+D GENES KO
#
KEGG Orthology (KO) - Porphyromonas sp. oral taxon 275
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:porp00010]
D J4862_00110 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D J4862_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_01705 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D J4862_05290 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D J4862_03790 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D J4862_03225 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D J4862_06550 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D J4862_06580 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D J4862_02615 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D J4862_03475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D J4862_00125 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D J4862_03635 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D J4862_03640 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D J4862_03645 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_02745 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D J4862_02750 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D J4862_00930 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D J4862_04000 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:porp00020]
D J4862_04185 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_02745 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D J4862_02750 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D J4862_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D J4862_01225 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D J4862_01215 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D J4862_04465 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D J4862_07965 oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D J4862_03635 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D J4862_03640 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D J4862_03645 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:porp00030]
D J4862_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D J4862_01680 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D J4862_01675 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D J4862_01685 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D J4862_08690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D J4862_03265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D J4862_03260 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D J4862_08630 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D J4862_05035 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D J4862_03790 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D J4862_05290 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_01705 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:porp00040]
D J4862_02685 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D J4862_08690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:porp00051]
D J4862_06565 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D J4862_03335 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D J4862_05070 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D J4862_02290 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D J4862_03415 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D J4862_03410 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_01705 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D J4862_05290 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D J4862_03790 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D J4862_03225 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D J4862_04755 GH32 C-terminal domain-containing protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D J4862_03260 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:porp00052]
D J4862_04000 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D J4862_04010 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D J4862_07020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D J4862_00110 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D J4862_06510 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_07160 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_08215 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D J4862_02685 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:porp00500]
D J4862_00360 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D J4862_05030 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D J4862_06650 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D J4862_04440 glycoside hydrolase family 57 protein K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D J4862_05860 glycoside hydrolase family 97 protein K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D J4862_00110 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D J4862_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D J4862_06565 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:porp00620]
D J4862_02745 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D J4862_02750 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D J4862_03635 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D J4862_03640 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D J4862_03645 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_00930 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D J4862_03600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D J4862_03595 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D J4862_00125 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D J4862_08220 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D J4862_04395 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D J4862_05315 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D J4862_07965 oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D J4862_04465 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:porp00630]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D J4862_05340 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D J4862_00695 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_00700 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_05550 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D J4862_03445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D J4862_03960 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D J4862_02480 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_03145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:porp00640]
D J4862_03600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D J4862_03595 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D J4862_04180 2-oxoisovalerate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_05340 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D J4862_00695 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_00700 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00650 Butanoate metabolism [PATH:porp00650]
D J4862_05315 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D J4862_05320 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D J4862_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D J4862_01225 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D J4862_01215 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D J4862_04170 acetyl-CoA hydrolase/transferase family protein K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D J4862_02745 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D J4862_02750 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D J4862_03225 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:porp00190]
D J4862_06520 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D J4862_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D J4862_01225 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D J4862_01215 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D J4862_03105 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D J4862_03100 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D J4862_02575 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D J4862_02580 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D J4862_02590 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D J4862_02565 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D J4862_02600 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D J4862_03745 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:porp00710]
D J4862_06580 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D J4862_06550 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D J4862_03790 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D J4862_05290 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D J4862_03265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D J4862_03260 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D J4862_03225 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D J4862_08690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:porp00720]
D J4862_07965 oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D J4862_04465 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D J4862_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D J4862_01225 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D J4862_01215 succinate dehydrogenase/fumarate reductase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D J4862_02745 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D J4862_02750 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D J4862_05340 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D J4862_00695 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_00700 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_00890 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D J4862_03560 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D J4862_03595 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D J4862_03600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:porp00680]
D J4862_03445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D J4862_03475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D J4862_03790 class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D J4862_05290 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_03600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D J4862_03595 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D J4862_02615 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D J4862_08305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D J4862_08310 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:porp00910]
D J4862_05235 nrfA; ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D J4862_05240 nrfH; cytochrome c nitrite reductase small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D J4862_00290 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D J4862_02085 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D J4862_05550 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D J4862_04405 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:porp00061]
D J4862_08755 acyl carrier protein K02078 acpP; acyl carrier protein
D J4862_01020 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D J4862_06595 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D J4862_08760 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D J4862_04510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D J4862_01385 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D J4862_03060 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D J4862_02430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_05770 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D J4862_02430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_05770 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D J4862_08755 acyl carrier protein K02078 acpP; acyl carrier protein
D J4862_01020 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
D J4862_00930 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
C 00564 Glycerophospholipid metabolism [PATH:porp00564]
D J4862_03025 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D J4862_00350 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D J4862_00345 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D J4862_03490 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:porp00600]
D J4862_06510 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_07160 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_08215 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_01035 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_03440 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:porp00230]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D J4862_05035 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D J4862_01255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D J4862_04725 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D J4862_08750 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D J4862_07375 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D J4862_01405 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D J4862_03150 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D J4862_04810 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D J4862_01515 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D J4862_08070 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D J4862_08140 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D J4862_04165 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D J4862_07320 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D J4862_00765 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D J4862_05635 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D J4862_01725 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D J4862_06845 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D J4862_03710 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D J4862_02395 dgt; dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D J4862_02315 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D J4862_05295 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D J4862_03750 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D J4862_03325 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D J4862_07030 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D J4862_07315 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D J4862_04710 CYTH domain-containing protein
C 00240 Pyrimidine metabolism [PATH:porp00240]
D J4862_03465 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D J4862_03470 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D J4862_06330 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D J4862_06335 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D J4862_03870 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D J4862_03725 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D J4862_03730 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D J4862_08105 dihydroorotate dehydrogenase-like protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D J4862_03505 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D J4862_01395 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D J4862_02560 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D J4862_06380 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D J4862_01265 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D J4862_04420 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D J4862_02755 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D J4862_08140 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D J4862_01415 nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D J4862_02940 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D J4862_07030 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D J4862_03740 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D J4862_03710 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D J4862_04160 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D J4862_03160 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D J4862_02790 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D J4862_05695 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:porp00250]
D J4862_07195 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D J4862_03510 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D J4862_06795 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D J4862_03325 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D J4862_01515 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D J4862_06330 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D J4862_06335 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D J4862_04405 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D J4862_02085 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D J4862_05550 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D J4862_03465 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D J4862_03470 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D J4862_01255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:porp00260]
D J4862_04090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D J4862_08780 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D J4862_03445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D J4862_02615 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D J4862_08305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D J4862_08310 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D J4862_02910 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D J4862_03960 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D J4862_02480 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_03145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D J4862_00350 CDP-alcohol phosphatidyltransferase family protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:porp00270]
D J4862_02800 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D J4862_02400 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D J4862_04565 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D J4862_07955 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D J4862_04090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D J4862_08780 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D J4862_05510 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D J4862_03605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D J4862_03170 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D J4862_08305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D J4862_08310 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:porp00280]
D J4862_03605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D J4862_04180 2-oxoisovalerate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_05340 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D J4862_00695 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_00700 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:porp00290]
D J4862_03605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:porp00300]
D J4862_04090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D J4862_08780 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D J4862_02270 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D J4862_02820 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D J4862_06610 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D J4862_05485 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D J4862_01425 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D J4862_01200 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:porp00310]
D J4862_04185 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:porp00220]
D J4862_05550 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D J4862_03465 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D J4862_03470 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D J4862_02085 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
C 00330 Arginine and proline metabolism [PATH:porp00330]
D J4862_08280 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D J4862_04530 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D J4862_04535 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D J4862_02245 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D J4862_03720 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D J4862_04185 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:porp00400]
D J4862_00130 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D J4862_04485 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D J4862_05925 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II K04516 AROA1; chorismate mutase [EC:5.4.99.5]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:porp00410]
D J4862_04550 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D J4862_08785 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:porp00430]
D J4862_03595 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D J4862_03600 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:porp00450]
D J4862_04590 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D J4862_06790 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D J4862_07025 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:porp00460]
D J4862_07195 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D J4862_03445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:porp00470]
D J4862_01200 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D J4862_03830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D J4862_03280 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D J4862_06645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:porp00480]
D J4862_01015 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D J4862_02680 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D J4862_01685 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D J4862_01680 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:porp00520]
D J4862_06490 AGE family epimerase/isomerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8]
D J4862_02690 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D J4862_03855 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D J4862_08235 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D J4862_01035 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_03440 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_06385 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D J4862_06625 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D J4862_06565 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D J4862_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D J4862_03335 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D J4862_00110 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D J4862_02685 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D J4862_04010 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D J4862_07020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D J4862_05070 glmM; phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D J4862_02290 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D J4862_02025 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:porp00541]
D J4862_00100 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D J4862_00755 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D J4862_06375 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D J4862_03765 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D J4862_06485 dihydrodipicolinate synthase family protein K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D J4862_02690 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D J4862_02725 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D J4862_02685 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D J4862_02025 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D J4862_02040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D J4862_02030 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D J4862_02035 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D J4862_02290 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D J4862_03415 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D J4862_03410 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:porp00511]
D J4862_06510 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_07160 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_08215 DUF4981 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D J4862_01035 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_03440 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_00295 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D J4862_03080 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D J4862_07550 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:porp00540]
D J4862_01380 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D J4862_01385 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D J4862_01390 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D J4862_07915 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D J4862_08145 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D J4862_06200 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D J4862_04045 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:porp00550]
D J4862_03855 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D J4862_08235 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D J4862_07080 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D J4862_06645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D J4862_05485 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D J4862_03830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D J4862_01425 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D J4862_01200 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D J4862_00635 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D J4862_02990 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D J4862_05490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D J4862_06635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D J4862_05465 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D J4862_08045 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D J4862_08050 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:porp00552]
D J4862_02990 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:porp00543]
D J4862_02695 WecB/TagA/CpsF family glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D J4862_02920 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D J4862_02700 acyltransferase K25912 pssR; exopolysaccharide acyltransferase PssR
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:porp00730]
D J4862_06805 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D J4862_06820 thiH; 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D J4862_05680 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D J4862_06815 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D J4862_06195 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D J4862_02550 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D J4862_07315 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:porp00740]
D J4862_00770 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D J4862_06415 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D J4862_02610 HAD family phosphatase K21063 K21063; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D J4862_00025 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D J4862_04785 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D J4862_07975 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:porp00750]
D J4862_01240 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D J4862_00210 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D J4862_08310 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D J4862_08205 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:porp00760]
D J4862_04520 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D J4862_04165 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D J4862_08140 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D J4862_03190 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:porp00770]
D J4862_01720 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D J4862_08785 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D J4862_03980 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D J4862_04210 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D J4862_03605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D J4862_04550 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:porp00780]
D J4862_08760 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D J4862_04510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D J4862_03060 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D J4862_06735 DUF452 family protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D J4862_08660 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
C 00785 Lipoic acid metabolism [PATH:porp00785]
D J4862_04770 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_03635 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D J4862_03640 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D J4862_03645 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D J4862_04185 2-oxo acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D J4862_04180 2-oxoisovalerate dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D J4862_03960 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D J4862_02480 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D J4862_03145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:porp00790]
D J4862_03235 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D J4862_04620 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D J4862_02975 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D J4862_04145 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D J4862_05690 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D J4862_03320 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D J4862_00770 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D J4862_06440 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D J4862_04735 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D J4862_00885 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D J4862_01470 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D J4862_07060 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:porp00670]
D J4862_05690 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D J4862_00890 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D J4862_03560 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D J4862_03445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D J4862_08750 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D J4862_08070 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D J4862_02480 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D J4862_05695 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D J4862_02800 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D J4862_03960 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_03145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:porp00860]
D J4862_04040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D J4862_00960 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D J4862_07265 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D J4862_04675 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D J4862_06905 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D J4862_03990 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D J4862_04670 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D J4862_05150 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D J4862_04065 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D J4862_03310 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D J4862_07495 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D J4862_05595 cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D J4862_07205 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D J4862_04635 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D J4862_04070 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D J4862_01570 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D J4862_06855 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D J4862_01575 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D J4862_06850 alpha-ribazole phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D J4862_04640 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:porp00130]
D J4862_00220 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D J4862_04095 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:porp00900]
D J4862_05680 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D J4862_01325 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D J4862_00265 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D J4862_07500 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D J4862_03005 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D J4862_03155 ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D J4862_04415 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D J4862_01085 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D J4862_06320 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D J4862_00635 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D J4862_03265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:porp00523]
D J4862_02025 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D J4862_02040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D J4862_02030 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D J4862_02035 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D J4862_02040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:porp00261]
D J4862_04090 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D J4862_08780 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D J4862_02270 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D J4862_02820 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:porp00521]
D J4862_00110 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D J4862_03615 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D J4862_02025 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D J4862_02040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D J4862_02030 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D J4862_02035 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D J4862_00110 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:porp00525]
D J4862_02025 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D J4862_02040 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D J4862_01020 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D J4862_04510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D J4862_03060 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D J4862_08755 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D J4862_02800 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D J4862_05315 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D J4862_05320 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D J4862_03880 YjjG family noncanonical pyrimidine nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D J4862_03880 YjjG family noncanonical pyrimidine nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:porp03020]
D J4862_07785 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D J4862_07780 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D J4862_07650 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:porp03010]
D J4862_04060 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D J4862_02445 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D J4862_07420 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D J4862_07655 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D J4862_07700 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D J4862_07000 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D J4862_07465 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D J4862_07715 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D J4862_02440 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D J4862_07455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D J4862_07660 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D J4862_07470 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D J4862_07665 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D J4862_07385 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D J4862_00035 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D J4862_06150 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D J4862_07405 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D J4862_06995 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D J4862_07430 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D J4862_08000 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D J4862_00705 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D J4862_07800 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D J4862_07435 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D J4862_07450 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D J4862_07445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D J4862_07390 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D J4862_07710 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D J4862_07790 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D J4862_06990 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D J4862_07795 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D J4862_07805 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D J4862_02435 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D J4862_07400 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D J4862_07690 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D J4862_07415 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D J4862_07645 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D J4862_07705 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D J4862_06965 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D J4862_06365 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D J4862_07225 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D J4862_07425 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D J4862_07440 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D J4862_07395 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D J4862_05780 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D J4862_07220 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D J4862_07360 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D J4862_07410 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D J4862_07695 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D J4862_00790 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D J4862_06600 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D J4862_07355 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D J4862_08185 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D J4862_06360 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D J4862_07670 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D J4862_05520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_06865 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_07615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_01660 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_06950 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_07520 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_01665 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_06945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_07515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:porp00970]
D J4862_07605 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D J4862_07725 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D J4862_00140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_00145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_02520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_03090 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_04390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_01095 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D J4862_01090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D J4862_08015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D J4862_00105 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D J4862_08255 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D J4862_08325 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D J4862_07995 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D J4862_08005 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D J4862_00015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_03180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_05455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_05660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_06770 tRNA-His K14226 tRNA-His; tRNA His
D J4862_07610 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D J4862_00875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_03095 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_05200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_07505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_07510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_00040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D J4862_00045 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D J4862_08635 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D J4862_02475 tRNA-Met K14230 tRNA-Met; tRNA Met
D J4862_02860 tRNA-Met K14230 tRNA-Met; tRNA Met
D J4862_04625 tRNA-Ile K14230 tRNA-Met; tRNA Met
D J4862_07070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D J4862_02305 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D J4862_05840 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D J4862_08010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D J4862_02115 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_04820 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_07075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_08020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_08345 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_00480 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D J4862_02620 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D J4862_07830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D J4862_07820 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D J4862_00020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D J4862_00780 tRNA-Val K14237 tRNA-Val; tRNA Val
D J4862_00785 tRNA-Val K14237 tRNA-Val; tRNA Val
D J4862_08330 tRNA-Val K14237 tRNA-Val; tRNA Val
D J4862_04040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D J4862_00310 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D J4862_02055 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D J4862_06535 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D J4862_03140 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D J4862_08130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D J4862_06350 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D J4862_07215 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D J4862_06290 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D J4862_07025 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D J4862_04460 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D J4862_01175 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D J4862_02875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D J4862_04015 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D J4862_03020 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D J4862_02020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D J4862_07065 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D J4862_05685 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D J4862_03545 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D J4862_03835 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D J4862_02070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D J4862_08160 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:porp03060]
D J4862_07685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D J4862_07815 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D J4862_06970 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D J4862_05345 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D J4862_02890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D J4862_01260 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D J4862_00505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D J4862_04555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D J4862_03705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D J4862_08555 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D J4862_02825 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D J4862_04025 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D J4862_00255 S24/S26 family peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:porp04122]
D J4862_06410 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D J4862_06800 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:porp03018]
D J4862_03475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D J4862_03900 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D J4862_08720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D J4862_00095 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D J4862_00870 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D J4862_05815 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D J4862_03085 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D J4862_00325 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_00050 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D J4862_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D J4862_03745 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D J4862_07960 HD domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:porp03030]
D J4862_03975 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D J4862_06670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D J4862_01650 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D J4862_04200 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D J4862_03770 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D J4862_00185 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D J4862_04585 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D J4862_00840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D J4862_03930 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:porp03410]
D J4862_03540 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D J4862_06780 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D J4862_08195 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D J4862_01465 xth; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D J4862_00840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D J4862_00865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D J4862_03930 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:porp03420]
D J4862_01565 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D J4862_01210 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D J4862_03125 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D J4862_06695 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D J4862_05055 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D J4862_01480 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D J4862_00840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D J4862_03930 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:porp03430]
D J4862_07120 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D J4862_06345 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2
D J4862_01480 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D J4862_02295 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D J4862_00865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D J4862_06670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D J4862_01650 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D J4862_03975 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D J4862_03930 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:porp03440]
D J4862_00865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D J4862_00590 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D J4862_03920 recR; recombination protein RecR K06187 recR; recombination protein RecR
D J4862_06840 recA; recombinase RecA K03553 recA; recombination protein RecA
D J4862_00840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D J4862_02960 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D J4862_04125 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D J4862_00490 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D J4862_00270 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D J4862_06670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D J4862_01650 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D J4862_03975 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
D J4862_04775 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:porp02010]
D J4862_06500 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D J4862_06275 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D J4862_06270 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D J4862_07530 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D J4862_04690 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D J4862_03240 ABC transporter permease K09808 lolC_E_F; lipoprotein-releasing system permease protein
D J4862_07275 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D J4862_05410 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D J4862_03065 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D J4862_04085 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D J4862_05525 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:porp03070]
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
D J4862_05345 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D J4862_07815 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D J4862_06970 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D J4862_07685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D J4862_02890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D J4862_01260 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D J4862_00505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D J4862_03705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D J4862_04555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:porp02020]
D J4862_08580 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D J4862_08590 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D J4862_05550 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D J4862_07210 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D J4862_03105 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D J4862_03100 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
D J4862_07545 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D J4862_02690 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D J4862_02725 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome [PATH:porp04142]
D J4862_03080 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D J4862_07550 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D J4862_01035 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_03440 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_00295 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 04146 Peroxisome [PATH:porp04146]
D J4862_02430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_05770 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_01530 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
D J4862_04705 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:porp02024]
D J4862_02430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_05770 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_06415 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D J4862_05800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D J4862_01260 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D J4862_05345 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D J4862_07815 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D J4862_06970 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D J4862_07685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D J4862_02890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D J4862_00505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D J4862_03705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D J4862_04555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:porp02040]
D J4862_04435 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
D J4862_08640 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D J4862_07210 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D J4862_03475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:porp04981]
D J4862_05690 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D J4862_03445 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D J4862_05695 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 04980 Cobalamin transport and metabolism [PATH:porp04980]
D J4862_07205 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D J4862_03905 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D J4862_00695 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D J4862_00700 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D J4862_04110 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:porp01501]
D J4862_03555 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D J4862_00570 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_05790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_00565 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_05795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_05800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
D J4862_05465 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D J4862_08050 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:porp01502]
D J4862_03830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D J4862_01200 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D J4862_01425 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D J4862_05490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D J4862_06635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:porp01503]
D J4862_00570 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_05790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_00565 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_05795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
D J4862_01380 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:porp01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:porp01009]
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:porp01002]
D J4862_04025 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D J4862_04110 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D J4862_01725 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D J4862_01255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D J4862_08620 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D J4862_03785 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D J4862_03295 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D J4862_00725 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D J4862_01330 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D J4862_01015 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D J4862_02680 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D J4862_07680 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D J4862_05420 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D J4862_06465 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D J4862_05300 peptidase M49 K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D J4862_01320 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D J4862_04775 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D J4862_02840 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D J4862_04730 S9 family peptidase K18574 ptpA; Xaa-Xaa-Pro tripeptidyl-peptidase [EC:3.4.14.12]
D J4862_05805 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D J4862_03210 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D J4862_02825 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D J4862_00255 S24/S26 family peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D J4862_02415 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D J4862_04155 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D J4862_06255 PD40 domain-containing protein K08676 tri; tricorn protease [EC:3.4.21.-]
D J4862_06370 PD40 domain-containing protein K08676 tri; tricorn protease [EC:3.4.21.-]
D J4862_02585 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D J4862_05905 rhomboid family intramembrane serine protease K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D J4862_08655 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D J4862_02935 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
C 01003 Glycosyltransferases [BR:porp01003]
D J4862_04580 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D J4862_00360 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D J4862_05465 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D J4862_08045 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D J4862_02695 WecB/TagA/CpsF family glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:porp01005]
D J4862_01380 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D J4862_08145 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D J4862_01385 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D J4862_01390 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D J4862_07915 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D J4862_06200 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D J4862_04045 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D J4862_00755 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D J4862_03765 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D J4862_06375 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D J4862_00100 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D J4862_03040 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:porp01011]
D J4862_03855 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D J4862_08235 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D J4862_07080 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D J4862_06645 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D J4862_05485 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D J4862_01200 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D J4862_03830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D J4862_03280 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D J4862_05490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D J4862_06635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D J4862_02990 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D J4862_05465 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D J4862_08050 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D J4862_08045 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
C 01004 Lipid biosynthesis proteins [BR:porp01004]
D J4862_01020 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D J4862_06595 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D J4862_08760 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D J4862_04510 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D J4862_01385 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D J4862_03060 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D J4862_02430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_05770 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:porp01006]
D J4862_01085 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D J4862_06320 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D J4862_00635 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D J4862_00760 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D J4862_06545 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D J4862_04095 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:porp01007]
D J4862_04040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D J4862_00310 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D J4862_02070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D J4862_08160 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D J4862_06290 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D J4862_02020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D J4862_07025 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D J4862_04015 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D J4862_01175 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D J4862_02875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D J4862_03020 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D J4862_06535 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D J4862_03140 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D J4862_05685 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D J4862_08130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D J4862_07215 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D J4862_07065 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D J4862_06350 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D J4862_02055 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D J4862_03545 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D J4862_03835 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D J4862_02910 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D J4862_08660 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D J4862_00960 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D J4862_03605 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D J4862_08310 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:porp03000]
D J4862_07955 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D J4862_04660 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D J4862_02300 Lrp/AsnC ligand binding domain-containing protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D J4862_02255 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D J4862_02490 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 03021 Transcription machinery [BR:porp03021]
D J4862_07650 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D J4862_07785 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D J4862_07780 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D J4862_04435 RNA polymerase sigma factor RpoD/SigA K03086 rpoD; RNA polymerase primary sigma factor
D J4862_08640 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D J4862_03055 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D J4862_05535 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D J4862_07210 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D J4862_02380 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D J4862_07810 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D J4862_03350 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D J4862_03085 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:porp03019]
D J4862_03915 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D J4862_00325 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D J4862_08720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D J4862_00095 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D J4862_00870 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D J4862_05815 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D J4862_03475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D J4862_03900 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D J4862_03085 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D J4862_08200 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D J4862_00050 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D J4862_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D J4862_03745 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 03041 Spliceosome
C 03011 Ribosome [BR:porp03011]
D J4862_04060 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D J4862_02445 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D J4862_07420 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D J4862_07655 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D J4862_07700 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D J4862_07000 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D J4862_07465 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D J4862_07715 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D J4862_02440 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D J4862_07455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D J4862_07660 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D J4862_07470 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D J4862_07665 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D J4862_07385 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D J4862_00035 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D J4862_06150 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D J4862_07405 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D J4862_06995 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D J4862_07430 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D J4862_08000 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D J4862_00705 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D J4862_07800 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D J4862_07435 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D J4862_07450 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D J4862_07445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D J4862_07390 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D J4862_07710 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D J4862_06990 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D J4862_07795 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D J4862_07805 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D J4862_07790 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D J4862_02435 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D J4862_07400 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D J4862_07690 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D J4862_07415 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D J4862_07645 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D J4862_07705 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D J4862_06965 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D J4862_06365 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D J4862_07225 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D J4862_07425 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D J4862_07440 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D J4862_07395 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D J4862_07220 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D J4862_07360 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D J4862_07410 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D J4862_07695 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D J4862_00790 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D J4862_06600 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D J4862_07355 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D J4862_08185 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D J4862_06360 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D J4862_07670 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D J4862_05780 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D J4862_01665 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_06945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_07515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_05520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_06865 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_07615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_01660 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_06950 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_07520 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:porp03009]
D J4862_06590 era; GTPase Era K03595 era; GTPase
D J4862_07310 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D J4862_02380 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D J4862_07810 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D J4862_01005 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D J4862_07970 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D J4862_07595 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D J4862_05470 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D J4862_01355 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D J4862_01540 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D J4862_05145 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D J4862_08170 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D J4862_02945 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D J4862_00175 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D J4862_00585 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D J4862_05065 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D J4862_03135 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D J4862_06175 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D J4862_06260 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D J4862_03700 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D J4862_00955 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D J4862_03915 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D J4862_01370 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D J4862_00095 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D J4862_02550 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D J4862_06585 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D J4862_07560 hflX; GTPase HflX K03665 hflX; GTPase
D J4862_06190 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D J4862_02315 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D J4862_05295 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D J4862_02075 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D J4862_02375 rimP; ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D J4862_00055 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D J4862_00610 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:porp03016]
D J4862_01315 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D J4862_07960 HD domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D J4862_04040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D J4862_07065 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D J4862_04015 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D J4862_02875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D J4862_07025 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D J4862_00310 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D J4862_02020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D J4862_03020 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D J4862_06535 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D J4862_02055 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D J4862_03140 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D J4862_08130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D J4862_06350 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D J4862_07215 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D J4862_06290 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D J4862_01175 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D J4862_05685 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D J4862_03545 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D J4862_03835 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D J4862_02070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D J4862_08160 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D J4862_03345 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D J4862_01620 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D J4862_03760 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D J4862_02985 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D J4862_06190 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D J4862_00760 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D J4862_06545 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D J4862_05935 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D J4862_00615 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D J4862_01630 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D J4862_07045 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D J4862_07295 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D J4862_08100 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D J4862_00545 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D J4862_06680 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D J4862_01550 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D J4862_05650 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D J4862_06410 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D J4862_02980 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D J4862_07540 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D J4862_01470 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D J4862_04735 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D J4862_00885 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D J4862_07060 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D J4862_03115 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D J4862_05415 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D J4862_01460 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D J4862_06460 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D J4862_02795 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D J4862_07280 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D J4862_08720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D J4862_03900 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:porp03012]
D J4862_04215 translation initiation factor K03113 EIF1; translation initiation factor 1
D J4862_02385 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D J4862_06355 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D J4862_01610 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D J4862_03340 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D J4862_02450 elongation factor Ts K02357 tsf; elongation factor Ts
D J4862_07825 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D J4862_07460 fusA; elongation factor G K02355 fusA; elongation factor G
D J4862_01400 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D J4862_02555 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D J4862_06720 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D J4862_07675 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D J4862_06480 efp; elongation factor P K02356 efp; elongation factor P
D J4862_02665 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D J4862_03365 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:porp03110]
D J4862_01125 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D J4862_05810 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D J4862_00050 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D J4862_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D J4862_01700 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D J4862_01695 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D J4862_07940 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D J4862_01170 co-chaperone GroES K04078 groES; chaperonin GroES
D J4862_06465 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D J4862_01035 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_03440 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D J4862_02845 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D J4862_05820 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D J4862_06665 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:porp04131]
D J4862_08555 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D J4862_06550 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D J4862_02615 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D J4862_00125 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:porp03051]
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:porp03032]
D J4862_00185 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D J4862_07955 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D J4862_03795 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D J4862_03910 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D J4862_04200 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D J4862_03770 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D J4862_06670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D J4862_03975 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D J4862_01650 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D J4862_04585 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D J4862_00840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D J4862_03930 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D J4862_05050 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D J4862_01595 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D J4862_07235 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D J4862_04540 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D J4862_03755 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D J4862_05460 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:porp03036]
D J4862_07955 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D J4862_03795 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D J4862_03910 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D J4862_06725 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D J4862_04085 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D J4862_06285 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D J4862_07095 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D J4862_00570 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_05790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_08065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D J4862_08045 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D J4862_02485 ParA family protein K03496 parA; chromosome partitioning protein
D J4862_02490 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D J4862_07235 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D J4862_04540 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D J4862_00615 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D J4862_07595 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D J4862_01235 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D J4862_00135 tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D J4862_01625 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D J4862_07015 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:porp03400]
D J4862_02045 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D J4862_06780 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D J4862_08195 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D J4862_03540 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D J4862_03160 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D J4862_01465 xth; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D J4862_00865 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D J4862_03930 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D J4862_00840 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D J4862_01210 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D J4862_03125 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D J4862_06695 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D J4862_05055 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D J4862_01480 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D J4862_07785 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D J4862_07780 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D J4862_07650 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D J4862_01565 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D J4862_07120 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D J4862_06345 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2
D J4862_02295 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D J4862_06670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D J4862_03975 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D J4862_01650 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D J4862_06840 recA; recombinase RecA K03553 recA; recombination protein RecA
D J4862_02960 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D J4862_04125 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D J4862_00490 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D J4862_00970 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D J4862_00590 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D J4862_00270 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D J4862_03920 recR; recombination protein RecR K06187 recR; recombination protein RecR
D J4862_03985 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D J4862_02810 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D J4862_05050 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D J4862_01595 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D J4862_03755 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D J4862_03795 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D J4862_03910 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D J4862_00870 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D J4862_05815 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D J4862_02470 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D J4862_03710 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:porp03029]
D J4862_02385 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D J4862_06355 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D J4862_02450 elongation factor Ts K02357 tsf; elongation factor Ts
D J4862_07825 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D J4862_07460 fusA; elongation factor G K02355 fusA; elongation factor G
D J4862_06590 era; GTPase Era K03595 era; GTPase
D J4862_02070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D J4862_02875 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D J4862_06535 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D J4862_08130 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D J4862_02020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D J4862_06000 toprim domain-containing protein K17680 PEO1; twinkle protein [EC:5.6.2.3]
D J4862_00630 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D J4862_00050 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D J4862_01695 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D J4862_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D J4862_01170 co-chaperone GroES K04078 groES; chaperonin GroES
D J4862_01700 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D J4862_01625 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D J4862_01260 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:porp02000]
D J4862_05525 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D J4862_05085 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D J4862_03530 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D J4862_06500 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D J4862_06275 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D J4862_06270 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D J4862_00420 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D J4862_00425 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D J4862_07530 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D J4862_04690 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D J4862_05410 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D J4862_03065 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D J4862_03240 ABC transporter permease K09808 lolC_E_F; lipoprotein-releasing system permease protein
D J4862_07275 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D J4862_04085 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D J4862_05885 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D J4862_03455 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D J4862_04505 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D J4862_00335 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D J4862_05205 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D J4862_06705 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D J4862_07250 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D J4862_07345 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D J4862_00370 MFS transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease
D J4862_03555 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D J4862_03675 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D J4862_06235 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D J4862_06700 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D J4862_05740 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D J4862_08605 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D J4862_08610 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D J4862_08650 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D J4862_01420 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D J4862_05110 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D J4862_06890 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family
D J4862_02515 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D J4862_04100 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D J4862_00905 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D J4862_05195 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
D J4862_05800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D J4862_00630 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D J4862_01500 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D J4862_00825 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D J4862_08590 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D J4862_00565 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_05795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_02320 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D J4862_08265 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D J4862_07255 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D J4862_05025 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D J4862_05670 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D J4862_05675 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D J4862_00740 uracil-xanthine permease K02824 uraA; uracil permease
D J4862_00730 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D J4862_06185 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D J4862_03285 chromate transporter K07240 chrA; chromate transporter
D J4862_03290 chromate transporter K07240 chrA; chromate transporter
D J4862_07300 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D J4862_08555 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D J4862_08540 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D J4862_03185 MarC family protein K05595 marC; multiple antibiotic resistance protein
D J4862_00650 energy transducer TonB K03832 tonB; periplasmic protein TonB
D J4862_05775 energy transducer TonB K03832 tonB; periplasmic protein TonB
D J4862_05315 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D J4862_05335 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D J4862_05320 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D J4862_08580 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D J4862_00570 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_05790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_00935 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D J4862_05850 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D J4862_06400 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D J4862_08730 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D J4862_02330 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D J4862_04425 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:porp02044]
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
D J4862_04160 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D J4862_00505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D J4862_05345 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D J4862_07815 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D J4862_06970 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D J4862_07685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D J4862_04555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D J4862_03705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D J4862_02890 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D J4862_01260 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:porp02042]
D J4862_05110 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D J4862_06890 gldE; gliding motility-associated protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:porp04812]
D J4862_08065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D J4862_07095 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D J4862_02485 ParA family protein K03496 parA; chromosome partitioning protein
D J4862_02490 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:porp04147]
D J4862_04455 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D J4862_03475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D J4862_06550 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D J4862_06580 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D J4862_00125 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D J4862_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D J4862_00050 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D J4862_03845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D J4862_04775 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D J4862_00765 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D J4862_07825 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D J4862_03345 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D J4862_02430 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_05770 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D J4862_07315 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D J4862_03080 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D J4862_07550 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D J4862_04010 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D J4862_05030 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D J4862_05550 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D J4862_07265 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D J4862_08305 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D J4862_08070 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D J4862_03650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_04190 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D J4862_01680 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D J4862_03225 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D J4862_02615 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:porp02048]
D J4862_02810 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D J4862_02815 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D J4862_07835 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D J4862_07855 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D J4862_07955 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D J4862_07095 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D J4862_08065 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D J4862_07235 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D J4862_04540 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D J4862_04040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:porp04090]
D J4862_04775 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:porp01504]
D J4862_00570 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_05790 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D J4862_00565 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_05795 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D J4862_05800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D J4862_00575 TolC family protein K12340 tolC; outer membrane protein
D J4862_05875 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:porp03100]
D J4862_07605 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D J4862_07725 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D J4862_00140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_00145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_02520 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_03090 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_04390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D J4862_01095 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D J4862_01090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D J4862_08015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D J4862_00105 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D J4862_08255 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D J4862_08325 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D J4862_07995 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D J4862_08005 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D J4862_00015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_03180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_05455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_05660 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D J4862_06770 tRNA-His K14226 tRNA-His; tRNA His
D J4862_07610 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D J4862_00875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_03095 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_05200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_07505 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_07510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D J4862_00040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D J4862_00045 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D J4862_08635 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D J4862_02475 tRNA-Met K14230 tRNA-Met; tRNA Met
D J4862_02860 tRNA-Met K14230 tRNA-Met; tRNA Met
D J4862_04625 tRNA-Ile K14230 tRNA-Met; tRNA Met
D J4862_07070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D J4862_02305 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D J4862_05840 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D J4862_08010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D J4862_02115 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_04820 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_07075 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_08020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_08345 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D J4862_00480 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D J4862_02620 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D J4862_07830 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D J4862_07820 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D J4862_00020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D J4862_00780 tRNA-Val K14237 tRNA-Val; tRNA Val
D J4862_00785 tRNA-Val K14237 tRNA-Val; tRNA Val
D J4862_08330 tRNA-Val K14237 tRNA-Val; tRNA Val
D J4862_05520 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_06865 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_07615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D J4862_01660 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_06950 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_07520 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D J4862_01665 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_06945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_07515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D J4862_08745 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D J4862_01630 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D J4862_02310 anaerobic sulfatase-maturation protein K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7]
D J4862_06750 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D J4862_02630 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D J4862_06835 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D J4862_01280 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D J4862_01300 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D J4862_06745 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D J4862_02090 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D J4862_08550 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D J4862_00495 DUF4105 domain-containing protein K27956 lnb; lipoprotein N-acyltransferase [EC:2.3.1.-]
D J4862_03550 glycoside hydrolase family 130 protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D J4862_06615 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D J4862_03380 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D J4862_05620 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D J4862_07125 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D J4862_01080 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D J4862_01365 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D J4862_08155 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D J4862_03690 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D J4862_01775 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D J4862_01770 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D J4862_01765 Fe-S cluster domain-containing protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D J4862_00975 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D J4862_00980 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D J4862_00985 nqrC; NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D J4862_00990 nqrD; NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D J4862_00995 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D J4862_01000 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D J4862_07005 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D J4862_00510 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D J4862_00515 lactate utilization protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D J4862_00520 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D J4862_01780 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D J4862_01785 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D J4862_01790 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D J4862_04175 flavodoxin K03839 fldA; flavodoxin I
D J4862_05285 flavodoxin K03839 fldA; flavodoxin I
D J4862_00395 FAD-dependent oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D J4862_02420 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D J4862_05405 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D J4862_05610 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D J4862_01190 YraN family protein K07460 yraN; putative endonuclease
D J4862_00535 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D J4862_05175 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
C 99978 Cell growth
D J4862_06570 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
C 99993 Cell motility
C 99995 Signaling proteins
D J4862_00275 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D J4862_04805 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D J4862_00625 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D J4862_05880 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
C 99994 Others
D J4862_03075 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D J4862_05720 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D J4862_00330 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D J4862_01065 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D J4862_02065 LemA family protein K03744 lemA; LemA protein
D J4862_01690 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D J4862_08125 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D J4862_05560 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D J4862_07040 HD domain-containing protein K06950 K06950; uncharacterized protein
D J4862_04815 VOC family protein K07032 K07032; uncharacterized protein
D J4862_03890 ATP-binding protein K07133 K07133; uncharacterized protein
D J4862_00300 FAD-dependent monooxygenase K07137 K07137; uncharacterized protein
D J4862_01585 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D J4862_03810 hypothetical protein K07164 K07164; uncharacterized protein
D J4862_06915 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D J4862_02280 PAS domain-containing protein K09155 K09155; uncharacterized protein
D J4862_06445 hypothetical protein K00243 K00243; uncharacterized protein
D J4862_06755 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2025