+D GENES KO
#
KEGG Orthology (KO) - Polynucleobacter paludilacus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ppal00010]
D AOC06_05695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AOC06_02550 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AOC06_07525 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AOC06_05545 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AOC06_01190 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AOC06_07535 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AOC06_08120 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AOC06_04545 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AOC06_07530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AOC06_03070 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AOC06_03785 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AOC06_03790 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_05815 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_08760 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:ppal00020]
D AOC06_04240 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AOC06_04570 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AOC06_01980 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AOC06_04980 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AOC06_04975 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AOC06_07585 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AOC06_04225 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AOC06_04230 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AOC06_04215 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AOC06_04220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AOC06_05820 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AOC06_04205 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AOC06_08760 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AOC06_03785 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AOC06_03790 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ppal00030]
D AOC06_05695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AOC06_00785 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AOC06_01185 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AOC06_03695 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AOC06_03700 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_07980 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AOC06_06415 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AOC06_07820 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AOC06_07525 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AOC06_02550 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:ppal00040]
D AOC06_06545 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AOC06_07085 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AOC06_00785 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ppal00051]
D AOC06_01580 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_01585 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AOC06_01590 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AOC06_02550 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AOC06_07525 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AOC06_05545 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AOC06_08145 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:ppal00052]
D AOC06_01600 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AOC06_07085 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
D AOC06_06545 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:ppal00500]
D AOC06_07085 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AOC06_01705 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_05695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppal00520]
D AOC06_06280 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AOC06_08315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AOC06_05350 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AOC06_08320 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AOC06_07780 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D AOC06_06610 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D AOC06_07725 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D AOC06_07730 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D AOC06_00560 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AOC06_01510 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AOC06_05940 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AOC06_06175 glycosyltransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D AOC06_06190 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D AOC06_01360 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_07085 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AOC06_06545 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AOC06_01600 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AOC06_08145 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AOC06_05695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AOC06_01580 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AOC06_01585 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AOC06_01590 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AOC06_01705 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D AOC06_01695 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D AOC06_07120 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:ppal00620]
D AOC06_05815 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AOC06_03785 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AOC06_03790 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_07530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AOC06_04880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AOC06_01100 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AOC06_01095 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AOC06_04295 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AOC06_03255 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D AOC06_04385 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AOC06_04705 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AOC06_05405 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AOC06_00135 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AOC06_06415 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AOC06_01170 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AOC06_04205 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AOC06_05820 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AOC06_08760 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D AOC06_03070 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AOC06_03620 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_05570 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppal00630]
D AOC06_02770 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D AOC06_05815 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AOC06_03620 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D AOC06_04205 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AOC06_04240 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AOC06_04570 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_04655 3-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AOC06_04710 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D AOC06_04715 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D AOC06_04725 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AOC06_07365 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D AOC06_07370 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D AOC06_07375 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D AOC06_06415 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AOC06_06380 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AOC06_01455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_00130 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D AOC06_04475 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D AOC06_04465 glxR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D AOC06_07820 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AOC06_05435 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AOC06_03450 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AOC06_05750 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AOC06_05755 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D AOC06_05870 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AOC06_02430 oxc; oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8]
C 00640 Propanoate metabolism [PATH:ppal00640]
D AOC06_05815 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AOC06_05395 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_08300 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AOC06_01100 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AOC06_01095 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AOC06_04295 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AOC06_02375 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D AOC06_04710 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D AOC06_04715 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D AOC06_04725 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AOC06_07585 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AOC06_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AOC06_05450 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AOC06_04570 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:ppal00650]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_04180 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04660 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D AOC06_02795 polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D AOC06_04655 3-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AOC06_05435 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AOC06_03450 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AOC06_04225 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AOC06_04230 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AOC06_04215 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AOC06_04220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AOC06_01370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AOC06_05065 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AOC06_05060 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AOC06_03220 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D AOC06_05595 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AOC06_05590 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ppal00660]
D AOC06_05595 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AOC06_05590 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AOC06_07585 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AOC06_07580 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AOC06_04245 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AOC06_04255 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AOC06_04260 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ppal00562]
D AOC06_04910 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AOC06_05450 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AOC06_05545 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ppal00190]
D AOC06_05530 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AOC06_05525 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AOC06_05520 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D AOC06_05515 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D AOC06_05510 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AOC06_05505 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AOC06_05500 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D AOC06_05495 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AOC06_05490 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AOC06_05485 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AOC06_05480 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AOC06_05475 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D AOC06_05470 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D AOC06_05465 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AOC06_02040 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AOC06_04225 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AOC06_04230 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AOC06_04215 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AOC06_04220 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AOC06_00650 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AOC06_00655 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AOC06_00660 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AOC06_08035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AOC06_08060 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D AOC06_08075 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D AOC06_08080 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AOC06_08070 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D AOC06_08040 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AOC06_06975 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AOC06_06970 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AOC06_06865 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AOC06_06860 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AOC06_00175 cytochrome c, class I K08738 CYC; cytochrome c
D AOC06_00100 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AOC06_00110 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AOC06_00105 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AOC06_00095 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AOC06_00115 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AOC06_00080 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AOC06_00090 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AOC06_00085 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AOC06_02630 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AOC06_05115 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AOC06_05240 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ppal00680]
D AOC06_05750 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AOC06_05755 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D AOC06_01455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AOC06_07820 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AOC06_04545 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AOC06_04205 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AOC06_07525 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AOC06_02550 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AOC06_05815 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AOC06_03070 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AOC06_08120 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AOC06_06590 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AOC06_04635 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ppal00910]
D AOC06_00505 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AOC06_00510 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AOC06_08510 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ppal00920]
D AOC06_02845 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AOC06_02850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AOC06_02855 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AOC06_02150 molybdopterin-dependent oxidoreductase K05301 sorA; sulfite dehydrogenase (cytochrome) subunit A [EC:1.8.2.1]
D AOC06_05875 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D AOC06_06910 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D AOC06_06905 soxX; sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D AOC06_05885 SoxY-related AACIE arm protein K17226 soxY; sulfur-oxidizing protein SoxY
D AOC06_06920 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D AOC06_05880 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D AOC06_06915 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D AOC06_06900 soxB; thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D AOC06_06930 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D AOC06_06925 c-type cytochrome K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D AOC06_01850 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D AOC06_06940 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D AOC06_06110 FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D AOC06_07040 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AOC06_04920 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AOC06_08415 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AOC06_04320 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ppal00061]
D AOC06_04880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AOC06_01100 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AOC06_01095 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AOC06_04295 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AOC06_06330 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D AOC06_06340 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AOC06_06345 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AOC06_06325 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AOC06_06335 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_01120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_03040 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AOC06_06075 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AOC06_04825 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ppal00071]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04825 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:ppal00121]
D AOC06_07615 choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ppal00561]
D AOC06_07820 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AOC06_06350 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AOC06_01535 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AOC06_07700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AOC06_05260 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AOC06_05255 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:ppal00564]
D AOC06_08100 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AOC06_01535 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AOC06_07700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AOC06_05260 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AOC06_03010 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AOC06_05575 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AOC06_05580 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D AOC06_01160 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D AOC06_03210 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AOC06_06260 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ppal01040]
D AOC06_07155 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ppal00230]
D AOC06_05460 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_07980 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AOC06_04315 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AOC06_02320 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AOC06_07165 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AOC06_04580 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D AOC06_07265 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AOC06_07510 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AOC06_07515 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AOC06_07520 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AOC06_07435 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AOC06_07755 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AOC06_07880 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AOC06_03530 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AOC06_07220 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AOC06_04665 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AOC06_03110 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AOC06_03560 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AOC06_05675 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AOC06_03115 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AOC06_05660 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AOC06_01070 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AOC06_01075 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AOC06_05650 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AOC06_05270 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AOC06_05050 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D AOC06_03615 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AOC06_01085 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D AOC06_01470 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AOC06_01250 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D AOC06_02845 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AOC06_02850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ppal00240]
D AOC06_05385 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AOC06_05390 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AOC06_01275 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AOC06_07815 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AOC06_04140 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AOC06_08395 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AOC06_01145 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AOC06_02995 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AOC06_03560 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AOC06_02295 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AOC06_04555 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AOC06_06565 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AOC06_07880 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AOC06_03530 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AOC06_07220 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AOC06_01270 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AOC06_02475 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D AOC06_01070 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AOC06_01075 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AOC06_04430 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AOC06_07190 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AOC06_06430 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AOC06_02000 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppal00250]
D AOC06_05735 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AOC06_06155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AOC06_02535 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D AOC06_07225 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AOC06_02485 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AOC06_03615 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AOC06_07435 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AOC06_01275 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AOC06_01370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AOC06_00505 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AOC06_00510 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AOC06_05385 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AOC06_05390 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AOC06_08315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AOC06_04315 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ppal00260]
D AOC06_04870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AOC06_04265 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AOC06_06150 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AOC06_07065 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D AOC06_06145 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AOC06_01455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AOC06_06415 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AOC06_07820 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AOC06_08120 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AOC06_06590 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AOC06_04635 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AOC06_02000 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_00130 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D AOC06_05575 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AOC06_07875 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AOC06_04290 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AOC06_04285 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ppal00270]
D AOC06_04920 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AOC06_08275 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_08280 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_08375 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AOC06_04575 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AOC06_04665 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AOC06_02800 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AOC06_08370 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AOC06_04870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AOC06_04265 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AOC06_06150 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AOC06_08415 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AOC06_04320 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D AOC06_07540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AOC06_08155 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AOC06_08150 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AOC06_07040 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AOC06_04205 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AOC06_06525 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D AOC06_06590 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ppal00280]
D AOC06_07540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04710 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D AOC06_04715 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D AOC06_04725 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AOC06_05450 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AOC06_02395 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D AOC06_05065 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AOC06_05060 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppal00290]
D AOC06_07875 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AOC06_04245 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AOC06_04255 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AOC06_04260 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AOC06_05595 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AOC06_05590 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AOC06_05585 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AOC06_02605 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AOC06_07540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AOC06_06155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AOC06_05570 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ppal00300]
D AOC06_06150 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AOC06_04870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AOC06_04265 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AOC06_04945 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AOC06_01205 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AOC06_02955 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AOC06_07125 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AOC06_02950 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AOC06_08390 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AOC06_00465 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AOC06_00855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AOC06_00860 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ppal00310]
D AOC06_04975 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_01370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AOC06_04760 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
C 00220 Arginine biosynthesis [PATH:ppal00220]
D AOC06_07230 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AOC06_07225 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AOC06_02485 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AOC06_05385 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AOC06_05390 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AOC06_06155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AOC06_03710 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AOC06_00940 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AOC06_08425 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AOC06_07790 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AOC06_07125 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ppal00330]
D AOC06_02480 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D AOC06_04575 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AOC06_07385 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AOC06_01035 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AOC06_01225 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:ppal00340]
D AOC06_00565 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AOC06_03610 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D AOC06_00605 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D AOC06_00600 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D AOC06_00590 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AOC06_00585 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AOC06_00595 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AOC06_00580 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AOC06_06580 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00575 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00570 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:ppal00350]
D AOC06_06580 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00575 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_02800 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AOC06_01370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ppal00360]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04180 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AOC06_06580 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00575 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_02800 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00380 Tryptophan metabolism [PATH:ppal00380]
D AOC06_04975 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppal00400]
D AOC06_07355 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AOC06_00475 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AOC06_01105 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AOC06_01135 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AOC06_00480 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AOC06_06570 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AOC06_05080 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AOC06_00780 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AOC06_00775 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AOC06_00770 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AOC06_04280 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AOC06_00765 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AOC06_04290 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AOC06_04285 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AOC06_06585 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D AOC06_06575 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AOC06_06580 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00575 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_02800 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ppal00410]
D AOC06_02695 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AOC06_02450 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_02375 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D AOC06_05450 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ppal00430]
D AOC06_07630 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AOC06_02535 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ppal00450]
D AOC06_08275 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_08280 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_06425 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AOC06_02640 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AOC06_02845 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AOC06_02850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AOC06_02030 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AOC06_02465 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ppal00460]
D AOC06_07630 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AOC06_01455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ppal00470]
D AOC06_04680 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AOC06_00890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AOC06_05825 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AOC06_00870 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AOC06_08390 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AOC06_00465 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ppal00480]
D AOC06_07630 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AOC06_08155 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AOC06_08150 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AOC06_02360 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AOC06_02545 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AOC06_07440 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AOC06_02070 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AOC06_01980 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AOC06_08230 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D AOC06_00910 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D AOC06_04575 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ppal00540]
D AOC06_03045 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AOC06_00915 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AOC06_03035 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AOC06_04905 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AOC06_03050 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AOC06_01485 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AOC06_07910 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AOC06_04550 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AOC06_07915 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AOC06_01475 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AOC06_07430 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AOC06_08385 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AOC06_08380 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AOC06_08500 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D AOC06_00165 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AOC06_01760 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AOC06_06540 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D AOC06_07695 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AOC06_08225 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D AOC06_06535 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AOC06_01770 dehydrogenase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D AOC06_01340 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AOC06_07550 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppal00541]
D AOC06_07085 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AOC06_01600 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AOC06_06545 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AOC06_01330 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AOC06_01320 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AOC06_01335 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AOC06_01325 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D AOC06_01705 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D AOC06_01695 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D AOC06_07120 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D AOC06_01580 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AOC06_01585 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AOC06_01590 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AOC06_08320 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AOC06_05940 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:ppal00550]
D AOC06_00560 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AOC06_01510 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AOC06_00885 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AOC06_00870 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AOC06_00855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AOC06_00890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AOC06_00860 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AOC06_03005 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AOC06_01350 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AOC06_00865 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AOC06_00880 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AOC06_01140 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AOC06_00495 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AOC06_08480 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AOC06_00850 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AOC06_07500 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ppal00552]
D AOC06_01350 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ppal00543]
D AOC06_04920 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ppal00730]
D AOC06_04775 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D AOC06_04800 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AOC06_02815 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AOC06_04780 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D AOC06_07020 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AOC06_04790 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AOC06_04795 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AOC06_01165 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AOC06_06460 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AOC06_05150 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AOC06_01470 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ppal00740]
D AOC06_01385 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AOC06_01410 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AOC06_01380 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AOC06_01415 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AOC06_07170 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AOC06_05460 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ppal00750]
D AOC06_02520 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AOC06_06590 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AOC06_07710 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AOC06_06290 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D AOC06_06145 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ppal00760]
D AOC06_05735 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AOC06_05715 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AOC06_05720 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AOC06_07880 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AOC06_03530 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AOC06_02310 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AOC06_02625 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D AOC06_01155 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AOC06_07325 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AOC06_07450 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AOC06_07455 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AOC06_07460 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AOC06_01370 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ppal00770]
D AOC06_05595 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AOC06_05590 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AOC06_05585 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AOC06_02605 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AOC06_07295 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AOC06_01000 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AOC06_02450 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AOC06_07185 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AOC06_08000 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AOC06_00960 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AOC06_06285 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AOC06_07540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AOC06_02695 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ppal00780]
D AOC06_06325 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AOC06_06335 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_01120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_03040 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AOC06_06075 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AOC06_00815 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AOC06_00820 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AOC06_00810 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AOC06_00825 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
C 00785 Lipoic acid metabolism [PATH:ppal00785]
D AOC06_08190 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AOC06_08185 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_03785 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AOC06_03790 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AOC06_04980 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AOC06_04975 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AOC06_00130 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ppal00790]
D AOC06_01545 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AOC06_07015 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D AOC06_05150 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AOC06_07830 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D AOC06_08330 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AOC06_07290 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AOC06_05355 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AOC06_06435 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AOC06_04300 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AOC06_01385 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AOC06_04160 chorismate-binding protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D AOC06_03135 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AOC06_02010 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AOC06_03130 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AOC06_01420 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AOC06_07885 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AOC06_06395 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AOC06_07565 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AOC06_06130 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AOC06_06445 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AOC06_06140 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AOC06_06405 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AOC06_06400 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ppal00670]
D AOC06_06435 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AOC06_03770 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AOC06_01455 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AOC06_07165 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AOC06_07755 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AOC06_06180 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AOC06_08740 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AOC06_08275 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_08280 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_06430 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AOC06_05870 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AOC06_08365 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ppal00860]
D AOC06_04530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOC06_00730 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AOC06_01245 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AOC06_00450 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AOC06_02490 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AOC06_00120 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AOC06_02315 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D AOC06_01230 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D AOC06_07315 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AOC06_01840 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AOC06_08035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AOC06_08040 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AOC06_01835 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AOC06_07360 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AOC06_06465 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppal00130]
D AOC06_07390 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AOC06_00750 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D AOC06_06605 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D AOC06_07740 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D AOC06_07860 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AOC06_00830 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D AOC06_05095 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ppal00900]
D AOC06_07020 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AOC06_03015 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AOC06_04625 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D AOC06_07970 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AOC06_04620 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D AOC06_03570 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AOC06_07130 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_07025 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AOC06_01015 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AOC06_03005 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AOC06_06455 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ppal00906]
D AOC06_00990 squalene/phytoene synthase family protein K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ppal00907]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AOC06_01185 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ppal00523]
D AOC06_01330 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AOC06_01320 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AOC06_01335 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AOC06_01325 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D AOC06_01320 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D AOC06_05855 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:ppal00332]
D AOC06_01035 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AOC06_01225 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ppal00261]
D AOC06_02845 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AOC06_02850 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AOC06_04870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AOC06_04265 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AOC06_04945 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AOC06_01205 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ppal00521]
D AOC06_05710 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AOC06_04910 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AOC06_01330 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AOC06_01320 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AOC06_01335 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AOC06_01325 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:ppal00525]
D AOC06_01330 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AOC06_01320 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ppal00401]
D AOC06_06575 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AOC06_06580 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00575 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_02800 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AOC06_00780 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AOC06_00775 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AOC06_06340 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AOC06_06335 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_01120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_06075 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AOC06_06330 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppal00999]
D AOC06_08375 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AOC06_01135 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ppal00362]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_04180 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ppal00627]
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AOC06_03745 glnA; type I glutamate--ammonia ligase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:ppal00364]
D AOC06_07050 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AOC06_03640 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
D AOC06_06840 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D AOC06_02035 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ppal00361]
D AOC06_07050 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AOC06_03640 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AOC06_06840 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D AOC06_02035 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:ppal00623]
D AOC06_07050 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AOC06_03640 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:ppal00633]
D AOC06_03230 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D AOC06_00800 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ppal03020]
D AOC06_00265 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AOC06_00270 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AOC06_00430 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AOC06_05655 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ppal03010]
D AOC06_06560 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AOC06_02985 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AOC06_00330 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AOC06_00425 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AOC06_00385 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AOC06_06230 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AOC06_00280 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AOC06_00370 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AOC06_07795 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AOC06_00295 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AOC06_00420 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AOC06_00275 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AOC06_00415 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AOC06_00365 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AOC06_05560 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AOC06_06490 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AOC06_00345 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AOC06_06220 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AOC06_00320 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AOC06_07240 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AOC06_07005 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AOC06_00250 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AOC06_00315 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AOC06_00300 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AOC06_00305 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AOC06_00360 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AOC06_00375 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AOC06_00260 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AOC06_06215 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AOC06_00255 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AOC06_00245 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AOC06_07800 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AOC06_00350 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AOC06_00395 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AOC06_00335 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AOC06_00435 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AOC06_00380 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AOC06_06475 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AOC06_05025 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AOC06_01020 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AOC06_00325 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AOC06_00310 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AOC06_00355 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AOC06_07985 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AOC06_01025 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AOC06_07145 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AOC06_00340 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AOC06_00390 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AOC06_03415 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AOC06_06355 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AOC06_07150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AOC06_08785 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AOC06_05030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AOC06_00410 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AOC06_00185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AOC06_00200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AOC06_00205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppal00970]
D AOC06_04525 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AOC06_00195 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AOC06_05640 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AOC06_04765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AOC06_04515 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AOC06_07975 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AOC06_04520 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AOC06_06255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AOC06_00190 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AOC06_05535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_03680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_04615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_02330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_02220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AOC06_02925 tRNA-Met K14230 tRNA-Met; tRNA Met
D AOC06_06985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D AOC06_07605 tRNA-Met K14230 tRNA-Met; tRNA Met
D AOC06_08710 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AOC06_01010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AOC06_05000 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AOC06_05235 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AOC06_05690 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AOC06_02660 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AOC06_00220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AOC06_00230 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AOC06_04590 tRNA-Val K14237 tRNA-Val; tRNA Val
D AOC06_05045 tRNA-Val K14237 tRNA-Val; tRNA Val
D AOC06_04530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOC06_08455 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AOC06_08450 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AOC06_08460 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AOC06_07110 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AOC06_07095 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AOC06_07835 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AOC06_07685 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AOC06_07690 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AOC06_05040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AOC06_02655 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AOC06_04890 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AOC06_02465 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOC06_06180 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AOC06_08740 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AOC06_07080 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AOC06_01210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AOC06_07175 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOC06_02880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AOC06_08265 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AOC06_01050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AOC06_03575 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AOC06_05020 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AOC06_05015 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AOC06_07775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AOC06_04955 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ppal03060]
D AOC06_00400 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AOC06_00235 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AOC06_05540 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AOC06_07420 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AOC06_07425 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AOC06_07415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AOC06_08770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AOC06_00925 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AOC06_08105 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AOC06_01055 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AOC06_03490 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AOC06_08020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AOC06_00615 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AOC06_00620 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AOC06_00625 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AOC06_06310 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AOC06_07180 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ppal04122]
D AOC06_02815 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AOC06_07040 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AOC06_07090 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AOC06_07445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AOC06_06130 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AOC06_06395 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AOC06_06135 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D AOC06_08130 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AOC06_07565 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AOC06_06445 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AOC06_04785 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:ppal03018]
D AOC06_01045 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AOC06_06390 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D AOC06_04545 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AOC06_05555 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AOC06_02255 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AOC06_03685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AOC06_03420 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AOC06_07305 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AOC06_07475 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AOC06_03595 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AOC06_05115 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AOC06_05240 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AOC06_07285 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ppal03030]
D AOC06_05430 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02165 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AOC06_03495 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AOC06_01220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AOC06_02365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AOC06_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AOC06_06995 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AOC06_07890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AOC06_05415 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AOC06_03055 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AOC06_07055 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AOC06_02970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ppal03410]
D AOC06_02785 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AOC06_00735 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AOC06_07955 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AOC06_07960 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AOC06_04885 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AOC06_08400 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AOC06_03760 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AOC06_07055 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AOC06_02890 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AOC06_02970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ppal03420]
D AOC06_04630 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AOC06_07900 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AOC06_02805 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AOC06_06265 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AOC06_07075 exodeoxyribonuclease V subunit gamma K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AOC06_07055 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AOC06_02970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ppal03430]
D AOC06_07075 exodeoxyribonuclease V subunit gamma K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AOC06_01500 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AOC06_07030 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AOC06_02890 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AOC06_07890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AOC06_02265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AOC06_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AOC06_03495 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AOC06_01220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AOC06_05430 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02165 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AOC06_02970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ppal03440]
D AOC06_02890 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AOC06_07890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AOC06_06295 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AOC06_03505 recR; recombination protein RecR K06187 recR; recombination protein RecR
D AOC06_07595 recA; recombinase RecA K03553 recA; recombination protein RecA
D AOC06_07055 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AOC06_07765 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AOC06_07770 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AOC06_07760 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AOC06_07400 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AOC06_02265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AOC06_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AOC06_03495 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AOC06_01220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AOC06_05430 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02165 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AOC06_00125 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AOC06_06225 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ppal03250]
D AOC06_04165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ppal02010]
D AOC06_03340 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D AOC06_03195 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D AOC06_05780 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AOC06_04330 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AOC06_00535 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D AOC06_00525 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AOC06_05625 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AOC06_00520 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AOC06_05635 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AOC06_00540 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AOC06_05630 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AOC06_00515 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AOC06_02675 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_02680 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_05345 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_05340 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AOC06_05335 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D AOC06_05330 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AOC06_00040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AOC06_01920 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AOC06_00045 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AOC06_01925 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AOC06_00050 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AOC06_01930 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AOC06_00030 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AOC06_00035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AOC06_01935 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AOC06_06070 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AOC06_06065 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D AOC06_06060 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AOC06_06055 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D AOC06_02900 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D AOC06_02905 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AOC06_06765 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D AOC06_06770 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C
D AOC06_06775 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AOC06_06780 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AOC06_02355 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AOC06_02350 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AOC06_07930 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AOC06_02285 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AOC06_07825 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
C 02060 Phosphotransferase system (PTS) [PATH:ppal02060]
D AOC06_08135 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AOC06_08140 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D AOC06_08145 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AOC06_07940 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ppal03070]
D AOC06_07420 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AOC06_07425 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AOC06_00235 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AOC06_05540 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AOC06_00400 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AOC06_07415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AOC06_08770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AOC06_00925 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AOC06_08020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AOC06_08105 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AOC06_01055 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AOC06_00615 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AOC06_00620 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AOC06_00625 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ppal02020]
D AOC06_05315 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AOC06_05320 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AOC06_05150 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AOC06_02675 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_02680 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_05345 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_06320 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AOC06_04105 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AOC06_04110 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AOC06_04045 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AOC06_04040 flagellar motor protein K02556 motA; chemotaxis protein MotA
D AOC06_04080 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AOC06_07105 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AOC06_07100 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AOC06_03445 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AOC06_08040 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AOC06_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AOC06_07490 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D AOC06_00145 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D AOC06_02975 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D AOC06_02620 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D AOC06_03750 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AOC06_03755 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AOC06_08725 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AOC06_08720 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_08530 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D AOC06_07570 pilin K02650 pilA; type IV pilus assembly protein PilA
D AOC06_00650 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AOC06_00655 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AOC06_00660 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AOC06_00175 cytochrome c, class I K08738 CYC; cytochrome c
D AOC06_06975 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AOC06_06970 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AOC06_06865 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AOC06_06860 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AOC06_05940 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AOC06_00650 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ppal02024]
D AOC06_03595 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AOC06_00780 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AOC06_00775 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AOC06_07355 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AOC06_04105 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AOC06_04110 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AOC06_00040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AOC06_01920 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AOC06_00045 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AOC06_01925 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AOC06_00050 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AOC06_01930 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AOC06_00030 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AOC06_00035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AOC06_01935 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AOC06_04825 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AOC06_01410 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AOC06_08770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AOC06_00235 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AOC06_05540 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AOC06_00400 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AOC06_07415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AOC06_00925 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AOC06_08020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AOC06_08105 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AOC06_01055 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ppal02030]
D AOC06_03880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AOC06_03920 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AOC06_03925 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AOC06_04040 flagellar motor protein K02556 motA; chemotaxis protein MotA
D AOC06_04080 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AOC06_04075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ppal02040]
D AOC06_03870 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AOC06_03875 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AOC06_03880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AOC06_03890 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AOC06_03920 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AOC06_03925 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AOC06_03935 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AOC06_03940 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AOC06_03945 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AOC06_04060 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AOC06_04065 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AOC06_03990 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AOC06_03995 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AOC06_04000 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D AOC06_04010 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AOC06_04015 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AOC06_04025 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AOC06_04030 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AOC06_04040 flagellar motor protein K02556 motA; chemotaxis protein MotA
D AOC06_04080 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AOC06_04075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AOC06_06990 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AOC06_04105 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AOC06_04110 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AOC06_04045 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AOC06_04545 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ppal04980]
D AOC06_07360 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AOC06_04720 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D AOC06_04725 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AOC06_08275 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AOC06_08280 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ppal01501]
D AOC06_08405 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AOC06_06280 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AOC06_04855 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AOC06_04850 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AOC06_00495 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AOC06_08480 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AOC06_00850 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ppal01502]
D AOC06_00890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AOC06_04680 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AOC06_00860 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AOC06_00865 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AOC06_00880 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppal01503]
D AOC06_06175 glycosyltransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D AOC06_06190 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D AOC06_02225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AOC06_06320 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AOC06_08255 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AOC06_04165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AOC06_04855 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AOC06_04850 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AOC06_03045 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ppal01000]
C 01001 Protein kinases [BR:ppal01001]
D AOC06_08525 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AOC06_05315 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AOC06_03750 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AOC06_08725 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ppal01009]
D AOC06_08370 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AOC06_04635 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ppal01002]
D AOC06_07180 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AOC06_00965 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AOC06_03115 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AOC06_04315 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AOC06_00505 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AOC06_08315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AOC06_07615 choloylglycine hydrolase family protein K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D AOC06_08610 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D AOC06_02545 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AOC06_03765 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D AOC06_08010 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AOC06_08015 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D AOC06_02360 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AOC06_02950 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AOC06_02980 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AOC06_07735 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AOC06_06455 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AOC06_07560 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D AOC06_06320 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AOC06_00640 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D AOC06_04130 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AOC06_07500 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AOC06_04605 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AOC06_04595 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AOC06_06240 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AOC06_03465 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D AOC06_06310 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AOC06_08125 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AOC06_05855 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D AOC06_06375 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D AOC06_03145 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D AOC06_07630 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AOC06_06440 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D AOC06_07350 tldD; metalloprotease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:ppal01003]
D AOC06_05255 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D AOC06_01310 hypothetical protein K00737 MGAT3; beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144]
D AOC06_01140 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AOC06_00495 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppal01005]
D AOC06_03045 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AOC06_03050 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AOC06_00915 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AOC06_03035 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AOC06_04905 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AOC06_01485 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AOC06_08385 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AOC06_08380 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AOC06_08500 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D AOC06_07430 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AOC06_04550 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AOC06_01475 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AOC06_07915 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AOC06_07910 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AOC06_06540 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D AOC06_08225 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D AOC06_01340 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AOC06_07550 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AOC06_00165 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AOC06_01760 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AOC06_07695 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AOC06_06535 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AOC06_01775 NAD-dependent epimerase/dehydratase family protein K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppal01011]
D AOC06_00560 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AOC06_01510 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AOC06_00885 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AOC06_00870 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AOC06_00855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AOC06_00890 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AOC06_04680 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AOC06_05825 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AOC06_03145 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D AOC06_00865 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AOC06_00880 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AOC06_01350 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AOC06_07245 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AOC06_00495 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AOC06_08480 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AOC06_00850 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AOC06_07500 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AOC06_04130 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AOC06_01140 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AOC06_08355 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AOC06_00795 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D AOC06_05400 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D AOC06_04425 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AOC06_02225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AOC06_01065 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ppal01004]
D AOC06_06340 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AOC06_06345 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AOC06_06325 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AOC06_06335 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_01120 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AOC06_03040 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AOC06_06075 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AOC06_07155 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D AOC06_00145 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D AOC06_05815 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AOC06_05395 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D AOC06_04825 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AOC06_06350 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AOC06_01535 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AOC06_07700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ppal01006]
D AOC06_07025 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AOC06_01015 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AOC06_03005 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AOC06_00990 squalene/phytoene synthase family protein K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D AOC06_07260 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AOC06_07390 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AOC06_08035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ppal01007]
D AOC06_04530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOC06_07110 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AOC06_02260 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AOC06_07775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AOC06_04955 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AOC06_04890 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AOC06_08265 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AOC06_02465 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOC06_07175 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOC06_07080 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AOC06_01210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AOC06_02880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AOC06_07835 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AOC06_03575 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AOC06_07685 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AOC06_07690 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AOC06_02655 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AOC06_01050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AOC06_05040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AOC06_07095 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AOC06_05020 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AOC06_05015 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AOC06_06155 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AOC06_02800 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AOC06_06580 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00575 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AOC06_00815 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AOC06_07125 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AOC06_00820 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AOC06_01245 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AOC06_07540 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AOC06_04160 chorismate-binding protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D AOC06_06590 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ppal00194]
D AOC06_00115 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AOC06_00110 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AOC06_00105 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AOC06_00100 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AOC06_00095 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AOC06_00090 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AOC06_00085 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AOC06_00080 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ppal03000]
D AOC06_07395 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D AOC06_02345 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D AOC06_04210 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D AOC06_08420 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AOC06_01195 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AOC06_02810 Fe-S cluster assembly transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D AOC06_08700 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AOC06_07750 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AOC06_01800 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D AOC06_04390 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D AOC06_00070 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AOC06_07320 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D AOC06_01270 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AOC06_03350 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D AOC06_01260 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D AOC06_08430 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AOC06_01460 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D AOC06_00835 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ppal03021]
D AOC06_00430 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AOC06_00265 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AOC06_00270 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AOC06_05655 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AOC06_06990 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AOC06_05600 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AOC06_08025 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D AOC06_04045 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AOC06_06025 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AOC06_01375 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AOC06_00240 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AOC06_00665 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D AOC06_00670 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D AOC06_08430 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AOC06_05380 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AOC06_05645 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D AOC06_03420 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ppal03019]
D AOC06_06390 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D AOC06_02290 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AOC06_06305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AOC06_03685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AOC06_06450 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AOC06_02255 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AOC06_04545 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AOC06_05555 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AOC06_03420 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AOC06_07305 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AOC06_07475 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AOC06_03595 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AOC06_05115 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AOC06_05240 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AOC06_07285 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AOC06_01045 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AOC06_07950 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D AOC06_03715 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ppal03011]
D AOC06_06560 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AOC06_02985 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AOC06_00330 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AOC06_00425 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AOC06_00385 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AOC06_06230 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AOC06_00280 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AOC06_00370 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AOC06_07795 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AOC06_00295 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AOC06_00420 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AOC06_00275 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AOC06_00415 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AOC06_00365 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AOC06_05560 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AOC06_06490 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AOC06_00345 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AOC06_06220 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AOC06_00320 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AOC06_07240 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AOC06_07005 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AOC06_00250 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AOC06_00315 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AOC06_00300 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AOC06_00305 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AOC06_00360 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AOC06_00375 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AOC06_06215 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AOC06_00255 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AOC06_00245 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AOC06_00260 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AOC06_07800 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AOC06_00350 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AOC06_00395 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AOC06_00335 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AOC06_00435 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AOC06_00380 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AOC06_06475 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AOC06_05025 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AOC06_01020 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AOC06_00325 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AOC06_00310 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AOC06_00355 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AOC06_01025 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AOC06_07145 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AOC06_00340 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AOC06_00390 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AOC06_03415 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AOC06_06355 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AOC06_07150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AOC06_08785 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AOC06_05030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AOC06_00410 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AOC06_07985 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AOC06_00205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AOC06_00185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AOC06_00200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ppal03009]
D AOC06_06305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AOC06_06450 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AOC06_06300 era; GTPase Era K03595 era; GTPase
D AOC06_01030 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D AOC06_08430 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AOC06_06025 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AOC06_01375 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AOC06_00240 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AOC06_02005 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AOC06_07705 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AOC06_07160 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AOC06_08735 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AOC06_08005 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AOC06_01180 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AOC06_00060 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AOC06_00840 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AOC06_06370 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AOC06_00160 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AOC06_03690 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AOC06_05365 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D AOC06_02300 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AOC06_03155 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D AOC06_01235 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D AOC06_03565 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AOC06_03550 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AOC06_06035 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AOC06_06385 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D AOC06_04670 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AOC06_08535 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D AOC06_04695 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AOC06_06485 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AOC06_04645 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D AOC06_08715 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D AOC06_01090 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AOC06_02945 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D AOC06_04930 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D AOC06_06390 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D AOC06_02290 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AOC06_01265 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AOC06_06460 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AOC06_03590 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D AOC06_03600 hflX; GTPase HflX K03665 hflX; GTPase
D AOC06_07505 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AOC06_05650 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AOC06_06015 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D AOC06_06030 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D AOC06_02305 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D AOC06_07670 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D AOC06_01895 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D AOC06_07935 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D AOC06_00755 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:ppal03016]
D AOC06_08345 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AOC06_04530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOC06_01050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AOC06_07175 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AOC06_01210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AOC06_02465 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AOC06_07110 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AOC06_08265 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AOC06_02880 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AOC06_07835 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AOC06_07095 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AOC06_05040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AOC06_02655 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AOC06_04890 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AOC06_07080 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AOC06_03575 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AOC06_05020 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AOC06_05015 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AOC06_07775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AOC06_04955 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AOC06_00610 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AOC06_01365 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AOC06_04275 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AOC06_06010 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AOC06_02815 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AOC06_07505 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AOC06_07260 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AOC06_08765 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AOC06_00055 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AOC06_02030 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AOC06_05670 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D AOC06_01125 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D AOC06_07685 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AOC06_07690 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AOC06_02260 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AOC06_03140 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AOC06_05975 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D AOC06_07745 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AOC06_07665 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AOC06_04915 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D AOC06_06480 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AOC06_08095 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AOC06_03060 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AOC06_07445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AOC06_08325 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D AOC06_07090 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AOC06_02825 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D AOC06_04420 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D AOC06_07405 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AOC06_01420 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AOC06_03135 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AOC06_03130 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AOC06_07885 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AOC06_02235 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D AOC06_04360 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D AOC06_07410 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AOC06_07010 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AOC06_02230 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AOC06_02525 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AOC06_03685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AOC06_05555 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AOC06_01575 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ppal03012]
D AOC06_06020 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AOC06_05035 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AOC06_02990 elongation factor Ts K02357 tsf; elongation factor Ts
D AOC06_00225 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AOC06_00290 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AOC06_00285 fusA; elongation factor G K02355 fusA; elongation factor G
D AOC06_00725 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AOC06_03000 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D AOC06_00720 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AOC06_07990 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AOC06_00405 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AOC06_02215 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AOC06_06275 efp; elongation factor P K02356 efp; elongation factor P
D AOC06_02885 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AOC06_08540 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ppal03110]
D AOC06_07200 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AOC06_02765 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AOC06_04600 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AOC06_07305 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AOC06_02835 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D AOC06_07475 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AOC06_07300 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AOC06_06115 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D AOC06_02830 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AOC06_04535 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D AOC06_07310 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AOC06_07480 co-chaperone GroES K04078 groES; chaperonin GroES
D AOC06_06320 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D AOC06_00080 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AOC06_08105 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AOC06_02600 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D AOC06_04165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AOC06_04900 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AOC06_01975 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D AOC06_07135 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D AOC06_04925 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AOC06_03650 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AOC06_03425 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D AOC06_08110 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D AOC06_00715 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D AOC06_08255 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AOC06_02875 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D AOC06_00745 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AOC06_06750 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ppal04131]
D AOC06_03560 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AOC06_02540 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AOC06_01190 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AOC06_08120 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AOC06_07530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ppal03032]
D AOC06_05415 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AOC06_08490 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AOC06_08585 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AOC06_05010 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AOC06_06555 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AOC06_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AOC06_06995 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AOC06_07890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AOC06_02265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AOC06_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AOC06_02365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AOC06_01220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AOC06_05430 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02165 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_03495 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AOC06_03055 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AOC06_07055 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AOC06_02970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AOC06_07275 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D AOC06_06595 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AOC06_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AOC06_04750 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AOC06_04755 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AOC06_08755 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ppal03036]
D AOC06_06305 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AOC06_04990 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D AOC06_08490 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AOC06_08585 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AOC06_05010 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AOC06_06555 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AOC06_06115 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D AOC06_06120 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM
D AOC06_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AOC06_02120 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D AOC06_07750 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AOC06_03595 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AOC06_02960 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D AOC06_02455 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D AOC06_06040 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D AOC06_00900 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AOC06_04540 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D AOC06_00850 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AOC06_02645 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AOC06_00845 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D AOC06_00895 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D AOC06_00875 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D AOC06_00905 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AOC06_00955 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D AOC06_04965 cell division protein ZapE K06916 zapE; cell division protein ZapE
D AOC06_02225 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AOC06_04855 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AOC06_08420 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AOC06_08465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AOC06_08475 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AOC06_08485 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D AOC06_00065 ParA family protein K03496 parA; chromosome partitioning protein
D AOC06_00070 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AOC06_04750 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AOC06_04755 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AOC06_00055 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AOC06_00060 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AOC06_08440 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AOC06_01530 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AOC06_03185 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AOC06_00455 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ppal03400]
D AOC06_00985 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AOC06_01255 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AOC06_00735 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AOC06_07955 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AOC06_02785 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AOC06_00950 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AOC06_07190 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AOC06_02100 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D AOC06_04885 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AOC06_07960 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AOC06_08400 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AOC06_03760 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AOC06_02890 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AOC06_02970 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AOC06_07055 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AOC06_07900 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AOC06_02805 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AOC06_06265 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AOC06_07075 exodeoxyribonuclease V subunit gamma K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AOC06_00265 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AOC06_00270 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AOC06_00430 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AOC06_05655 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AOC06_04630 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AOC06_01500 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AOC06_07030 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AOC06_02265 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AOC06_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AOC06_02365 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AOC06_01220 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AOC06_05430 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_02165 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AOC06_03495 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AOC06_07890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AOC06_07595 recA; recombinase RecA K03553 recA; recombination protein RecA
D AOC06_07765 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AOC06_07770 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AOC06_07760 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AOC06_00125 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AOC06_06225 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D AOC06_02940 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AOC06_07400 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AOC06_06295 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AOC06_03505 recR; recombination protein RecR K06187 recR; recombination protein RecR
D AOC06_07330 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AOC06_06595 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AOC06_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AOC06_08490 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AOC06_08585 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AOC06_07750 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AOC06_05010 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AOC06_06555 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AOC06_04990 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D AOC06_03470 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D AOC06_03465 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D AOC06_06240 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AOC06_07590 regulatory protein RecX K03565 recX; regulatory protein
D AOC06_01070 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AOC06_01075 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ppal03029]
D AOC06_00655 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AOC06_06020 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AOC06_05035 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AOC06_02990 elongation factor Ts K02357 tsf; elongation factor Ts
D AOC06_00225 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AOC06_00290 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AOC06_00285 fusA; elongation factor G K02355 fusA; elongation factor G
D AOC06_06300 era; GTPase Era K03595 era; GTPase
D AOC06_07775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AOC06_01210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AOC06_07835 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AOC06_08265 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AOC06_08455 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AOC06_08450 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AOC06_08460 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AOC06_01965 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D AOC06_07890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AOC06_03025 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AOC06_07305 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AOC06_07310 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AOC06_07475 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AOC06_07480 co-chaperone GroES K04078 groES; chaperonin GroES
D AOC06_07300 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AOC06_02815 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AOC06_02830 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AOC06_00715 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D AOC06_03185 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AOC06_08035 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AOC06_08070 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D AOC06_08040 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D AOC06_08770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AOC06_08030 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ppal02000]
D AOC06_02285 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AOC06_07825 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AOC06_02565 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AOC06_06125 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D AOC06_05780 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AOC06_04330 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AOC06_03340 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D AOC06_03195 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D AOC06_00525 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AOC06_05625 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AOC06_00520 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AOC06_05635 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AOC06_05630 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AOC06_00515 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AOC06_05620 membrane integrity-associated transporter subunit PqiC K18480 linN; cholesterol transport system auxiliary component
D AOC06_00535 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D AOC06_00540 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AOC06_02675 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_02680 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_05345 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AOC06_05340 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AOC06_05335 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D AOC06_05330 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AOC06_00040 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AOC06_01920 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AOC06_00045 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AOC06_01925 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AOC06_00050 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AOC06_01930 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AOC06_00030 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AOC06_00035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AOC06_01935 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AOC06_06070 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D AOC06_06065 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D AOC06_06060 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D AOC06_06055 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D AOC06_02355 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AOC06_02350 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AOC06_07930 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AOC06_02900 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D AOC06_02905 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AOC06_06765 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D AOC06_06770 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C
D AOC06_06775 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AOC06_06780 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AOC06_00550 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AOC06_00545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AOC06_03405 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D AOC06_08565 MFS transporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D AOC06_07470 oxlT; oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D AOC06_02580 oxlT; oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D AOC06_05075 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D AOC06_04685 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D AOC06_08405 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AOC06_08135 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AOC06_08140 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D AOC06_08145 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AOC06_07940 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AOC06_08160 ammonium transporter K03320 amt; ammonium transporter, Amt family
D AOC06_07440 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AOC06_02070 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AOC06_00665 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D AOC06_03555 Bax inhibitor-1 family protein K19416 yccA; modulator of FtsH protease
D AOC06_00645 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D AOC06_04040 flagellar motor protein K02556 motA; chemotaxis protein MotA
D AOC06_04080 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AOC06_04075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AOC06_05835 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AOC06_01495 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D AOC06_05840 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AOC06_01490 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AOC06_01450 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D AOC06_01445 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D AOC06_01150 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D AOC06_06670 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D AOC06_00980 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AOC06_03510 carbohydrate porin K16080 mnoP; high affinity Mn2+ porin
D AOC06_06600 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AOC06_03025 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AOC06_03585 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D AOC06_04940 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D AOC06_04675 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D AOC06_07920 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D AOC06_07675 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D AOC06_06870 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D AOC06_07045 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter
D AOC06_03525 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein
D AOC06_04850 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AOC06_01915 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D AOC06_04470 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D AOC06_01830 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D AOC06_08530 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D AOC06_07905 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D AOC06_06080 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D AOC06_06660 chromate transporter K07240 chrA; chromate transporter
D AOC06_06665 chromate transporter K07240 chrA; chromate transporter
D AOC06_07245 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AOC06_02930 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D AOC06_07105 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D AOC06_07100 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AOC06_03445 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AOC06_04365 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D AOC06_00875 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D AOC06_02540 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AOC06_03375 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D AOC06_08640 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D AOC06_01430 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D AOC06_01435 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein
D AOC06_02635 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D AOC06_04855 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AOC06_03355 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D AOC06_03360 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D AOC06_06755 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D AOC06_05305 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:ppal02044]
D AOC06_00965 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AOC06_07570 pilin K02650 pilA; type IV pilus assembly protein PilA
D AOC06_00975 type II/IV secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D AOC06_00485 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D AOC06_06530 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D AOC06_04060 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AOC06_04065 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AOC06_03865 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D AOC06_03875 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AOC06_03890 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AOC06_03925 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AOC06_03935 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AOC06_03940 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AOC06_03945 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AOC06_00745 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AOC06_00925 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AOC06_08105 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AOC06_07420 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AOC06_00235 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AOC06_07425 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AOC06_05540 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AOC06_00400 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AOC06_01055 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AOC06_08020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AOC06_07415 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AOC06_08770 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AOC06_00615 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AOC06_00620 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AOC06_00625 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ppal02042]
D AOC06_00980 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:ppal02022]
D AOC06_05315 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AOC06_05320 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AOC06_07490 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
D AOC06_03750 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AOC06_03755 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AOC06_08725 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AOC06_08720 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
C 02035 Bacterial motility proteins [BR:ppal02035]
D AOC06_03890 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AOC06_03935 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AOC06_03940 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AOC06_03945 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AOC06_04060 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AOC06_04065 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AOC06_03880 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AOC06_03920 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AOC06_03925 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AOC06_03875 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AOC06_04025 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AOC06_03870 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AOC06_03990 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AOC06_03995 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AOC06_04000 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D AOC06_04010 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AOC06_04015 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AOC06_04030 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AOC06_04105 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AOC06_04110 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AOC06_04045 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AOC06_04040 flagellar motor protein K02556 motA; chemotaxis protein MotA
D AOC06_04080 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AOC06_04075 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AOC06_07570 pilin K02650 pilA; type IV pilus assembly protein PilA
D AOC06_00975 type II/IV secretion system protein K02652 pilB; type IV pilus assembly protein PilB
D AOC06_00965 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AOC06_00485 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ppal04812]
D AOC06_08465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AOC06_00905 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AOC06_00900 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AOC06_00065 ParA family protein K03496 parA; chromosome partitioning protein
D AOC06_00070 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ppal04147]
D AOC06_04545 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AOC06_01190 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AOC06_07535 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AOC06_07530 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AOC06_04165 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AOC06_07475 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AOC06_07305 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AOC06_05695 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AOC06_03110 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AOC06_00225 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AOC06_00290 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AOC06_00610 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AOC06_04825 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AOC06_04640 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AOC06_08370 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AOC06_01470 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AOC06_02485 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AOC06_07225 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AOC06_02550 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AOC06_00450 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AOC06_02010 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D AOC06_05150 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AOC06_07755 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AOC06_06455 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AOC06_03795 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_04970 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AOC06_06505 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D AOC06_05545 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AOC06_08120 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ppal02048]
D AOC06_05195 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D AOC06_05200 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AOC06_05705 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AOC06_05700 PbsX family transcriptional regulator K07172 mazE; antitoxin MazE
D AOC06_01805 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D AOC06_01800 ribbon-helix-helix protein, CopG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D AOC06_01865 prevent-host-death family protein K18923 stbD; antitoxin StbD
D AOC06_03455 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D AOC06_03460 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D AOC06_02340 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D AOC06_02335 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D AOC06_01855 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D AOC06_01860 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1
D AOC06_01575 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D AOC06_01570 antitoxin K18829 mvpT; antitoxin VapB
D AOC06_05995 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D AOC06_00905 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AOC06_08465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AOC06_04750 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AOC06_04755 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AOC06_04530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AOC06_04235 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D AOC06_02815 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ppal01504]
D AOC06_04855 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AOC06_04850 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AOC06_07490 response regulator transcription factor K07690 evgA; two-component system, NarL family, response regulator EvgA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppal00537]
D AOC06_05150 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ppal03100]
D AOC06_04525 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AOC06_00195 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AOC06_05640 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AOC06_04765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AOC06_04515 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AOC06_07975 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AOC06_04520 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AOC06_06255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AOC06_00190 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AOC06_05535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_03680 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_04615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_02330 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AOC06_02220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AOC06_02925 tRNA-Met K14230 tRNA-Met; tRNA Met
D AOC06_06985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D AOC06_07605 tRNA-Met K14230 tRNA-Met; tRNA Met
D AOC06_08710 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AOC06_01010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AOC06_05000 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AOC06_05235 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AOC06_05690 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AOC06_02660 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AOC06_00220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AOC06_00230 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AOC06_04590 tRNA-Val K14237 tRNA-Val; tRNA Val
D AOC06_05045 tRNA-Val K14237 tRNA-Val; tRNA Val
D AOC06_00185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AOC06_00200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AOC06_00205 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AOC06_03490 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AOC06_06615 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AOC06_02510 aldehyde dehydrogenase family protein K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D AOC06_05900 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D AOC06_00930 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D AOC06_05895 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D AOC06_00935 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D AOC06_05070 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D AOC06_05550 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AOC06_06810 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AOC06_02110 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D AOC06_02515 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AOC06_04400 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AOC06_04185 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AOC06_01985 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D AOC06_06195 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AOC06_05775 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AOC06_02115 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D AOC06_06815 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AOC06_06850 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D AOC06_02870 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AOC06_05285 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AOC06_08695 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AOC06_03535 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AOC06_08245 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AOC06_04150 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D AOC06_04145 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D AOC06_02370 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AOC06_03065 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AOC06_07335 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D AOC06_04405 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D AOC06_07945 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D AOC06_02435 frc; formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D AOC06_02440 frc; formyl-CoA transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D AOC06_04355 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AOC06_04960 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D AOC06_02910 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AOC06_04440 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AOC06_08745 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AOC06_07345 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D AOC06_06365 maf; septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D AOC06_03275 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AOC06_02555 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D AOC06_02560 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D AOC06_01115 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D AOC06_02790 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D AOC06_02470 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D AOC06_02840 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D AOC06_06420 ferredoxin family protein K05524 fdxA; ferredoxin
D AOC06_02820 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D AOC06_06510 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D AOC06_07380 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D AOC06_06550 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D AOC06_07845 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D AOC06_08175 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AOC06_07210 cold-shock protein K03704 cspA; cold shock protein
D AOC06_02210 cold-shock protein K03704 cspA; cold shock protein
D AOC06_08165 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D AOC06_02705 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D AOC06_07205 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AOC06_04610 trigger factor K03545 tig; trigger factor
D AOC06_01990 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D AOC06_03095 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D AOC06_03075 peptidase K07395 K07395; putative proteasome-type protease
D AOC06_07655 OsmC family protein K07397 yhfA; putative redox protein
D AOC06_07805 OsmC family protein K07397 yhfA; putative redox protein
D AOC06_05765 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D AOC06_07140 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D AOC06_00710 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D AOC06_02760 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D AOC06_08750 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D AOC06_04170 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D AOC06_03545 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
C 99979 Viral proteins
C 99998 Others
D AOC06_03500 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AOC06_02530 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D AOC06_05425 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D AOC06_00995 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
C 99978 Cell growth
D AOC06_04395 septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D AOC06_06005 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D AOC06_06200 PhoH family protein K07175 phoH2; PhoH-like ATPase
D AOC06_01515 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D AOC06_02650 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D AOC06_00530 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D AOC06_03030 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D AOC06_03540 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D AOC06_06760 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D AOC06_06745 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D AOC06_05325 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D AOC06_00440 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D AOC06_00790 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D AOC06_00470 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AOC06_06045 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D AOC06_07785 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D AOC06_05090 YihY family inner membrane protein K07058 K07058; membrane protein
D AOC06_06635 sulfurtransferase K07146 K07146; UPF0176 protein
D AOC06_02250 heme-binding protein K11477 glcG; glc operon protein GlcG
D AOC06_05945 nrfB; phage adsorption protein NrfB K11740 nfrB; bacteriophage N4 adsorption protein B
D AOC06_08705 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D AOC06_02735 SlyX family protein K03745 slyX; SlyX protein
D AOC06_07255 VTT domain-containing protein K03975 dedA; membrane-associated protein
D AOC06_02730 phage holin family protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D AOC06_04445 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D AOC06_00945 ATP-binding protein K06923 K06923; uncharacterized protein
D AOC06_08295 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D AOC06_04375 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D AOC06_04460 hypothetical protein K07000 K07000; uncharacterized protein
D AOC06_08200 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D AOC06_05985 TSUP family transporter K07090 K07090; uncharacterized protein
D AOC06_06945 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AOC06_02400 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AOC06_02860 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AOC06_04335 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D AOC06_04340 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D AOC06_04345 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D AOC06_00020 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D AOC06_06730 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D AOC06_02755 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D AOC06_08775 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AOC06_07215 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D AOC06_07000 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D AOC06_08195 DUF493 family protein K09158 K09158; uncharacterized protein
D AOC06_08240 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D AOC06_01480 Trm112 family protein K09791 K09791; uncharacterized protein
D AOC06_03105 RnfH family protein K09801 K09801; uncharacterized protein
D AOC06_08680 BrnT family toxin K09803 K09803; uncharacterized protein
D AOC06_01520 BrnT family toxin K09803 K09803; uncharacterized protein
D AOC06_03480 BrnT family toxin K09803 K09803; uncharacterized protein
D AOC06_04190 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D AOC06_04380 N-acetyltransferase K09919 K09919; uncharacterized protein
D AOC06_01960 DUF3820 family protein K09954 K09954; uncharacterized protein
D AOC06_02085 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D AOC06_03440 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024