+E Replication protein KO
#
DNA Replication Proteins - Pseudomonas nitroreducens
%
!
AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D G5B91_12620 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D G5B91_01105 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_07275 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_10865 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_12060 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_17720 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_18125 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_20815 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G5B91_24355 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
D G5B91_35315 DNA-binding protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
B DNA Topoisomerases
#
AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D G5B91_31525 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha
D G5B91_12565 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D G5B91_20500 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D G5B91_34935 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D G5B91_10760 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D G5B91_22670 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D G5B91_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D G5B91_10960 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D G5B91_25690 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D G5B91_29350 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D G5B91_25695 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D G5B91_02965 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D G5B91_03615 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D G5B91_07300 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D G5B91_10830 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D G5B91_20805 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E G5B91_09390 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E G5B91_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E G5B91_33480 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E G5B91_25830 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E G5B91_03995 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E G5B91_21785 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E G5B91_12625 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E G5B91_23945 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E G5B91_20475 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E G5B91_12620 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E G5B91_09385 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E G5B91_01065 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E G5B91_20505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E G5B91_29980 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E G5B91_12620 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E G5B91_09385 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
D G5B91_14010 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D G5B91_24685 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
B DNA Topoisomerases
C G5B91_23505 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C G5B91_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C G5B91_29545 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C G5B91_29560 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C G5B91_18885 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C G5B91_22010 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C G5B91_07280 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C G5B91_20810 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022