D PNK_1027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PNK_0053 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PNK_1038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PNK_2325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0387 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0407 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0449 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0676 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PNK_p0115 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PNK_1345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PNK_0612 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PNK_1578 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PNK_2247 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PNK_0362 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_2254 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_0361 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_0363 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_1889 tRNA-His K14226 tRNA-His; tRNA His
D PNK_1028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PNK_1039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PNK_1934 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_0457 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_0472 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_0389 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_1465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_2246 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PNK_1842 tRNA-Met K14230 tRNA-Met; tRNA Met
D PNK_0984 tRNA-Met K14230 tRNA-Met; tRNA Met
D PNK_0983 tRNA-Met K14230 tRNA-Met; tRNA Met
D PNK_0217 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PNK_0796 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PNK_2428 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PNK_1426 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PNK_2157 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PNK_2162 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PNK_2397 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_p0116 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_1718 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_1336 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_1716 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PNK_1335 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PNK_1485 tRNA-Val K14237 tRNA-Val; tRNA Val
D PNK_1344 tRNA-Val K14237 tRNA-Val; tRNA Val
D PNK_0263 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PNK_1522 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PNK_1523 gatB; glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PNK_1521 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PNK_2065 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PNK_1990 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PNK_0394 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PNK_1490 glyQS; Glycine--tRNA ligase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PNK_2415 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PNK_1484 putative threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PNK_0312 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PNK_0646 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PNK_1386 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PNK_1968 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PNK_1635 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PNK_0840 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PNK_1853 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PNK_0651 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PNK_0240 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PNK_0531 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PNK_1989 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PNK_1480 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PNK_0420 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PNK_0693 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PNK_0168 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pnl03060]
D PNK_1942 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PNK_1715 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D PNK_0958 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PNK_0271 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D PNK_2096 yajC; putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PNK_0800 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PNK_0132 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PNK_1395 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PNK_0566 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PNK_2425 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PNK_2424 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D PNK_1851 lepB; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PNK_2142 lspA; putative lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pnl04122]
D PNK_0158 nifs1; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_1469 nifs3; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_2146 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:pnl03018]
D PNK_0128 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PNK_1406 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PNK_0839 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PNK_0594 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PNK_1018 dbp2; hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PNK_0741 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PNK_0224 rho; Transcription termination factor rho K03628 rho; transcription termination factor Rho
D PNK_0827 cnpD; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PNK_2433 dnak7; putative chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0303 dnak1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0684 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0609 groel1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_2316 groel3; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0554 pcnb3; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PNK_0124 pcnb1; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pnl03030]
D PNK_0249 dnaq1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0702 dnaq3; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_1984 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PNK_1881 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PNK_0810 holB; DNA polymerase III, delta' subunit, holB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PNK_0780 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PNK_0926 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PNK_2161 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PNK_1493 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PNK_0775 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PNK_1391 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PNK_1508 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D PNK_0226 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PNK_0867 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pnl03410]
D PNK_2330 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PNK_2418 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PNK_0083 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PNK_1222 fpg; putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PNK_1832 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PNK_2456 alkA; putative DNA-3-methyladenine glycosidase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PNK_0503 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PNK_1860 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PNK_0393 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PNK_0226 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PNK_0269 recJ; ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PNK_0867 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pnl03420]
D PNK_2068 putative transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PNK_1625 uvra3; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PNK_0629 uvra1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D PNK_0171 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D PNK_1486 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PNK_1587 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PNK_2311 UvrD-like DNA helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PNK_0226 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PNK_0867 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pnl03430]
D PNK_0660 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D PNK_0123 mutL; methyl-directed mismatch repair (MMR) protein, mutL K03572 mutL; DNA mismatch repair protein MutL
D PNK_1587 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PNK_2311 UvrD-like DNA helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PNK_0955 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PNK_0954 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PNK_0269 recJ; ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PNK_0775 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PNK_1984 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PNK_0926 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PNK_1881 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PNK_0780 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PNK_0810 holB; DNA polymerase III, delta' subunit, holB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PNK_0249 dnaq1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0702 dnaq3; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0867 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pnl03440]
D PNK_0269 recJ; ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PNK_0775 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PNK_0925 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PNK_0388 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PNK_0900 recR; Recombination protein recR K06187 recR; recombination protein RecR
D PNK_0003 recA; Protein recA K03553 recA; recombination protein RecA
D PNK_0226 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PNK_2331 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D PNK_0770 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PNK_2332 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PNK_2403 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PNK_2404 recC; Putative exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PNK_2401 recd3; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PNK_1495 recd1; exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PNK_1984 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PNK_0926 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PNK_1881 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PNK_0780 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PNK_0810 holB; DNA polymerase III, delta' subunit, holB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PNK_0249 dnaq1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0702 dnaq3; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0655 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:pnl03450]
D PNK_2193 hypothetical protein K10979 ku; DNA end-binding protein Ku
D PNK_2195 putative ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PNK_2194 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
D PNK_0535 hypothetical protein K01408 IDE; insulysin [EC:3.4.24.56]
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pnl02010]
D PNK_2346 ssuA; Putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PNK_2344 ABC-type transporter, permease subunit K15554 ssuC; sulfonate transport system permease protein
D PNK_2345 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PNK_1068 potD; putative spermidine/putrescine-binding protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PNK_1067 potC; Spermidine/putrescine transport system permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PNK_1066 potB; putative ABC-type spermidine/putrescine transport system, permease subunit I K11071 potB; spermidine/putrescine transport system permease protein
D PNK_1065 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PNK_0874 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PNK_0876 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PNK_0875 ABC-type transporter, ATPase subunit K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PNK_1911 yaeC; ABC transporter substrate binding protein yaeC K02073 metQ; D-methionine transport system substrate-binding protein
D PNK_1910 metI; D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PNK_1909 metN; Methionine import ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PNK_0298 oppa1; putative periplasmic oligo/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PNK_0297 oppB; ABC-type oligopeptide transporter, permease subunit K15581 oppB; oligopeptide transport system permease protein
D PNK_0296 oppc1; putative ABC-type oligopeptide transporter, permease subunit K15582 oppC; oligopeptide transport system permease protein
D PNK_0295 oppd1; putative ABC-type oligopeptide transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D PNK_0294 oppf1; ATP binding protein, component of oligopeptide permease K10823 oppF; oligopeptide transport system ATP-binding protein
D PNK_2154 ABC-type transporter, substrate-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D PNK_2156 ABC-type transporter, permease subunit K09816 znuB; zinc transport system permease protein
D PNK_2155 ABC-type transporter, ATPase subunit K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PNK_0277 putative periplasmic solute binding family protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PNK_0279 ABC-type transporter, permease subunit K11708 troC; manganese/zinc/iron transport system permease protein
D PNK_0280 ABC-type transporter, permease subunit K11709 troD; manganese/zinc/iron transport system permease protein
D PNK_0278 putative ABC-type transporter, ATPase subunit K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PNK_2179 bioY; putative biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PNK_0181 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D PNK_0182 putative amino acid ABC transporter ATP binding subunit K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PNK_0971 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PNK_0970 ABC transporter, ATPase subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PNK_0881 Conserved hypothetical protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PNK_1415 putative permease, YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein
D PNK_1416 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D PNK_0413 putative ABC-type transporter, ATPase subunit K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PNK_0287 msba1; putative Lipid A export ATP-binding/permease protein MsbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PNK_0288 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:pnl02060]
D PNK_1883 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PNK_0687 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D PNK_1884 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PNK_2051 ptsN; PTS system IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PNK_2052 ptsN2; nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:pnl03070]
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_0332 gspd3; component D of type II secretion pathway K03219 yscC; type III secretion protein C
D PNK_0206 sctJ; type III secretion lipoprotein SctJ K03222 yscJ; type III secretion protein J
D PNK_0203 sctR; type III secretion inner membrane protein SctR K03226 yscR; type III secretion protein R
D PNK_0202 sctS; type III secretion inner membrane protein SctS K03227 yscS; type III secretion protein S
D PNK_0201 yscT; type III secretion inner membrane protein SctT K03228 yscT; type III secretion protein T
D PNK_1371 sctU; type III secretion inner membrane protein SctU K03229 yscU; type III secretion protein U
D PNK_1372 sctV; type III secretion pathway protein SctV K03230 yscV; type III secretion protein V
D PNK_0337 sctN; type III secretion cytoplasmic ATPase SctN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D PNK_0204 sctL; putative type III secretion protein SctL K03223 yscL; type III secretion protein L
D PNK_0097 gspd1; putative general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PNK_0099 gspF; putative general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PNK_0098 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PNK_0271 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D PNK_1715 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D PNK_0958 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PNK_1942 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PNK_2096 yajC; putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PNK_0800 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PNK_0132 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PNK_0566 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PNK_1395 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PNK_2425 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PNK_2424 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pnl02020]
D PNK_0119 phoR; two-component sensor histidine kinase phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PNK_2225 phoB; two-component response regulator phoB K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PNK_0573 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PNK_2019 mdtA; putative multidrug resistance protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D PNK_2391 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PNK_2349 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PNK_2388 atkA; Potassium-transporting ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PNK_2352 kdpA; potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PNK_2389 atkB; Potassium-transporting ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PNK_2351 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PNK_2390 atkC; Potassium-transporting ATPase, subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PNK_2350 kdpC; potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PNK_0439 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D PNK_0799 dnaA1; Chromosomal replication initiator protein DnaA 1 K02313 dnaA; chromosomal replication initiator protein
D PNK_1986 glpT; putative phosphoglycerate transporter, major facilitator superfamily K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PNK_1095 putative beta-lactamase protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PNK_0637 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PNK_0373 two-component sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D PNK_0374 atoc1; sigma-54 dependent response regulator atoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D PNK_2308 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PNK_1156 chew1; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PNK_1154 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PNK_1152 Conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_1153 putative chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_1539 wspC; methyltransferase, CheR-like K13486 wspC; chemotaxis protein methyltransferase WspC
D PNK_0769 wspA; Laminin subunit alpha A chain; Flags: Precursor K13487 wspA; methyl-accepting chemotaxis protein WspA
D PNK_0718 Methyl-accepting chemotaxis signalling domain-containing protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D PNK_1540 wspB; Chemotaxis protein cheW K13488 wspB; chemotaxis-related protein WspB
D PNK_1538 chew3; Chemotaxis protein cheW K13489 wspD; chemotaxis-related protein WspD
D PNK_1537 Chemotaxis protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PNK_0726 putative two-component response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D PNK_0027 fixN; putative cytochrome c oxidase, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D PNK_0028 fixO; putative cytochrome oxidase, cytochrome c subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D PNK_1611 cydA; cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PNK_1610 cydB; cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_0184 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PNK_0803 wzb; low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pnl02024]
D PNK_1640 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PNK_0848 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PNK_1761 putative outer membrane efflux protein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PNK_0298 oppa1; putative periplasmic oligo/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PNK_0297 oppB; ABC-type oligopeptide transporter, permease subunit K15581 oppB; oligopeptide transport system permease protein
D PNK_0296 oppc1; putative ABC-type oligopeptide transporter, permease subunit K15582 oppC; oligopeptide transport system permease protein
D PNK_0295 oppd1; putative ABC-type oligopeptide transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D PNK_0294 oppf1; ATP binding protein, component of oligopeptide permease K10823 oppF; oligopeptide transport system ATP-binding protein
D PNK_2299 oppa3; substrate binding proteins, component of oligopeptide permease, oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PNK_2300 dppB; dipeptide transport system permease, dppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PNK_2301 oppc3; putative ABC-type oligopeptide transporter, permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PNK_0800 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PNK_0271 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D PNK_1715 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D PNK_0958 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PNK_1942 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PNK_2096 yajC; putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PNK_0132 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PNK_0566 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PNK_1395 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pnl02030]
D PNK_1154 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PNK_1156 chew1; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PNK_1152 Conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_1153 putative chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_0334 sctQ; putative type III secretion translocase SctQ K02417 fliN; flagellar motor switch protein FliN
C 02040 Flagellar assembly [PATH:pnl02040]
D PNK_0334 sctQ; putative type III secretion translocase SctQ K02417 fliN; flagellar motor switch protein FliN
D PNK_0175 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PNK_2308 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PNK_0128 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D PNK_1378 Cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pnl01501]
D PNK_2182 nagA; putative beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PNK_1095 putative beta-lactamase protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D PNK_0298 oppa1; putative periplasmic oligo/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PNK_0297 oppB; ABC-type oligopeptide transporter, permease subunit K15581 oppB; oligopeptide transport system permease protein
D PNK_0296 oppc1; putative ABC-type oligopeptide transporter, permease subunit K15582 oppC; oligopeptide transport system permease protein
D PNK_0295 oppd1; putative ABC-type oligopeptide transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D PNK_0294 oppf1; ATP binding protein, component of oligopeptide permease K10823 oppF; oligopeptide transport system ATP-binding protein
D PNK_1764 acrA; multidrug-efflux transport protein acrA K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1418 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1763 acrb3; multidrug-efflux transporter K18138 acrB; multidrug efflux pump
D PNK_1761 putative outer membrane efflux protein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_0445 pbp1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pnl01502]
D PNK_1423 alr; putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PNK_0616 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PNK_0617 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PNK_0621 murG; putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pnl01503]
D PNK_0447 amiA; putative N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PNK_0573 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PNK_1764 acrA; multidrug-efflux transport protein acrA K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1418 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1763 acrb3; multidrug-efflux transporter K18138 acrB; multidrug efflux pump
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_1969 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pnl01000]
C 01001 Protein kinases [BR:pnl01001]
D PNK_1630 pknD; Serine/threonine-protein kinase PknD K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PNK_0333 pkn; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PNK_1981 rsbW; Anti-sigma F factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PNK_0119 phoR; two-component sensor histidine kinase phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PNK_2391 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PNK_2349 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PNK_0373 two-component sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D PNK_0906 Histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PNK_1238 Conserved hypothetical membrane protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PNK_1154 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PNK_1537 Chemotaxis protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
C 01009 Protein phosphatases and associated proteins [BR:pnl01009]
D PNK_0797 ahcY; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PNK_2088 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PNK_1470 putative serine/threonine PP2C protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:pnl01002]
D PNK_2142 lspA; putative lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PNK_1138 Peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase
D PNK_0619 nlpD; putative muramidase K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D PNK_0299 putative endopeptidase ykfC K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D PNK_0556 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PNK_2373 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D PNK_1472 conserved putative membrane protein K07052 K07052; CAAX protease family protein
D PNK_0480 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D PNK_0686 yjbG; Oligoendopeptidase F homolog K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PNK_0535 hypothetical protein K01408 IDE; insulysin [EC:3.4.24.56]
D PNK_0580 Metalloprotease K06972 PITRM1; presequence protease [EC:3.4.24.-]
D PNK_0539 Conserved hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PNK_1466 putative metalloprotease K07263 pqqL; zinc protease [EC:3.4.24.-]
D PNK_0776 pepA; putative leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PNK_0579 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PNK_1543 putative carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PNK_1533 map1; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PNK_1770 map3; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PNK_1730 hypothetical protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PNK_0120 pepP; putative aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PNK_1424 putative Zn-dependent thermostable carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PNK_1411 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PNK_1204 htpX; putative heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PNK_0569 hypothetical protein K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D PNK_0284 putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PNK_0573 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PNK_1979 dac; serine-type D-Ala-D-Ala carboxypeptidase (penicillin binding protein) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PNK_0198 putative serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PNK_1922 clpp3; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PNK_0359 clpp1; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PNK_1903 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PNK_0589 lexA; putative LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PNK_1851 lepB; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PNK_0266 tsp3; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PNK_0216 tsp1; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PNK_0228 putative signal peptide peptidase sppA K04773 sppA; protease IV [EC:3.4.21.-]
D PNK_1905 glpG; Rhomboid family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D PNK_1300 Rhomboid family protein K07059 K07059; rhomboid family protein
C 01003 Glycosyltransferases [BR:pnl01003]
D PNK_1580 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pnl01005]
D PNK_1969 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PNK_0550 lpxb1; putative lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PNK_1971 lpxC; UDP-3-O-acyl N-acetylglycosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D PNK_0903 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PNK_0591 Conserved putative membrane protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D PNK_2123 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PNK_0982 gseA; 3-deoxy-manno-octulosonate K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PNK_0410 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PNK_0980 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PNK_2117 kpsF; Putative arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PNK_1566 hldE; Bifunctional protein hldE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D PNK_1904 hldC; heptose adenosyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D PNK_1478 waaC; putative lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D PNK_2334 waaF; putative lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D PNK_2124 gmhA; putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PNK_1567 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pnl01011]
D PNK_0238 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PNK_1601 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PNK_0622 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PNK_0618 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PNK_0446 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PNK_1423 alr; putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PNK_2215 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PNK_0617 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PNK_0621 murG; putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PNK_1890 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PNK_0392 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D PNK_0445 pbp1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PNK_1979 dac; serine-type D-Ala-D-Ala carboxypeptidase (penicillin binding protein) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PNK_0198 putative serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PNK_0619 nlpD; putative muramidase K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D PNK_0447 amiA; putative N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pnl01004]
D PNK_0909 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PNK_0908 fabH; 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PNK_0641 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PNK_1870 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_2381 fabg3; putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0910 fabg1; 3-oxoacyl-[acyl-carrier-protein] reductase protein FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_0711 Short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PNK_1970 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PNK_0716 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PNK_0615 putative fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PNK_1863 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_1303 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PNK_0540 plsB; glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D PNK_0545 plsX; putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PNK_0452 plsC; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:pnl01008]
D PNK_1807 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D PNK_0884 Asp/Glu/Hydantoin racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pnl01006]
D PNK_0002 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PNK_0939 crtE; Farnesyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PNK_0455 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PNK_0631 miaA; tRNA delta-2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PNK_0817 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PNK_0668 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pnl01007]
D PNK_0263 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PNK_0693 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PNK_0168 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PNK_0646 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PNK_0240 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PNK_1386 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PNK_1853 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PNK_1635 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PNK_0840 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PNK_0651 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PNK_1990 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PNK_0394 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PNK_1989 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PNK_0312 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PNK_0531 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PNK_2415 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PNK_1484 putative threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PNK_2065 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PNK_1480 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PNK_0420 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PNK_0051 aspc1; Aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D PNK_1500 aspc3; L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PNK_0965 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PNK_1785 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PNK_1783 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PNK_0880 hemL; Glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PNK_1445 hypothetical protein K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pnl00194]
D PNK_0024 hypothetical protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D PNK_1648 atpc1; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PNK_1649 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PNK_1650 atpG; putative F-type ATP synthase, subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PNK_1651 atpA; F-type ATP synthase, subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PNK_1652 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PNK_1653 atpF; putative F-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PNK_1654 atpc3; putative F-type ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PNK_1655 atpB; putative F-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PNK_1657 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pnl03000]
D PNK_2457 putative methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PNK_2456 alkA; putative DNA-3-methyladenine glycosidase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PNK_0500 ydcH; putative Uncharacterized HTH-type transcriptional regulator ydcH K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PNK_p0105 putative HTH-type transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PNK_2148 fur; putative ferric uptake regulator protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PNK_0164 birA; putative biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PNK_0513 putative transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PNK_2339 hypothetical protein K21829 dauR; D-arginine utilization repressor
D PNK_2312 putA; bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D PNK_0989 csoR; Copper-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PNK_0064 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PNK_0305 hrcA; Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D PNK_0873 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D PNK_2143 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PNK_2144 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:pnl03021]
D PNK_1939 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PNK_1708 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PNK_1707 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PNK_0175 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PNK_2308 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PNK_1362 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D PNK_1600 nusB; putative transcription antitermination factor, NusB family K03625 nusB; transcription antitermination protein NusB
D PNK_1714 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PNK_1536 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PNK_0904 atoc3; sigma-54 dependent response regulator atoC K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PNK_0563 Anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D PNK_1981 rsbW; Anti-sigma F factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PNK_2143 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PNK_0224 rho; Transcription termination factor rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pnl03019]
D PNK_0541 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PNK_2044 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PNK_0827 cnpD; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PNK_0839 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PNK_0594 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PNK_1018 dbp2; hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PNK_0741 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PNK_0128 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PNK_1406 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PNK_0224 rho; Transcription termination factor rho K03628 rho; transcription termination factor Rho
D PNK_2433 dnak7; putative chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0303 dnak1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0684 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0609 groel1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_2316 groel3; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0554 pcnb3; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PNK_0124 pcnb1; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:pnl03011]
D PNK_1361 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PNK_2253 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PNK_1954 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PNK_0372 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PNK_1944 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PNK_1574 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PNK_0210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PNK_1947 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PNK_0871 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PNK_0208 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PNK_1940 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PNK_0211 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PNK_1941 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PNK_1592 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PNK_1405 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PNK_1394 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PNK_1951 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PNK_1573 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PNK_1956 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PNK_2259 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PNK_1899 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PNK_1712 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PNK_1957 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PNK_1960 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PNK_1959 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PNK_1948 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PNK_1946 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PNK_1572 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PNK_1711 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PNK_1713 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PNK_1710 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PNK_0870 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PNK_1950 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PNK_1943 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PNK_1953 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PNK_1938 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PNK_1945 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PNK_1392 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PNK_1481 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PNK_0218 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PNK_1955 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PNK_1958 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PNK_1949 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PNK_0219 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PNK_1384 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PNK_1952 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PNK_1398 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PNK_0544 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PNK_0972 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PNK_1482 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PNK_1591 hypothetical protein K02919 RP-L36; large subunit ribosomal protein L36
D PNK_1576 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PNK_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pnl03009]
D PNK_2044 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PNK_0220 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PNK_2143 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D PNK_1362 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D PNK_1600 nusB; putative transcription antitermination factor, NusB family K03625 nusB; transcription antitermination protein NusB
D PNK_1714 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PNK_1978 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PNK_1976 rsmB; hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PNK_2230 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PNK_1617 putative RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PNK_0443 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PNK_0781 putative tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PNK_0611 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PNK_0923 SPOUT methyltransferase family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PNK_0847 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PNK_2134 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PNK_1290 conserved hypothetical protein K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D PNK_1369 hypothetical protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D PNK_0386 rlmn1; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PNK_1488 rlmn3; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PNK_0268 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PNK_2459 rumA; 23S rRNA (Uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PNK_2097 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PNK_0156 putative ribosomal large chain pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PNK_0403 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PNK_2132 RNA pseudouridylate synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PNK_2260 rluA; ribosomal large subunit pseudouridine synthase A K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PNK_1137 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PNK_1742 Acetyltransferase (GNAT)-family protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D PNK_0653 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PNK_2320 prmA; putative ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PNK_0541 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PNK_0978 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PNK_0594 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PNK_1018 dbp2; hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PNK_0126 rsgA; putative ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PNK_0328 engA; GTP-binding protein EngA K03977 engA; GTPase
D PNK_0860 hflX; GTPase HflX K03665 hflX; GTPase
D PNK_0194 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PNK_1364 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PNK_0640 Iojap family protein K09710 ybeB; ribosome-associated protein
D PNK_0829 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D PNK_0385 conserved hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D PNK_1370 ychF; translation-associated GTPase K06942 ychF; ribosome-binding ATPase
D PNK_0543 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pnl03016]
D PNK_1906 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PNK_0263 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PNK_0531 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PNK_1853 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PNK_0840 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PNK_1386 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PNK_0240 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PNK_0651 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PNK_1990 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PNK_2065 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PNK_0394 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PNK_2415 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PNK_1484 putative threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PNK_0312 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PNK_0646 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PNK_1635 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PNK_1989 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PNK_1480 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PNK_0420 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PNK_0693 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PNK_0168 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PNK_0404 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PNK_1734 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PNK_1532 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PNK_1161 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PNK_0469 trua1; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PNK_1505 trua3; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PNK_1365 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PNK_0158 nifs1; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_1469 nifs3; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_0194 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PNK_0631 miaA; tRNA delta-2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PNK_2329 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PNK_2199 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PNK_1590 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PNK_1010 rnr; ribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D PNK_0273 conserved hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PNK_2265 Putative 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PNK_1490 glyQS; Glycine--tRNA ligase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PNK_0511 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PNK_1402 yfhC; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PNK_0010 hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PNK_0997 dusC; putative tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D PNK_0869 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PNK_0863 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PNK_1393 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PNK_1992 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PNK_0125 putative rRNA methylase, SpoU family K03437 spoU; RNA methyltransferase, TrmH family
D PNK_2133 putative rRNA methylase, SpoU family K03437 spoU; RNA methyltransferase, TrmH family
D PNK_2146 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PNK_1338 putative PP-loop superfamily ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PNK_0310 selU; putative tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PNK_1443 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PNK_1412 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PNK_1900 putative peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PNK_0973 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PNK_0247 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PNK_0839 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PNK_1406 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pnl03012]
D PNK_1160 hypothetical protein K03113 EIF1; translation initiation factor 1
D PNK_1363 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PNK_1483 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PNK_2360 yheS; ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PNK_2252 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D PNK_1717 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D PNK_0209 fusA; Elongation factor G K02355 fusA; elongation factor G
D PNK_1397 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PNK_2248 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D PNK_1396 hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PNK_1575 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PNK_1719 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PNK_1353 efp1; Elongation factor P K02356 efp; elongation factor P
D PNK_2079 efp3; Elongation factor P K02356 efp; elongation factor P
D PNK_2080 epmA; Elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D PNK_0239 kamA; putative lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D PNK_1818 epmC; Elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D PNK_0524 prfb1; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PNK_1004 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D PNK_1766 prfb3; Peptide chain release factor 2 K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pnl03110]
D PNK_0244 clpb1; ATP-dependent Clp protease, ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PNK_1380 clpb5; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PNK_1019 clpb3; heat shock protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PNK_2057 clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PNK_0358 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PNK_2088 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PNK_2433 dnak7; putative chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0303 dnak1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0684 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0609 groel1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_2316 groel3; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_1898 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D PNK_1570 hypothetical protein K03687 GRPE; molecular chaperone GrpE
D PNK_0304 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PNK_2152 shsP; Small heat shock protein K13993 HSP20; HSP20 family protein
D PNK_0685 groes1; Co-chaperonin GroES K04078 groES; chaperonin GroES
D PNK_2315 groes3; Co-chaperonin GroES K04078 groES; chaperonin GroES
D PNK_0573 htrA; DO serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PNK_1411 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PNK_1655 atpB; putative F-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PNK_1998 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pnl04131]
D PNK_0414 ndk1; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PNK_0416 ndk3; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PNK_1936 gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PNK_0157 pgma1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_1620 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PNK_2088 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:pnl04121]
D PNK_1367 hypothetical protein K10268 FBXL2_20; F-box and leucine-rich repeat protein 2/20
C 03051 Proteasome [BR:pnl03051]
D PNK_2088 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pnl03032]
D PNK_0694 ihfA; Integration host factor subunit alpha (IHF-alpha) K05788 ihfB; integration host factor subunit beta
D PNK_p0008 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PNK_p0011 ihfA; Integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta
D PNK_0439 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D PNK_0799 dnaA1; Chromosomal replication initiator protein DnaA 1 K02313 dnaA; chromosomal replication initiator protein
D PNK_2161 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PNK_1493 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PNK_0775 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PNK_1984 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PNK_0926 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PNK_0780 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PNK_0810 holB; DNA polymerase III, delta' subunit, holB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PNK_0249 dnaq1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0702 dnaq3; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_1881 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PNK_1391 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PNK_1508 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D PNK_0226 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PNK_0867 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PNK_0808 gyra3; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PNK_0807 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PNK_0399 gyra1; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PNK_0398 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PNK_0060 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pnl03036]
D PNK_2044 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PNK_0694 ihfA; Integration host factor subunit alpha (IHF-alpha) K05788 ihfB; integration host factor subunit beta
D PNK_p0008 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PNK_p0011 ihfA; Integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta
D PNK_0439 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D PNK_0799 dnaA1; Chromosomal replication initiator protein DnaA 1 K02313 dnaA; chromosomal replication initiator protein
D PNK_1802 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein
D PNK_0721 dps; putative DNA protection during starvation family protein K04047 dps; starvation-inducible DNA-binding protein
D PNK_0313 putative chromosome segregation SMC protein K03529 smc; chromosome segregation protein
D PNK_0214 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D PNK_0213 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D PNK_0445 pbp1; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PNK_1891 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PNK_0620 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PNK_0447 amiA; putative N-acetylmuramoyl alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PNK_1764 acrA; multidrug-efflux transport protein acrA K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1418 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_0365 mreB; Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D PNK_0165 rodA; Septum-peptidoglycan biosynthetic protein K05837 rodA; rod shape determining protein RodA
D PNK_2416 hypothetical protein K03496 parA; chromosome partitioning protein
D PNK_p0141 parA; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PNK_0064 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PNK_0399 gyra1; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PNK_0398 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PNK_2199 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PNK_1907 xerC; Site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PNK_1527 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PNK_0275 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PNK_0601 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PNK_2378 Adenosine monophosphate-protein transferase SoFic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PNK_0248 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pnl03400]
D PNK_2011 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PNK_1516 phrB; Putative photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PNK_2418 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PNK_0083 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PNK_2330 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PNK_1743 putative nudix hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_1560 putative nudix hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_1385 Conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_0054 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_1109 RNA pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_1467 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_1771 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PNK_2050 dut; Deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PNK_2457 putative methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PNK_1274 deoxyribodipyrimidine photolyase-like protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D PNK_2026 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D PNK_2456 alkA; putative DNA-3-methyladenine glycosidase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PNK_0503 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PNK_1222 fpg; putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PNK_1832 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D PNK_1860 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PNK_0393 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PNK_1437 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PNK_0269 recJ; ssDNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PNK_0867 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PNK_0226 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PNK_1625 uvra3; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PNK_0629 uvra1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D PNK_0171 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D PNK_1486 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D PNK_1587 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PNK_2311 UvrD-like DNA helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PNK_1708 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PNK_1707 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PNK_1939 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PNK_2068 putative transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PNK_0660 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D PNK_0123 mutL; methyl-directed mismatch repair (MMR) protein, mutL K03572 mutL; DNA mismatch repair protein MutL
D PNK_0955 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PNK_0954 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PNK_1984 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PNK_0926 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PNK_0780 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PNK_0810 holB; DNA polymerase III, delta' subunit, holB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PNK_0249 dnaq1; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_0702 dnaq3; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PNK_1881 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PNK_0775 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PNK_2403 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PNK_2404 recC; Putative exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PNK_2401 recd3; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PNK_1495 recd1; exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PNK_0003 recA; Protein recA K03553 recA; recombination protein RecA
D PNK_2331 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D PNK_0770 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PNK_2332 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PNK_0655 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PNK_2045 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PNK_0925 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PNK_0388 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PNK_0900 recR; Recombination protein recR K06187 recR; recombination protein RecR
D PNK_1510 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PNK_1129 cas1; hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D PNK_2193 hypothetical protein K10979 ku; DNA end-binding protein Ku
D PNK_2195 putative ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PNK_2194 hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PNK_0808 gyra3; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PNK_0807 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PNK_0060 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PNK_0694 ihfA; Integration host factor subunit alpha (IHF-alpha) K05788 ihfB; integration host factor subunit beta
D PNK_p0008 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D PNK_p0011 ihfA; Integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta
D PNK_0741 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PNK_2169 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PNK_0589 lexA; putative LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PNK_0400 recX; putative regulatory protein recX K03565 recX; regulatory protein
D PNK_0174 dinG; putative ATP-dependent helicase dinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PNK_2171 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PNK_2170 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pnl03029]
D PNK_1363 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PNK_1483 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PNK_2252 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D PNK_1717 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D PNK_0209 fusA; Elongation factor G K02355 fusA; elongation factor G
D PNK_0693 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PNK_0840 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PNK_1990 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PNK_0240 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PNK_1522 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PNK_1523 gatB; glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PNK_1521 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PNK_p0114 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D PNK_p0128 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D PNK_0775 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PNK_0901 omp85; hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D PNK_2433 dnak7; putative chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0303 dnak1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PNK_1570 hypothetical protein K03687 GRPE; molecular chaperone GrpE
D PNK_0304 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D PNK_0684 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0609 groel1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_2316 groel3; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0685 groes1; Co-chaperonin GroES K04078 groES; chaperonin GroES
D PNK_2315 groes3; Co-chaperonin GroES K04078 groES; chaperonin GroES
D PNK_1898 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D PNK_0158 nifs1; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_1469 nifs3; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_0275 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PNK_0601 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PNK_0668 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PNK_0800 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PNK_2088 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pnl02000]
D PNK_0287 msba1; putative Lipid A export ATP-binding/permease protein MsbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PNK_0288 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PNK_0253 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PNK_p0046 ABC-type transporter, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PNK_0516 putative ABC transporter, ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PNK_1005 tylosin resistance protein K15738 uup; ABC transport system ATP-binding/permease protein
D PNK_2346 ssuA; Putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D PNK_2344 ABC-type transporter, permease subunit K15554 ssuC; sulfonate transport system permease protein
D PNK_2345 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D PNK_1068 potD; putative spermidine/putrescine-binding protein precursor K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PNK_1067 potC; Spermidine/putrescine transport system permease protein K11070 potC; spermidine/putrescine transport system permease protein
D PNK_1066 potB; putative ABC-type spermidine/putrescine transport system, permease subunit I K11071 potB; spermidine/putrescine transport system permease protein
D PNK_1065 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PNK_1731 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PNK_1116 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PNK_1726 putative ABC-type transporter, ATPase subunit K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PNK_0874 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PNK_0876 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PNK_0875 ABC-type transporter, ATPase subunit K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PNK_1911 yaeC; ABC transporter substrate binding protein yaeC K02073 metQ; D-methionine transport system substrate-binding protein
D PNK_1910 metI; D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PNK_1909 metN; Methionine import ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PNK_0883 ABC-type transporter, substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PNK_1132 Conserved hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PNK_0882 ABC-type transporter, permease subunit K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PNK_1133 ABC-type transporter, permease subunit K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PNK_1135 Conserved hypothetical protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PNK_2293 fliY; amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PNK_0298 oppa1; putative periplasmic oligo/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PNK_0297 oppB; ABC-type oligopeptide transporter, permease subunit K15581 oppB; oligopeptide transport system permease protein
D PNK_0296 oppc1; putative ABC-type oligopeptide transporter, permease subunit K15582 oppC; oligopeptide transport system permease protein
D PNK_0295 oppd1; putative ABC-type oligopeptide transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D PNK_0294 oppf1; ATP binding protein, component of oligopeptide permease K10823 oppF; oligopeptide transport system ATP-binding protein
D PNK_2299 oppa3; substrate binding proteins, component of oligopeptide permease, oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PNK_2300 dppB; dipeptide transport system permease, dppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PNK_2301 oppc3; putative ABC-type oligopeptide transporter, permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PNK_0607 putative ABC-type Fe3+-siderophore transporter, permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D PNK_0606 putative ABC-type Fe3+-siderophore transporter, ATPase subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PNK_2154 ABC-type transporter, substrate-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D PNK_2156 ABC-type transporter, permease subunit K09816 znuB; zinc transport system permease protein
D PNK_2155 ABC-type transporter, ATPase subunit K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PNK_0277 putative periplasmic solute binding family protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PNK_0279 ABC-type transporter, permease subunit K11708 troC; manganese/zinc/iron transport system permease protein
D PNK_0280 ABC-type transporter, permease subunit K11709 troD; manganese/zinc/iron transport system permease protein
D PNK_0278 putative ABC-type transporter, ATPase subunit K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PNK_2179 bioY; putative biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D PNK_0181 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D PNK_0182 putative amino acid ABC transporter ATP binding subunit K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PNK_1415 putative permease, YjgP/YjgQ family K07091 lptF; lipopolysaccharide export system permease protein
D PNK_1416 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D PNK_0413 putative ABC-type transporter, ATPase subunit K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PNK_0113 ybhR; putative Inner membrane transport permease YbhR K25180 ybhR; drug efflux transport system permease protein
D PNK_0112 ABC-type transporter, permease subunit K25181 ybhS; drug efflux transport system permease protein
D PNK_0111 ABC-type transporter, ATPase subunit K25182 ybhF; drug efflux transport system ATP-binding protein
D PNK_0110 hlyD; HlyD family secretion protein K25183 ybhG; membrane fusion protein YbhG
D PNK_0971 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PNK_0970 ABC transporter, ATPase subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PNK_0881 Conserved hypothetical protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PNK_0665 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PNK_2275 ABC-type transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PNK_0664 putative ABC transporter, ATPase subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PNK_2276 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PNK_0191 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PNK_0977 putative amino acid permease K14427 SLC12A4_6; solute carrier family 12 (potassium/chloride transporter), member 4/6
D PNK_1186 Conserved hypothetical membrane protein K26939 norM; MATE family, multidrug efflux pump
D PNK_1049 putative multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump
D PNK_0207 hypothetical protein K26939 norM; MATE family, multidrug efflux pump
D PNK_1986 glpT; putative phosphoglycerate transporter, major facilitator superfamily K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D PNK_1059 drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PNK_2264 emrB; Multidrug resistance protein B homolog K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PNK_2232 putative permease, major facilitator superfamily K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PNK_1883 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PNK_0687 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D PNK_1884 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PNK_2051 ptsN; PTS system IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PNK_2052 ptsN2; nitrogen regulatory IIA protein (enzyme IIA-ntr) (phosphotransferase enzyme II, A component) K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D PNK_0489 Glycerol uptake facilitator or related permease K06188 aqpZ; aquaporin Z
D PNK_2281 batA; batA protein K07114 yfbK; Ca-activated chloride channel homolog
D PNK_2282 putative membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D PNK_1444 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PNK_0262 putative small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D PNK_0762 mgte1; Mg2+ transporter K06213 mgtE; magnesium transporter
D PNK_1164 mgte3; putative Mg2+ transporter K06213 mgtE; magnesium transporter
D PNK_1240 mgte5; putative Mg2+ transporter K06213 mgtE; magnesium transporter
D PNK_2100 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D PNK_2101 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D PNK_2210 tolR; putative biopolymer transport protein TolR K03559 exbD; biopolymer transport protein ExbD
D PNK_2209 tolQ; Protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D PNK_0438 magnesium and cobalt transporter family protein K03284 corA; magnesium transporter
D PNK_1219 crcB; crcB Protein K06199 crcB; fluoride exporter
D PNK_0752 conserved putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PNK_0326 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PNK_0828 conserved putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PNK_2411 putative secreted protein K07221 oprO_P; phosphate-selective porin OprO and OprP
D PNK_0475 Conserved hypothetical secreted protein K06076 fadL; long-chain fatty acid transport protein
D PNK_2365 conserved hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D PNK_0425 czcC; cation efflux system membrane protein C K15725 czcC; outer membrane protein, heavy metal efflux system
D PNK_0991 putative outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_1211 outer membrane protein K18903 oprC; outer membrane protein, multidrug efflux system
D PNK_1761 putative outer membrane efflux protein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PNK_0662 putative outer membrane efflux protein, NodT family K18904 nodT; outer membrane protein, multidrug efflux system
D PNK_0184 wza; putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D PNK_0901 omp85; hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D PNK_0879 hypothetical protein K07278 tamA; translocation and assembly module TamA
D PNK_0878 conserved putative membrane protein K09800 tamB; translocation and assembly module TamB
D PNK_0349 hypothetical protein K13285 sipB; invasin B
D PNK_0423 acrb1; multidrug-efflux transport protein K15726 czcA; heavy metal efflux system protein
D PNK_1763 acrb3; multidrug-efflux transporter K18138 acrB; multidrug efflux pump
D PNK_0448 Small Multidrug Resistance protein K03297 emrE; small multidrug resistance pump
D PNK_2103 sugE; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PNK_1079 Proton Antiporter-1 (CPA1) Family protein K24163 nhaK; monovalent cation/hydrogen antiporter
D PNK_0221 putative monovalent cation transporter, sodium/hydrogen exchanger family K26735 KEA4_5_6; K+:H+ antiporter
D PNK_1994 Sodium/hydrogen exchanger-family protein K26735 KEA4_5_6; K+:H+ antiporter
D PNK_1184 kefC; putative glutathione-regulated potassium-efflux system protein K26735 KEA4_5_6; K+:H+ antiporter
D PNK_0092 napA; sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D PNK_2321 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein
D PNK_2322 trkA; potassium uptake system, Trk family K03499 trkA; trk/ktr system potassium uptake protein
D PNK_1725 tyrP_3; aromatic amino acid-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D PNK_0167 tyrp1; putative tyrosine/tryptophan transport protein K03834 tyrP; tyrosine-specific transport protein
D PNK_0557 tyrp3; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D PNK_1309 tyrp5; putative Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D PNK_0329 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D PNK_2362 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D PNK_0392 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D PNK_1053 auxin efflux carrier K24180 mleP; malate permease and related proteins
D PNK_1442 conserved putative membrane protein K09125 yhhQ; queuosine precursor transporter
D PNK_0620 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PNK_1226 hypothetical protein K23242 mntP; manganese efflux pump family protein
D PNK_2213 pal; peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein
D PNK_2211 tolA; tolA protein of Tol-Pal system K03646 tolA; colicin import membrane protein
D PNK_2212 tolB; Protein TolB K03641 tolB; TolB protein
D PNK_1082 PD40 family protein K03641 tolB; TolB protein
D PNK_2263 emrA; Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D PNK_0424 HlyD family secretion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D PNK_1764 acrA; multidrug-efflux transport protein acrA K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1418 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_2019 mdtA; putative multidrug resistance protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D PNK_1838 Conserved hypothetical membrane protein K05770 TSPO; translocator protein
D PNK_1275 hypothetical membrane protein K05770 TSPO; translocator protein
D PNK_2455 mgtC; MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:pnl02044]
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_0097 gspd1; putative general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D PNK_0098 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D PNK_0099 gspF; putative general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D PNK_0009 putative membrane protein K02221 yggT; YggT family protein
D PNK_1888 putative competence protein K02238 comEC; competence protein ComEC
D PNK_0332 gspd3; component D of type II secretion pathway K03219 yscC; type III secretion protein C
D PNK_0206 sctJ; type III secretion lipoprotein SctJ K03222 yscJ; type III secretion protein J
D PNK_0204 sctL; putative type III secretion protein SctL K03223 yscL; type III secretion protein L
D PNK_0337 sctN; type III secretion cytoplasmic ATPase SctN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D PNK_0203 sctR; type III secretion inner membrane protein SctR K03226 yscR; type III secretion protein R
D PNK_0202 sctS; type III secretion inner membrane protein SctS K03227 yscS; type III secretion protein S
D PNK_0201 yscT; type III secretion inner membrane protein SctT K03228 yscT; type III secretion protein T
D PNK_1371 sctU; type III secretion inner membrane protein SctU K03229 yscU; type III secretion protein U
D PNK_1372 sctV; type III secretion pathway protein SctV K03230 yscV; type III secretion protein V
D PNK_0334 sctQ; putative type III secretion translocase SctQ K02417 fliN; flagellar motor switch protein FliN
D PNK_p0145 traG; Type IV conjugative transfer system protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D PNK_p0147 traF; Type IV conjugative transfer system pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D PNK_p0148 traN; Type IV conjugative transfer system mating pair stabilisation protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D PNK_p0150 trbC; Type IV conjugative transfer system pilus assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D PNK_p0149 traU; Type IV conjugative transfer system protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D PNK_p0151 traW; Type IV conjugative transfer system pilus assembly protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D PNK_p0152 traF; Type IV conjugative transfer system signal peptidase TraF K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D PNK_p0153 traC; Type IV conjugative transfer system pilus assembly protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D PNK_p0156 traB; Type IV conjugative transfer system pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D PNK_p0158 traE; Type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D PNK_p0146 traH; Type IV conjugative transfer system pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D PNK_0132 secA; Preprotein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PNK_0271 secDF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D PNK_1715 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D PNK_0958 secG; Protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D PNK_1942 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PNK_1395 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PNK_0566 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PNK_2096 yajC; putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PNK_0800 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PNK_2425 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PNK_2424 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pnl02042]
D PNK_0752 conserved putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PNK_0326 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PNK_0828 conserved putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PNK_0743 Hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pnl02022]
D PNK_0119 phoR; two-component sensor histidine kinase phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PNK_2225 phoB; two-component response regulator phoB K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PNK_2391 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PNK_2349 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PNK_0373 two-component sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3]
D PNK_0374 atoc1; sigma-54 dependent response regulator atoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D PNK_0906 Histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PNK_1238 Conserved hypothetical membrane protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D PNK_1154 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PNK_1152 Conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_1153 putative chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_1537 Chemotaxis protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D PNK_0726 putative two-component response regulator K11443 divK; two-component system, cell cycle response regulator DivK
C 02035 Bacterial motility proteins [BR:pnl02035]
D PNK_1154 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PNK_1156 chew1; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D PNK_1152 Conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_1153 putative chemotaxis response regulator protein-glutamate methylesterase 1 K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PNK_0334 sctQ; putative type III secretion translocase SctQ K02417 fliN; flagellar motor switch protein FliN
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pnl04812]
D PNK_0365 mreB; Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D PNK_2416 hypothetical protein K03496 parA; chromosome partitioning protein
D PNK_p0141 parA; Chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PNK_0064 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pnl04147]
D PNK_2088 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D PNK_0128 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PNK_1936 gapA; glyceraldehyde-3-P dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PNK_0255 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PNK_1620 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PNK_0579 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PNK_2327 ahpC; thiolredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PNK_0684 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_0609 groel1; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_2316 groel3; Chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PNK_2433 dnak7; putative chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D PNK_0303 dnak1; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PNK_1530 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PNK_1717 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D PNK_1734 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PNK_0797 ahcY; S-adenosylhomocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PNK_1550 adk3; putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PNK_0850 adk1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PNK_0515 metC; Cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_0966 metB; cystathionine gamma-synthase/cystathionine beta-lysase family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D PNK_0865 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PNK_0637 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PNK_0086 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PNK_0143 lpdA1; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0792 lpdA2; 2-oxoglutarate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PNK_0976 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PNK_0957 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PNK_0157 pgma1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PNK_1104 blc; outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pnl02048]
D PNK_1129 cas1; hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D PNK_1130 cas2; hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D PNK_1123 cas3; hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PNK_1124 cse1; hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D PNK_1125 cse2; hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D PNK_1126 cas7; hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC
D PNK_1127 cas5; hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D PNK_1128 cas6e; CRISPR-associated protein Cas6e K19126 casE; CRISPR system Cascade subunit CasE
D PNK_p0010 putative addiction module toxin K06218 relE; mRNA interferase RelE/StbE
D PNK_p0119 Plasmid stabilisation system protein K06218 relE; mRNA interferase RelE/StbE
D PNK_1852 conserved hypothetical protein K19159 yefM; antitoxin YefM
D PNK_p0007 doc; Toxin doc K07341 doc; death on curing protein
D PNK_0365 mreB; Actin-like ATPase involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D PNK_0399 gyra1; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PNK_0398 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PNK_0263 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PNK_0158 nifs1; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PNK_1469 nifs3; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:pnl01504]
D PNK_0323 spectinomycin phosphotransferase K18844 aph; spectinomycin phosphotransferase
D PNK_1759 putative acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D PNK_2370 conserved hypothetical protein K18555 qnr; fluoroquinolone resistance protein
D PNK_1764 acrA; multidrug-efflux transport protein acrA K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1418 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D PNK_1763 acrb3; multidrug-efflux transporter K18138 acrB; multidrug efflux pump
D PNK_1761 putative outer membrane efflux protein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PNK_1417 putative outer membrane efflux protein family K12340 tolC; outer membrane protein
D PNK_2020 Conserved hypothetical protein K12340 tolC; outer membrane protein
D PNK_2278 hypothetical protein K12340 tolC; outer membrane protein
D PNK_1211 outer membrane protein K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pnl00537]
D PNK_0579 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pnl03100]
D PNK_1027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PNK_0053 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PNK_1038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PNK_2325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0387 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0407 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0449 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PNK_0676 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PNK_p0115 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PNK_1345 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PNK_0612 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PNK_1578 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PNK_2247 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PNK_0362 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_2254 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_0361 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_0363 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PNK_1889 tRNA-His K14226 tRNA-His; tRNA His
D PNK_1028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PNK_1039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PNK_1934 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_0457 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_0472 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_0389 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_1465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PNK_2246 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PNK_1842 tRNA-Met K14230 tRNA-Met; tRNA Met
D PNK_0984 tRNA-Met K14230 tRNA-Met; tRNA Met
D PNK_0983 tRNA-Met K14230 tRNA-Met; tRNA Met
D PNK_0217 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PNK_0796 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PNK_2428 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PNK_1426 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PNK_2157 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PNK_2162 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PNK_2397 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_p0116 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_1718 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_1336 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PNK_1716 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PNK_1335 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PNK_1485 tRNA-Val K14237 tRNA-Val; tRNA Val
D PNK_1344 tRNA-Val K14237 tRNA-Val; tRNA Val
D PNK_r0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PNK_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PNK_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PNK_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PNK_2069 putative NADP-dependent oxidoreductase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D PNK_0872 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PNK_1194 putative cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D PNK_1072 msrA; peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D PNK_1792 hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PNK_0478 hypothetical protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PNK_0085 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PNK_1106 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PNK_2452 osmC; Osmotically-inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PNK_1007 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PNK_1063 FTMT; Ferritin, mitochondrial Flags: Precursor K02217 ftnA; ferritin [EC:1.16.3.2]
D PNK_0990 copa7; multicopper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D PNK_2095 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PNK_2338 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D PNK_1972 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PNK_1933 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D PNK_2450 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D PNK_2186 Conserved hypothetical membrane protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D PNK_1142 dys; deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PNK_0795 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PNK_0933 apbE; Thiamine biosynthesis lipoprotein apbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PNK_1615 conserved hypothetical membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PNK_2023 conserved hypothetical protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D PNK_1549 hprK; HPr Serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PNK_1885 ptsK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PNK_2244 karG; putative arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D PNK_0922 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PNK_1788 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PNK_0820 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PNK_1602 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PNK_0592 hypothetical protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D PNK_1643 yjcS; hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D PNK_2207 tatD; deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PNK_0959 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PNK_2087 dfrA; endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PNK_0118 MoxR-like ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PNK_0071 YjeF family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PNK_0512 ilvA; threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D PNK_0093 nqrA; putative Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PNK_0429 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PNK_0428 nqrC; putative Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PNK_0427 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PNK_0426 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PNK_2085 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PNK_0960 copa3; putative heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PNK_0422 cada1; putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PNK_2116 Putative magnesium-transporting ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PNK_0159 nifU; putative nitrogen fixation related protein K13819 K13819; NifU-like protein
D PNK_1421 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PNK_0893 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D PNK_0506 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PNK_2089 conserved putative secreted protein K22390 ACP7; acid phosphatase type 7
D PNK_1797 glyoxalase/bleomycin resistance protein/dioxygenase family protein K15975 K15975; glyoxalase family protein
D PNK_1195 DoxX family protein K15977 K15977; putative oxidoreductase
D PNK_1798 Phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D PNK_1011 hypothetical protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PNK_1057 S1 RNA-binding domain-containing protein 1 K06959 tex; protein Tex
C 99974 Translation
D PNK_1810 conserved hypothetical protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D PNK_2245 conserved hypothetical protein K19411 mcsA; protein arginine kinase activator
D PNK_0360 tig; putative trigger factor K03545 tig; trigger factor
D PNK_0924 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D PNK_1877 hypothetical protein K07391 comM; magnesium chelatase family protein
D PNK_0889 hypothetical protein K07403 nfeD; membrane-bound serine protease (ClpP class)
D PNK_0767 lcrH; putative type III secretion chaperone SycD/LcrH K15368 sscA; secretion system chaperone SscA
C 99976 Replication and repair
D PNK_0861 radC; DNA repair protein, RadC family K03630 radC; DNA repair protein RadC
D PNK_1880 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D PNK_1297 hypothetical protein K07461 K07461; putative endonuclease
D PNK_0061 putative Protein smf K04096 smf; DNA processing protein
D PNK_0936 rarA; recombination factor RarA K07478 ycaJ; putative ATPase
D PNK_1246 transposase K07480 insB; insertion element IS1 protein InsB
D PNK_1258 Putative transposase K07480 insB; insertion element IS1 protein InsB
D PNK_1682 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D PNK_p0120 transposase, mutator type K07493 K07493; putative transposase
D PNK_p0099 integrase K07497 K07497; putative transposase
D PNK_p0100 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PNK_1882 putative YbaB family protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PNK_0450 amino acid permease-associated protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PNK_1553 Conserved hypothetical membrane protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D PNK_1799 ntt3; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D PNK_0258 tlca1; ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D PNK_0259 ntt4; ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D PNK_0270 tlca3; ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D PNK_0497 ntt5; putative ADP/ATP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
D PNK_2304 pitA; phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PNK_2178 panF; sodium/pantothenate symporter (pantothenate permease) K03307 TC.SSS; solute:Na+ symporter, SSS family
D PNK_0914 opuE; putative sodium/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PNK_2458 putative sodium/solute simporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PNK_0604 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PNK_1583 agcs3; putative Alanine or Glycine Cation Symporter (AGCS) family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PNK_1638 agcs5; Alanine or Glycine Cation Symporter (AGCS) family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PNK_1639 agcs7; Alanine or Glycine Cation Symporter (AGCS) family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PNK_1439 agcs1; putative Alanine or Glycine Cation Symporter (AGCS) family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PNK_1355 brnq1; putative branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PNK_1356 braB; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PNK_2073 brnq3; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D PNK_0077 conserved hypothetical protein K06320 cgeB; spore maturation protein CgeB
D PNK_1016 spsF; Acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
C 99993 Cell motility
C 99995 Signaling proteins
D PNK_0760 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D PNK_1873 PhoH-like family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D PNK_1368 putative outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D PNK_1078 hypothetical protein K06142 hlpA; outer membrane protein
D PNK_0902 ompH; putative outer membrane protein OmpH K06142 hlpA; outer membrane protein
D PNK_0663 putative HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D PNK_2277 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D PNK_0534 terC; TerC family membrane protein K05794 terC; tellurite resistance protein TerC
D PNK_0627 Conserved hypothetical protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PNK_0177 putative transcription factor K06198 coiA; competence protein CoiA
D PNK_0692 osmY; putative hyperosmotically inducible periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D PNK_2072 csaA; Protein csaA K06878 K06878; tRNA-binding protein
D PNK_1052 Bacterial-like globin K06886 glbN; hemoglobin
D PNK_2024 Conserved hypothetical protein K07001 K07001; NTE family protein
D PNK_2025 Conserved hypothetical membrane protein K07001 K07001; NTE family protein
D PNK_0572 conserved hypothetical protein K07001 K07001; NTE family protein
D PNK_1015 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D PNK_1120 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PNK_1760 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PNK_0190 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PNK_0192 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PNK_1207 rbn; RNase BN, tRNA processing enzyme K07058 K07058; membrane protein
D PNK_0930 conserved hypothetical protein K07100 K07100; putative phosphoribosyl transferase
D PNK_1999 conserved hypothetical protein K07146 K07146; UPF0176 protein
D PNK_1205 LemA family protein K03744 lemA; LemA protein
D PNK_2285 conserved putative membrane protein K00389 yidH; putative membrane protein
D PNK_1506 conserved putative membrane protein K08974 K08974; putative membrane protein
D PNK_0040 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D PNK_1429 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D PNK_0504 HD-domain containing protein K06885 K06885; uncharacterized protein
D PNK_0757 conserved hypothetical protein K06888 K06888; uncharacterized protein
D PNK_1557 putative hydrolase K06889 K06889; uncharacterized protein
D PNK_1932 conserved putative membrane protein K06889 K06889; uncharacterized protein
D PNK_1236 conserved hypothetical protein K06889 K06889; uncharacterized protein
D PNK_0680 conserved hypothetical protein K06889 K06889; uncharacterized protein
D PNK_p0031 Conserved hypothetical protein K06921 K06921; uncharacterized protein
D PNK_1136 hypothetical protein K06940 K06940; uncharacterized protein
D PNK_0602 hypothetical protein K06940 K06940; uncharacterized protein
D PNK_0405 conserved hypothetical protein K06960 K06960; uncharacterized protein
D PNK_2258 putative acylase and diesterase K06978 K06978; uncharacterized protein
D PNK_1494 putative hydrolase K07019 K07019; uncharacterized protein
D PNK_1337 conserved hypothetical protein K07039 K07039; uncharacterized protein
D PNK_1515 hypothetical protein K07071 K07071; uncharacterized protein
D PNK_1765 conserved putative membrane protein K07090 K07090; uncharacterized protein
D PNK_1286 conserved putative membrane protein K07090 K07090; uncharacterized protein
D PNK_0467 yaeI; putative metallophosphoesterase K07098 K07098; uncharacterized protein
D PNK_2291 putative phosphoesterase K07099 K07099; uncharacterized protein
D PNK_2159 SET domain protein K07117 K07117; uncharacterized protein
D PNK_0593 Short-chain dehydrogenase/reductase K07124 K07124; uncharacterized protein
D PNK_p0066 conserved hypothetical protein K07126 K07126; uncharacterized protein
D PNK_p0071 putative secreted protein K07126 K07126; uncharacterized protein
D PNK_p0079 conserved hypothetical protein K07126 K07126; uncharacterized protein
D PNK_p0130 conserved hypothetical protein K07126 K07126; uncharacterized protein
D PNK_1919 conserved hypothetical protein K07164 K07164; uncharacterized protein
D PNK_0371 conserved hypothetical protein K08998 K08998; uncharacterized protein
D PNK_0330 conserved putative secreted protein K08998 K08998; uncharacterized protein
D PNK_0688 conserved hypothetical protein K08999 K08999; uncharacterized protein
D PNK_1819 GatB/Yqey family protein K09117 K09117; uncharacterized protein
D PNK_1090 conserved hypothetical protein K09122 K09122; uncharacterized protein
D PNK_1845 UPF0235 domain-containing protein K09131 K09131; uncharacterized protein
D PNK_1218 conserved hypothetical protein K09137 K09137; uncharacterized protein
D PNK_0012 hypothetical protein K09166 K09166; uncharacterized protein
D PNK_0036 conserved hypothetical protein K09703 K09703; uncharacterized protein
D PNK_2298 hypothetical protein K09792 K09792; uncharacterized protein
D PNK_0042 conserved putative secreted protein K09797 K09797; uncharacterized protein
D PNK_2066 putative periplasmic immunogenic protein K09807 K09807; uncharacterized protein
D PNK_0755 hypothetical protein K09859 K09859; uncharacterized protein
D PNK_2236 conserved hypothetical protein K09930 K09930; uncharacterized protein
D PNK_1298 putative antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D PNK_1795 conserved hypothetical protein K09959 K09959; uncharacterized protein
D PNK_0750 hypothetical protein K09977 K09977; uncharacterized protein
D PNK_1149 hypothetical protein K01163 K01163; uncharacterized protein
D PNK_2305 putative phosphate transport regulator K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024