+D GENES KO
#
KEGG Orthology (KO) - Pediococcus pentosaceus ATCC 25745
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ppe00010]
D PEPE_0732 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PEPE_1350 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0144 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PEPE_1352 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PEPE_0461 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PEPE_0459 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PEPE_0460 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PEPE_1710 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_0462 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PEPE_1092 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PEPE_1773 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PEPE_1772 Pyruvate dehydrogenase (E1) component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PEPE_1771 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0218 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_1059 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PEPE_0202 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PEPE_0221 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_1776 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0106 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0283 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0581 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_1602 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0077 PTS system IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:ppe00020]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_0209 Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PEPE_0246 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PEPE_1773 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PEPE_1772 Pyruvate dehydrogenase (E1) component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PEPE_1771 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ppe00030]
D PEPE_1350 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PEPE_1267 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PEPE_1198 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PEPE_0713 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PEPE_1362 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PEPE_0834 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PEPE_1506 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PEPE_0353 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D PEPE_1239 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15]
D PEPE_1699 Sugar kinase, ribokinase family K00852 rbsK; ribokinase [EC:2.7.1.15]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_0295 Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PEPE_1168 Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PEPE_0073 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D PEPE_1361 gluconate kinase, FGGY family K25031 gntK; gluconokinase [EC:2.7.1.12]
D PEPE_1352 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PEPE_0144 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ppe00040]
D PEPE_0444 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PEPE_0164 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PEPE_0834 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PEPE_0165 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D PEPE_0188 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PEPE_0187 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:ppe00051]
D PEPE_1442 fructokinase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PEPE_0516 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PEPE_1334 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0144 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PEPE_1165 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PEPE_0187 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PEPE_1352 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PEPE_0461 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PEPE_1164 PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIA component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PEPE_0142 PTS system D-fructose-specific IIA component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PEPE_1761 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PEPE_1518 PTS system D-glucose-specific IIB component, Man family / PTS system D-glucose-specific IIA component, Man family K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1513 Phosphotransferase system, mannose/fructose-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1517 PTS system D-glucose-specific IIC component, Man family K02795 manY; mannose PTS system EIIC component
D PEPE_1758 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D PEPE_1516 PTS system D-glucose-specific IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_1757 PTS system IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_1197 glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
C 00052 Galactose metabolism [PATH:ppe00052]
D PEPE_1059 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PEPE_0202 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PEPE_0221 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PEPE_0206 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PEPE_0113 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PEPE_0208 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PEPE_1475 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PEPE_0207 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PEPE_0444 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_0732 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PEPE_0204 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PEPE_0205 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PEPE_0574 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PEPE_0513 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PEPE_0517 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0143 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D PEPE_0519 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PEPE_0521 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D PEPE_0174 Phosphotransferase system, mannose/fructose-specific component IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PEPE_1755 galactosamine 6-phosphate isomerase AgaS K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
D PEPE_0171 transcriptional regulator, GntR family K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D PEPE_0172 N-acetylgalactosamine PTS, EIIC K10985 agaC; galactosamine PTS system EIIC component
D PEPE_0173 PTS system D-galactosamine-specific EIID component, Man family K10986 agaD; galactosamine PTS system EIID component
C 00053 Ascorbate and aldarate metabolism
D PEPE_0164 L-ribulose 5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:ppe00500]
D PEPE_1042 PTS system IIA component, Glc family / PTS system IIB component, Glc family / PTS system IIC component, Glc family K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PEPE_0518 PTS system sucrose-specific IIC component, Glc family / PTS system sucrose-specific IIB component, Glc family / PTS system sucrose-specific IIA component, Glc family K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PEPE_0519 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PEPE_0444 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PEPE_0282 cellobiose-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PEPE_0580 cellobiose-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PEPE_0281 cellobiose-specific PTS system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PEPE_0578 cellobiose-specific PTS system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PEPE_0091 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0579 Phosphotransferase system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D PEPE_1775 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0231 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0023 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_1598 Phosphotransferase system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D PEPE_1776 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0106 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0283 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0581 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_1602 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PEPE_0521 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D PEPE_0967 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D PEPE_0966 Predicted sugar phosphatase of HAD family K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D PEPE_0077 PTS system IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PEPE_1806 alpha, alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_0732 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PEPE_1350 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PEPE_1442 fructokinase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PEPE_0516 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppe00520]
D PEPE_0077 PTS system IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PEPE_1816 PTS system N-acetylglucosamine-specific IIB component, Glc family / PTS system N-acetylglucosamine-specific IIA component, Glc family / PTS system N-acetylglucosamine-specific IIC component, Glc family K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PEPE_1754 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PEPE_1528 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PEPE_0335 Glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PEPE_1442 fructokinase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PEPE_0516 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PEPE_0478 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PEPE_0477 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PEPE_0293 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PEPE_1043 Predicted sugar phosphate isomerase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PEPE_1570 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PEPE_0474 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PEPE_0152 Putative N-acetylmannosamine-6-phosphate epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PEPE_0597 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PEPE_0732 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_0444 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PEPE_0206 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PEPE_0113 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PEPE_0208 UTP-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PEPE_1475 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PEPE_0207 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PEPE_0574 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PEPE_1761 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PEPE_1518 PTS system D-glucose-specific IIB component, Man family / PTS system D-glucose-specific IIA component, Man family K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1513 Phosphotransferase system, mannose/fructose-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1517 PTS system D-glucose-specific IIC component, Man family K02795 manY; mannose PTS system EIIC component
D PEPE_1758 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D PEPE_1516 PTS system D-glucose-specific IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_1757 PTS system IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_1350 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PEPE_1334 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:ppe00620]
D PEPE_1773 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PEPE_1772 Pyruvate dehydrogenase (E1) component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PEPE_1771 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_0336 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_1822 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_0337 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PEPE_1092 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PEPE_0864 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PEPE_0860 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PEPE_0862 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PEPE_0863 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PEPE_0717 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PEPE_0639 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D PEPE_1252 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D PEPE_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0218 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0876 D-lactate dehydrogenase, LdhA K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PEPE_0025 Aldo/keto reductase of diketogulonate reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D PEPE_1694 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D PEPE_0246 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PEPE_0209 Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PEPE_1617 Malolactic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppe00630]
D PEPE_0739 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PEPE_1327 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_0955 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:ppe00640]
D PEPE_0336 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_1822 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_0337 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_0864 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PEPE_0860 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PEPE_0862 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PEPE_0863 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PEPE_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0218 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0025 Aldo/keto reductase of diketogulonate reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D PEPE_0276 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00650 Butanoate metabolism [PATH:ppe00650]
D PEPE_1821 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PEPE_0868 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PEPE_0405 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PEPE_0406 Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D PEPE_0286 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:ppe00660]
D PEPE_0405 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PEPE_0406 Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00562 Inositol phosphate metabolism [PATH:ppe00562]
D PEPE_1157 Archaeal fructose-1,6-bisphosphatase related enzyme of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PEPE_0096 Predicted dehydrogenase related protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D PEPE_0461 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ppe00190]
D PEPE_1319 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PEPE_1317 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PEPE_1318 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PEPE_1320 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PEPE_1316 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PEPE_1323 F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PEPE_1321 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PEPE_1322 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PEPE_0956 Inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ppe00710]
D PEPE_0460 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PEPE_0459 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PEPE_1352 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PEPE_0144 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PEPE_1506 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PEPE_0461 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PEPE_0834 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:ppe00720]
D PEPE_0246 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PEPE_0209 Fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PEPE_0864 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PEPE_0860 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PEPE_0862 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PEPE_0863 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PEPE_0939 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PEPE_0817 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PEPE_0337 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PEPE_0336 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_1822 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:ppe00680]
D PEPE_1327 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PEPE_0462 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PEPE_1352 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PEPE_0144 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0336 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_1822 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_0337 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PEPE_1710 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:ppe00910]
D PEPE_0739 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PEPE_1630 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PEPE_0192 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PEPE_0657 Carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
D PEPE_1265 Phosphoesterase, DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ppe00061]
D PEPE_0864 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PEPE_0860 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PEPE_0862 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PEPE_0863 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PEPE_0856 Acyl carrier protein K02078 acpP; acyl carrier protein
D PEPE_0841 Acyl carrier protein K02078 acpP; acyl carrier protein
D PEPE_0857 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PEPE_0855 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PEPE_1511 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PEPE_0859 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PEPE_0903 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_1280 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0858 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0026 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0854 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PEPE_0861 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PEPE_0865 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:ppe00074]
D PEPE_1560 Phosphopantetheinyl transferase (holo-ACP synthase) K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PEPE_0856 Acyl carrier protein K02078 acpP; acyl carrier protein
D PEPE_0841 Acyl carrier protein K02078 acpP; acyl carrier protein
D PEPE_0857 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ppe00561]
D PEPE_0955 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PEPE_1662 dihydroxyacetone kinase DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PEPE_1661 dihydroxyacetone kinase DhaL subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PEPE_1660 dihydroxyacetone kinase DhaM subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PEPE_1623 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PEPE_0840 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PEPE_0960 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PEPE_0873 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PEPE_1367 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PEPE_0612 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D PEPE_0604 Phosphoglycerol transferase related protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PEPE_0367 Phosphoglycerol transferase related protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PEPE_0513 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PEPE_0517 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PEPE_0276 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:ppe00564]
D PEPE_0443 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PEPE_1624 glycerol 3-phosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D PEPE_0960 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PEPE_0873 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PEPE_0602 Glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D PEPE_1367 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PEPE_0040 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PEPE_0735 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PEPE_0882 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PEPE_1278 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PEPE_1839 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PEPE_1283 cardiolipin synthetase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ppe00600]
D PEPE_0204 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PEPE_0205 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PEPE_0513 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PEPE_0517 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ppe00230]
D PEPE_1177 NUDIX family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_0295 Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PEPE_1168 Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PEPE_1461 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PEPE_1457 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PEPE_1459 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PEPE_1462 phosphoribosylformylglycinamidine synthase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PEPE_1464 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PEPE_1463 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PEPE_1460 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PEPE_1373 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PEPE_1466 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PEPE_1467 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PEPE_1465 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PEPE_1246 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PEPE_1458 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PEPE_1129 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PEPE_1546 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PEPE_1719 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PEPE_1051 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PEPE_1644 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PEPE_1256 Xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PEPE_1374 Adenine/guanine phosphoribosyltransferase related PRPP-binding protein K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PEPE_0383 NUDIX family hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D PEPE_0412 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PEPE_0595 IMP dehydrogenase/GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D PEPE_0825 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PEPE_0385 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PEPE_1488 ribonucleoside-diphosphate reductase class Ib alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PEPE_1489 ribonucleoside-diphosphate reductase class Ib beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PEPE_0484 ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PEPE_1120 Guanosine polyphosphate pyrophosphohydrolase/synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PEPE_0257 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PEPE_1203 Uncharacterized protein, RelA_SpoT domain K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PEPE_1663 Uncharacterized protein, RelA_SpoT domain K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PEPE_1247 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PEPE_1397 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PEPE_1630 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PEPE_0192 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ppe00240]
D PEPE_0316 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PEPE_0944 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PEPE_0315 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PEPE_0943 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PEPE_0313 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PEPE_0314 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PEPE_0317 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PEPE_1675 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PEPE_0879 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PEPE_1051 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PEPE_1644 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PEPE_0383 NUDIX family hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D PEPE_1571 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PEPE_1080 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PEPE_0724 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PEPE_1326 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PEPE_0942 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PEPE_0241 Dihydroorotase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PEPE_0484 ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PEPE_1488 ribonucleoside-diphosphate reductase class Ib alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PEPE_1489 ribonucleoside-diphosphate reductase class Ib beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PEPE_1150 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PEPE_1481 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PEPE_1504 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PEPE_1331 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PEPE_1070 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppe00250]
D PEPE_0662 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PEPE_0301 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PEPE_1469 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PEPE_0659 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PEPE_0166 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PEPE_1247 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PEPE_1246 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PEPE_0313 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PEPE_1821 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PEPE_0739 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PEPE_0316 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PEPE_0944 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PEPE_0315 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PEPE_0943 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PEPE_1463 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PEPE_0478 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PEPE_1461 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ppe00260]
D PEPE_0137 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PEPE_0130 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PEPE_1327 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PEPE_0955 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PEPE_1710 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_0167 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PEPE_1745 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
C 00270 Cysteine and methionine metabolism [PATH:ppe00270]
D PEPE_0641 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PEPE_1175 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PEPE_1296 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PEPE_0532 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PEPE_1638 Autoinducer AI2 synthesis LuxS-like protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PEPE_0137 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PEPE_0130 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PEPE_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0218 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:ppe00280]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_0356 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PEPE_0868 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppe00290]
D PEPE_0167 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PEPE_0405 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00300 Lysine biosynthesis [PATH:ppe00300]
D PEPE_0137 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PEPE_0130 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PEPE_0133 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PEPE_0132 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PEPE_0135 Tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PEPE_0111 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PEPE_0138 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PEPE_0136 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PEPE_0131 aromatic amino acid aminotransferase apoenzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PEPE_0134 Metal-dependent amidase/aminoacylase/carboxypeptidase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D PEPE_0660 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PEPE_1562 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ppe00310]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_1821 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:ppe00220]
D PEPE_1631 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PEPE_1629 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PEPE_1463 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PEPE_0739 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PEPE_0316 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PEPE_0944 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PEPE_0315 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PEPE_0943 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PEPE_1630 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PEPE_0192 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:ppe00330]
D PEPE_0241 Dihydroorotase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PEPE_0191 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PEPE_0193 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PEPE_1529 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PEPE_0379 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
D PEPE_0107 Histidinol phosphatase related hydrolase of the PHP family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
C 00350 Tyrosine metabolism [PATH:ppe00350]
D PEPE_1821 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PEPE_0182 Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism
D PEPE_0182 Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00380 Tryptophan metabolism
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:ppe00430]
D PEPE_0166 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PEPE_0337 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PEPE_0336 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PEPE_1822 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ppe00450]
D PEPE_0488 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PEPE_0445 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PEPE_0266 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ppe00460]
D PEPE_0301 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PEPE_1469 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PEPE_1327 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ppe00470]
D PEPE_1559 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PEPE_1302 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PEPE_1590 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PEPE_1588 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PEPE_1463 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PEPE_1257 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PEPE_1187 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PEPE_0662 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PEPE_1745 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D PEPE_0138 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PEPE_0136 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ppe00480]
D PEPE_0417 lysyl aminopeptidase, Metallo peptidase, MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PEPE_0153 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, related enzyme K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PEPE_0244 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, related enzyme K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PEPE_0713 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PEPE_1362 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PEPE_1267 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ppe00511]
D PEPE_0204 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PEPE_0205 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ppe00542]
D PEPE_0423 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppe00541]
D PEPE_0444 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PEPE_1475 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PEPE_0207 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PEPE_0574 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PEPE_1334 mannose-6-phosphate isomerase, type 1 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PEPE_0293 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PEPE_0597 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:ppe00550]
D PEPE_1570 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PEPE_0474 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PEPE_0686 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PEPE_1187 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PEPE_0660 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PEPE_1302 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PEPE_1562 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PEPE_1105 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D PEPE_0881 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PEPE_0644 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PEPE_1188 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PEPE_1186 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PEPE_0931 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PEPE_0672 Membrane carboxypeptidase (penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PEPE_1189 Cell division protein FtsI/penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B
D PEPE_0727 cell elongation-specific peptidoglycan D,D-transpeptidase K21465 pbpA; penicillin-binding protein A
D PEPE_1715 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PEPE_1332 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D PEPE_1333 Predicted glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:ppe00552]
D PEPE_0644 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PEPE_0423 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PEPE_1526 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PEPE_1113 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D PEPE_1603 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D PEPE_1608 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D PEPE_1112 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D PEPE_0224 Glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PEPE_0225 Glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PEPE_0067 Glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PEPE_1590 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PEPE_1588 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PEPE_1589 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D PEPE_1587 D-alanyl transfer protein K03740 dltD; D-alanine transfer protein
D PEPE_1441 Transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PEPE_0591 Transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PEPE_0604 Phosphoglycerol transferase related protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PEPE_0367 Phosphoglycerol transferase related protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PEPE_0612 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D PEPE_0613 Glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D PEPE_0543 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D PEPE_0423 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:ppe00543]
D PEPE_0423 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PEPE_0105 Glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D PEPE_0126 Glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ppe00730]
D PEPE_0559 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PEPE_0228 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PEPE_1174 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1294 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1293 Thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PEPE_0558 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PEPE_0560 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PEPE_0833 Predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PEPE_0835 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PEPE_1397 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PEPE_0561 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:ppe00740]
D PEPE_1818 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PEPE_1820 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PEPE_0915 Predicted hydrolase of the HAD superfamily K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D PEPE_1817 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PEPE_1819 Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PEPE_0893 FAD synthase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PEPE_0558 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PEPE_1177 NUDIX family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
D PEPE_0668 Aryl-alcohol dehydrogenase related enzyme K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ppe00760]
D PEPE_1525 Nicotinic acid phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PEPE_0706 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PEPE_1524 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PEPE_1202 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PEPE_1821 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ppe00770]
D PEPE_0405 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PEPE_0407 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PEPE_0827 Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PEPE_1152 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PEPE_0690 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PEPE_1560 Phosphopantetheinyl transferase (holo-ACP synthase) K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:ppe00780]
D PEPE_0859 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PEPE_0903 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_1280 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0858 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0026 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0854 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PEPE_0861 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PEPE_0865 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PEPE_1636 Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ppe00785]
D PEPE_1774 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_1773 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PEPE_1772 Pyruvate dehydrogenase (E1) component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PEPE_1771 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:ppe00790]
D PEPE_1069 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PEPE_1290 Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PEPE_1818 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
C 00670 One carbon pool by folate [PATH:ppe00670]
D PEPE_1069 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PEPE_0939 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PEPE_0817 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PEPE_1327 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PEPE_1459 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PEPE_1458 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PEPE_0829 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PEPE_1070 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PEPE_0729 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppe00130]
D PEPE_1047 Putative NADPH-quinone reductase (modulator of drug activity B) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PEPE_1768 Predicted nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ppe00900]
D PEPE_0271 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PEPE_0868 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PEPE_0258 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D PEPE_0927 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PEPE_0925 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D PEPE_0926 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D PEPE_0924 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PEPE_0820 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PEPE_0881 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:ppe01054]
D PEPE_0662 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PEPE_0055 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ppe00261]
D PEPE_0137 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PEPE_0130 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PEPE_0133 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PEPE_0132 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ppe00521]
D PEPE_0732 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PEPE_0446 alpha-phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PEPE_1157 Archaeal fructose-1,6-bisphosphatase related enzyme of inositol monophosphatase family K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PEPE_0732 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D PEPE_0857 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PEPE_0903 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_1280 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0858 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0026 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0865 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PEPE_0856 Acyl carrier protein K02078 acpP; acyl carrier protein
D PEPE_0841 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D PEPE_0641 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ppe00362]
D PEPE_0914 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PEPE_1682 Gamma-carboxymuconolactone decarboxylase subunit-like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation [PATH:ppe00627]
D PEPE_0717 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PEPE_0250 3-polyprenyl-4-hydroxybenzoate decarboxylase related decarboxylase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D PEPE_0251 3-polyprenyl-4-hydroxybenzoate decarboxylase K22959 lpdB; gallate decarboxylase subunit B
D PEPE_0252 hypothetical protein K22960 lpdD; gallate decarboxylase subunit D
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D PEPE_1621 Predicted hydrolase (HAD superfamily) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D PEPE_1621 Predicted hydrolase (HAD superfamily) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
D PEPE_0182 Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:ppe00622]
D PEPE_0182 Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D PEPE_0914 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D PEPE_0914 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ppe03020]
D PEPE_1426 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PEPE_1425 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PEPE_1392 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PEPE_0826 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PEPE_1572 DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
D PEPE_1728 Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ppe03010]
D PEPE_1079 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D PEPE_0877 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PEPE_1412 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PEPE_1297 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PEPE_1401 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PEPE_0007 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D PEPE_1421 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PEPE_1404 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PEPE_1385 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PEPE_1419 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PEPE_1393 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PEPE_1422 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PEPE_1394 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D PEPE_0222 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PEPE_1405 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PEPE_1146 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PEPE_0847 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D PEPE_1409 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PEPE_0009 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D PEPE_1414 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PEPE_1147 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D PEPE_1109 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D PEPE_1492 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D PEPE_1415 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PEPE_1418 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PEPE_1417 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D PEPE_1406 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PEPE_1403 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PEPE_1490 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D PEPE_0011 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D PEPE_1491 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D PEPE_1493 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PEPE_1386 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PEPE_1408 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PEPE_1399 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PEPE_1411 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D PEPE_1391 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D PEPE_1402 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PEPE_0850 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D PEPE_0701 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D PEPE_0811 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D PEPE_1413 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PEPE_1416 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PEPE_1407 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PEPE_0813 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D PEPE_0836 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D PEPE_1410 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PEPE_1400 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D PEPE_1568 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D PEPE_0712 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D PEPE_1496 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D PEPE_0728 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D PEPE_1847 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D PEPE_0700 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D PEPE_1395 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D PEPE_r1223 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r1541 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0236 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0618 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1538 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r0237 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r0109 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1222 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1221 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r1537 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0110 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0238 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0619 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppe00970]
D PEPE_t0098 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PEPE_t0617 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PEPE_t1539 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PEPE_t0808 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t0456 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t0625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t1430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t0594 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t1220 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PEPE_t1536 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PEPE_t0631 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PEPE_t0638 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PEPE_t1216 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PEPE_t1211 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PEPE_t1342 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PEPE_t1530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PEPE_t0636 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PEPE_t1218 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PEPE_t1341 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PEPE_t0633 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t0623 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t1431 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t0665 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t1213 tRNA-His K14226 tRNA-His; tRNA His
D PEPE_t0616 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PEPE_t1540 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PEPE_t0634 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PEPE_t0624 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1212 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t0656 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1433 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1519 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1798 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PEPE_t0621 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PEPE_t0627 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0630 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0637 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0628 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0632 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PEPE_t1215 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PEPE_t0626 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PEPE_t1429 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PEPE_t0629 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t0635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t1128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t1219 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t0239 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t1432 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t0622 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t1535 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t1214 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PEPE_t1531 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PEPE_t0620 tRNA-Val K14237 tRNA-Val; tRNA Val
D PEPE_t1434 tRNA-Val K14237 tRNA-Val; tRNA Val
D PEPE_t1217 tRNA-Val K14237 tRNA-Val; tRNA Val
D PEPE_1501 glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PEPE_1369 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PEPE_1368 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PEPE_1370 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PEPE_1263 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PEPE_1115 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PEPE_0547 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PEPE_1102 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PEPE_1101 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PEPE_0694 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PEPE_1436 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PEPE_1500 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PEPE_0266 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PEPE_0829 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PEPE_1291 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PEPE_0645 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PEPE_1179 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PEPE_1542 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PEPE_0669 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PEPE_0884 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PEPE_1116 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PEPE_0721 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PEPE_0722 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PEPE_0235 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PEPE_0256 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ppe03060]
D PEPE_0063 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1398 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1495 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PEPE_0463 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PEPE_1268 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D PEPE_0716 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_1845 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_0428 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0062 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0846 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PEPE_0844 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PEPE_1841 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PEPE_0940 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ppe04122]
D PEPE_1174 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1294 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1172 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PEPE_1293 Thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ppe03018]
D PEPE_0462 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PEPE_0464 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PEPE_1561 Superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PEPE_0562 ATP-dependent DNA helicase, RecQ-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PEPE_1082 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PEPE_1569 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PEPE_1448 Predicted membrane-associated HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PEPE_1275 Predicted membrane-associated HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PEPE_1162 RNase J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PEPE_1145 Predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0896 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D PEPE_0421 Chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ppe03030]
D PEPE_0472 DNA polymerase III, epsilon subunit related 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PEPE_1094 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PEPE_0885 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PEPE_1484 DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PEPE_1479 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PEPE_1148 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PEPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PEPE_0012 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PEPE_0760 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PEPE_1100 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PEPE_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0758 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1021 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0304 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PEPE_0971 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PEPE_0688 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PEPE_1612 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ppe03410]
D PEPE_0469 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PEPE_0689 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PEPE_1836 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PEPE_1301 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PEPE_1613 Exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PEPE_1111 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PEPE_0688 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PEPE_1130 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PEPE_1612 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ppe03420]
D PEPE_1552 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PEPE_0449 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PEPE_0448 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PEPE_1135 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PEPE_1372 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0404 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0255 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0688 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PEPE_1612 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PEPE_1728 Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:ppe03430]
D PEPE_1274 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PEPE_1259 MutS family ATPase K07456 mutS2; DNA mismatch repair protein MutS2
D PEPE_1273 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PEPE_1372 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0404 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0255 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0818 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PEPE_0819 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PEPE_1130 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PEPE_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0758 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1021 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1094 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PEPE_0885 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PEPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PEPE_1484 DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PEPE_1148 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PEPE_1479 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PEPE_0472 DNA polymerase III, epsilon subunit related 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PEPE_1612 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ppe03440]
D PEPE_1130 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PEPE_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0758 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1021 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PEPE_1103 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PEPE_1482 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D PEPE_1276 RecA protein K03553 recA; recombination protein RecA
D PEPE_0688 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PEPE_1272 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PEPE_1271 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PEPE_0839 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PEPE_1169 ATP-dependent DNA helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PEPE_1094 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PEPE_0885 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PEPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PEPE_1484 DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PEPE_1148 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PEPE_1479 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PEPE_0472 DNA polymerase III, epsilon subunit related 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PEPE_0828 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D PEPE_0678 hypothetical protein K04453 MAX; Max protein
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ppe02010]
D PEPE_0242 ABC-type proline/glycine betaine transport system, permease and substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PEPE_1653 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D PEPE_1652 glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05846 opuBD; osmoprotectant transport system permease protein
D PEPE_1654 glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D PEPE_1655 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PEPE_0243 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PEPE_1698 ABC-type ribose transport system, auxiliary component K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PEPE_0433 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D PEPE_0434 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D PEPE_0435 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D PEPE_0436 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PEPE_0437 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PEPE_1068 amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family K10036 glnH; glutamine transport system substrate-binding protein
D PEPE_1067 amino acid ABC transporter ATP-binding protein, PAAT family K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_0390 amino acid ABC transporter substrate-binding protein, PAAT family K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D PEPE_0391 amino acid ABC transporter membrane protein 1, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PEPE_0392 amino acid ABC transporter membrane protein 2, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PEPE_0389 amino acid ABC transporter ATP-binding protein, PAAT family K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_1137 amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family K17077 artQ; arginine/lysine/histidine transport system permease protein
D PEPE_1136 amino acid ABC transporter ATP-binding protein, PAAT family K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_1309 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D PEPE_1310 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D PEPE_1311 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D PEPE_1584 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0396 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0397 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D PEPE_0398 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D PEPE_0399 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D PEPE_0400 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D PEPE_1592 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PEPE_1637 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PEPE_1388 ABC-type cobalt transport system, permease component CbiQ related transporter K16785 ecfT; energy-coupling factor transport system permease protein
D PEPE_1390 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PEPE_1389 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PEPE_1607 ABC-type polysaccharide/polyol phosphate export system, permease component K09692 tagG; teichoic acid transport system permease protein
D PEPE_1606 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D PEPE_1658 ABC-type multidrug transport system, ATPase and permease component K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PEPE_1337 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PEPE_1336 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PEPE_0085 bacteriocin-processing peptidase, Cysteine peptidase, MEROPS family C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D PEPE_0016 ATPase component of ABC transporter with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ppe02060]
D PEPE_0610 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PEPE_0609 Phosphotransferase system, HPr-related protein K02784 ptsH; phosphocarrier protein HPr
D PEPE_0077 PTS system IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PEPE_1816 PTS system N-acetylglucosamine-specific IIB component, Glc family / PTS system N-acetylglucosamine-specific IIA component, Glc family / PTS system N-acetylglucosamine-specific IIC component, Glc family K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PEPE_1042 PTS system IIA component, Glc family / PTS system IIB component, Glc family / PTS system IIC component, Glc family K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PEPE_0518 PTS system sucrose-specific IIC component, Glc family / PTS system sucrose-specific IIB component, Glc family / PTS system sucrose-specific IIA component, Glc family K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PEPE_1804 PTS system IIC component, Glc family / PTS system IIB component, Glc family / PTS system IIA component, Glc family K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PEPE_0079 PTS system IIB component, Glc family / PTS system IIC component, Glc family K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PEPE_0282 cellobiose-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PEPE_0580 cellobiose-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PEPE_0281 cellobiose-specific PTS system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PEPE_0578 cellobiose-specific PTS system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PEPE_0091 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0579 Phosphotransferase system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D PEPE_1775 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0231 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0023 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_1598 Phosphotransferase system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D PEPE_1761 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PEPE_1518 PTS system D-glucose-specific IIB component, Man family / PTS system D-glucose-specific IIA component, Man family K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1513 Phosphotransferase system, mannose/fructose-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1517 PTS system D-glucose-specific IIC component, Man family K02795 manY; mannose PTS system EIIC component
D PEPE_1758 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D PEPE_1516 PTS system D-glucose-specific IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_1757 PTS system IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_0178 mannose-specific PTS system component IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D PEPE_0197 mannose-specific PTS system component IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D PEPE_0179 PTS system IID component, Man family K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D PEPE_0198 PTS system IID component, Man family K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D PEPE_0174 Phosphotransferase system, mannose/fructose-specific component IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PEPE_0171 transcriptional regulator, GntR family K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D PEPE_0172 N-acetylgalactosamine PTS, EIIC K10985 agaC; galactosamine PTS system EIIC component
D PEPE_0173 PTS system D-galactosamine-specific EIID component, Man family K10986 agaD; galactosamine PTS system EIID component
D PEPE_1197 glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PEPE_1164 PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIA component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PEPE_0142 PTS system D-fructose-specific IIA component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PEPE_1165 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:ppe03070]
D PEPE_1495 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PEPE_0463 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PEPE_0063 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1398 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1268 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D PEPE_0716 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_1845 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_0428 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0062 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0844 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PEPE_0846 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ppe02020]
D PEPE_0432 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PEPE_0431 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PEPE_0433 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D PEPE_1792 Trypsin-like serine protease with PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D PEPE_1796 PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PEPE_1797 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K07668 vicR; two-component system, OmpR family, response regulator VicR
D PEPE_0001 DNA replication ATPase initiation K02313 dnaA; chromosomal replication initiator protein
D PEPE_1590 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PEPE_1589 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D PEPE_1588 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PEPE_1587 D-alanyl transfer protein K03740 dltD; D-alanine transfer protein
D PEPE_0715 Signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PEPE_0714 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PEPE_0695 Membrane signal transduction histidine kinase, contains HAMP domain K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D PEPE_0696 Response regulator of the LytR/AlgR family K07705 lytT; two-component system, LytTR family, response regulator LytT
D PEPE_0697 Putative effector of murein hydrolase LrgA K05338 lrgA; holin-like protein
D PEPE_0698 Putative effector of murein hydrolase K05339 lrgB; holin-like protein LrgB
D PEPE_0083 Predicted signal transduction protein with a C-terminal ATPase domain K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D PEPE_0084 Response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D PEPE_1734 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PEPE_1733 DNA-binding response regulator (Rec-wHTH domains) K07693 desR; two-component system, NarL family, response regulator DesR
D PEPE_0739 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PEPE_0457 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D PEPE_1632 Rec (receiver) domain signal transduction protein K07719 glnL; two-component system, response regulator GlnL
D PEPE_0597 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ppe02024]
D PEPE_1638 Autoinducer AI2 synthesis LuxS-like protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PEPE_0190 agmatine:putrescine antiporter, APC superfamily K20265 gadC; glutamate:GABA antiporter
D PEPE_0117 hypothetical protein K20276 bapA; large repetitive protein
D PEPE_0118 Adhesion exoprotein K20276 bapA; large repetitive protein
D PEPE_1820 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PEPE_0254 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PEPE_0083 Predicted signal transduction protein with a C-terminal ATPase domain K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D PEPE_0084 Response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D PEPE_1584 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0396 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0397 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D PEPE_0398 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D PEPE_0399 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D PEPE_0400 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D PEPE_0085 bacteriocin-processing peptidase, Cysteine peptidase, MEROPS family C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D PEPE_1050 transcriptional regulator K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D PEPE_0143 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D PEPE_0716 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_1845 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_1495 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PEPE_0463 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PEPE_0063 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1398 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1268 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D PEPE_0428 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0062 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0844 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PEPE_0846 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:ppe02040]
D PEPE_1099 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PEPE_0457 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PEPE_0462 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ppe01501]
D PEPE_1584 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0396 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0397 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D PEPE_0398 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D PEPE_0399 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D PEPE_0400 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D PEPE_0055 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PEPE_1658 ABC-type multidrug transport system, ATPase and permease component K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PEPE_0931 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PEPE_0672 Membrane carboxypeptidase (penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:ppe01502]
D PEPE_1302 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PEPE_1559 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PEPE_1562 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PEPE_1188 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PEPE_1186 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppe01503]
D PEPE_1117 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PEPE_1792 Trypsin-like serine protease with PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D PEPE_1590 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PEPE_1589 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D PEPE_1588 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PEPE_1587 D-alanyl transfer protein K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ppe01000]
C 01001 Protein kinases [BR:ppe01001]
D PEPE_0832 Serine/threonine protein kinase with beta-lactam (PASTA) domains K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PEPE_0566 Tyrosine-protein kinase (capsular polysaccharide biosynthesis) K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PEPE_0432 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PEPE_1796 PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PEPE_0715 Signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PEPE_1734 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PEPE_0695 Membrane signal transduction histidine kinase, contains HAMP domain K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D PEPE_0083 Predicted signal transduction protein with a C-terminal ATPase domain K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ppe01009]
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0831 Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ppe01002]
D PEPE_0940 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PEPE_1507 aminopeptidase C, Cysteine peptidase, MEROPS family C01B K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PEPE_0412 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PEPE_0085 bacteriocin-processing peptidase, Cysteine peptidase, MEROPS family C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D PEPE_1163 Cell wall-associated hydrolase with LysM domain K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PEPE_0148 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PEPE_1461 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PEPE_0478 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PEPE_0659 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PEPE_1566 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D PEPE_1455 dipeptidase A, Cysteine peptidase, MEROPS family C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PEPE_1747 dipeptidase A, Cysteine peptidase, MEROPS family C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PEPE_0913 dipeptidase A, Cysteine peptidase, MEROPS family C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PEPE_0170 dipeptidase A, Cysteine peptidase, MEROPS family C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PEPE_1581 Predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D PEPE_0419 Predicted metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D PEPE_0417 lysyl aminopeptidase, Metallo peptidase, MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PEPE_1633 oligopeptidase F, Metallo peptidase, MEROPS family M03B K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PEPE_0302 neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PEPE_0234 peptidase V, Metallo peptidase, MEROPS family M20A K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D PEPE_0111 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PEPE_1656 peptidase T, Metallo peptidase, MEROPS family M20B K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PEPE_0134 Metal-dependent amidase/aminoacylase/carboxypeptidase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D PEPE_0375 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PEPE_0596 PepS aminopeptidase, Metallo peptidase, MEROPS family M29 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D PEPE_1545 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PEPE_1564 Heat shock protein, Metallo peptidase, MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PEPE_0883 site-2 protease, Metallo peptidase, MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PEPE_1792 Trypsin-like serine protease with PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D PEPE_1715 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PEPE_0455 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PEPE_0380 dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S15 K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D PEPE_0870 Transcriptional regulator, xre family K01356 lexA; repressor LexA [EC:3.4.21.88]
D PEPE_1841 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PEPE_0379 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PEPE_1062 Periplasmic protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PEPE_0730 Membrane-associated serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D PEPE_0963 ATP dependent peptidase CodWX, CodW component, Threonine peptidase, MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:ppe01003]
D PEPE_0612 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D PEPE_0613 Glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D PEPE_0931 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PEPE_0672 Membrane carboxypeptidase (penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PEPE_1526 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PEPE_0224 Glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PEPE_0225 Glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PEPE_0067 Glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PEPE_0423 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PEPE_0105 Glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D PEPE_0126 Glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppe01005]
D PEPE_0423 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PEPE_1610 Glycosyltransferase related enzyme K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppe01011]
D PEPE_1570 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PEPE_0474 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PEPE_0686 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PEPE_1187 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PEPE_0660 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PEPE_1302 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PEPE_1559 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PEPE_1257 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PEPE_1188 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PEPE_1186 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PEPE_0644 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PEPE_0931 Membrane carboxypeptidase (penicillin-binding protein) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PEPE_0672 Membrane carboxypeptidase (penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PEPE_1189 Cell division protein FtsI/penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B
D PEPE_0727 cell elongation-specific peptidoglycan D,D-transpeptidase K21465 pbpA; penicillin-binding protein A
D PEPE_1715 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PEPE_1163 Cell wall-associated hydrolase with LysM domain K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PEPE_0148 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PEPE_1566 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D PEPE_0723 Predicted periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PEPE_1117 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ppe01004]
D PEPE_0857 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PEPE_0855 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PEPE_1511 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PEPE_0859 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PEPE_0903 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_1280 3-oxoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0858 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0026 Short-chain alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PEPE_0854 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PEPE_0861 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PEPE_0865 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PEPE_0840 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PEPE_0960 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PEPE_0873 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ppe01008]
D PEPE_0662 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:ppe01006]
D PEPE_0820 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PEPE_0881 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PEPE_0736 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:ppe01007]
D PEPE_1501 glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PEPE_0235 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PEPE_0256 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PEPE_1500 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PEPE_0669 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PEPE_0266 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PEPE_1179 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PEPE_1291 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PEPE_0645 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PEPE_1542 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PEPE_1115 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PEPE_0547 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PEPE_1116 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PEPE_1102 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PEPE_1101 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PEPE_1436 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PEPE_0884 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PEPE_0694 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PEPE_1263 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PEPE_0721 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PEPE_0722 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PEPE_0131 aromatic amino acid aminotransferase apoenzyme K00841 patA; aminotransferase [EC:2.6.1.-]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ppe00194]
D PEPE_1316 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PEPE_1317 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PEPE_1318 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PEPE_1319 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PEPE_1320 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PEPE_1321 ATP synthase F0 subcomplex B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PEPE_1322 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PEPE_1323 F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ppe03000]
D PEPE_0678 hypothetical protein K04453 MAX; Max protein
D PEPE_0532 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PEPE_0307 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PEPE_1166 lactose transport regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PEPE_1250 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PEPE_1700 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PEPE_0201 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PEPE_0520 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D PEPE_0157 transcriptional regulator, GntR family K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D PEPE_1805 transcriptional regulator, GntR family K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D PEPE_0280 transcriptional regulator, GntR family K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D PEPE_1777 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D PEPE_1527 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PEPE_1756 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PEPE_0175 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D PEPE_1753 Transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PEPE_0738 glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D PEPE_0060 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D PEPE_0386 Fe2+/Zn2+ uptake regulation protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D PEPE_0338 Fe2+/Zn2+ uptake regulation protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PEPE_0408 Crp-like transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PEPE_0670 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D PEPE_0028 transcriptional regulator, ArsR family K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D PEPE_0492 transcriptional regulator, PadR family K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D PEPE_1823 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D PEPE_1636 Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PEPE_1050 transcriptional regulator K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D PEPE_0292 Adenine/guanine phosphoribosyltransferase related PRPP-binding protein K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D PEPE_0195 Transcriptional regulator containing an AAA-type ATPase domain and a DNA-binding domain K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D PEPE_1470 AT-rich DNA-binding protein K01926 rex; redox-sensing transcriptional repressor
D PEPE_1829 Predicted transcriptional regulator K07729 K07729; putative transcriptional regulator
D PEPE_0078 transcriptional antiterminator, BglG family K03488 licT; beta-glucoside operon transcriptional antiterminator
D PEPE_0582 transcriptional antiterminator, BglG family K03491 licR; probable licABCH operon transcriptional regulator
D PEPE_1723 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PEPE_0671 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D PEPE_0822 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D PEPE_0894 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PEPE_0561 Putative transcription activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PEPE_1428 Transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response
D PEPE_0458 central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D PEPE_0942 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PEPE_0691 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains K07738 nrdR; transcriptional repressor NrdR
D PEPE_1192 hypothetical protein, MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ppe03021]
D PEPE_1728 Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PEPE_1392 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PEPE_1426 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PEPE_1425 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PEPE_1572 DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D PEPE_0826 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PEPE_1099 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PEPE_1497 RNA polymerase, sigma 30 subunit, SigH K27000 sigH; RNA polymerase sigma-H factor
D PEPE_0457 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor
D PEPE_0887 Transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA
D PEPE_0816 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D PEPE_1494 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PEPE_0725 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PEPE_1340 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PEPE_1569 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ppe03019]
D PEPE_0842 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PEPE_1162 RNase J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PEPE_1145 Predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PEPE_1448 Predicted membrane-associated HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PEPE_1275 Predicted membrane-associated HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PEPE_0464 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PEPE_0676 Predicted HD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D PEPE_1561 Superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PEPE_1264 Superfamily II DNA and RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D PEPE_0562 ATP-dependent DNA helicase, RecQ-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PEPE_1082 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PEPE_0462 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PEPE_1569 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PEPE_1093 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PEPE_0896 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D PEPE_0421 Chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PEPE_0450 Predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:ppe03011]
D PEPE_1079 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D PEPE_0877 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D PEPE_1412 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D PEPE_1297 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D PEPE_1401 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D PEPE_0007 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D PEPE_1421 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D PEPE_1404 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D PEPE_1385 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D PEPE_1419 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D PEPE_1393 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D PEPE_1422 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D PEPE_1394 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D PEPE_0222 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PEPE_1405 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D PEPE_1146 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D PEPE_0847 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D PEPE_1409 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D PEPE_0009 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D PEPE_1414 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D PEPE_1147 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D PEPE_1109 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D PEPE_1492 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D PEPE_1415 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D PEPE_1418 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D PEPE_1417 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D PEPE_1406 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D PEPE_1403 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D PEPE_0011 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D PEPE_1491 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D PEPE_1493 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D PEPE_1490 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D PEPE_1386 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D PEPE_1408 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D PEPE_1399 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D PEPE_1411 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D PEPE_1391 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D PEPE_1402 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D PEPE_0850 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D PEPE_0701 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D PEPE_0811 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D PEPE_1413 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D PEPE_1416 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D PEPE_1407 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D PEPE_0813 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D PEPE_0836 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D PEPE_1410 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D PEPE_1400 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D PEPE_1568 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D PEPE_0712 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D PEPE_1496 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D PEPE_0728 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D PEPE_1847 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D PEPE_0700 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D PEPE_1395 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D PEPE_r1221 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r1537 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0110 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0238 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0619 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r1223 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r1541 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0236 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0618 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1538 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r0237 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r0109 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1222 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ppe03009]
D PEPE_0842 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PEPE_1104 GTPase K03595 era; GTPase
D PEPE_1134 Predicted GTPase K03979 obgE; GTPase [EC:3.6.5.-]
D PEPE_0887 Transcription elongation factor K02600 nusA; transcription termination/antitermination protein NusA
D PEPE_0816 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D PEPE_1494 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PEPE_0647 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PEPE_0269 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PEPE_0830 tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PEPE_1486 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PEPE_1153 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PEPE_1122 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PEPE_1724 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PEPE_1191 SAM-dependent methyltransferase for cell envelope biogenesis K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PEPE_1477 Predicted methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PEPE_0821 Predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PEPE_1784 23S rRNA m(1)G-748 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PEPE_1498 rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PEPE_1831 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PEPE_1366 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PEPE_1084 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PEPE_0941 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PEPE_0354 Pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PEPE_1450 Pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PEPE_1201 Pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PEPE_1473 Acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PEPE_0848 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PEPE_1123 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PEPE_1261 RNase H-like ribonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PEPE_1499 Ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D PEPE_1561 Superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PEPE_1264 Superfamily II DNA and RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D PEPE_0833 Predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PEPE_0972 Ras superfamily GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D PEPE_0395 GTPase K03665 hflX; GTPase
D PEPE_0704 Predicted GTPase K06948 yqeH; 30S ribosome assembly GTPase
D PEPE_1328 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PEPE_1120 Guanosine polyphosphate pyrophosphohydrolase/synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PEPE_0891 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PEPE_0886 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PEPE_0003 S4-like RNA binding protein K14761 rlbA; ribosome-associated protein
D PEPE_0708 Iojap family protein K09710 ybeB; ribosome-associated protein
D PEPE_1106 Predicted metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D PEPE_0705 RNA-binding protein, KH domain K07574 yhbY; RNA-binding protein
D PEPE_0427 SSU ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor
D PEPE_1721 Predicted GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase
D PEPE_0711 Predicted metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ppe03016]
D PEPE_1132 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PEPE_1072 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PEPE_0884 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PEPE_1179 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PEPE_0645 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PEPE_0266 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PEPE_0669 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PEPE_1542 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PEPE_1115 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PEPE_1263 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PEPE_0547 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PEPE_0694 Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PEPE_1436 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PEPE_1500 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PEPE_1291 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PEPE_1116 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PEPE_0721 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PEPE_0722 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PEPE_0235 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PEPE_0256 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PEPE_1119 D-Tyr-tRNAtyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PEPE_0679 Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PEPE_0682 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PEPE_1387 Pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PEPE_0892 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PEPE_1174 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1294 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1328 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PEPE_0736 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PEPE_1844 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PEPE_1843 tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PEPE_1846 RNase P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PEPE_r0935 RNA_RNaseP_classB K01978 rnpB; M1 RNA
D PEPE_1102 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PEPE_1101 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PEPE_1501 glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PEPE_0351 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PEPE_1485 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PEPE_1543 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PEPE_0849 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PEPE_1098 Predicted SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D PEPE_1195 Predicted rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PEPE_0718 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D PEPE_1172 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PEPE_1270 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PEPE_1269 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PEPE_1293 Thiamine biosynthesis ATP pyrophosphatase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PEPE_1547 tRNA(Ile)-lysidine synthetase, MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PEPE_1474 Metal-dependent protease-like protein, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PEPE_1472 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PEPE_0470 Predicted ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PEPE_0710 Predicted nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D PEPE_0464 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:ppe03012]
D PEPE_0890 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D PEPE_0699 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D PEPE_0878 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D PEPE_1143 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D PEPE_1420 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D PEPE_1330 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D PEPE_0880 ribosome recycling factor K02838 frr; ribosome recycling factor
D PEPE_1329 Methylase of polypeptide chain release factor K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PEPE_1553 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PEPE_1396 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D PEPE_0814 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D PEPE_1244 translation initiation factor 5A precursor (eIF-5A) K02356 efp; elongation factor P
D PEPE_0430 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D PEPE_0603 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ppe03110]
D PEPE_1096 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PEPE_1427 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PEPE_0607 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D PEPE_0976 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D PEPE_1141 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PEPE_0962 ATP-dependent protease HslVU (ClpYQ), ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PEPE_0896 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D PEPE_0421 Chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PEPE_0897 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D PEPE_1544 Disulfide bond chaperones of the HSP33 family K04083 hslO; molecular chaperone Hsp33
D PEPE_0895 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D PEPE_1643 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D PEPE_0420 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D PEPE_1792 Trypsin-like serine protease with PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D PEPE_1545 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PEPE_1323 F0F1-type ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PEPE_0211 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PEPE_0677 Parvulin-like peptidyl-prolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D PEPE_1258 Thiol-disulfide isomerase and thioredoxin K03671 TXN; thioredoxin
D PEPE_0373 Thiol-disulfide isomerase and thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:ppe04131]
D PEPE_1051 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PEPE_1644 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PEPE_0459 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PEPE_1710 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1092 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ppe03032]
D PEPE_0304 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PEPE_0532 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PEPE_1077 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D PEPE_0001 DNA replication ATPase initiation K02313 dnaA; chromosomal replication initiator protein
D PEPE_0012 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PEPE_0760 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PEPE_1018 DNA replication protein K02315 dnaC; DNA replication protein DnaC
D PEPE_1100 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PEPE_0692 replicative DNA helicase loader DnaB K03346 dnaB; replication initiation and membrane attachment protein
D PEPE_0693 replicative DNA helicase loader DnaI K11144 dnaI; primosomal protein DnaI
D PEPE_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0758 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1021 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1094 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PEPE_0885 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PEPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PEPE_1148 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PEPE_1479 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PEPE_0472 DNA polymerase III, epsilon subunit related 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PEPE_1484 DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PEPE_0971 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PEPE_0688 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PEPE_1612 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PEPE_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PEPE_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PEPE_0958 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PEPE_0959 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PEPE_0965 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ppe03036]
D PEPE_0678 hypothetical protein K04453 MAX; Max protein
D PEPE_0532 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PEPE_0842 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PEPE_1077 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D PEPE_0001 DNA replication ATPase initiation K02313 dnaA; chromosomal replication initiator protein
D PEPE_1382 DNA-binding ferritin-like protein (oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein
D PEPE_0843 condensin subunit Smc K03529 smc; chromosome segregation protein
D PEPE_1086 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D PEPE_1085 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D PEPE_1184 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PEPE_1549 Septum formation initiator K13052 divIC; cell division protein DivIC
D PEPE_1194 DNA segregation ATPase FtsK/SpoIIIE related protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PEPE_0685 DNA segregation ATPase FtsK/SpoIIIE related protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PEPE_1190 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PEPE_1185 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PEPE_1155 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW
D PEPE_1183 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PEPE_1117 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PEPE_1295 Negative regulator of septation ring formation K06286 ezrA; septation ring formation regulator
D PEPE_1180 Cell division initiation protein K04074 divIVA; cell division initiation protein
D PEPE_1288 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PEPE_1287 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PEPE_1312 cell division membrane protein K05837 rodA; rod shape determining protein RodA
D PEPE_1723 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PEPE_0958 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PEPE_0959 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PEPE_1843 tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PEPE_1724 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PEPE_0964 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC
D PEPE_1088 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD
D PEPE_1140 Predicted GTPase K03978 engB; GTP-binding protein
D PEPE_0452 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ppe03400]
D PEPE_0469 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PEPE_1728 Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PEPE_1504 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PEPE_1718 Methylated DNA-protein cysteine methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PEPE_1836 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PEPE_1301 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PEPE_0689 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PEPE_1613 Exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PEPE_1111 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PEPE_1130 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PEPE_1612 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PEPE_0688 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PEPE_0449 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PEPE_0448 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PEPE_1135 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PEPE_1372 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0404 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_0255 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PEPE_1426 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PEPE_1425 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PEPE_1392 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PEPE_1572 DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D PEPE_0826 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PEPE_1552 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PEPE_1274 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PEPE_1259 MutS family ATPase K07456 mutS2; DNA mismatch repair protein MutS2
D PEPE_1273 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PEPE_0818 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PEPE_0819 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PEPE_1094 DNA polymerase III catalytic subunit, DnaE type K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PEPE_0885 DNA polymerase III catalytic subunit, PolC type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PEPE_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PEPE_1148 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PEPE_1479 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PEPE_0472 DNA polymerase III, epsilon subunit related 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PEPE_1484 DNA polymerase III, gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PEPE_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0758 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1021 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1169 ATP-dependent DNA helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PEPE_1276 RecA protein K03553 recA; recombination protein RecA
D PEPE_1272 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PEPE_1271 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PEPE_0828 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PEPE_1503 DNA replication and repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PEPE_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PEPE_0839 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PEPE_1103 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PEPE_1482 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D PEPE_0823 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PEPE_0932 Penicillin-binding protein-related factor A, putative recombinase K03700 recU; recombination protein U
D PEPE_1832 DNA helicase/exodeoxyribonuclease V, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PEPE_1833 DNA helicase/exodeoxyribonuclease V, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PEPE_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PEPE_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PEPE_0965 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PEPE_1077 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D PEPE_0562 ATP-dependent DNA helicase, RecQ-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PEPE_1082 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PEPE_1266 Nucleotidyltransferase/DNA polymerase for DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PEPE_1243 Nucleotidyltransferase/DNA polymerase for DNA repair K03502 umuC; DNA polymerase V
D PEPE_0870 Transcriptional regulator, xre family K01356 lexA; repressor LexA [EC:3.4.21.88]
D PEPE_0599 hypothetical protein, RecX family K03565 recX; regulatory protein
D PEPE_0928 Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PEPE_1488 ribonucleoside-diphosphate reductase class Ib alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PEPE_1489 ribonucleoside-diphosphate reductase class Ib beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PEPE_1265 Phosphoesterase, DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ppe03029]
D PEPE_0890 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D PEPE_0699 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D PEPE_0878 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D PEPE_1143 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D PEPE_1420 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D PEPE_1104 GTPase K03595 era; GTPase
D PEPE_0235 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PEPE_0645 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PEPE_1115 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PEPE_0669 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PEPE_1369 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PEPE_1368 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PEPE_1370 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PEPE_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0758 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_1021 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PEPE_0896 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D PEPE_0895 Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D PEPE_0421 Chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PEPE_0420 Co-chaperonin GroES (HSP10) K04078 groES; chaperonin GroES
D PEPE_0897 DnaJ-class molecular chaperone with C-terminal Zn finger domain K03686 dnaJ; molecular chaperone DnaJ
D PEPE_1174 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1294 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_0716 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_1845 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ppe02000]
D PEPE_1658 ABC-type multidrug transport system, ATPase and permease component K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PEPE_1337 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PEPE_1336 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PEPE_0085 bacteriocin-processing peptidase, Cysteine peptidase, MEROPS family C39 K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D PEPE_0016 ATPase component of ABC transporter with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D PEPE_1071 ATPase component of ABC transporter with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D PEPE_0242 ABC-type proline/glycine betaine transport system, permease and substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PEPE_1653 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein
D PEPE_1652 glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05846 opuBD; osmoprotectant transport system permease protein
D PEPE_1654 glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D PEPE_1655 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PEPE_0243 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PEPE_0333 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PEPE_0433 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D PEPE_0434 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein
D PEPE_0435 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein
D PEPE_0436 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PEPE_0437 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PEPE_1068 amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family K10036 glnH; glutamine transport system substrate-binding protein
D PEPE_1067 amino acid ABC transporter ATP-binding protein, PAAT family K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_0390 amino acid ABC transporter substrate-binding protein, PAAT family K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D PEPE_0391 amino acid ABC transporter membrane protein 1, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PEPE_0392 amino acid ABC transporter membrane protein 2, PAAT family K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PEPE_0389 amino acid ABC transporter ATP-binding protein, PAAT family K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_1137 amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family K17077 artQ; arginine/lysine/histidine transport system permease protein
D PEPE_1136 amino acid ABC transporter ATP-binding protein, PAAT family K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_1309 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D PEPE_1310 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D PEPE_1311 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D PEPE_0279 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PEPE_0278 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PEPE_0277 ABC-type uncharacterized transport system, ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PEPE_1284 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PEPE_1286 amino acid ABC transporter membrane protein, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein
D PEPE_1285 amino acid ABC transporter ATP-binding protein, PAAT family K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PEPE_1584 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0396 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D PEPE_0397 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D PEPE_0398 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15582 oppC; oligopeptide transport system permease protein
D PEPE_0399 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D PEPE_0400 ABC-type oligopeptide transport system, ATPase component K10823 oppF; oligopeptide transport system ATP-binding protein
D PEPE_1592 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PEPE_1637 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D PEPE_1388 ABC-type cobalt transport system, permease component CbiQ related transporter K16785 ecfT; energy-coupling factor transport system permease protein
D PEPE_1390 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PEPE_1389 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PEPE_0289 ABC-type metal ion transport system, periplasmic component/surface adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PEPE_0086 ABC-type metal ion transport system, periplasmic component/surface adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PEPE_0291 ABC-type Mn2+/Zn2+ transport system, permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PEPE_0290 ABC-type Mn/Zn transport system, ATPase component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PEPE_1607 ABC-type polysaccharide/polyol phosphate export system, permease component K09692 tagG; teichoic acid transport system permease protein
D PEPE_1606 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D PEPE_0681 Predicted ABC-type exoprotein transport system, permease component K25157 ecsB; ABC-2 type transport system permease protein
D PEPE_0680 ABC-type multidrug transport system, ATPase component K25158 ecsA; ABC-2 type transport system ATP-binding protein
D PEPE_1735 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PEPE_1680 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D PEPE_0053 Uncharacterized ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PEPE_1681 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PEPE_1307 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PEPE_1736 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PEPE_0018 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PEPE_1813 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PEPE_1744 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PEPE_1650 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PEPE_1324 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D PEPE_1743 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PEPE_0019 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PEPE_1325 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PEPE_0486 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PEPE_1580 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D PEPE_1055 D-xylose proton-symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D PEPE_0552 glycerol-3-phosphatase transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D PEPE_0139 Cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PEPE_1731 permease of the major facilitator superfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PEPE_1635 permease of the major facilitator superfamily K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PEPE_1567 permease of the major facilitator superfamily K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PEPE_0275 permease of the major facilitator superfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D PEPE_0339 permease of the major facilitator superfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D PEPE_0213 permease of the major facilitator superfamily K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PEPE_0610 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PEPE_0609 Phosphotransferase system, HPr-related protein K02784 ptsH; phosphocarrier protein HPr
D PEPE_0077 PTS system IIA component, Glc family K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PEPE_1816 PTS system N-acetylglucosamine-specific IIB component, Glc family / PTS system N-acetylglucosamine-specific IIA component, Glc family / PTS system N-acetylglucosamine-specific IIC component, Glc family K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PEPE_1042 PTS system IIA component, Glc family / PTS system IIB component, Glc family / PTS system IIC component, Glc family K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PEPE_0518 PTS system sucrose-specific IIC component, Glc family / PTS system sucrose-specific IIB component, Glc family / PTS system sucrose-specific IIA component, Glc family K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PEPE_1804 PTS system IIC component, Glc family / PTS system IIB component, Glc family / PTS system IIA component, Glc family K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PEPE_0079 PTS system IIB component, Glc family / PTS system IIC component, Glc family K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PEPE_1164 PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIA component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PEPE_0142 PTS system D-fructose-specific IIA component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family / PTS system D-fructose-specific IIB component (F1P-forming), Frc family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PEPE_0282 cellobiose-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PEPE_0580 cellobiose-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PEPE_0281 cellobiose-specific PTS system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PEPE_0578 cellobiose-specific PTS system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PEPE_0091 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0579 Phosphotransferase system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D PEPE_1775 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0231 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_0023 cellobiose-specific PTS system IIC component K02761 celB; cellobiose PTS system EIIC component
D PEPE_1598 Phosphotransferase system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D PEPE_1197 glucitol/sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PEPE_1518 PTS system D-glucose-specific IIB component, Man family / PTS system D-glucose-specific IIA component, Man family K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1513 Phosphotransferase system, mannose/fructose-specific component IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PEPE_1761 Phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PEPE_1517 PTS system D-glucose-specific IIC component, Man family K02795 manY; mannose PTS system EIIC component
D PEPE_1758 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D PEPE_1516 PTS system D-glucose-specific IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_1757 PTS system IID component, Man family K02796 manZ; mannose PTS system EIID component
D PEPE_0178 mannose-specific PTS system component IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D PEPE_0197 mannose-specific PTS system component IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D PEPE_0179 PTS system IID component, Man family K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D PEPE_0198 PTS system IID component, Man family K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D PEPE_0174 Phosphotransferase system, mannose/fructose-specific component IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D PEPE_0171 transcriptional regulator, GntR family K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D PEPE_0172 N-acetylgalactosamine PTS, EIIC K10985 agaC; galactosamine PTS system EIIC component
D PEPE_0173 PTS system D-galactosamine-specific EIID component, Man family K10986 agaD; galactosamine PTS system EIID component
D PEPE_1660 dihydroxyacetone kinase DhaM subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PEPE_0299 Glycerol uptake facilitator related permease (Major Intrinsic Protein Family) K06188 aqpZ; aquaporin Z
D PEPE_1625 Glycerol uptake facilitator related permease (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator
D PEPE_1249 Glycerol uptake facilitator related permease K02440 glpF; glycerol uptake facilitator
D PEPE_1691 Glycerol uptake facilitator related permease (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator
D PEPE_0300 Kef-type K+ transport system, predicted NAD-binding component K10716 kch; voltage-gated potassium channel
D PEPE_1812 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PEPE_1255 Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D PEPE_1200 Transcriptional regulator with CBS domains K06213 mgtE; magnesium transporter
D PEPE_0145 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter
D PEPE_0371 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter
D PEPE_0948 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D PEPE_0923 Predicted integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D PEPE_0544 Predicted integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D PEPE_0346 Hemolysin related protein with CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PEPE_0697 Putative effector of murein hydrolase LrgA K05338 lrgA; holin-like protein
D PEPE_0203 PTS system IIA component, Glc family K16209 lacS; lactose/raffinose/galactose permease
D PEPE_0512 PTS system IIA component, Glc family K16209 lacS; lactose/raffinose/galactose permease
D PEPE_0968 permease of the major facilitator superfamily K16211 malY; maltose/moltooligosaccharide transporter
D PEPE_1438 lysine:proton symporter, AAT family K11733 lysP; lysine-specific permease
D PEPE_1627 arginine:ornithine antiporter, APA family K03758 arcD; arginine:ornithine antiporter / lysine permease
D PEPE_1628 arginine:ornithine antiporter, APA family K03758 arcD; arginine:ornithine antiporter / lysine permease
D PEPE_0190 agmatine:putrescine antiporter, APC superfamily K20265 gadC; glutamate:GABA antiporter
D PEPE_0951 Membrane transporter of cations and cationic drugs K03297 emrE; small multidrug resistance pump
D PEPE_0032 Membrane transporter of cations and cationic drugs K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PEPE_1351 Putative glucose uptake permease K05340 glcU; glucose uptake protein
D PEPE_1697 ribose transport protein K06216 rbsU; putative ribose uptake protein
D PEPE_0254 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PEPE_1360 gluconate permease GntP K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PEPE_0039 Na+/H+-dicarboxylate symporter K11102 gltP; proton glutamate symport protein
D PEPE_1838 putative tyrosine permease, NhaC family K03315 nhaC; Na+:H+ antiporter, NhaC family
D PEPE_0364 sodium/proton antiporter, CPA1 family K24163 nhaK; monovalent cation/hydrogen antiporter
D PEPE_1810 sodium/proton antiporter, CPA1 family K24163 nhaK; monovalent cation/hydrogen antiporter
D PEPE_0245 sodium/proton antiporter NapA, CPA2 family K26730 napA; Na+:H+ antiporter
D PEPE_1124 Xanthine/uracil permease K02824 uraA; uracil permease
D PEPE_1835 Xanthine/uracil permease K16169 pbuX; xanthine permease
D PEPE_1454 Xanthine/uracil permease K16169 pbuX; xanthine permease
D PEPE_0303 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PEPE_0381 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PEPE_1727 Nucleoside permease K16323 yxjA; purine nucleoside transport protein
D PEPE_1622 Chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D PEPE_1696 High-affinity nickel permease K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D PEPE_1701 Mn2+ and Fe2+ transporter of the NRAMP family K03322 mntH; manganese transport protein
D PEPE_0045 Mn2+ and Fe2+ transporter of the NRAMP family K03322 mntH; manganese transport protein
D PEPE_0160 C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PEPE_1616 Malate permease K24180 mleP; malate permease and related proteins
D PEPE_0309 Auxin efflux carrier (AEC) family permease K24180 mleP; malate permease and related proteins
D PEPE_1714 Predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D PEPE_1713 Predicted membrane protein K26606 azlD; branched chain amino acid efflux pump
D PEPE_1593 Predicted membrane protein K23675 fmnP; riboflavin transporter
D PEPE_1451 hypothetical protein K23675 fmnP; riboflavin transporter
D PEPE_0043 Uncharacterized membrane protein K22736 VIT; vacuolar iron transporter family protein
D PEPE_0044 Uncharacterized membrane protein K22736 VIT; vacuolar iron transporter family protein
D PEPE_0554 Multiple antibiotic transporter K05595 marC; multiple antibiotic resistance protein
D PEPE_1155 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW
D PEPE_0566 Tyrosine-protein kinase (capsular polysaccharide biosynthesis) K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PEPE_0565 Capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D PEPE_0058 Nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D PEPE_0899 Tryptophan-rich sensory protein K05770 TSPO; translocator protein
D PEPE_0150 Putative Mg2+ Transporter-C (MgtC) Family K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:ppe02044]
D PEPE_1182 Cell division membrane protein K02221 yggT; YggT family protein
D PEPE_1151 DNA uptake protein related DNA-binding protein K02237 comEA; competence protein ComEA
D PEPE_1150 Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PEPE_1149 Predicted hydrolase (metallo-beta-lactamase superfamily) K02238 comEC; competence protein ComEC
D PEPE_0425 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) K02240 comFA; competence protein ComFA
D PEPE_0426 Predicted amidophosphoribosyltransferase K02242 comFC; competence protein ComFC
D PEPE_1238 Type II secretory pathway/competence component, ATPase K02243 comGA; competence protein ComGA
D PEPE_1237 Type II secretory pathway/competence component K02244 comGB; competence protein ComGB
D PEPE_1236 Competence protein ComGC K02245 comGC; competence protein ComGC
D PEPE_1235 hypothetical protein K02246 comGD; competence protein ComGD
D PEPE_0428 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_0062 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PEPE_1495 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D PEPE_0463 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PEPE_0063 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_1398 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D PEPE_0846 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PEPE_0844 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PEPE_1268 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D PEPE_0716 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_1845 Preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PEPE_0064 hypothetical protein K12268 asp1; accessory secretory protein Asp1
D PEPE_0065 hypothetical protein K12269 asp2; accessory secretory protein Asp2
D PEPE_0066 hypothetical protein K12270 asp3; accessory secretory protein Asp3
C 02042 Bacterial toxins [BR:ppe02042]
D PEPE_0346 Hemolysin related protein with CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PEPE_0037 Predicted membrane protein, hemolysin III related protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ppe02022]
D PEPE_0432 Signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PEPE_0431 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PEPE_1796 PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PEPE_1797 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K07668 vicR; two-component system, OmpR family, response regulator VicR
D PEPE_0715 Signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PEPE_0714 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PEPE_1354 DNA-binding response regulator, OmpR family (Rec-wHTH domains) K02483 K02483; two-component system, OmpR family, response regulator
D PEPE_1734 Signal transduction histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PEPE_1733 DNA-binding response regulator (Rec-wHTH domains) K07693 desR; two-component system, NarL family, response regulator DesR
D PEPE_0695 Membrane signal transduction histidine kinase, contains HAMP domain K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D PEPE_0696 Response regulator of the LytR/AlgR family K07705 lytT; two-component system, LytTR family, response regulator LytT
D PEPE_0083 Predicted signal transduction protein with a C-terminal ATPase domain K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D PEPE_0084 Response regulator of the LytR/AlgR family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D PEPE_1632 Rec (receiver) domain signal transduction protein K07719 glnL; two-component system, response regulator GlnL
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ppe04812]
D PEPE_1183 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PEPE_1184 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PEPE_1723 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ppe04147]
D PEPE_0462 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PEPE_0459 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PEPE_0460 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PEPE_1092 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PEPE_0421 Chaperonin GroEL (HSP60 family) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PEPE_0896 Molecular chaperone K04043 dnaK; molecular chaperone DnaK
D PEPE_1350 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PEPE_1719 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PEPE_1143 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D PEPE_0679 Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PEPE_1554 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_0218 malate dehydrogenase (NAD) K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PEPE_1397 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PEPE_1129 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PEPE_0206 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PEPE_0113 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PEPE_1623 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PEPE_0739 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PEPE_1458 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PEPE_1770 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PEPE_1267 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PEPE_0461 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PEPE_1710 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PEPE_1510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ppe02048]
D PEPE_1231 Adenine-specific DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D PEPE_0532 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PEPE_1007 Restriction endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PEPE_1365 Restriction endonuclease K07448 mrr; restriction system protein
D PEPE_1557 Toxin-antitoxin addiction module toxin component MazF (an endoRNAse) K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PEPE_1183 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PEPE_0958 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PEPE_0959 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PEPE_1174 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PEPE_1294 Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:ppe04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ppe04090]
C 01504 Antimicrobial resistance genes [BR:ppe01504]
D PEPE_0016 ATPase component of ABC transporter with duplicated ATPase domains K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D PEPE_0055 Beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D PEPE_1590 D-alanine-activating enzyme K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PEPE_1589 D-alanyl transfer protein K03739 dltB; membrane protein involved in D-alanine export
D PEPE_1588 D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PEPE_1587 D-alanyl transfer protein K03740 dltD; D-alanine transfer protein
D PEPE_1658 ABC-type multidrug transport system, ATPase and permease component K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ppe03100]
D PEPE_t0098 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PEPE_t0617 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PEPE_t1539 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PEPE_t0808 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t0456 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t0625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t1430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t0594 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PEPE_t1220 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PEPE_t1536 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PEPE_t0631 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PEPE_t0638 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PEPE_t1216 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PEPE_t1211 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PEPE_t1342 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PEPE_t1530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PEPE_t0636 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PEPE_t1218 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PEPE_t1341 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PEPE_t0633 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t0623 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t1431 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t0665 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PEPE_t1213 tRNA-His K14226 tRNA-His; tRNA His
D PEPE_t0616 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PEPE_t1540 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PEPE_t0634 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PEPE_t0624 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1212 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t0656 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1433 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1519 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PEPE_t1798 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PEPE_t0621 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PEPE_t0627 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0630 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0637 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0628 tRNA-Met K14230 tRNA-Met; tRNA Met
D PEPE_t0632 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PEPE_t1215 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PEPE_t0626 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PEPE_t1429 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PEPE_t0629 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t0635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t1128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t1219 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PEPE_t0239 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t1432 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t0622 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t1535 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PEPE_t1214 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PEPE_t1531 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PEPE_t0620 tRNA-Val K14237 tRNA-Val; tRNA Val
D PEPE_t1434 tRNA-Val K14237 tRNA-Val; tRNA Val
D PEPE_t1217 tRNA-Val K14237 tRNA-Val; tRNA Val
D PEPE_r1223 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0108 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r1541 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0236 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PEPE_r0618 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1538 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r0237 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r0109 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1222 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PEPE_r1221 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r1537 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0110 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0238 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0619 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PEPE_r0935 RNA_RNaseP_classB K01978 rnpB; M1 RNA
D PEPE_s0541 PEPE_s0541 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PEPE_0075 Aldo/keto reductase of diketogulonate reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PEPE_1620 Aryl-alcohol dehydrogenase related enzyme K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D PEPE_0112 Predicted oxidoreductase, aryl-alcohol dehydrogenase related protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PEPE_0922 L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D PEPE_0061 Aryl-alcohol dehydrogenase related enzyme K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D PEPE_0920 Predicted dinucleotide-binding enzyme K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D PEPE_0586 Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PEPE_0953 Peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PEPE_0954 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PEPE_1619 Uncharacterized NAD(FAD)-dependent dehydrogenase K05910 npr; NADH peroxidase [EC:1.11.1.1]
D PEPE_1788 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D PEPE_0906 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D PEPE_0611 Alpha/beta superfamily hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PEPE_1292 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PEPE_0366 Thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PEPE_0485 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PEPE_1712 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D PEPE_0936 Predicted N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D PEPE_0189 putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D PEPE_1677 spermine/spermidine N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D PEPE_1640 Galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PEPE_1052 Acetyltransferase, GNAT family K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PEPE_0548 Acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D PEPE_1693 NCAIR mutase (PurE)-related protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D PEPE_0442 Prolipoprotein diacylglyceryltransferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PEPE_1349 Thiamine biosynthesis membrane-associated lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PEPE_0141 Fructose-1-phosphate kinase related fructose-6-phosphate kinase (PfkB) K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D PEPE_0838 Dihydroxyacetone kinase related enzyme K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D PEPE_1110 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PEPE_0475 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PEPE_0441 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PEPE_1762 hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D PEPE_0564 Beta-lactamase class C related penicillin binding protein K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D PEPE_0343 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PEPE_0567 Capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PEPE_0342 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PEPE_0703 Predicted hydrolase of the HAD superfamily K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D PEPE_0010 Signaling protein (consists of PAS, a modified GGDEF and a DHH family phosphatase domains) K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D PEPE_0267 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PEPE_0268 RNAse M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D PEPE_0184 Alpha-glucosidase, family 31 of glycosyl hydrolase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D PEPE_0453 N-acetylmuramidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PEPE_1159 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PEPE_1676 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PEPE_0648 Predicted sugar kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D PEPE_1690 ATP-utilizing enzyme of the PP-loop superfamily K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D PEPE_1692 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D PEPE_0661 Predicted ATP-grasp enzyme K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D PEPE_1645 Cation transport ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D PEPE_1523 Cation transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PEPE_0411 Cation transport ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PEPE_0489 Fe-S cluster formation protein, NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PEPE_0528 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, related enzyme K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D PEPE_0947 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D PEPE_1066 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D PEPE_1783 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D PEPE_0344 Ribonucleotide reduction protein K03647 nrdI; protein involved in ribonucleotide reduction
D PEPE_0663 DNA-entry nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D PEPE_0326 Lactoylglutathione lyase related lyase K08234 yaeR; glyoxylase I family protein
C 99986 Glycan metabolism
D PEPE_0614 Predicted integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D PEPE_0027 Predicted flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PEPE_1178 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D PEPE_1445 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D PEPE_1032 Uncharacterized phage-encoded protein K07741 antB; anti-repressor protein
D PEPE_1207 Arsenate reductase related protein, glutaredoxin family K16509 spxA; regulatory protein spx
D PEPE_1521 Transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D PEPE_1224 RNA binding protein (S1 domain) K07570 GSP13; general stress protein 13
D PEPE_1548 RNA binding protein (S1 domain) K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D PEPE_1142 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D PEPE_0465 SsrA-binding protein K03664 smpB; SsrA-binding protein
D PEPE_1487 ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit K06191 nrdH; glutaredoxin-like protein NrdH
D PEPE_1206 Negative regulator of genetic competence, sporulation and motility K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D PEPE_1289 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC
D PEPE_1746 DNA-3-methyladenine glycosylase III K07457 K07457; endonuclease III related protein
D PEPE_0875 URI-like endonuclease K07461 K07461; putative endonuclease
D PEPE_0970 Rossmann fold nucleotide-binding protein for DNA uptake K04096 smf; DNA processing protein
D PEPE_0930 DNA replication protein DnaD K02086 dnaD; DNA replication protein
D PEPE_1298 Recombination protein MgsA K07478 ycaJ; putative ATPase
D PEPE_0498 Transposase, IS30 family K07482 K07482; transposase, IS30 family
D PEPE_0523 Transposase K07483 K07483; transposase
D PEPE_0524 Transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PEPE_1483 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PEPE_1230 D-serine/D-alanine/glycine:proton symporter, AAT family K03293 TC.AAT; amino acid transporter, AAT family
D PEPE_0867 amino acid/polyamine/organocation transporter, APC superfamily K03293 TC.AAT; amino acid transporter, AAT family
D PEPE_0382 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PEPE_1304 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PEPE_0584 serine/threonine exchange transporter, LAT family K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PEPE_1639 Choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PEPE_1534 Dipeptide/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PEPE_0240 Purine-cytosine permease related protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PEPE_0210 Di- and tricarboxylate transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D PEPE_1551 Polysaccharide transport membrane protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D PEPE_1156 Stress response membrane GTPase K06207 typA; GTP-binding protein
D PEPE_1107 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D PEPE_0587 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
C 99994 Others
D PEPE_0438 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D PEPE_1199 Copper resistance protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PEPE_0473 Predicted dehydrogenase related protein K03810 mviM; virulence factor
D PEPE_1205 Competence protein K06198 coiA; competence protein CoiA
D PEPE_0684 EMAP domain K06878 K06878; tRNA-binding protein
D PEPE_0328 Predicted membrane protein K06994 K06994; putative drug exporter of the RND superfamily
D PEPE_0490 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PEPE_0487 Fe-S cluster assembly ABC-type transport system, permease component K09015 sufD; Fe-S cluster assembly protein SufD
D PEPE_0340 Ribonuclease BN-like family enzyme K07058 K07058; membrane protein
D PEPE_1565 hypothetical protein K03744 lemA; LemA protein
D PEPE_1520 Zinc-dependent metalloprotease K03095 sprL; SprT-like protein
D PEPE_1225 Uncharacterized membrane-associated protein K03975 dedA; membrane-associated protein
D PEPE_0360 Uncharacterized membrane-associated protein K03975 dedA; membrane-associated protein
D PEPE_1780 Predicted membrane protein K01421 yhgE; putative membrane protein
D PEPE_0440 Predicted membrane protein K08972 K08972; putative membrane protein
D PEPE_0014 Predicted membrane protein K08987 K08987; putative membrane protein
C 99997 Function unknown
D PEPE_1574 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein
D PEPE_0363 hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D PEPE_0099 hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D PEPE_1600 hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D PEPE_0687 Integral membrane protein, interacts with FtsH K06890 K06890; uncharacterized protein
D PEPE_1447 Predicted HD superfamily hydrolase K06950 K06950; uncharacterized protein
D PEPE_0719 Predicted HD superfamily hydrolase K06950 K06950; uncharacterized protein
D PEPE_1505 Predicted acetyltransferase K06975 K06975; uncharacterized protein
D PEPE_1044 Predicted acyl esterase K06978 K06978; uncharacterized protein
D PEPE_0499 Pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein K07006 K07006; uncharacterized protein
D PEPE_0226 Predicted oxidoreductase K07078 K07078; uncharacterized protein
D PEPE_0605 Predicted permease K07090 K07090; uncharacterized protein
D PEPE_0015 Predicted permease K07090 K07090; uncharacterized protein
D PEPE_0214 Predicted small molecule binding protein (contains 3H domain) K07105 K07105; uncharacterized protein
D PEPE_0329 Putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D PEPE_1131 Short-chain dehydrogenase of various substrate specificities K07124 K07124; uncharacterized protein
D PEPE_0248 Uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein
D PEPE_1314 hypothetical protein K08998 K08998; uncharacterized protein
D PEPE_0853 hypothetical protein K09004 K09004; uncharacterized protein
D PEPE_1108 GatB/YqeY domain protein K09117 K09117; uncharacterized protein
D PEPE_0898 hypothetical protein K09779 K09779; uncharacterized protein
D PEPE_0845 hypothetical protein K09787 K09787; uncharacterized protein
D PEPE_1827 hypothetical protein K09790 K09790; uncharacterized protein
D PEPE_1089 RNA-binding protein, S1-like domain K00243 K00243; uncharacterized protein
D PEPE_1842 hypothetical protein K09861 K09861; uncharacterized protein
D PEPE_0155 hypothetical protein K09955 K09955; uncharacterized protein
D PEPE_0230 hypothetical protein K09963 K09963; uncharacterized protein
D PEPE_0872 hypothetical protein K09976 K09976; uncharacterized protein
D PEPE_0812 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D PEPE_0600 Uncharacterized domain/protein associated with RNase G and E K07586 ygaC; uncharacterized protein
D PEPE_0888 Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 19, 2024