+D GENES KO
#
KEGG Orthology (KO) - Pelodictyon phaeoclathratiforme
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pph00010]
D Ppha_0335 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Ppha_1515 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_2207 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Ppha_1362 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Ppha_1779 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Ppha_1091 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Ppha_2906 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Ppha_0780 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Ppha_2689 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Ppha_0629 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_0695 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Ppha_2670 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Ppha_2671 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Ppha_1044 HAD-superfamily hydrolase, subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D Ppha_0050 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:pph00020]
D Ppha_2417 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Ppha_1393 ATP-citrate lyase/succinyl-CoA ligase K15230 aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
D Ppha_1392 ATP-grasp domain protein K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
D Ppha_0851 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Ppha_2213 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Ppha_2010 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Ppha_2011 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_2670 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Ppha_2671 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Ppha_0435 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Ppha_0776 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Ppha_2304 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Ppha_2852 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2717 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2851 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2716 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2853 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_2715 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_1569 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Ppha_1568 Oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Ppha_0050 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Ppha_0695 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pph00030]
D Ppha_1515 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Ppha_2483 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Ppha_2482 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Ppha_2484 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Ppha_0651 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Ppha_1190 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Ppha_1173 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Ppha_2875 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Ppha_1359 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Ppha_1914 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Ppha_1642 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Ppha_2333 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Ppha_1362 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Ppha_2207 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:pph00040]
D Ppha_1502 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Ppha_0651 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:pph00051]
D Ppha_2919 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Ppha_2289 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Ppha_0423 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Ppha_0319 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Ppha_2761 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Ppha_0571 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Ppha_0589 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Ppha_0570 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_2207 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Ppha_1362 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Ppha_1779 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Ppha_1359 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Ppha_0392 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:pph00052]
D Ppha_2290 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Ppha_2597 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Ppha_0335 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:pph00053]
D Ppha_1502 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Ppha_1748 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:pph00500]
D Ppha_0330 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Ppha_2598 glycosyl transferase group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D Ppha_0722 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Ppha_2782 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Ppha_2783 alpha amylase catalytic region K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D Ppha_0335 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Ppha_1515 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Ppha_2919 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pph00520]
D Ppha_2813 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Ppha_0178 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Ppha_2919 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Ppha_0083 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Ppha_0407 Nucleotidyl transferase K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D Ppha_2760 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Ppha_0854 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Ppha_1301 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Ppha_1574 N-acylneuraminate-9-phosphate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D Ppha_0623 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Ppha_1093 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Ppha_0558 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Ppha_0528 UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D Ppha_0527 N-acylneuraminate-9-phosphate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D Ppha_0335 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Ppha_1502 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Ppha_2290 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Ppha_2597 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Ppha_1748 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Ppha_1515 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Ppha_0423 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Ppha_2761 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Ppha_0319 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Ppha_2289 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Ppha_0571 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Ppha_0589 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Ppha_0525 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Ppha_0570 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:pph00620]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Ppha_0695 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Ppha_2670 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Ppha_2671 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1915 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Ppha_2672 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_1169 acetyl-CoA carboxylase alpha subunit-like protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_2676 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Ppha_2677 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Ppha_2384 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Ppha_0920 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_2304 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Ppha_0863 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Ppha_1089 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Ppha_0944 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Ppha_1568 Oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Ppha_1569 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Ppha_0683 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Ppha_0050 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Ppha_0629 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Ppha_0204 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Ppha_2174 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Ppha_2177 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Ppha_1919 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pph00630]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Ppha_2417 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Ppha_0851 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Ppha_1170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Ppha_1167 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1168 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1684 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Ppha_1437 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Ppha_2334 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Ppha_1767 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Ppha_0727 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Ppha_0698 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Ppha_0179 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Ppha_2360 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_0697 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Ppha_2199 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pph00640]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Ppha_1171 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Ppha_1915 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_2672 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_1169 acetyl-CoA carboxylase alpha subunit-like protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_2676 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Ppha_2677 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Ppha_2384 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Ppha_1170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Ppha_1167 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1168 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_0776 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Ppha_0435 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Ppha_0851 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Ppha_1252 Methylglyoxal synthase-like protein K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D Ppha_1046 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:pph00650]
D Ppha_0944 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Ppha_0945 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Ppha_0946 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Ppha_2852 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2717 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2851 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2716 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2853 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_2715 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_2399 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Ppha_2304 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D Ppha_0695 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Ppha_2670 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Ppha_2671 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Ppha_2168 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Ppha_2171 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pph00660]
D Ppha_2168 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Ppha_2171 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Ppha_0776 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Ppha_0435 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Ppha_2175 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Ppha_2176 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Ppha_2173 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pph00562]
D Ppha_0661 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Ppha_1779 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pph00190]
D Ppha_1873 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Ppha_1872 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Ppha_1871 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Ppha_1870 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Ppha_1869 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Ppha_1868 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Ppha_1867 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Ppha_1866 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Ppha_1865 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Ppha_1864 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Ppha_1863 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Ppha_0737 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Ppha_2852 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2717 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2851 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2716 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2853 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_2715 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_2074 cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Ppha_2075 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Ppha_2077 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Ppha_1477 C-type cytochrome, putative K08738 CYC; cytochrome c
D Ppha_1322 hypothetical protein K08738 CYC; cytochrome c
D Ppha_2705 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Ppha_0048 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Ppha_2704 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Ppha_2882 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Ppha_0047 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Ppha_2885 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Ppha_2883 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Ppha_2884 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Ppha_1577 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Ppha_1358 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pph00710]
D Ppha_2334 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Ppha_2906 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Ppha_1091 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Ppha_1362 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Ppha_2207 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Ppha_1190 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Ppha_1173 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Ppha_1359 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Ppha_1779 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Ppha_0651 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Ppha_2875 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Ppha_0683 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Ppha_0629 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pph00720]
D Ppha_0695 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Ppha_0629 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Ppha_0683 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Ppha_1568 Oxaloacetate decarboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Ppha_1569 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Ppha_2852 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2717 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Ppha_2851 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2716 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Ppha_2853 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_2715 CoB--CoM heterodisulfide reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Ppha_0435 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Ppha_0776 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Ppha_2670 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Ppha_2671 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Ppha_2213 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Ppha_0851 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Ppha_1393 ATP-citrate lyase/succinyl-CoA ligase K15230 aclA; ATP-citrate lyase alpha-subunit [EC:2.3.3.8]
D Ppha_1392 ATP-grasp domain protein K15231 aclB; ATP-citrate lyase beta-subunit [EC:2.3.3.8]
D Ppha_2672 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_1169 acetyl-CoA carboxylase alpha subunit-like protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_2676 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Ppha_2677 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Ppha_2384 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Ppha_1170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Ppha_1167 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1168 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1205 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Ppha_1647 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Ppha_1915 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pph00680]
D Ppha_0727 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Ppha_2689 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Ppha_0683 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Ppha_1362 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Ppha_2207 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0954 Glutamate synthase (NADPH) K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D Ppha_1306 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Ppha_1307 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Ppha_1305 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Ppha_1915 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Ppha_0780 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Ppha_1520 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Ppha_2664 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pph00910]
D Ppha_1952 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Ppha_1953 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Ppha_1949 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Ppha_0149 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Ppha_0779 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Ppha_1767 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Ppha_0781 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Ppha_0782 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Ppha_0493 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:pph00920]
D Ppha_0241 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Ppha_0041 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Ppha_1506 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Ppha_0039 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Ppha_0040 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Ppha_0814 sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Ppha_0811 sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Ppha_0812 twin-arginine translocation pathway signal K17226 soxY; sulfur-oxidizing protein SoxY
D Ppha_0009 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D Ppha_0813 Sulphur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Ppha_0010 Sulphur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D Ppha_0816 5'-Nucleotidase domain protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Ppha_2321 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Ppha_2320 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Ppha_2319 4Fe-4S ferredoxin iron-sulfur binding domain protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D Ppha_2313 Nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D Ppha_2312 DsrK protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D Ppha_2311 conserved hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D Ppha_2310 4Fe-4S ferredoxin iron-sulfur binding domain protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D Ppha_1347 sulfide-quinone reductase, putative K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Ppha_0012 Flavocytochrome c sulphide dehydrogenase flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Ppha_0810 Flavocytochrome c sulphide dehydrogenase flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Ppha_0011 cytochrome c class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D Ppha_1211 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D Ppha_0912 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D Ppha_0941 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_1005 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_1012 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_2000 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Ppha_0921 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Ppha_0930 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Ppha_2001 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Ppha_2110 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pph00061]
D Ppha_2672 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_1169 acetyl-CoA carboxylase alpha subunit-like protein K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Ppha_2676 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Ppha_2677 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Ppha_2384 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Ppha_0196 acyl carrier protein K02078 acpP; acyl carrier protein
D Ppha_0198 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Ppha_0199 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Ppha_0871 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Ppha_0195 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Ppha_0577 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_0197 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_0660 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Ppha_2214 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Ppha_1487 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2833 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pph00071]
D Ppha_1487 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2833 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:pph00074]
D Ppha_2565 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Ppha_0196 acyl carrier protein K02078 acpP; acyl carrier protein
D Ppha_0198 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pph00561]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_1046 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D Ppha_2627 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Ppha_0200 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Ppha_2816 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Ppha_2708 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Ppha_1688 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:pph00564]
D Ppha_2815 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Ppha_2816 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Ppha_2708 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Ppha_1688 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Ppha_0210 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Ppha_1365 phospholipid N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D Ppha_0391 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Ppha_1627 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Ppha_0703 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Ppha_2224 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Ppha_2223 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Ppha_0659 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pph00230]
D Ppha_1642 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Ppha_2285 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Ppha_0647 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Ppha_2279 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Ppha_1310 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Ppha_1626 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Ppha_1625 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Ppha_2817 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Ppha_0739 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Ppha_1188 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Ppha_1212 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Ppha_2259 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Ppha_0460 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Ppha_2386 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Ppha_2072 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Ppha_2888 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Ppha_1790 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Ppha_0339 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Ppha_2249 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Ppha_1762 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Ppha_2644 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Ppha_0404 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Ppha_0876 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Ppha_2622 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Ppha_2365 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Ppha_0501 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Ppha_2821 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Ppha_0322 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Ppha_2208 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Ppha_1510 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Ppha_0723 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Ppha_1878 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Ppha_0041 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:pph00240]
D Ppha_0649 Carbamoyl-phosphate synthase L chain ATP-binding K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Ppha_0725 Carbamoyl-phosphate synthetase large chain domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Ppha_0218 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Ppha_2055 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Ppha_1356 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Ppha_0721 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Ppha_2575 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Ppha_2806 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Ppha_0082 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Ppha_2351 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Ppha_0339 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Ppha_1527 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Ppha_0097 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Ppha_0451 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Ppha_2386 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Ppha_2208 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Ppha_2622 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Ppha_0876 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Ppha_1891 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Ppha_1611 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Ppha_1773 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Ppha_2383 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pph00250]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_0858 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Ppha_2150 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Ppha_1378 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Ppha_1367 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Ppha_0322 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Ppha_1212 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Ppha_2055 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Ppha_2399 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Ppha_0781 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Ppha_0782 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Ppha_0493 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Ppha_1767 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Ppha_0649 Carbamoyl-phosphate synthase L chain ATP-binding K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Ppha_0725 Carbamoyl-phosphate synthetase large chain domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Ppha_0218 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Ppha_1625 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Ppha_0083 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Ppha_2285 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pph00260]
D Ppha_2818 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Ppha_2703 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Ppha_2559 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Ppha_2706 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Ppha_2707 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Ppha_0727 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Ppha_0780 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Ppha_1520 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Ppha_2664 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Ppha_2789 Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Ppha_0698 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Ppha_0179 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Ppha_2360 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_0697 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Ppha_1627 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Ppha_2553 Cysteine synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Ppha_0840 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Ppha_0827 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Ppha_2615 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pph00270]
D Ppha_0941 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_1005 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_1012 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_2000 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Ppha_0921 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Ppha_2553 Cysteine synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D Ppha_2463 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Ppha_2094 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Ppha_2888 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Ppha_2073 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Ppha_2869 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0676 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_2095 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Ppha_2818 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Ppha_2703 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Ppha_2559 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Ppha_2706 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Ppha_0930 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Ppha_2001 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Ppha_2110 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Ppha_0929 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Ppha_0716 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_1029 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Ppha_1520 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:pph00280]
D Ppha_0716 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1170 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Ppha_1167 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1168 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pph00290]
D Ppha_2175 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Ppha_2176 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Ppha_2173 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Ppha_2168 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Ppha_2171 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Ppha_2172 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Ppha_2167 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Ppha_0716 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Ppha_0204 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Ppha_2174 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Ppha_2177 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pph00300]
D Ppha_2818 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Ppha_2703 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Ppha_2559 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Ppha_0699 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Ppha_2437 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Ppha_0026 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Ppha_0734 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Ppha_2694 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Ppha_1648 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Ppha_0068 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Ppha_2898 UDP-N-acetylmuramyl-tripeptide synthetase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
C 00310 Lysine degradation [PATH:pph00310]
D Ppha_2011 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_2399 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:pph00220]
D Ppha_1380 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Ppha_1378 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Ppha_1367 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Ppha_1625 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Ppha_1767 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Ppha_0649 Carbamoyl-phosphate synthase L chain ATP-binding K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Ppha_0725 Carbamoyl-phosphate synthetase large chain domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Ppha_0218 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_0253 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Ppha_1382 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Ppha_1381 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Ppha_1383 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Ppha_0734 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pph00330]
D Ppha_0860 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Ppha_0880 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Ppha_1695 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Ppha_1028 Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Ppha_1026 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Ppha_0879 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_0212 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Ppha_1101 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Ppha_1100 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pph00340]
D Ppha_0371 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Ppha_0486 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Ppha_0496 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Ppha_0532 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Ppha_0495 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Ppha_0998 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Ppha_0531 histidine biosynthesis protein K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Ppha_2087 Imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D Ppha_1156 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Ppha_0948 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D Ppha_0849 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:pph00350]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_1156 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Ppha_2399 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:pph00360]
D Ppha_0073 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_1156 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Ppha_0100 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:pph00380]
D Ppha_2011 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_0100 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pph00400]
D Ppha_1519 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Ppha_1764 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Ppha_1210 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Ppha_1763 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Ppha_2550 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Ppha_0942 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Ppha_1783 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Ppha_2391 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Ppha_0709 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Ppha_2096 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Ppha_0650 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Ppha_0840 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Ppha_0827 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Ppha_2615 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Ppha_2807 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Ppha_0656 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_1156 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pph00410]
D Ppha_0408 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_0667 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:pph00430]
D Ppha_2150 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Ppha_1915 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pph00450]
D Ppha_2001 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Ppha_2110 Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Ppha_2463 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Ppha_1544 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Ppha_0041 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Ppha_1197 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Ppha_0727 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pph00470]
D Ppha_2554 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Ppha_1631 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Ppha_1625 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Ppha_0449 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Ppha_2896 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Ppha_2694 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Ppha_1648 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pph00480]
D Ppha_1505 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Ppha_1584 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Ppha_2213 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Ppha_2484 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Ppha_2483 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Ppha_0879 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D Ppha_0641 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:pph00540]
D Ppha_0334 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Ppha_0660 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Ppha_1641 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Ppha_0370 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Ppha_0443 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Ppha_0645 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Ppha_0436 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Ppha_2811 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Ppha_2810 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Ppha_1575 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Ppha_2414 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Ppha_0922 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Ppha_2601 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Ppha_2710 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Ppha_1494 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Ppha_0331 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Ppha_2602 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Ppha_1153 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pph00541]
D Ppha_2290 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Ppha_2597 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Ppha_1502 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Ppha_1748 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Ppha_2300 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2093 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2291 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Ppha_2299 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Ppha_2292 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Ppha_2289 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Ppha_0423 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Ppha_0319 Mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Ppha_0571 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Ppha_0589 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Ppha_0570 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Ppha_0525 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Ppha_1574 N-acylneuraminate-9-phosphate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D Ppha_0558 polysaccharide biosynthesis protein CapD K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Ppha_0559 NAD-dependent epimerase/dehydratase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D Ppha_0560 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D Ppha_0520 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D Ppha_0568 NAD-dependent epimerase/dehydratase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D Ppha_0623 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Ppha_1093 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:pph00550]
D Ppha_0854 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Ppha_1301 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Ppha_2893 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Ppha_2896 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Ppha_1631 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Ppha_2898 UDP-N-acetylmuramyl-tripeptide synthetase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
D Ppha_0433 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Ppha_2250 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Ppha_2897 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Ppha_2894 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Ppha_2700 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Ppha_2643 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Ppha_0864 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Ppha_2899 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Ppha_1148 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:pph00552]
D Ppha_2250 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Ppha_0520 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pph00543]
D Ppha_0562 putative acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D Ppha_2479 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Ppha_0941 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_1005 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Ppha_1012 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pph00730]
D Ppha_1778 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Ppha_1501 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Ppha_0365 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Ppha_2004 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Ppha_2222 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Ppha_2003 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Ppha_1499 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Ppha_1500 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Ppha_2612 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Ppha_1108 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Ppha_2400 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Ppha_1700 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Ppha_1510 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pph00740]
D Ppha_0726 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Ppha_1890 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Ppha_2709 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Ppha_1886 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Ppha_1263 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
C 00750 Vitamin B6 metabolism [PATH:pph00750]
D Ppha_0908 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Ppha_2248 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Ppha_2707 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pph00760]
D Ppha_0858 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Ppha_0868 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Ppha_2566 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Ppha_2072 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Ppha_2386 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Ppha_2880 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Ppha_0857 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Ppha_2808 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Ppha_2399 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pph00770]
D Ppha_2168 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Ppha_2171 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Ppha_2172 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Ppha_2167 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Ppha_1628 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Ppha_0667 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Ppha_1765 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Ppha_2604 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Ppha_1192 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Ppha_1537 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Ppha_2565 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Ppha_0716 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Ppha_0408 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:pph00780]
D Ppha_2836 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Ppha_0195 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Ppha_0577 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_0197 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_2214 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Ppha_2837 protein of unknown function DUF452 K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Ppha_2838 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Ppha_2579 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Ppha_2834 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Ppha_2835 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Ppha_2839 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Ppha_2840 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pph00785]
D Ppha_1629 biotin/lipoate A/B protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Ppha_1316 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_2010 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Ppha_2011 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Ppha_0698 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Ppha_0179 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Ppha_2360 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Ppha_0697 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pph00790]
D Ppha_1858 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Ppha_1700 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Ppha_2568 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Ppha_2569 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Ppha_0510 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Ppha_0426 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Ppha_0726 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Ppha_0502 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Ppha_0936 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Ppha_1857 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Ppha_0103 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Ppha_0933 short-chain dehydrogenase/reductase SDR K17745 spr1; sepiapterin reductase [EC:1.1.1.325]
D Ppha_2280 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Ppha_0838 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Ppha_0685 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Ppha_1339 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Ppha_1329 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Ppha_1330 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:pph00670]
D Ppha_1205 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Ppha_0727 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Ppha_2279 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Ppha_2259 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Ppha_1787 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Ppha_2360 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Ppha_2463 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Ppha_2383 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Ppha_2199 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Ppha_1647 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Ppha_1357 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pph00860]
D Ppha_0464 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Ppha_0951 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Ppha_2800 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Ppha_0943 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Ppha_0950 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Ppha_0949 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Ppha_2714 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Ppha_0740 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Ppha_2540 FAD dependent oxidoreductase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D Ppha_0488 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Ppha_2306 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Ppha_2307 porphyrin biosynthesis protein, putative K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Ppha_2323 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Ppha_1761 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Ppha_1267 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Ppha_1264 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Ppha_1266 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Ppha_1293 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Ppha_1295 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Ppha_1270 Xylose isomerase domain protein TIM barrel K25496 cbiR; adenosylcobalamin phosphodiesterase
D Ppha_1294 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Ppha_1265 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Ppha_2583 magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Ppha_1794 magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Ppha_2581 magnesium chelatase, H subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D Ppha_1795 magnesium chelatase ATPase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Ppha_1796 magnesium chelatase ATPase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Ppha_2584 magnesium protoporphyrin O-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D Ppha_2585 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D Ppha_1163 NmrA family protein K19073 DVR; divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]
D Ppha_2739 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13]
D Ppha_0328 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D Ppha_0326 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D Ppha_0324 light-independent protochlorophyllide reductase, N subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D Ppha_0325 light-independent protochlorophyllide reductase, B subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D Ppha_1145 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Ppha_0708 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Ppha_0979 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D Ppha_2411 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D Ppha_0177 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D Ppha_0981 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D Ppha_0980 chlorophyll synthesis pathway, BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D Ppha_0029 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D Ppha_1315 conserved hypothetical protein K21058 bciC; chlorophyllide a hydrolase [EC:3.1.1.100]
D Ppha_1617 Radical SAM domain protein K13602 bchR; bacteriochlorophyllide d C-12(1)-methyltransferase [EC:2.1.1.331]
D Ppha_2731 Radical SAM domain protein K13601 bchQ; bacteriochlorophyllide d C-8(2)-methyltransferase [EC:2.1.1.332]
D Ppha_2757 Radical SAM domain protein K13601 bchQ; bacteriochlorophyllide d C-8(2)-methyltransferase [EC:2.1.1.332]
D Ppha_2338 2-vinyl bacteriochlorophyllide hydratase K13603 bchV; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.169]
D Ppha_2749 2-vinyl bacteriochlorophyllide hydratase K13603 bchV; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.169]
D Ppha_2758 C-20 methyltransferase BchU K13604 bchU; bacteriochlorophyllide d C-20 methyltransferase [EC:2.1.1.333]
D Ppha_2752 C-20 methyltransferase BchU K13604 bchU; bacteriochlorophyllide d C-20 methyltransferase [EC:2.1.1.333]
D Ppha_0368 bacteriochlorophyll/chlorophyll synthetase K13605 bchK; bacteriochlorophyll c synthase [EC:2.5.1.-]
D Ppha_2747 conserved hypothetical protein K21312 bciD; bacteriochlorophyllide c C-7(1)-hydroxylase [EC:1.17.98.2]
D Ppha_0085 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pph00130]
D Ppha_0485 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Ppha_2422 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D Ppha_2423 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D Ppha_2432 alpha/beta hydrolase fold K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D Ppha_2434 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Ppha_2435 O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Ppha_2433 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Ppha_1616 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Ppha_1025 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pph00900]
D Ppha_2222 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Ppha_0080 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Ppha_1615 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Ppha_1063 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Ppha_0719 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Ppha_2687 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Ppha_0448 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Ppha_0414 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Ppha_0413 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Ppha_1534 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Ppha_0433 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Ppha_0029 geranylgeranyl reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D Ppha_1027 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:pph00906]
D Ppha_1732 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Ppha_1176 Carotene 7,8-desaturase K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5]
D Ppha_1769 Carotene 7,8-desaturase K00514 ZDS; zeta-carotene desaturase [EC:1.3.5.6]
D Ppha_2151 amine oxidase K09835 crtISO; prolycopene isomerase [EC:5.2.1.13]
D Ppha_0482 conserved hypothetical protein K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19]
D Ppha_2743 conserved hypothetical protein K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19]
D Ppha_2256 Rieske (2Fe-2S) domain protein K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40]
D Ppha_0465 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D Ppha_0372 glycosyl transferase family 2 K14597 cruC; chlorobactene glucosyltransferase
D Ppha_1194 phospholipid/glycerol acyltransferase K14598 cruD; chlorobactene lauroyltransferase
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Ppha_1190 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Ppha_1173 Transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pph00523]
D Ppha_2300 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2093 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2291 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Ppha_2299 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Ppha_2292 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Ppha_2422 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D Ppha_2291 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pph00332]
D Ppha_1101 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Ppha_1100 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pph00261]
D Ppha_0041 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Ppha_2818 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Ppha_2703 aspartate kinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D Ppha_2559 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Ppha_0699 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Ppha_2437 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pph00521]
D Ppha_0335 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Ppha_0661 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Ppha_2300 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2093 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2291 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Ppha_2299 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Ppha_2292 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Ppha_0335 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pph00525]
D Ppha_2300 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2093 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Ppha_2291 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pph00401]
D Ppha_2807 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_1156 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Ppha_1783 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Ppha_2391 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Ppha_0198 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Ppha_0577 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_0197 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_2214 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Ppha_0196 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Ppha_2094 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D Ppha_0944 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Ppha_0945 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Ppha_0946 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation
D Ppha_0920 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:pph00625]
D Ppha_2489 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Ppha_1953 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Ppha_1949 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Ppha_1952 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:pph00633]
D Ppha_1861 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Ppha_1862 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Ppha_2321 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Ppha_2320 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Ppha_2319 4Fe-4S ferredoxin iron-sulfur binding domain protein K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pph03020]
D Ppha_2679 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Ppha_2678 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Ppha_0316 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pph03010]
D Ppha_0452 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Ppha_2353 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Ppha_0295 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Ppha_0315 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Ppha_0306 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Ppha_0107 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Ppha_0285 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Ppha_0303 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Ppha_2354 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Ppha_0288 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Ppha_0314 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Ppha_0284 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Ppha_0313 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Ppha_0302 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Ppha_0402 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Ppha_1492 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Ppha_0298 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Ppha_0109 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Ppha_0293 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Ppha_0424 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Ppha_2551 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Ppha_2682 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Ppha_0292 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Ppha_0289 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Ppha_0290 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Ppha_0301 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Ppha_0304 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Ppha_2680 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Ppha_0110 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Ppha_2681 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Ppha_2683 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Ppha_2355 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Ppha_0299 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Ppha_0308 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Ppha_0296 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Ppha_0317 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Ppha_0305 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Ppha_1489 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Ppha_0173 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Ppha_1031 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Ppha_0294 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Ppha_0291 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Ppha_0300 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Ppha_1643 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Ppha_1030 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Ppha_0707 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Ppha_0297 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Ppha_0307 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Ppha_2402 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Ppha_0201 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Ppha_1649 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Ppha_2924 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Ppha_0174 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Ppha_0312 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Ppha_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pph00970]
D Ppha_R0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Ppha_R0050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Ppha_R0032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Ppha_R0019 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Ppha_R0048 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Ppha_R0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Ppha_R0021 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Ppha_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Ppha_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Ppha_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Ppha_R0045 tRNA-His K14226 tRNA-His; tRNA His
D Ppha_R0004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Ppha_R0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Ppha_R0024 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Ppha_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Ppha_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Ppha_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Ppha_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D Ppha_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met
D Ppha_R0017 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Ppha_R0030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Ppha_R0047 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Ppha_R0052 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Ppha_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Ppha_R0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Ppha_R0056 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Ppha_R0053 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Ppha_R0055 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Ppha_R0018 tRNA-Val K14237 tRNA-Val; tRNA Val
D Ppha_R0002 tRNA-Val K14237 tRNA-Val; tRNA Val
D Ppha_R0028 tRNA-Val K14237 tRNA-Val; tRNA Val
D Ppha_0464 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Ppha_0434 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Ppha_0250 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Ppha_2416 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Ppha_2668 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Ppha_1620 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Ppha_0030 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Ppha_0176 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Ppha_0931 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Ppha_0320 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Ppha_1197 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Ppha_1787 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Ppha_2381 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Ppha_0665 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Ppha_2287 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Ppha_1733 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Ppha_2879 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Ppha_1083 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Ppha_0393 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Ppha_0172 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Ppha_2091 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Ppha_0861 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Ppha_2877 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pph03060]
D Ppha_0309 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Ppha_2685 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Ppha_2085 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Ppha_0014 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Ppha_0013 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Ppha_0219 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Ppha_2921 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Ppha_1311 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Ppha_1493 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Ppha_2611 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Ppha_2756 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2574 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2570 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2215 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_1521 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_0702 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Ppha_1535 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Ppha_1785 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Ppha_2067 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pph04122]
D Ppha_0365 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Ppha_2324 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Ppha_2315 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Ppha_2316 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Ppha_2317 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Ppha_2461 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Ppha_1339 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Ppha_1329 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Ppha_2002 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pph03018]
D Ppha_2689 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Ppha_0666 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Ppha_2108 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Ppha_1911 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Ppha_0924 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Ppha_0514 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Ppha_1436 DEAD/DEAH box helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Ppha_0427 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Ppha_2088 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_2156 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Ppha_0834 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Ppha_1358 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Ppha_1213 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pph03030]
D Ppha_1670 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Ppha_1547 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Ppha_1622 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Ppha_0715 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Ppha_2577 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Ppha_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Ppha_2606 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Ppha_0728 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Ppha_2576 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0706 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Ppha_0018 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Ppha_0655 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Ppha_0483 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Ppha_0006 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
C 03410 Base excision repair [PATH:pph03410]
D Ppha_1313 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Ppha_0504 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Ppha_1488 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Ppha_2605 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Ppha_2282 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Ppha_0655 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Ppha_2206 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Ppha_0483 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pph03420]
D Ppha_2147 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Ppha_0831 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Ppha_0628 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Ppha_2366 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Ppha_2063 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Ppha_2219 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Ppha_0655 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Ppha_0483 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pph03430]
D Ppha_1033 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Ppha_2225 Smr protein/MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Ppha_2701 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Ppha_2219 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Ppha_2413 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Ppha_0251 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Ppha_2206 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Ppha_2576 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_1547 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Ppha_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Ppha_1622 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Ppha_2577 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Ppha_0715 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Ppha_1670 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Ppha_0483 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pph03440]
D Ppha_2206 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Ppha_2576 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Ppha_2799 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Ppha_1175 recombination protein RecR K06187 recR; recombination protein RecR
D Ppha_2561 recA protein K03553 recA; recombination protein RecA
D Ppha_0655 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Ppha_0425 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Ppha_0693 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Ppha_0658 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Ppha_2401 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1448 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_2209 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_0889 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1124 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_2241 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1455 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1428 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1433 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Ppha_1434 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Ppha_0989 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Ppha_1432 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Ppha_1425 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Ppha_1547 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Ppha_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Ppha_1622 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Ppha_2577 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Ppha_0715 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Ppha_1670 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Ppha_1511 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D Ppha_0641 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pph02010]
D Ppha_0241 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Ppha_1998 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Ppha_0475 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Ppha_1999 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein
D Ppha_0474 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Ppha_0473 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Ppha_1995 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Ppha_2254 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Ppha_2252 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Ppha_2253 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Ppha_1352 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Ppha_1530 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Ppha_0630 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Ppha_1529 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Ppha_1776 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1908 OmpA/MotB domain protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1682 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1681 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Ppha_1680 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Ppha_1679 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Ppha_2022 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_0480 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_1830 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_0479 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_1829 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_2016 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_0478 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_1828 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Ppha_2015 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Ppha_1827 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_2024 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_0477 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Ppha_1826 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Ppha_0205 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Ppha_0207 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Ppha_0206 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Ppha_0492 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Ppha_0491 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Ppha_0490 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Ppha_0421 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_1387 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_1388 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_0718 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_1099 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Ppha_0481 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Ppha_1901 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Ppha_2369 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Ppha_2546 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Ppha_2283 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Ppha_0907 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Ppha_0382 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Ppha_1057 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Ppha_0422 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Ppha_0635 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Ppha_0379 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Ppha_0378 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Ppha_0821 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Ppha_0822 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D Ppha_0770 ABC transporter related K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:pph02060]
D Ppha_2607 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Ppha_0254 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Ppha_0392 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:pph03070]
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0636 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Ppha_0635 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Ppha_0013 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Ppha_0014 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Ppha_2685 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Ppha_2085 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Ppha_0309 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Ppha_0219 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Ppha_2921 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Ppha_1311 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Ppha_2611 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Ppha_1493 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Ppha_0702 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Ppha_1535 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pph02020]
D Ppha_1702 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Ppha_1701 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Ppha_1700 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Ppha_1776 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1908 OmpA/MotB domain protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1682 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1782 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Ppha_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Ppha_2018 peptidase M15D VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Ppha_1089 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Ppha_0798 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Ppha_0799 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Ppha_0800 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Ppha_0803 Flp pilus assembly protein ATPase CpaE-like protein K02282 cpaE; pilus assembly protein CpaE
D Ppha_0804 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Ppha_0805 type II secretion system protein K12510 tadB; tight adherence protein B
D Ppha_0806 type II secretion system protein K12511 tadC; tight adherence protein C
D Ppha_0087 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Ppha_1767 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Ppha_1920 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D Ppha_1318 multi-sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Ppha_1207 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Ppha_1862 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Ppha_1861 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Ppha_1860 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Ppha_0229 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_1653 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_1298 PAS/PAC sensor signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_0872 histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1350 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1154 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1654 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1477 C-type cytochrome, putative K08738 CYC; cytochrome c
D Ppha_1322 hypothetical protein K08738 CYC; cytochrome c
D Ppha_2074 cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Ppha_2075 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Ppha_2077 cytochrome c class I K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_1011 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Ppha_0879 Orn/DAP/Arg decarboxylase 2 K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pph02024]
D Ppha_1783 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Ppha_2391 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Ppha_1519 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Ppha_2745 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D Ppha_2335 Fructose-bisphosphate aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D Ppha_2022 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_0480 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_1830 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_0479 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_1829 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_2016 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_0478 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_1828 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Ppha_2015 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Ppha_1827 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_2024 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_0477 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Ppha_1826 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Ppha_1487 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2833 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_1890 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Ppha_0121 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1119 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_0982 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Ppha_0691 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Ppha_0692 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Ppha_1644 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Ppha_2146 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Ppha_0669 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Ppha_2921 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Ppha_0013 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Ppha_2685 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Ppha_2085 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Ppha_0309 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Ppha_0219 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Ppha_1311 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Ppha_2611 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Ppha_1493 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pph02030]
D Ppha_0229 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_1653 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
C 02040 Flagellar assembly [PATH:pph02040]
D Ppha_2380 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D Ppha_1207 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Ppha_2689 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pph04980]
D Ppha_1166 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D Ppha_1167 methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_1168 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Ppha_2463 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pph01501]
D Ppha_2813 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Ppha_0178 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Ppha_1117 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0123 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_1676 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0487 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0122 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Ppha_0121 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1119 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_2643 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Ppha_0864 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Ppha_2899 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Ppha_1109 Beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:pph01502]
D Ppha_2018 peptidase M15D VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Ppha_1631 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Ppha_2554 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Ppha_2897 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Ppha_2894 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pph01503]
D Ppha_2841 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Ppha_1782 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Ppha_1117 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0123 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_1676 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0487 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0122 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0334 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pph01000]
C 01001 Protein kinases [BR:pph01001]
D Ppha_1077 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Ppha_1078 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Ppha_1533 PASTA domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Ppha_0266 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_1557 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_2046 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_2229 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_0261 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_1014 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Ppha_1516 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Ppha_0519 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Ppha_1007 exopolysaccharide biosynthesis-related uncharacterized protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Ppha_1702 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Ppha_1318 multi-sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Ppha_1427 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_1177 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_1825 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_0076 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_1298 PAS/PAC sensor signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_0872 histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1350 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1154 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1654 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pph01009]
D Ppha_2095 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_1573 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Ppha_1071 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Ppha_2664 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pph01002]
D Ppha_2067 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Ppha_0807 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Ppha_1859 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Ppha_1607 peptidase C14 caspase catalytic subunit p20 K22684 MCA1; metacaspase-1 [EC:3.4.22.-]
D Ppha_1762 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Ppha_2644 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Ppha_2476 NLP/P60 protein K13695 nlpC; probable lipoprotein NlpC
D Ppha_2285 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Ppha_0781 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Ppha_0083 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Ppha_2470 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D Ppha_0390 Abortive infection protein K07052 K07052; CAAX protease family protein
D Ppha_2868 Abortive infection protein K07052 K07052; CAAX protease family protein
D Ppha_2018 peptidase M15D VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Ppha_2260 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D Ppha_1505 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Ppha_1584 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Ppha_0310 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Ppha_0710 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Ppha_0081 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Ppha_0463 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Ppha_1027 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Ppha_1962 HtpX domain protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Ppha_0079 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Ppha_1782 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Ppha_1148 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Ppha_2382 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Ppha_2041 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Ppha_1368 peptidase S24 and S26 domain protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D Ppha_1785 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Ppha_0027 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Ppha_1497 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Ppha_1363 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Ppha_1366 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Ppha_0670 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Ppha_2907 Rhomboid family protein K07059 K07059; rhomboid family protein
D Ppha_0046 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Ppha_1208 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Ppha_2495 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:pph01003]
D Ppha_2691 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Ppha_0641 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Ppha_2485 glycosyl transferase group 1 K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D Ppha_2598 glycosyl transferase group 1 K16150 K16150; glycogen synthase [EC:2.4.1.11]
D Ppha_0330 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Ppha_2700 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Ppha_2643 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pph01005]
D Ppha_0334 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Ppha_0443 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Ppha_0660 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Ppha_1641 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Ppha_0370 metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Ppha_0645 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Ppha_2601 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Ppha_0922 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Ppha_2811 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Ppha_2414 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Ppha_2810 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Ppha_1575 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Ppha_0436 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Ppha_1494 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Ppha_2602 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Ppha_2710 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Ppha_0331 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Ppha_1153 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Ppha_0569 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pph01011]
D Ppha_0854 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Ppha_1301 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Ppha_2893 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Ppha_2896 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Ppha_2898 UDP-N-acetylmuramyl-tripeptide synthetase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
D Ppha_1631 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Ppha_2554 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Ppha_0449 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Ppha_0046 Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Ppha_2897 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Ppha_2894 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Ppha_2250 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Ppha_2643 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Ppha_0864 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Ppha_2899 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Ppha_1148 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Ppha_2700 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Ppha_2470 Peptidoglycan-binding domain 1 protein K21470 ycbB; L,D-transpeptidase YcbB
D Ppha_2018 peptidase M15D VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Ppha_2260 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D Ppha_1522 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Ppha_2905 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Ppha_2772 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Ppha_2856 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Ppha_2841 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pph01004]
D Ppha_0198 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Ppha_0199 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Ppha_0871 Beta-ketoacyl-acyl-carrier-protein synthase I K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Ppha_0195 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Ppha_0577 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_0197 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Ppha_0660 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D Ppha_2214 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Ppha_0664 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Ppha_1171 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D Ppha_1487 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2833 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_0200 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Ppha_2816 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Ppha_2708 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Ppha_1688 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pph01006]
D Ppha_0413 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Ppha_1534 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Ppha_0433 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Ppha_1732 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Ppha_1201 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Ppha_1025 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Ppha_1145 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Ppha_0708 bacteriochlorophyll/chlorophyll synthetase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D Ppha_0368 bacteriochlorophyll/chlorophyll synthetase K13605 bchK; bacteriochlorophyll c synthase [EC:2.5.1.-]
C 01007 Amino acid related enzymes [BR:pph01007]
D Ppha_0464 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Ppha_0861 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Ppha_2877 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Ppha_0320 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Ppha_2879 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Ppha_1197 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Ppha_2287 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Ppha_2381 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Ppha_0665 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Ppha_1733 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Ppha_1620 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Ppha_0393 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Ppha_0030 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Ppha_0931 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Ppha_1083 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Ppha_0176 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Ppha_2668 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Ppha_0172 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Ppha_2091 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Ppha_1193 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Ppha_1308 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D Ppha_1156 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Ppha_2789 Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Ppha_2838 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Ppha_2579 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Ppha_0734 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Ppha_2834 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Ppha_2800 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Ppha_0716 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Ppha_0502 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Ppha_1093 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Ppha_0525 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pph00194]
D Ppha_0467 Cytochrome b/b6 domain K02635 petB; cytochrome b6
D Ppha_0466 Plastoquinol--plastocyanin reductase K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D Ppha_0047 H+transporting two-sector ATPase delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Ppha_0048 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Ppha_2704 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Ppha_2705 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Ppha_2882 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Ppha_2883 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Ppha_2884 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Ppha_2885 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Ppha_2693 photosystem P840 reaction center, large subunit K08940 pscA; photosystem P840 reaction center large subunit
D Ppha_2692 4Fe-4S ferredoxin iron-sulfur binding domain protein K08941 pscB; photosystem P840 reaction center iron-sulfur protein
D Ppha_0684 photosystem P840 reaction center cytochrome c-551 K08942 pscC; photosystem P840 reaction center cytochrome c551
D Ppha_2157 photosystem P840 reaction center protein PscD K08943 pscD; photosystem P840 reaction center protein PscD
D Ppha_1059 bacteriochlorophyll A protein K08944 fmoA; bacteriochlorophyll A protein
D Ppha_2572 bacteriochlorophyll C binding protein K08945 csmA; chlorosome envelope protein A
D Ppha_1683 chlorosome envelope protein B K08946 csmB; chlorosome envelope protein B
D Ppha_2753 chlorosome envelope protein B K08946 csmB; chlorosome envelope protein B
D Ppha_2759 chlorosome envelope protein B K08946 csmB; chlorosome envelope protein B
D Ppha_2468 chlorosome envelope protein B K08946 csmB; chlorosome envelope protein B
D Ppha_2573 chlorosome envelope protein C K08947 csmC; chlorosome envelope protein C
D Ppha_2542 bacteriochlorophyll C binding protein K08949 csmE; chlorosome envelope protein E
D Ppha_1583 conserved hypothetical protein K08950 csmF; chlorosome envelope protein F
D Ppha_1772 chlorosome envelope protein H K08951 csmH; chlorosome envelope protein H
D Ppha_1728 ferredoxin K08952 csmI; chlorosome envelope protein I
D Ppha_2149 ferredoxin K08953 csmJ; chlorosome envelope protein J
D Ppha_2148 ferredoxin K08954 csmX; chlorosome envelope protein X
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pph03000]
D Ppha_2869 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0676 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_2545 transcriptional regulator, AraC family K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D Ppha_1116 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D Ppha_1768 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Ppha_2620 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Ppha_0101 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Ppha_2840 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Ppha_1840 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Ppha_1847 putative transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Ppha_1548 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Ppha_1597 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Ppha_0067 transcriptional regulator, NifA subfamily, Fis Family K15836 fhlA; formate hydrogenlyase transcriptional activator
D Ppha_1920 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D Ppha_1986 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Ppha_1996 TOBE domain protein K02019 modE; molybdate transport system regulatory protein
D Ppha_0164 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Ppha_1845 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Ppha_0975 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Ppha_1904 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D Ppha_1405 hypothetical protein K07726 K07726; putative transcriptional regulator
D Ppha_0605 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D Ppha_1271 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Ppha_2725 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Ppha_2438 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Ppha_1379 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Ppha_1086 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Ppha_2142 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Ppha_2286 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Ppha_2902 protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pph03021]
D Ppha_0316 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Ppha_2679 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Ppha_2678 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Ppha_2380 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D Ppha_0441 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Ppha_1207 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Ppha_0397 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Ppha_0505 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Ppha_2684 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Ppha_1021 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Ppha_1015 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Ppha_1017 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Ppha_1014 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Ppha_1516 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Ppha_2286 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Ppha_1781 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Ppha_0427 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pph03019]
D Ppha_1810 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Ppha_0025 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Ppha_0194 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Ppha_2088 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Ppha_1911 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Ppha_2108 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Ppha_0924 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Ppha_0514 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Ppha_1436 DEAD/DEAH box helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Ppha_2689 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Ppha_0666 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Ppha_0427 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Ppha_1461 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_0717 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Ppha_2156 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Ppha_0834 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Ppha_1358 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Ppha_1213 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:pph03011]
D Ppha_0452 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Ppha_2353 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Ppha_0295 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Ppha_0315 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Ppha_0306 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Ppha_0107 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Ppha_0285 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Ppha_0303 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Ppha_2354 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Ppha_0288 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Ppha_0314 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Ppha_0284 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Ppha_0313 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Ppha_0302 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Ppha_0402 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Ppha_1492 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Ppha_0298 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Ppha_0109 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Ppha_0293 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Ppha_0424 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Ppha_2551 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Ppha_2682 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Ppha_0292 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Ppha_0289 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Ppha_0290 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Ppha_0301 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Ppha_0304 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Ppha_0110 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Ppha_2681 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Ppha_2683 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Ppha_2680 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Ppha_2355 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Ppha_0299 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Ppha_0308 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Ppha_0296 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Ppha_0317 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Ppha_0305 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Ppha_1489 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Ppha_0173 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Ppha_1031 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Ppha_0294 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Ppha_0291 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Ppha_0300 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Ppha_1030 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Ppha_0707 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Ppha_0297 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Ppha_0307 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Ppha_2402 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Ppha_0201 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Ppha_1649 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Ppha_2924 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Ppha_0174 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Ppha_0312 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Ppha_1643 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Ppha_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pph03009]
D Ppha_0194 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Ppha_1810 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Ppha_0456 GTP-binding protein Era K03595 era; GTPase
D Ppha_0252 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Ppha_2286 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Ppha_0397 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Ppha_0505 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Ppha_2684 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Ppha_1172 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Ppha_0928 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Ppha_1191 Protein of unknown function methylase putative K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Ppha_0337 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Ppha_0318 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Ppha_2901 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Ppha_0668 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Ppha_0696 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Ppha_1157 tRNA/rRNA methyltransferase (SpoU) K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Ppha_1541 Protein of unknown function methylase putative K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Ppha_1508 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Ppha_2909 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Ppha_0497 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Ppha_1798 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Ppha_1491 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Ppha_1757 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Ppha_2820 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Ppha_0025 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D Ppha_2805 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Ppha_0924 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Ppha_1108 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Ppha_2400 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Ppha_2356 small GTP-binding protein K03977 engA; GTPase
D Ppha_1731 GTP-binding proten HflX K03665 hflX; GTPase
D Ppha_0499 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Ppha_2365 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Ppha_0399 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Ppha_0396 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Ppha_0095 iojap-like protein K09710 ybeB; ribosome-associated protein
D Ppha_1730 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Ppha_0689 conserved hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D Ppha_0450 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Ppha_0202 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pph03016]
D Ppha_0464 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Ppha_1083 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Ppha_2287 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Ppha_0665 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Ppha_1197 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Ppha_2879 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Ppha_1733 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Ppha_1620 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Ppha_2668 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Ppha_0030 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Ppha_0176 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Ppha_0931 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Ppha_0320 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Ppha_2381 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Ppha_0393 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Ppha_0172 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Ppha_2091 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Ppha_0861 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Ppha_2877 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Ppha_2845 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Ppha_1261 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Ppha_0362 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Ppha_1523 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Ppha_0400 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Ppha_0365 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Ppha_0499 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Ppha_1201 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Ppha_2779 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Ppha_0007 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Ppha_2923 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Ppha_R0059 RNA component of RNaseP K01978 rnpB; M1 RNA
D Ppha_2486 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Ppha_0777 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Ppha_2560 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Ppha_0367 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Ppha_0459 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Ppha_1490 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Ppha_1727 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Ppha_2492 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Ppha_2461 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Ppha_2324 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Ppha_2315 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Ppha_2316 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Ppha_2317 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Ppha_1614 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Ppha_0850 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Ppha_0838 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Ppha_0936 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Ppha_1857 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Ppha_2280 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Ppha_0685 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Ppha_2257 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Ppha_1756 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Ppha_0704 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Ppha_0091 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Ppha_0090 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Ppha_1911 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Ppha_0666 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Ppha_2777 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Ppha_0151 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Ppha_0420 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:pph03012]
D Ppha_0398 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Ppha_0175 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Ppha_0764 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Ppha_2352 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Ppha_0287 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Ppha_0286 translation elongation factor G K02355 fusA; elongation factor G
D Ppha_2690 small GTP-binding protein K02355 fusA; elongation factor G
D Ppha_0078 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Ppha_2403 ribosome recycling factor K02838 frr; ribosome recycling factor
D Ppha_1085 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Ppha_1159 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Ppha_0311 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Ppha_2675 translation elongation factor P K02356 efp; elongation factor P
D Ppha_2784 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Ppha_1579 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Ppha_1045 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pph03110]
D Ppha_2812 ATPase AAA-2 domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Ppha_0245 AAA ATPase central domain protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Ppha_2617 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Ppha_0784 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Ppha_1209 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Ppha_1573 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Ppha_2156 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Ppha_0834 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Ppha_1088 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Ppha_1087 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Ppha_2155 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Ppha_0774 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Ppha_1812 conserved hypothetical protein K13993 HSP20; HSP20 family protein
D Ppha_0833 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Ppha_0867 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Ppha_1782 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Ppha_0081 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Ppha_0463 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Ppha_2885 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Ppha_2053 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Ppha_2052 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Ppha_1338 cytoplasmic chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Ppha_2608 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Ppha_0015 SurA domain K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Ppha_1546 thioredoxin K03671 TXN; thioredoxin
D Ppha_1854 thioredoxin K03671 TXN; thioredoxin
D Ppha_1545 thioredoxin K03671 TXN; thioredoxin
D Ppha_2773 Protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:pph04131]
D Ppha_0339 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Ppha_1810 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Ppha_1390 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Ppha_2756 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2574 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2570 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2215 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_1521 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_1091 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Ppha_0780 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Ppha_1573 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Ppha_1624 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:pph04121]
C 03051 Proteasome [BR:pph03051]
D Ppha_1573 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pph03032]
D Ppha_0706 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Ppha_2869 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0676 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0461 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_2673 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_1426 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_1317 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Ppha_2606 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Ppha_0728 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Ppha_2576 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_1547 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Ppha_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Ppha_2577 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Ppha_0715 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Ppha_1670 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Ppha_1622 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Ppha_0018 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Ppha_0655 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Ppha_0483 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Ppha_0006 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Ppha_0096 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Ppha_0016 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Ppha_2842 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pph03036]
D Ppha_0641 TPR repeat-containing protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Ppha_2869 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0676 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0194 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Ppha_1064 histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Ppha_0461 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_2673 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_1426 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_1317 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Ppha_1768 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Ppha_2891 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Ppha_0907 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Ppha_2899 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Ppha_2359 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Ppha_2892 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Ppha_2895 cell cycle protein K03588 ftsW; cell division protein FtsW
D Ppha_2283 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Ppha_2890 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Ppha_2089 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D Ppha_2841 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Ppha_1117 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0123 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_1676 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0487 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0848 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Ppha_1921 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Ppha_0866 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Ppha_0457 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Ppha_2439 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Ppha_1125 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Ppha_1699 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Ppha_2438 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Ppha_0007 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Ppha_0318 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Ppha_0688 integrase family protein K03733 xerC; integrase/recombinase XerC
D Ppha_0927 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Ppha_2357 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Ppha_1247 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Ppha_0970 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Ppha_0321 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pph03400]
D Ppha_1115 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Ppha_1488 HhH-GPD family protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Ppha_1313 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Ppha_0504 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Ppha_2057 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Ppha_1227 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Ppha_1106 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Ppha_1773 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Ppha_2605 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Ppha_2282 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Ppha_2206 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Ppha_0483 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Ppha_0655 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Ppha_0831 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Ppha_0628 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Ppha_2366 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Ppha_2063 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Ppha_2219 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Ppha_2679 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Ppha_2678 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Ppha_0316 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Ppha_2147 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Ppha_1033 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Ppha_2225 Smr protein/MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Ppha_2701 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Ppha_2413 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Ppha_0251 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Ppha_1547 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Ppha_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Ppha_2577 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Ppha_0715 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Ppha_1670 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Ppha_1622 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Ppha_2576 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_1433 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D Ppha_1434 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D Ppha_0989 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Ppha_1432 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Ppha_1425 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Ppha_2561 recA protein K03553 recA; recombination protein RecA
D Ppha_0425 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Ppha_0693 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Ppha_0658 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Ppha_1511 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Ppha_1204 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Ppha_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Ppha_2401 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1448 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_2209 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_0889 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1124 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_2241 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1455 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_1428 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Ppha_2799 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Ppha_1175 recombination protein RecR K06187 recR; recombination protein RecR
D Ppha_0701 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Ppha_1662 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Ppha_2459 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Ppha_0096 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Ppha_0016 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Ppha_2842 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Ppha_0461 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_2673 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_1426 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_1317 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Ppha_0514 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Ppha_1436 DEAD/DEAH box helicase domain protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Ppha_1064 histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D Ppha_1369 DNA-directed DNA polymerase K03502 umuC; DNA polymerase V
D Ppha_1368 peptidase S24 and S26 domain protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D Ppha_0973 hypothetical protein K14623 dinD; DNA-damage-inducible protein D
D Ppha_0916 DNA-damage-inducible protein D K14623 dinD; DNA-damage-inducible protein D
D Ppha_1447 prophage antirepressor K14623 dinD; DNA-damage-inducible protein D
D Ppha_2350 regulatory protein RecX K03565 recX; regulatory protein
D Ppha_0189 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Ppha_0876 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Ppha_1506 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:pph03029]
D Ppha_0398 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Ppha_0175 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Ppha_2352 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Ppha_0287 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Ppha_0286 translation elongation factor G K02355 fusA; elongation factor G
D Ppha_2690 small GTP-binding protein K02355 fusA; elongation factor G
D Ppha_0456 GTP-binding protein Era K03595 era; GTPase
D Ppha_0861 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Ppha_0665 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Ppha_1620 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Ppha_0030 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Ppha_2879 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Ppha_0434 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Ppha_0250 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Ppha_2416 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Ppha_2787 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D Ppha_2576 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0108 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Ppha_0432 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Ppha_2156 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Ppha_1087 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Ppha_0834 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Ppha_0833 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Ppha_0867 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Ppha_1088 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Ppha_0365 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Ppha_2357 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Ppha_2921 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Ppha_1573 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pph02000]
D Ppha_0382 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Ppha_1057 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Ppha_0422 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Ppha_0523 ABC transporter related K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D Ppha_0635 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Ppha_0379 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Ppha_0378 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Ppha_0821 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Ppha_0822 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D Ppha_0770 ABC transporter related K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D Ppha_1823 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Ppha_0241 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Ppha_1998 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Ppha_0475 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Ppha_1999 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein
D Ppha_0474 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Ppha_0473 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Ppha_1995 ABC transporter related K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Ppha_1352 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Ppha_1530 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Ppha_0630 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D Ppha_1529 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein
D Ppha_2632 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D Ppha_2631 ABC transporter related K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Ppha_2254 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Ppha_2252 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Ppha_2253 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Ppha_1776 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1908 OmpA/MotB domain protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1682 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Ppha_1681 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Ppha_1680 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Ppha_1679 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Ppha_2022 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_0480 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_1830 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Ppha_0479 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_1829 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_2016 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D Ppha_0478 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_1828 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Ppha_2015 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Ppha_1827 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_2024 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Ppha_0477 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Ppha_1826 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Ppha_0982 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Ppha_0691 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Ppha_0692 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Ppha_1644 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Ppha_2146 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Ppha_0669 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Ppha_1991 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Ppha_1994 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Ppha_1993 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Ppha_1216 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Ppha_1268 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Ppha_1269 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Ppha_0205 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Ppha_0207 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Ppha_0206 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Ppha_0491 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Ppha_0492 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Ppha_0490 ABC transporter related K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Ppha_1901 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Ppha_2369 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Ppha_2546 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Ppha_0421 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_1387 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_1388 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_0718 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Ppha_1099 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Ppha_0481 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Ppha_2283 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Ppha_0907 ABC transporter related K09812 ftsE; cell division transport system ATP-binding protein
D Ppha_1327 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Ppha_1636 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Ppha_1637 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Ppha_1280 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Ppha_1328 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Ppha_1279 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Ppha_1635 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Ppha_1689 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Ppha_0990 PUCC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D Ppha_0063 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Ppha_1624 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D Ppha_0627 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D Ppha_2607 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Ppha_0254 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Ppha_0392 putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D Ppha_0086 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Ppha_0242 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Ppha_0243 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Ppha_2788 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Ppha_2441 magnesium transporter K06213 mgtE; magnesium transporter
D Ppha_0729 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Ppha_2164 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D Ppha_2163 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Ppha_1185 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Ppha_1913 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Ppha_2802 CrcB protein K06199 crcB; fluoride exporter
D Ppha_2846 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Ppha_2418 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Ppha_2330 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Ppha_0761 outer membrane autotransporter barrel domain protein K12686 apeE; outer membrane lipase/esterase
D Ppha_1262 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Ppha_2848 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Ppha_2580 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Ppha_1992 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Ppha_1997 TonB-dependent receptor, putative K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Ppha_0381 type I secretion outer membrane protein, TolC family K12538 hasF; outer membrane protein, type I secretion system
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0633 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D Ppha_0121 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1119 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1011 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Ppha_0432 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Ppha_2881 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D Ppha_2198 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Ppha_0122 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Ppha_1102 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D Ppha_0763 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D Ppha_2098 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Ppha_1103 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Ppha_1067 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Ppha_1514 Chloride channel core K03281 clcA; chloride channel protein, CIC family
D Ppha_2103 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D Ppha_1894 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein
D Ppha_1230 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D Ppha_2756 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2574 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2570 Arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2215 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_1521 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Ppha_2859 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Ppha_2303 Bile acid:sodium symporter K03325 ACR3; arsenite transporter
D Ppha_0853 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Ppha_2771 K potassium transporter K03549 kup; KUP system potassium uptake protein
D Ppha_2895 cell cycle protein K03588 ftsW; cell division protein FtsW
D Ppha_1390 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D Ppha_0732 TonB family protein K03832 tonB; periplasmic protein TonB
D Ppha_1987 TonB family protein K03832 tonB; periplasmic protein TonB
D Ppha_0225 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Ppha_2159 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Ppha_2160 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Ppha_2162 transcriptional regulator, Fis family K03646 tolA; colicin import membrane protein
D Ppha_2161 WD40 domain protein beta Propeller K03641 tolB; TolB protein
D Ppha_1160 Inorganic diphosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Ppha_0944 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Ppha_0947 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Ppha_0945 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Ppha_0946 conserved hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Ppha_0912 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D Ppha_0064 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Ppha_0380 secretion protein HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system
D Ppha_0636 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Ppha_1117 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0123 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_1676 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0487 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0769 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D Ppha_0519 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Ppha_1007 exopolysaccharide biosynthesis-related uncharacterized protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D Ppha_2844 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Ppha_2843 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Ppha_0662 TspO and MBR like protein K05770 TSPO; translocator protein
D Ppha_2698 hypothetical protein K00389 yidH; inner membrane protein YidH
C 02044 Secretion system [BR:pph02044]
D Ppha_0635 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D Ppha_0636 secretion protein HlyD family protein K11003 hlyD; membrane fusion protein, hemolysin D
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0379 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Ppha_0378 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D Ppha_0380 secretion protein HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system
D Ppha_0381 type I secretion outer membrane protein, TolC family K12538 hasF; outer membrane protein, type I secretion system
D Ppha_0633 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D Ppha_0807 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Ppha_0799 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Ppha_0800 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Ppha_0803 Flp pilus assembly protein ATPase CpaE-like protein K02282 cpaE; pilus assembly protein CpaE
D Ppha_0804 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Ppha_0805 type II secretion system protein K12510 tadB; tight adherence protein B
D Ppha_0806 type II secretion system protein K12511 tadC; tight adherence protein C
D Ppha_0798 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Ppha_2555 Helix-hairpin-helix DNA-binding class 1 K02237 comEA; competence protein ComEA
D Ppha_1891 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Ppha_1646 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Ppha_0761 outer membrane autotransporter barrel domain protein K12686 apeE; outer membrane lipase/esterase
D Ppha_1311 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Ppha_0013 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Ppha_2685 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Ppha_0014 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Ppha_2085 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Ppha_0309 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Ppha_1493 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Ppha_2611 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Ppha_0219 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Ppha_2921 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Ppha_0702 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Ppha_1535 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pph02042]
D Ppha_2846 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:pph02022]
D Ppha_1702 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Ppha_1701 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Ppha_1318 multi-sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Ppha_1427 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_1177 GAF sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_1825 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_0076 multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Ppha_0229 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_1653 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_1298 PAS/PAC sensor signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_0872 histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1350 multi-sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1154 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D Ppha_1654 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pph02035]
D Ppha_0229 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_1653 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Ppha_0807 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Ppha_0798 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D Ppha_0799 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Ppha_0800 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC
D Ppha_0803 Flp pilus assembly protein ATPase CpaE-like protein K02282 cpaE; pilus assembly protein CpaE
D Ppha_0804 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pph04812]
D Ppha_0848 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Ppha_1921 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Ppha_2890 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Ppha_2891 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Ppha_2439 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Ppha_1125 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Ppha_1699 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Ppha_2438 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pph04147]
D Ppha_1573 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Ppha_2689 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Ppha_1091 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Ppha_2906 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Ppha_1142 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Ppha_1082 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Ppha_0834 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Ppha_2156 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Ppha_1515 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Ppha_1790 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Ppha_0287 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Ppha_1810 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase
D Ppha_2845 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Ppha_1487 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2833 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Ppha_2095 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Ppha_1510 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Ppha_0460 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Ppha_1367 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Ppha_1378 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Ppha_2207 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Ppha_2627 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Ppha_1767 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Ppha_0943 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Ppha_0103 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Ppha_1700 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Ppha_1520 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Ppha_2259 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Ppha_1027 Ste24 endopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D Ppha_2012 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_1797 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Ppha_0430 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Ppha_2483 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Ppha_1779 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Ppha_0780 phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Ppha_2185 Lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:pph02048]
D Ppha_1662 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Ppha_2459 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Ppha_2458 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Ppha_1663 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Ppha_1657 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Ppha_1661 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Ppha_2448 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Ppha_1659 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Ppha_1660 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Ppha_1658 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d
D Ppha_2454 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Ppha_2453 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D Ppha_2452 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Ppha_2451 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Ppha_2450 hypothetical protein K19140 csm5; CRISPR-associated protein Csm5
D Ppha_0743 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Ppha_1217 protein of unknown function DUF450 K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Ppha_1456 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Ppha_1452 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Ppha_0745 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Ppha_1219 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Ppha_0750 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Ppha_1218 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Ppha_1454 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Ppha_2869 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0676 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Ppha_0675 DNA methylase N-4/N-6 domain protein K24451 zim; modification methylase
D Ppha_1130 type III restriction system endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Ppha_1979 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Ppha_0344 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Ppha_1128 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Ppha_1980 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Ppha_0342 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Ppha_2240 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Ppha_2536 DNA topoisomerase type IA zn finger domain protein K07448 mrr; restriction system protein
D Ppha_0265 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Ppha_2131 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Ppha_1737 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Ppha_2915 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Ppha_0264 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D Ppha_0093 hypothetical protein K07172 mazE; antitoxin MazE
D Ppha_0985 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Ppha_1272 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D Ppha_1271 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Ppha_2504 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D Ppha_2503 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D Ppha_1443 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Ppha_1792 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Ppha_2586 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Ppha_0266 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_1557 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_2046 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_2229 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_0261 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Ppha_0681 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Ppha_0836 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Ppha_1180 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Ppha_1370 death-on-curing family protein K07341 doc; death on curing protein
D Ppha_1596 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Ppha_1376 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Ppha_2030 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D Ppha_1847 putative transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Ppha_1548 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Ppha_1597 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Ppha_2447 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Ppha_2031 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Ppha_1377 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Ppha_1982 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Ppha_1480 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D Ppha_1841 conserved hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D Ppha_1840 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D Ppha_2777 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Ppha_0151 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Ppha_0420 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D Ppha_1096 virulence associated protein B K18829 mvpT; antitoxin VapB
D Ppha_0152 SpoVT/AbrB-like protein K18829 mvpT; antitoxin VapB
D Ppha_2778 SpoVT/AbrB domain protein K18829 mvpT; antitoxin VapB
D Ppha_1048 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D Ppha_0826 conserved hypothetical protein K21495 fitA; antitoxin FitA
D Ppha_2890 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Ppha_0848 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Ppha_1921 cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Ppha_0464 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Ppha_0365 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pph04090]
C 01504 Antimicrobial resistance genes [BR:pph01504]
D Ppha_2018 peptidase M15D VanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Ppha_1117 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0123 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_1676 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0487 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Ppha_0122 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D Ppha_0121 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1119 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Ppha_1633 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0066 outer membrane efflux protein K12340 tolC; outer membrane protein
D Ppha_0768 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pph00537]
D Ppha_1700 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pph03100]
D Ppha_R0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Ppha_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Ppha_R0013 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Ppha_R0050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Ppha_R0032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Ppha_R0019 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Ppha_R0048 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Ppha_R0044 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Ppha_R0021 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Ppha_R0014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Ppha_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Ppha_R0041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Ppha_R0045 tRNA-His K14226 tRNA-His; tRNA His
D Ppha_R0004 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Ppha_R0009 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Ppha_R0024 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Ppha_R0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Ppha_R0043 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Ppha_R0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Ppha_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Ppha_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met
D Ppha_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met
D Ppha_R0017 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Ppha_R0030 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Ppha_R0047 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Ppha_R0052 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Ppha_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0037 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Ppha_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Ppha_R0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Ppha_R0056 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Ppha_R0053 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Ppha_R0055 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Ppha_R0018 tRNA-Val K14237 tRNA-Val; tRNA Val
D Ppha_R0002 tRNA-Val K14237 tRNA-Val; tRNA Val
D Ppha_R0028 tRNA-Val K14237 tRNA-Val; tRNA Val
D Ppha_R0003 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0008 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0023 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Ppha_R0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Ppha_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Ppha_R0059 RNA component of RNaseP K01978 rnpB; M1 RNA
D Ppha_R0060 tmRNA as predicted by Rfam (RF00023), score 113.46 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Ppha_0075 Indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Ppha_0074 pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Ppha_2442 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Ppha_0005 beta-lactamase domain protein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D Ppha_1141 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Ppha_1104 methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Ppha_1754 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Ppha_1755 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Ppha_2143 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Ppha_0364 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Ppha_1888 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Ppha_0494 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Ppha_1120 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Ppha_1024 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Ppha_2863 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Ppha_1473 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Ppha_2621 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Ppha_2609 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Ppha_1199 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Ppha_2265 N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D Ppha_1060 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Ppha_2216 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Ppha_1550 Kojibiose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D Ppha_0847 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Ppha_0476 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Ppha_2876 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D Ppha_2305 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Ppha_1391 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Ppha_0369 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D Ppha_2112 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Ppha_1076 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Ppha_0963 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Ppha_1245 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Ppha_0416 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Ppha_0690 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Ppha_2855 Esterase/lipase-like protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Ppha_0104 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Ppha_2251 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Ppha_0099 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Ppha_2814 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Ppha_2857 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Ppha_2068 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Ppha_0875 Lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D Ppha_1788 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Ppha_1774 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Ppha_0222 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Ppha_2370 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Ppha_1309 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Ppha_2070 peptidyl-prolyl cis-trans isomerase cyclophilin type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Ppha_2538 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D Ppha_1092 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Ppha_2081 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Ppha_1543 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D Ppha_2387 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D Ppha_0366 nitrogen-fixing NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Ppha_1815 gas vesicle protein GvpN K04748 norQ; nitric oxide reductase NorQ protein
D Ppha_1956 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Ppha_1955 Nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Ppha_1954 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Ppha_0037 4Fe-4S ferredoxin iron-sulfur binding domain protein K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D Ppha_0036 methyl-viologen-reducing hydrogenase delta subunit K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D Ppha_0035 heterodisulfide reductase, putative K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC
D Ppha_0062 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH
D Ppha_0429 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Ppha_2322 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein
D Ppha_0051 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Ppha_2071 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Ppha_2204 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D Ppha_1895 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D Ppha_1889 DoxX family protein K15977 K15977; putative oxidoreductase
D Ppha_2462 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Ppha_0374 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Ppha_0934 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Ppha_2537 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Ppha_1950 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D Ppha_1951 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
C 99974 Translation
D Ppha_0925 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Ppha_0045 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Ppha_2564 trigger factor domain K03545 tig; trigger factor
D Ppha_0862 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Ppha_2050 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Ppha_2049 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Ppha_2048 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Ppha_2051 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Ppha_0672 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Ppha_1855 OsmC family protein K07397 yhfA; putative redox protein
D Ppha_1341 OsmC family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D Ppha_2132 conserved hypothetical protein K07445 K07445; putative DNA methylase
D Ppha_0354 HNH nuclease K07454 K07454; putative restriction endonuclease
D Ppha_0935 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Ppha_1481 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Ppha_0017 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Ppha_0412 DNA protecting protein DprA K04096 smf; DNA processing protein
D Ppha_1885 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Ppha_1413 hypothetical protein K07481 K07481; transposase, IS5 family
D Ppha_2347 hypothetical protein K07481 K07481; transposase, IS5 family
D Ppha_1665 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D Ppha_1922 hypothetical protein K07481 K07481; transposase, IS5 family
D Ppha_2297 hypothetical protein K07481 K07481; transposase, IS5 family
D Ppha_2646 hypothetical protein K07481 K07481; transposase, IS5 family
D Ppha_0120 hypothetical protein K07481 K07481; transposase, IS5 family
D Ppha_1881 transposase IS3/IS911 family protein K07483 K07483; transposase
D Ppha_2729 transposase IS3/IS911 family protein K07483 K07483; transposase
D Ppha_0185 transposase IS3/IS911 family protein K07483 K07483; transposase
D Ppha_0136 transposase IS3/IS911 family protein K07483 K07483; transposase
D Ppha_0966 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Ppha_1244 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Ppha_1291 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Ppha_1416 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Ppha_2405 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Ppha_2426 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Ppha_0508 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Ppha_0614 transposase family protein K07494 K07494; putative transposase
D Ppha_1074 transposase family protein K07494 K07494; putative transposase
D Ppha_2544 transposase family protein K07494 K07494; putative transposase
D Ppha_0135 Integrase catalytic region K07497 K07497; putative transposase
D Ppha_0184 Integrase catalytic region K07497 K07497; putative transposase
D Ppha_1880 Integrase catalytic region K07497 K07497; putative transposase
D Ppha_2730 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Ppha_1174 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Ppha_1609 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Ppha_1675 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Ppha_1118 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Ppha_1526 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Ppha_1578 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D Ppha_0855 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Ppha_0953 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Ppha_1152 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Ppha_0410 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Ppha_1634 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Ppha_1281 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Ppha_1818 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
D Ppha_1821 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
D Ppha_1819 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
D Ppha_1820 gas vesicle protein GVPa K23262 gvpA; gas vesicle structural protein
C 99994 Others
D Ppha_1678 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Ppha_2864 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Ppha_0711 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Ppha_2488 Patatin K07001 K07001; NTE family protein
D Ppha_2385 Patatin K07001 K07001; NTE family protein
D Ppha_1623 ribonuclease BN K07058 K07058; membrane protein
D Ppha_2641 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Ppha_0859 SNARE associated Golgi protein K03975 dedA; membrane-associated protein
D Ppha_1203 membrane protein of unknown function K08972 K08972; putative membrane protein
D Ppha_2362 protein of unknown function DUF477 K08988 K08988; putative membrane protein
D Ppha_1258 protein of unknown function DUF477 K08988 K08988; putative membrane protein
D Ppha_0919 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D Ppha_2363 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Ppha_1259 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Ppha_1140 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Ppha_2557 ATPase K06921 K06921; uncharacterized protein
D Ppha_0741 putative phage resistance protein K06926 K06926; uncharacterized protein
D Ppha_1630 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Ppha_1343 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Ppha_0032 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Ppha_2903 conserved hypothetical protein K06962 K06962; uncharacterized protein
D Ppha_1608 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D Ppha_1571 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Ppha_0055 hypothetical protein K07034 K07034; uncharacterized protein
D Ppha_0060 yecA family protein K07039 K07039; uncharacterized protein
D Ppha_2102 yecA family protein K07039 K07039; uncharacterized protein
D Ppha_0113 yecA family protein K07039 K07039; uncharacterized protein
D Ppha_1746 protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D Ppha_2650 conserved hypothetical protein K07065 K07065; uncharacterized protein
D Ppha_0094 conserved hypothetical protein K07065 K07065; uncharacterized protein
D Ppha_0084 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D Ppha_0157 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D Ppha_1474 permease K07089 K07089; uncharacterized protein
D Ppha_0462 conserved hypothetical protein K07090 K07090; uncharacterized protein
D Ppha_2328 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Ppha_0031 DsrE family protein K07092 K07092; uncharacterized protein
D Ppha_2388 transcriptional regulator, XRE family K07108 K07108; uncharacterized protein
D Ppha_1274 nuclear protein SET K07117 K07117; uncharacterized protein
D Ppha_2686 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Ppha_1970 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Ppha_0997 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Ppha_0127 ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D Ppha_0904 ATPase K07133 K07133; uncharacterized protein
D Ppha_0143 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Ppha_2828 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein
D Ppha_1959 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Ppha_0133 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein
D Ppha_0263 conserved hypothetical protein K07133 K07133; uncharacterized protein
D Ppha_1650 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Ppha_2922 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Ppha_0431 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Ppha_0932 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D Ppha_2415 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Ppha_2801 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Ppha_0738 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D Ppha_2083 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Ppha_0914 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Ppha_1715 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Ppha_2409 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Ppha_2272 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D Ppha_2521 conserved hypothetical protein K09803 K09803; uncharacterized protein
D Ppha_2473 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Ppha_1770 conserved hypothetical protein K09931 K09931; uncharacterized protein
D Ppha_1373 conserved hypothetical protein K09978 K09978; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024