+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Panulirus ornatus (ornate spiny lobster)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        139751364 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        139760105 Polr2A; (RefSeq) DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        139756615 Polr2B; (RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        139758376 Polr2C; (RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        139757658 Polr2J; (RefSeq) DNA-directed RNA polymerase II subunit RPB11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        139750990 Polr2D; (RefSeq) DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        139749744 Polr2G; (RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        139763533 Polr2I; (RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        139756073 Polr2M; (RefSeq) uncharacterized protein Polr2M	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        139751254 Polr2E; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        139764071 Polr2F; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        139764847 Polr2H; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        139758975 TfIIA-L; (RefSeq) transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
D      TFIIB
E        139765260 TfIIB; (RefSeq) transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        139747058 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139747141 TATA box-binding protein-like 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139758697 Tbp; (RefSeq) TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139756621 Taf1; (RefSeq) transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        139764539 Taf2; (RefSeq) transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        139758016 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        139750904 uncharacterized protein isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        139766000 Taf5; (RefSeq) transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        139747325 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        139755579 Taf6; (RefSeq) transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        139758439 Taf7; (RefSeq) transcription initiation factor TFIID subunit 7 isoform X1	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        139748372 Taf8; (RefSeq) transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        139761812 Taf9; (RefSeq) transcription initiation factor TFIID subunit 9B	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        139754537 transcription initiation factor TFIID subunit 10-like isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        139753693 Taf11; (RefSeq) uncharacterized protein Taf11 isoform X1	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        139748706 Taf12; (RefSeq) uncharacterized protein Taf12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        139754051 transcription initiation factor TFIID subunit 13-like isoform X1	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        139759561 TfIIEalpha; (RefSeq) general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        139762908 TfIIEbeta; (RefSeq) transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        139758082 general transcription factor IIF subunit 1-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        139766926 TfIIFbeta; (RefSeq) general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        139764518 Tfb1; (RefSeq) general transcription factor IIH subunit 1 isoform X1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        139755300 Ssl1; (RefSeq) general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        139746305 Tfb4; (RefSeq) general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        139765816 mrn; (RefSeq) general transcription factor IIH subunit 4 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        139754046 hay; (RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        139752028 Xpd; (RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        139757603 Cdk7; (RefSeq) cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        139753700 Mat1; (RefSeq) CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        139753856 CycH; (RefSeq) cyclin-H isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        139758985 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        139748708 MED8; (RefSeq) mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        139748180 MED11; (RefSeq) mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        139759458 MED17; (RefSeq) mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        139766389 MED18; (RefSeq) mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        139763931 MED19; (RefSeq) mediator of RNA polymerase II transcription subunit 19	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        139753488 MED20; (RefSeq) mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        139761391 MED22; (RefSeq) mediator of RNA polymerase II transcription subunit 22	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        139749737 MED28; (RefSeq) uncharacterized protein MED28 isoform X1	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        139758402 mediator of RNA polymerase II transcription subunit 29-like	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        139754152 MED30; (RefSeq) mediator of RNA polymerase II transcription subunit 30 isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        139765694 MED1; (RefSeq) uncharacterized protein MED1 isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        139764499 MED4; (RefSeq) mediator of RNA polymerase II transcription subunit 4 isoform X1	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        139752673 MED7; (RefSeq) mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        139758723 MED9; (RefSeq) mediator of RNA polymerase II transcription subunit 9 isoform X1	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        139763465 MED10; (RefSeq) mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        139753666 MED21; (RefSeq) mediator of RNA polymerase II transcription subunit 21 isoform X1	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        139760812 MED31; (RefSeq) mediator of RNA polymerase II transcription subunit 31 isoform X1	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        139765578 MED14; (RefSeq) mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        139752766 uncharacterized protein	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        139763422 MED16; (RefSeq) mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        139757072 Cdk8; (RefSeq) cyclin-dependent kinase 8 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        139760887 CycC; (RefSeq) cyclin-C	K15161 CCNC; cyclin-C 
E        139760017 mediator of RNA polymerase II transcription subunit 12-like protein isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        139750315 skd; (RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        139758797 MED23; (RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        139754035 mediator of RNA polymerase II transcription subunit 24-like isoform X1	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        139749043 mediator of RNA polymerase II transcription subunit 25-like isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        139757300 uncharacterized protein isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        139759527 mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        139760634 mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        139749600 Gcn5; (RefSeq) histone acetyltransferase KAT2A	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        139749031 Nipped-A; (RefSeq) transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        139752138 transcription initiation protein SPT3 homolog isoform X1	K11313 SUPT3H; transcription initiation protein SPT3 
E        139750995 Ada2a; (RefSeq) transcriptional adapter 2-alpha isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        139750682 transcriptional adapter 2B-like isoform X1	K15127 TADA2B; transcriptional adapter 2-beta 
E        139767448 Ada3; (RefSeq) transcriptional adapter 3-B isoform X1	K11315 TADA3; transcriptional adapter 3 
E        139749099 transcriptional adapter 1-like isoform X1	K11317 TADA1; transcriptional adapter 1 
E        139764539 Taf2; (RefSeq) transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        139758016 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        139750904 uncharacterized protein isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        139766000 Taf5; (RefSeq) transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        139747325 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        139755579 Taf6; (RefSeq) transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        139758439 Taf7; (RefSeq) transcription initiation factor TFIID subunit 7 isoform X1	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        139761812 Taf9; (RefSeq) transcription initiation factor TFIID subunit 9B	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        139754537 transcription initiation factor TFIID subunit 10-like isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        139748706 Taf12; (RefSeq) uncharacterized protein Taf12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        139749420 Sgf11; (RefSeq) ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        139765301 Sgf29; (RefSeq) SAGA-associated factor 29 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        139758749 Spt7; (RefSeq) STAGA complex 65 subunit gamma	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        139756994 Chd1; (RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        139747666 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        139761041 not; (RefSeq) ubiquitin carboxyl-terminal hydrolase 22 isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        139765581 Sf3b3; (RefSeq) splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        139745874 brm; (RefSeq) transcription activator BRG1 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        139758305 Snr1; (RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        139755882 mor; (RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        139760886 Bap60; (RefSeq) brahma-associated protein of 60 kDa	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        139758191 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        139746750 actin, clone 403	K05692 ACTB_G1; actin beta/gamma 1 
E        139746751 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139746752 actin-3-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139746825 actin-3-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767072 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767074 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767096 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767170 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767173 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767174 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767175 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767176 actin-3, muscle-specific-like isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        139767178 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767179 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767180 actin, muscle-like isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        139767340 actin-3, muscle-specific-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139767362 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        139760569 Bap55; (RefSeq) actin-like protein 6B isoform X1	K11652 ACTL6B; actin-like protein 6B 
E        139764469 polybromo; (RefSeq) protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        139758305 Snr1; (RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        139766232 Ssb-c31a; (RefSeq) uncharacterized protein Ssb-c31a	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        139749794 cell division cycle and apoptosis regulator protein 1-like isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        139747153 TfIIS; (RefSeq) transcription elongation factor S-II	K03145 TFIIS; transcription elongation factor S-II 
E        139749457 spt4; (RefSeq) transcription elongation factor SPT4-A	K15171 SUPT4H1; transcription elongation factor SPT4 
E        139763497 Spt5; (RefSeq) transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        139763922 Spt6; (RefSeq) transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        139751021 uncharacterized protein isoform X1	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        139765713 Cpsf160; (RefSeq) cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        139766052 Cpsf73; (RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        139762682 Clp; (RefSeq) cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        139749512 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        139751880 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        139761994 uncharacterized protein isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        139752749 Sym; (RefSeq) symplekin isoform X1	K06100 SYMPK; symplekin 
E        139756889 Ssu72; (RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        139763083 Rat1; (RefSeq) 5'-3' exoribonuclease 2 homolog isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        139761689 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        139765461 decapping and exoribonuclease protein-like isoform X1	K14845 RAI1; RAT1-interacting protein 
E        139759451 regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        139749089 uncharacterized protein isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        139749593 hrp65 protein-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        139766657 putative peptidyl-prolyl cis-trans isomerase dodo	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        139750446 atms; (RefSeq) RNA polymerase II-associated factor 1 homolog isoform X1	K15174 PAF1; RNA polymerase II-associated factor 1 
E        139756090 hyx; (RefSeq) parafibromin	K15175 CDC73; parafibromin 
E        139766371 Ctr9; (RefSeq) RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        139759777 Atu; (RefSeq) uncharacterized protein Atu	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        139757861 RNA polymerase-associated protein RTF1 homolog isoform X1	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        139751362 Nelf-A; (RefSeq) negative elongation factor A isoform X1	K15179 WHSC2; negative elongation factor A 
E        139764175 NELF-B; (RefSeq) negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        139764764 TH1; (RefSeq) negative elongation factor D isoform X1	K15181 TH1L; negative elongation factor C/D 
E        139758767 Nelf-E; (RefSeq) negative elongation factor E	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        139766233 Su(Tpl); (RefSeq) RNA polymerase II elongation factor ELL isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        139763649 Eaf; (RefSeq) uncharacterized protein Eaf	K15186 EAF; ELL-associated factor 
E        139748096 CycT; (RefSeq) uncharacterized protein CycT isoform X1	K15188 CCNT; cyclin T 
E        139755458 cyclin-dependent kinase 9-like isoform X1	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
E        139765703 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        139766233 Su(Tpl); (RefSeq) RNA polymerase II elongation factor ELL isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
E        139748096 CycT; (RefSeq) uncharacterized protein CycT isoform X1	K15188 CCNT; cyclin T 
E        139755458 cyclin-dependent kinase 9-like isoform X1	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
E        139765703 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        139757533 uncharacterized protein	K15189 HEXIM1_2; protein HEXIM1/2 
E        139762699 7SK snRNA methylphosphate capping enzyme-like isoform X1	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        139762538 Larp7; (RefSeq) la-related protein 7	K15191 LARP7; La-related protein 7 
E        139748096 CycT; (RefSeq) uncharacterized protein CycT isoform X1	K15188 CCNT; cyclin T 
E        139755458 cyclin-dependent kinase 9-like isoform X1	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
E        139765703 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        139759830 Hel89B; (RefSeq) TATA-binding protein-associated factor 172 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        139766612 NC2beta; (RefSeq) protein Dr1 isoform X1	K21751 DR1; down-regulator of transcription 1 
E        139766104 NC2alpha; (RefSeq) uncharacterized protein NC2alpha isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        139763439 Fcp1; (RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        139758801 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        139759886 uncharacterized protein	K17498 SPN1; transcription factor SPN1 
E        139751214 RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        139754801 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        139761713 RNA polymerase II-associated protein 3-like	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        139746273 CycK; (RefSeq) uncharacterized protein CycK isoform X1	K23326 CCNK; cyclin K 
E        139747966 uncharacterized protein isoform X1	K23326 CCNK; cyclin K 
E        139748471 uncharacterized protein	K23326 CCNK; cyclin K 
E        139762689 uncharacterized protein isoform X1	K23326 CCNK; cyclin K 
E        139757602 GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
E        139767420 GPN-loop GTPase 3-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        139765643 fs(2)ltoPP43; (RefSeq) probable RNA polymerase II nuclear localization protein SLC7A6OS	K28237 SLC7A6OS; RNA polymerase II nuclear localization protein 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        139751342 Polr3A; (RefSeq) DNA-directed RNA polymerase III subunit RPC1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        139756601 Polr3B; (RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        139747720 Polr1C; (RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        139757079 Polr1D; (RefSeq) DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        139754836 Polr3C; (RefSeq) DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        139750803 Polr3D; (RefSeq) DNA-directed RNA polymerase III subunit RPC4 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        139767342 Polr3E; (RefSeq) DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        139752702 Polr3F; (RefSeq) DNA-directed RNA polymerase III subunit RPC6 isoform X1	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        139766381 Polr3G; (RefSeq) uncharacterized protein Polr3G	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        139767482 Polr3H; (RefSeq) DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        139750905 Polr3I; (RefSeq) DNA-directed RNA polymerase III subunit RPC9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        139749481 Polr3K; (RefSeq) DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        139751254 Polr2E; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        139764071 Polr2F; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        139764847 Polr2H; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      TFIIIA
E        139756699 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        139747058 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139747141 TATA box-binding protein-like 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139758697 Tbp; (RefSeq) TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139762372 Brf; (RefSeq) transcription factor IIIB 90 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
D      TFIIIC
E        139767262 general transcription factor 3C polypeptide 1 isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        139762377 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        139765440 general transcription factor 3C polypeptide 4-like	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        139767143 l(2)37Cd; (RefSeq) general transcription factor 3C polypeptide 5 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        139756255 general transcription factor 3C polypeptide 6	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        139767143 l(2)37Cd; (RefSeq) general transcription factor 3C polypeptide 5 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        139762377 general transcription factor 3C polypeptide 3 isoform X1	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        139764306 Pbp49; (RefSeq) snRNA-activating protein complex subunit 3 isoform X1	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        139750405 uncharacterized protein	K20828 ZNF143_76; zinc finger protein 143/76 
E        139766626 Maf1; (RefSeq) repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        139764813 Polr1A; (RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        139755156 Polr1B; (RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        139747720 Polr1C; (RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        139757079 Polr1D; (RefSeq) DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        139758127 Polr1E; (RefSeq) DNA-directed RNA polymerase I subunit RPA49 isoform X1	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        139760154 Polr1H; (RefSeq) DNA-directed RNA polymerase I subunit RPA12 isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        139751254 Polr2E; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        139764071 Polr2F; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        139764847 Polr2H; (RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      SL1/TIF-1B
E        139747058 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139747141 TATA box-binding protein-like 1 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        139758697 Tbp; (RefSeq) TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        139766303 Tif-IA; (RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        139754807 uncharacterized protein isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        139749457 spt4; (RefSeq) transcription elongation factor SPT4-A	K15171 SUPT4H1; transcription elongation factor SPT4 
E        139763497 Spt5; (RefSeq) transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        139756293 chromatin-remodeling complex ATPase chain Iswi-like isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        139765260 TfIIB; (RefSeq) transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        139759561 TfIIEalpha; (RefSeq) general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#<hr>
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#Last updated: April 17, 2025