+D GENES KO
#
KEGG Orthology (KO) - Candidatus Pelagisphaera phototrophica
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ppht00010]
D GA004_08565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GA004_02100 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GA004_01565 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D GA004_09425 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D GA004_17450 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GA004_04145 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GA004_04135 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GA004_04140 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GA004_15220 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GA004_08890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GA004_05855 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GA004_12450 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GA004_17015 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GA004_17020 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GA004_17025 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_03015 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GA004_03020 pyruvate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GA004_10340 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GA004_11125 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GA004_03350 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GA004_14855 HAD-IA family hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:ppht00020]
D GA004_16570 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GA004_14665 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GA004_17350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GA004_10570 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GA004_10575 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_03015 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GA004_03020 pyruvate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GA004_02625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GA004_02620 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GA004_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GA004_01215 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GA004_01225 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GA004_06065 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GA004_11595 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D GA004_17015 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GA004_17020 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GA004_17025 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ppht00030]
D GA004_08565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GA004_15030 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GA004_08755 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GA004_09410 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GA004_09665 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GA004_02140 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GA004_14555 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GA004_15985 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GA004_01895 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GA004_17950 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GA004_12635 orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D GA004_10895 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GA004_15680 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D GA004_13390 ribose-phosphate pyrophosphokinase-like domain-containing protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GA004_04235 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GA004_10905 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D GA004_08820 pyrroloquinoline quinone-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D GA004_07740 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_11615 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_12270 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_13125 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_00890 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_04540 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_10255 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D GA004_04230 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D GA004_09425 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D GA004_17450 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GA004_02100 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GA004_01565 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:ppht00040]
D GA004_05345 SDR family oxidoreductase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D GA004_12545 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D GA004_16150 altronate dehydratase family protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D GA004_13270 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GA004_11740 araD; L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GA004_14555 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GA004_11750 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D GA004_05910 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D GA004_04255 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GA004_11640 sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D GA004_11630 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D GA004_11685 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D GA004_00775 YjhG/YagF family D-xylonate dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82]
D GA004_12580 fumarylacetoacetate hydrolase family protein K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D GA004_06545 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:ppht00051]
D GA004_07180 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GA004_17920 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GA004_08295 NTP transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D GA004_02070 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GA004_02080 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GA004_02075 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D GA004_03645 SDR family oxidoreductase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D GA004_11300 amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D GA004_03195 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D GA004_11325 mandelate racemase/muconate lactonizing enzyme family protein K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D GA004_12465 SDR family oxidoreductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D GA004_11640 sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D GA004_11630 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D GA004_05175 mpgS; mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D GA004_05170 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D GA004_02100 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GA004_01565 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D GA004_15735 carbohydrate kinase family protein K27475 khk; ketohexokinase [EC:2.7.1.3]
D GA004_11685 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D GA004_04255 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GA004_09425 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D GA004_17450 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GA004_04145 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GA004_17950 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GA004_11580 HAD-IA family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:ppht00052]
D GA004_10340 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GA004_11125 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GA004_03350 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GA004_02895 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GA004_12375 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_04650 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_05420 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GA004_00035 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GA004_04205 hypothetical protein K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D GA004_02100 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GA004_04515 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D GA004_04585 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D GA004_07210 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:ppht00053]
D GA004_13270 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GA004_00210 inositol oxygenase K00469 MIOX; inositol oxygenase [EC:1.13.99.1]
D GA004_07740 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_11615 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_12270 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_13125 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_00890 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_04540 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_01585 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GA004_11740 araD; L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_07650 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D GA004_07645 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D GA004_07150 mandelate racemase/muconate lactonizing enzyme family protein K01683 araD; D-arabinonate dehydratase [EC:4.2.1.5]
D GA004_12580 fumarylacetoacetate hydrolase family protein K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D GA004_06545 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D GA004_05265 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D GA004_05350 mandelate racemase/muconate lactonizing enzyme family protein K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C 00500 Starch and sucrose metabolism [PATH:ppht00500]
D GA004_07210 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GA004_15760 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D GA004_12105 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D GA004_15320 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D GA004_14730 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D GA004_08865 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D GA004_15430 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GA004_08565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GA004_07180 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppht00520]
D GA004_17705 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D GA004_07180 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GA004_00955 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GA004_14520 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GA004_10215 UDP-N-acetylglucosamine diphosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GA004_01130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GA004_16510 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GA004_13270 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GA004_02895 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GA004_12375 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_04650 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_05420 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_00035 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GA004_01585 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GA004_08565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GA004_17920 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GA004_08295 NTP transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D GA004_02070 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GA004_02080 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GA004_02075 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D GA004_12105 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ppht00620]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GA004_03015 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GA004_03020 pyruvate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GA004_17015 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GA004_17020 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GA004_17025 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_06825 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GA004_05855 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GA004_08970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GA004_17870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GA004_17875 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GA004_08315 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GA004_09465 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_11625 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D GA004_09240 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GA004_12475 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GA004_14870 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GA004_17200 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GA004_11595 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GA004_06065 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GA004_05535 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D GA004_12450 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GA004_11460 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GA004_17245 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppht00630]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GA004_16570 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GA004_14665 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GA004_04480 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D GA004_06835 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D GA004_04475 FAD-binding protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D GA004_04470 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D GA004_10910 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GA004_15750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D GA004_01940 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D GA004_08950 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GA004_17615 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GA004_06880 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D GA004_12505 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_12500 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D GA004_00900 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GA004_04235 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GA004_01820 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:ppht00640]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GA004_06825 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GA004_17965 transketolase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_08970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GA004_17870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GA004_17875 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GA004_08315 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GA004_02620 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GA004_02625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GA004_14665 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:ppht00650]
D GA004_17315 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D GA004_13645 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D GA004_13640 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D GA004_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GA004_01215 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GA004_01225 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GA004_03015 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GA004_03020 pyruvate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GA004_08965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GA004_16925 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GA004_05340 alcohol dehydrogenase catalytic domain-containing protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:ppht00660]
D GA004_08965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GA004_16925 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GA004_02620 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GA004_02625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GA004_04620 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D GA004_15300 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GA004_15295 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GA004_14875 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ppht00562]
D GA004_13215 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GA004_14320 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GA004_17225 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D GA004_00210 inositol oxygenase K00469 MIOX; inositol oxygenase [EC:1.13.99.1]
D GA004_15905 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D GA004_04145 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ppht00190]
D GA004_10445 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D GA004_02250 nuoB; NADH-quinone oxidoreductase subunit NuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D GA004_02255 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D GA004_02260 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D GA004_02265 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D GA004_02270 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D GA004_02280 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D GA004_02285 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D GA004_02290 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D GA004_02295 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GA004_02300 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D GA004_02305 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GA004_02310 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D GA004_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GA004_01215 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GA004_01225 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GA004_13200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GA004_06510 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D GA004_06520 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D GA004_06505 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D GA004_06500 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D GA004_13195 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D GA004_06370 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D GA004_02005 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GA004_02015 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GA004_02010 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GA004_02020 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GA004_01985 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GA004_01995 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GA004_01990 ATPase K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GA004_10390 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D GA004_14570 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ppht00710]
D GA004_04140 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GA004_04135 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GA004_09425 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D GA004_17450 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GA004_15985 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GA004_17950 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GA004_04145 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GA004_14555 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GA004_01895 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GA004_12450 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ppht00720]
D GA004_12450 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D GA004_11595 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GA004_06065 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GA004_01220 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GA004_01215 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GA004_01225 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GA004_02625 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D GA004_02620 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D GA004_03015 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D GA004_03020 pyruvate ferredoxin oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D GA004_17350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GA004_14665 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GA004_08970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GA004_17870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GA004_17875 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GA004_08315 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GA004_06395 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GA004_10555 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GA004_06825 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ppht00680]
D GA004_17615 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GA004_15750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D GA004_10910 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GA004_08890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GA004_09425 hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D GA004_17450 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GA004_02100 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D GA004_12635 orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D GA004_06825 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GA004_15220 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GA004_17270 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GA004_06840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GA004_12150 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:ppht00910]
D GA004_08950 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GA004_01940 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
C 00920 Sulfur metabolism [PATH:ppht00920]
D GA004_12115 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GA004_12120 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GA004_09485 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D GA004_06740 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D GA004_16095 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D GA004_06080 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D GA004_01480 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D GA004_04195 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D GA004_04190 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D GA004_08835 rhodanese-like domain-containing protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D GA004_03610 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GA004_15310 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GA004_00840 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GA004_00390 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ppht00061]
D GA004_08970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GA004_17870 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GA004_17875 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GA004_08315 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GA004_17065 acyl-CoA synthetase K18660 ACSF3; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D GA004_10175 hypothetical protein K02078 acpP; acyl carrier protein
D GA004_12365 acyl carrier protein K02078 acpP; acyl carrier protein
D GA004_06415 acyl carrier protein K02078 acpP; acyl carrier protein
D GA004_14700 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GA004_14540 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GA004_00060 beta-ketoacyl-ACP synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GA004_14380 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GA004_10170 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_12370 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_06420 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_10165 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_06410 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_15455 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GA004_01395 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GA004_11760 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D GA004_15450 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GA004_17315 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D GA004_00605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ppht00071]
D GA004_00605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ppht00561]
D GA004_00900 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_04415 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GA004_04410 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D GA004_14275 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GA004_14535 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GA004_17265 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 00564 Glycerophospholipid metabolism [PATH:ppht00564]
D GA004_01205 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GA004_14945 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D GA004_17265 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GA004_08685 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GA004_15110 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GA004_01910 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GA004_15865 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GA004_14305 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GA004_14300 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D GA004_17240 PLDc N-terminal domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ppht00600]
D GA004_10025 sulfatase-like hydrolase/transferase K01130 E3.1.6.1; arylsulfatase [EC:3.1.6.1]
D GA004_10660 glycoside hydrolase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D GA004_05025 glycoside hydrolase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ppht01040]
D GA004_10190 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GA004_17660 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GA004_09735 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ppht00230]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GA004_13390 ribose-phosphate pyrophosphokinase-like domain-containing protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GA004_04085 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GA004_14235 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GA004_00120 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GA004_05085 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D GA004_04460 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D GA004_04090 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GA004_14280 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D GA004_14285 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GA004_04380 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GA004_02180 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GA004_08170 hypothetical protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GA004_09780 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GA004_06845 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GA004_13660 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GA004_14560 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GA004_14355 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GA004_06425 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GA004_14860 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GA004_13710 FAD binding domain-containing protein K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D GA004_13715 molybdopterin-dependent oxidoreductase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D GA004_16600 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GA004_13700 amidohydrolase family protein K01487 guaD; guanine deaminase [EC:3.5.4.3]
D GA004_01150 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GA004_05755 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GA004_05760 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GA004_17610 dgt; dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D GA004_08545 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GA004_14360 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GA004_13820 amidohydrolase family protein K01486 ade; adenine deaminase [EC:3.5.4.2]
D GA004_13685 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D GA004_13780 adenosine deaminase family protein K21053 ade; adenine deaminase [EC:3.5.4.2]
D GA004_05570 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D GA004_09485 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D GA004_12115 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GA004_12120 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GA004_13750 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D GA004_13745 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D GA004_13760 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D GA004_13755 M20 family metallo-hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D GA004_13725 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00240 Pyrimidine metabolism [PATH:ppht00240]
D GA004_01815 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GA004_07970 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GA004_15090 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GA004_11420 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GA004_15095 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GA004_10930 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D GA004_08930 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GA004_17790 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GA004_17545 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GA004_06425 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GA004_12425 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GA004_00065 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GA004_10980 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GA004_08625 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D GA004_03060 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D GA004_06845 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GA004_15085 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GA004_11770 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D GA004_10730 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D GA004_02215 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D GA004_05755 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GA004_05760 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GA004_15740 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GA004_03455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GA004_17105 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppht00250]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_05880 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GA004_02695 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GA004_02700 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GA004_15750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D GA004_01835 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GA004_08855 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GA004_14360 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GA004_02180 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GA004_15090 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GA004_08950 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GA004_01815 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GA004_07970 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GA004_00955 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GA004_04085 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ppht00260]
D GA004_17255 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GA004_16955 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GA004_17260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GA004_12150 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D GA004_17250 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GA004_17615 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GA004_15750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D GA004_10910 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GA004_00900 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GA004_15220 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D GA004_17270 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GA004_06840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GA004_06880 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D GA004_12505 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_12500 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D GA004_01910 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GA004_00860 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GA004_15930 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GA004_14655 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ppht00270]
D GA004_03610 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GA004_15310 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GA004_03535 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GA004_00660 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GA004_04175 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GA004_13690 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D GA004_07820 MTAP family purine nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D GA004_09960 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D GA004_00855 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GA004_04180 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GA004_17255 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GA004_16955 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GA004_17260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GA004_00840 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GA004_00390 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GA004_15260 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GA004_12945 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_06895 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_02870 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GA004_17270 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GA004_06840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ppht00280]
D GA004_12945 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_06895 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_17965 transketolase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_03295 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_17065 acyl-CoA synthetase K18660 ACSF3; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppht00290]
D GA004_00860 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GA004_15300 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GA004_15295 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GA004_14875 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GA004_08965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GA004_16925 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GA004_13410 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GA004_08570 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GA004_11715 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GA004_12945 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_06895 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_11460 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D GA004_17245 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ppht00300]
D GA004_17260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GA004_17255 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GA004_16955 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GA004_08140 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GA004_14080 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GA004_08135 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GA004_01845 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GA004_10925 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GA004_05890 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GA004_13225 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GA004_12125 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D GA004_06615 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GA004_06620 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ppht00310]
D GA004_10575 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_07975 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ppht00220]
D GA004_01840 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GA004_01835 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GA004_08855 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GA004_08950 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GA004_01815 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GA004_07970 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_14455 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D GA004_01855 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D GA004_01850 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GA004_01860 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GA004_01845 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GA004_11515 M20 family metallopeptidase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ppht00330]
D GA004_10745 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D GA004_10730 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D GA004_08900 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D GA004_06945 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D GA004_06950 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_08075 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09165 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09180 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09185 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02670 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02675 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02680 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02685 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02690 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02705 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_06385 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GA004_17555 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GA004_00090 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ppht00340]
D GA004_10455 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GA004_06575 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D GA004_10350 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D GA004_16575 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GA004_09245 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D GA004_16580 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D GA004_16585 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00180 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00550 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D GA004_16590 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ppht00350]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_16585 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00180 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_05030 aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
C 00360 Phenylalanine metabolism [PATH:ppht00360]
D GA004_00250 AMP-binding protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_16585 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00180 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_11145 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D GA004_08075 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09165 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09180 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09185 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02670 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02675 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02680 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02685 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02690 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02705 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:ppht00380]
D GA004_17580 amidohydrolase family protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D GA004_10575 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_08075 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09165 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09180 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09185 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02670 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02675 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02680 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02685 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02690 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02705 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_11145 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppht00400]
D GA004_02875 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GA004_13220 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GA004_07885 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GA004_09920 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GA004_14795 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D GA004_14405 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GA004_10975 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D GA004_03615 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GA004_11500 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GA004_16520 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GA004_14525 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D GA004_16905 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D GA004_17370 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D GA004_15930 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GA004_14655 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GA004_08580 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_16585 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00180 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ppht00410]
D GA004_01110 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_01120 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
D GA004_06825 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
C 00440 Phosphonate and phosphinate metabolism [PATH:ppht00440]
D GA004_15585 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D GA004_15675 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D GA004_15595 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D GA004_15590 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D GA004_15570 ATP-binding cassette domain-containing protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D GA004_15545 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D GA004_15690 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D GA004_15580 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D GA004_12195 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ppht00450]
D GA004_00390 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GA004_03535 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GA004_00660 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GA004_00530 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D GA004_07950 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GA004_12115 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GA004_12120 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GA004_08530 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ppht00460]
D GA004_02695 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GA004_02700 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GA004_17615 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ppht00470]
D GA004_12605 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GA004_06655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GA004_06630 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GA004_10925 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GA004_13225 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GA004_06545 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00480 Glutathione metabolism [PATH:ppht00480]
D GA004_02990 hydantoinase B/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D GA004_17350 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GA004_02140 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GA004_15030 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GA004_15210 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ppht00511]
D GA004_10660 glycoside hydrolase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D GA004_05025 glycoside hydrolase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D GA004_08615 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis [PATH:ppht00540]
D GA004_11755 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GA004_03700 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GA004_11175 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GA004_11760 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D GA004_15340 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GA004_05950 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GA004_09560 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GA004_13255 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GA004_00415 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GA004_14505 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GA004_17970 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GA004_07965 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GA004_05575 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GA004_10180 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppht00541]
D GA004_12375 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_04650 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_05420 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GA004_00035 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D GA004_13270 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D GA004_01585 GDP-mannose 4,6-dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D GA004_01780 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GA004_01785 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GA004_01515 SDR family oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GA004_17920 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GA004_08295 NTP transferase domain-containing protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D GA004_02070 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GA004_02080 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D GA004_02075 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D GA004_10215 UDP-N-acetylglucosamine diphosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:ppht00550]
D GA004_01130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GA004_06630 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GA004_06615 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GA004_06655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GA004_06620 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GA004_15105 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GA004_00110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GA004_06625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GA004_06645 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GA004_07840 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GA004_06610 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ppht00552]
D GA004_00110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ppht00543]
D GA004_12780 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D GA004_02850 hypothetical protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D GA004_03610 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ppht00730]
D GA004_15515 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GA004_09640 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GA004_09225 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
C 00740 Riboflavin metabolism [PATH:ppht00740]
D GA004_03585 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GA004_14865 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GA004_03590 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GA004_06230 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GA004_16085 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:ppht00750]
D GA004_06195 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D GA004_06840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GA004_07895 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D GA004_16555 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D GA004_17250 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ppht00760]
D GA004_05880 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GA004_05875 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D GA004_05800 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D GA004_13660 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D GA004_06845 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GA004_03155 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GA004_12430 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D GA004_16075 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GA004_00975 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D GA004_02365 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GA004_02370 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GA004_02375 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:ppht00770]
D GA004_08965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GA004_16925 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GA004_13410 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GA004_08570 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GA004_11715 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GA004_01125 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GA004_14365 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D GA004_02985 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D GA004_01120 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GA004_01115 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D GA004_03085 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GA004_14310 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GA004_06435 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GA004_16550 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GA004_12945 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_06895 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_01110 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ppht00780]
D GA004_01045 class I SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D GA004_14380 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GA004_10170 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_12370 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_06420 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_10165 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_06410 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_15455 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GA004_01395 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GA004_15450 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GA004_01055 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GA004_06795 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GA004_01070 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GA004_01060 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D GA004_01065 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D GA004_05795 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ppht00785]
D GA004_01520 hypothetical protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D GA004_09535 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_17015 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D GA004_17020 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D GA004_17025 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GA004_10570 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GA004_10575 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GA004_17965 transketolase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D GA004_06880 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D GA004_12505 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GA004_12500 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ppht00790]
D GA004_05870 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D GA004_07115 metallophosphoesterase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_07685 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_13850 alkaline phosphatase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_05360 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_00620 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D GA004_00615 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GA004_00625 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GA004_03450 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GA004_08320 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GA004_03585 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GA004_00640 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D GA004_00635 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D GA004_07795 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GA004_07785 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GA004_09620 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GA004_15855 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GA004_11960 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D GA004_01925 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GA004_02155 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GA004_02145 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GA004_17405 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GA004_02160 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GA004_02135 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D GA004_05985 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ppht00670]
D GA004_03450 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GA004_06395 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GA004_17615 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GA004_00120 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GA004_08170 hypothetical protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GA004_09780 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GA004_16875 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GA004_12505 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GA004_00660 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D GA004_03455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GA004_01820 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D GA004_10555 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ppht00860]
D GA004_05545 tRNA glutamyl-Q synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_06030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_08150 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GA004_12435 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GA004_10940 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GA004_16920 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GA004_10480 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GA004_10475 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D GA004_12700 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D GA004_14215 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GA004_16915 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D GA004_13200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GA004_13195 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D GA004_11465 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppht00130]
D GA004_17295 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GA004_08535 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D GA004_08540 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D GA004_14350 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D GA004_14345 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D GA004_13230 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D GA004_14765 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ppht00900]
D GA004_09640 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GA004_15115 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GA004_17795 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D GA004_17785 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D GA004_17805 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D GA004_15125 ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GA004_00200 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GA004_11045 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D GA004_06805 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GA004_12730 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GA004_00420 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GA004_15105 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GA004_09650 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ppht00906]
D GA004_12735 crtI; phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D GA004_12740 lycopene cyclase domain-containing protein K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins [PATH:ppht01051]
D GA004_14370 HAD family hydrolase K16017 rifM; AHBA synthesis associated protein
D GA004_15985 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics [PATH:ppht01059]
D GA004_12295 epoxide hydrolase 1 K21159 sgcF; epoxide hydrolase
D GA004_13845 cytochrome P450 K21164 sgcE7; enediyne biosynthesis protein E7
D GA004_17050 50S ribosomal protein L11 methyltransferase K21170 calE3; enediyne biosynthesis protein CalE3
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ppht00523]
D GA004_01780 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GA004_01785 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GA004_01515 SDR family oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GA004_16475 GDP-mannose 4,6-dehydratase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D GA004_08535 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D GA004_01785 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ppht00332]
D GA004_17555 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GA004_00090 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ppht00261]
D GA004_12115 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GA004_12120 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GA004_17255 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GA004_16955 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GA004_08140 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GA004_14080 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GA004_08135 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ppht00521]
D GA004_10385 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GA004_13215 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GA004_14320 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GA004_15905 Gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D GA004_01780 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GA004_01785 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GA004_01515 SDR family oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:ppht00525]
D GA004_01780 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GA004_01785 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ppht00401]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_16585 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00180 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GA004_11500 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GA004_16520 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GA004_14700 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GA004_10165 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_06410 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_15450 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GA004_10175 hypothetical protein K02078 acpP; acyl carrier protein
D GA004_12365 acyl carrier protein K02078 acpP; acyl carrier protein
D GA004_06415 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D GA004_04175 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ppht00362]
D GA004_04020 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D GA004_04015 pcaC; 4-carboxymuconolactone decarboxylase K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
D GA004_17090 hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D GA004_04035 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D GA004_04040 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D GA004_04025 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D GA004_04615 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D GA004_04625 PIG-L family deacetylase K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D GA004_04620 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D GA004_04045 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
C 00627 Aminobenzoate degradation [PATH:ppht00627]
D GA004_08075 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09165 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09180 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09185 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02670 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02675 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02680 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02685 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02690 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02705 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09465 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:ppht00364]
D GA004_08230 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ppht00625]
D GA004_10020 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GA004_11995 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ppht00361]
D GA004_08230 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D GA004_17090 hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D GA004_11995 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:ppht00623]
D GA004_08230 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:ppht00643]
D GA004_08075 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09165 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09180 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_09185 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02670 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02675 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02680 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02685 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02690 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_02705 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D GA004_13645 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D GA004_13640 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D GA004_07740 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_11615 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_12270 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_13125 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_00890 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_04540 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
C 00363 Bisphenol degradation
D GA004_11135 2,4'-dihydroxyacetophenone dioxygenase family protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
D GA004_04035 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D GA004_04040 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ppht03020]
D GA004_16765 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GA004_16760 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GA004_16610 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GA004_12160 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D GA004_15070 DEAD/DEAH box helicase family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ppht03010]
D GA004_10450 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GA004_12080 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GA004_16695 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GA004_16615 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GA004_16640 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GA004_15370 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GA004_16740 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GA004_16655 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GA004_01865 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GA004_16730 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GA004_16620 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GA004_16745 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GA004_16625 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GA004_16660 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GA004_06855 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GA004_16000 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GA004_16680 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GA004_00160 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GA004_16705 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GA004_00480 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GA004_14825 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GA004_16780 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GA004_16710 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GA004_16725 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GA004_16720 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GA004_16665 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GA004_16650 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GA004_16770 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GA004_15360 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GA004_16775 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GA004_16785 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GA004_01870 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GA004_16675 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GA004_16635 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GA004_16690 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GA004_16605 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GA004_16645 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GA004_15990 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GA004_08495 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GA004_12345 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GA004_16700 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GA004_16715 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GA004_16670 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GA004_15380 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D GA004_12350 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GA004_06085 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GA004_16685 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GA004_14775 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GA004_14530 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GA004_10435 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GA004_00820 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GA004_08490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GA004_14780 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GA004_17845 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppht00970]
D GA004_17855 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GA004_05545 tRNA glutamyl-Q synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_06030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_08515 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_09170 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_09175 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_13855 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_08520 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GA004_08510 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GA004_06025 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GA004_14885 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GA004_14625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GA004_15870 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GA004_02095 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GA004_10950 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GA004_12140 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GA004_10945 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GA004_08530 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GA004_16875 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GA004_06075 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GA004_05955 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GA004_14635 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GA004_09540 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GA004_11775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GA004_14445 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GA004_17280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GA004_08500 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GA004_08505 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GA004_14985 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GA004_10210 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ppht03060]
D GA004_16630 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GA004_16795 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GA004_05895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GA004_08910 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GA004_08905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GA004_00830 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GA004_16500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GA004_16895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GA004_03600 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GA004_07860 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GA004_12445 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D GA004_14645 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ppht04122]
D GA004_04115 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GA004_02145 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GA004_01925 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GA004_02150 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D GA004_08290 moeB; molybdopterin-synthase adenylyltransferase MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D GA004_02155 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GA004_17405 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ppht03018]
D GA004_08890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GA004_06850 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GA004_12090 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GA004_00525 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GA004_15325 RNB domain-containing ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GA004_08595 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GA004_04000 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GA004_00750 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GA004_05140 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GA004_09255 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GA004_06440 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GA004_00565 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GA004_14335 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GA004_14325 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GA004_14570 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ppht03030]
D GA004_12965 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GA004_14835 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GA004_09300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GA004_01915 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GA004_15355 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GA004_07870 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GA004_15365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GA004_05240 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GA004_14810 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GA004_14815 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D GA004_00015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ppht03410]
D GA004_17570 DNA-binding protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D GA004_06885 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GA004_01025 single-stranded DNA-binding protein K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D GA004_14820 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GA004_04210 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D GA004_06190 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GA004_06235 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GA004_00385 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GA004_08915 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GA004_00015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ppht03420]
D GA004_09000 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GA004_13970 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GA004_17335 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GA004_09505 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GA004_17560 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GA004_00015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GA004_15070 DEAD/DEAH box helicase family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:ppht03430]
D GA004_14725 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GA004_08860 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GA004_17560 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GA004_02930 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GA004_09645 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GA004_08915 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GA004_15365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GA004_14835 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GA004_01915 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GA004_09300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GA004_12965 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GA004_00015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ppht03440]
D GA004_08915 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GA004_15365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GA004_07800 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GA004_12390 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D GA004_01950 recA; recombinase RecA K03553 recA; recombination protein RecA
D GA004_08130 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GA004_16845 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GA004_13285 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GA004_08635 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GA004_08640 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GA004_08630 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GA004_14375 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GA004_14835 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GA004_01915 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GA004_09300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GA004_12965 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GA004_06055 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ppht03250]
D GA004_02430 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ppht02010]
D GA004_06455 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GA004_06460 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D GA004_06465 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GA004_13415 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D GA004_16145 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GA004_10375 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GA004_10370 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GA004_10360 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GA004_10365 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GA004_07575 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_10615 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_02455 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_06120 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_07570 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D GA004_10625 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D GA004_02445 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D GA004_07565 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GA004_10620 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GA004_02450 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GA004_06135 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GA004_06145 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GA004_06150 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GA004_15565 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GA004_15705 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GA004_15550 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D GA004_15555 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D GA004_15560 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GA004_17810 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17820 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GA004_17825 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GA004_03555 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GA004_03560 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D GA004_03565 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein
D GA004_03570 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GA004_03405 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D GA004_03395 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D GA004_03390 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D GA004_03400 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D GA004_02025 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D GA004_02030 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GA004_03575 ABC transporter permease K09696 natB; sodium transport system permease protein
D GA004_03580 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GA004_09545 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D GA004_06325 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D GA004_09550 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GA004_00245 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GA004_06330 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GA004_10545 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D GA004_15875 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D GA004_17985 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GA004_17830 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GA004_05695 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GA004_15540 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GA004_15535 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GA004_06725 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS) [PATH:ppht02060]
D GA004_17780 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GA004_07960 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:ppht03070]
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
D GA004_06300 hypothetical protein K02453 gspD; general secretion pathway protein D
D GA004_09265 hypothetical protein K02456 gspG; general secretion pathway protein G
D GA004_03140 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G
D GA004_06265 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D GA004_06310 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GA004_08910 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GA004_16795 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GA004_05895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GA004_16630 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GA004_08905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GA004_00830 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GA004_16500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GA004_03600 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GA004_16895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GA004_07860 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GA004_12445 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ppht02020]
D GA004_15650 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GA004_01970 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GA004_01965 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GA004_15655 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GA004_07115 metallophosphoesterase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_07685 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_13850 alkaline phosphatase family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_05360 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D GA004_10460 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D GA004_06135 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GA004_05960 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GA004_15660 response regulator transcription factor K07664 baeR; two-component system, OmpR family, response regulator BaeR
D GA004_11010 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D GA004_11020 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D GA004_16210 flagellin K02406 fliC; flagellin
D GA004_05975 flagellin K02406 fliC; flagellin
D GA004_05980 flagellin K02406 fliC; flagellin
D GA004_16285 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D GA004_16280 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GA004_11490 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D GA004_11480 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D GA004_03360 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D GA004_13195 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D GA004_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GA004_17200 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D GA004_03580 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GA004_03575 ABC transporter permease K09696 natB; sodium transport system permease protein
D GA004_16215 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D GA004_15160 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D GA004_08950 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GA004_17305 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GA004_00675 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GA004_06370 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
D GA004_01770 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D GA004_00100 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D GA004_15760 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D GA004_14120 FecR domain-containing protein K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ppht02024]
D GA004_11500 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GA004_16520 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GA004_02875 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GA004_04405 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D GA004_00605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GA004_14865 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GA004_17810 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17820 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GA004_17825 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GA004_05525 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GA004_05530 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GA004_00830 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GA004_08910 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GA004_16795 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GA004_05895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GA004_16630 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GA004_08905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GA004_16500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GA004_03600 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GA004_16895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ppht02030]
D GA004_07575 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_10615 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_02455 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_06120 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_00675 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GA004_00680 hypothetical protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D GA004_16380 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GA004_16335 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GA004_16330 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GA004_16280 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GA004_16275 hypothetical protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ppht02040]
D GA004_16390 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GA004_16385 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GA004_16380 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GA004_16370 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GA004_16365 hypothetical protein K02413 fliJ; flagellar protein FliJ
D GA004_16335 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GA004_16330 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GA004_16320 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GA004_16315 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GA004_16310 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GA004_16300 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GA004_16305 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D GA004_16400 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GA004_16395 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GA004_16350 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D GA004_16345 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D GA004_16265 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D GA004_16260 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GA004_16250 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D GA004_16245 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GA004_16230 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GA004_16225 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D GA004_16210 flagellin K02406 fliC; flagellin
D GA004_05975 flagellin K02406 fliC; flagellin
D GA004_05980 flagellin K02406 fliC; flagellin
D GA004_05995 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D GA004_06010 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D GA004_16280 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GA004_16275 hypothetical protein K02557 motB; chemotaxis protein MotB
D GA004_07865 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GA004_17305 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GA004_16285 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GA004_08890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D GA004_00660 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ppht01501]
D GA004_17810 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17820 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GA004_17825 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GA004_02380 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D GA004_05220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GA004_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
D GA004_07840 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GA004_06610 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ppht01502]
D GA004_06655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GA004_12605 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GA004_06620 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GA004_06625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GA004_06645 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppht01503]
D GA004_05960 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GA004_02430 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GA004_05220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GA004_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
D GA004_11755 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GA004_03700 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ppht01000]
C 01001 Protein kinases [BR:ppht01001]
D GA004_15650 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GA004_01970 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ppht01009]
D GA004_04180 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GA004_15890 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GA004_08960 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ppht01002]
D GA004_14645 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GA004_02900 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GA004_09125 hypothetical protein K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D GA004_16600 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GA004_04085 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GA004_01940 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D GA004_00955 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GA004_03500 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D GA004_04965 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D GA004_12405 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D GA004_15140 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D GA004_17395 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GA004_02085 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GA004_05290 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D GA004_13755 M20 family metallo-hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D GA004_01420 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GA004_06185 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GA004_13250 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D GA004_15470 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D GA004_12130 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GA004_09650 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D GA004_15120 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GA004_05960 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GA004_15335 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D GA004_01880 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D GA004_07920 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GA004_12590 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GA004_17390 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GA004_04745 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D GA004_16015 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GA004_01580 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GA004_06095 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GA004_05930 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D GA004_09685 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D GA004_16010 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D GA004_01365 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D GA004_01370 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ppht01003]
D GA004_14390 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D GA004_15320 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D GA004_08055 glycosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D GA004_05175 mpgS; mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppht01005]
D GA004_11755 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GA004_03700 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GA004_09560 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GA004_11175 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GA004_11760 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D GA004_15340 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GA004_05950 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GA004_13255 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GA004_10180 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GA004_05575 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GA004_14505 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GA004_07965 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GA004_17970 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GA004_00415 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GA004_17835 glycosyltransferase family 4 protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppht01011]
D GA004_01130 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GA004_06630 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GA004_06615 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GA004_06655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GA004_12605 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GA004_06625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GA004_06645 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GA004_00110 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GA004_06830 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GA004_07840 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GA004_06610 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01004 Lipid biosynthesis proteins [BR:ppht01004]
D GA004_14700 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GA004_14540 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GA004_00060 beta-ketoacyl-ACP synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GA004_14380 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D GA004_10170 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_12370 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_06420 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GA004_10165 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_06410 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GA004_15455 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GA004_01395 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GA004_11760 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D GA004_15450 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GA004_17315 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D GA004_09735 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D GA004_10190 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GA004_17660 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D GA004_09260 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D GA004_00605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GA004_14535 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GA004_17265 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins [BR:ppht01008]
D GA004_12295 epoxide hydrolase 1 K21159 sgcF; epoxide hydrolase
D GA004_13845 cytochrome P450 K21164 sgcE7; enediyne biosynthesis protein E7
D GA004_17050 50S ribosomal protein L11 methyltransferase K21170 calE3; enediyne biosynthesis protein CalE3
C 01006 Prenyltransferases [BR:ppht01006]
D GA004_12730 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GA004_06805 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GA004_00420 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GA004_15105 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GA004_15910 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GA004_14765 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GA004_13200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ppht01007]
D GA004_05545 tRNA glutamyl-Q synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_06030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_06025 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GA004_14985 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GA004_10210 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GA004_10945 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GA004_11775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GA004_08530 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GA004_14635 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GA004_06075 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GA004_05955 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GA004_09540 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GA004_14625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GA004_15870 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GA004_17280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GA004_02095 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GA004_12140 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GA004_14445 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GA004_10950 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GA004_14885 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GA004_08500 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GA004_08505 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GA004_02220 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GA004_05890 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D GA004_16885 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-]
D GA004_16585 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_00180 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GA004_01055 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GA004_06795 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GA004_03535 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GA004_01845 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GA004_01070 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GA004_12435 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GA004_12945 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_06895 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GA004_15750 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D GA004_06840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GA004_13725 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450 [BR:ppht00199]
C 00194 Photosynthesis proteins [BR:ppht00194]
D GA004_02020 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GA004_02015 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GA004_02010 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GA004_02005 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GA004_01995 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GA004_01990 ATPase K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GA004_01985 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ppht03000]
D GA004_00855 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GA004_08270 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GA004_09360 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GA004_11730 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GA004_06050 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GA004_11150 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D GA004_07945 transcriptional repressor K09826 irr; Fur family transcriptional regulator, iron response regulator
D GA004_13650 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D GA004_01430 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D GA004_02380 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D GA004_05795 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GA004_16865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GA004_01590 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH
D GA004_15085 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GA004_14785 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D GA004_12560 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D GA004_16525 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D GA004_06590 mraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ppht03021]
D GA004_15070 DEAD/DEAH box helicase family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D GA004_16610 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GA004_16765 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GA004_16760 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GA004_12160 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GA004_07865 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GA004_08120 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_08660 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_10075 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_13275 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_15615 sigZ; RNA polymerase sigma factor SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_01140 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_01295 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_00425 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GA004_17305 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GA004_16285 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D GA004_00965 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D GA004_16110 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GA004_03595 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GA004_16790 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GA004_03065 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D GA004_12560 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D GA004_09255 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GA004_06440 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ppht03019]
D GA004_00880 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D GA004_09005 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GA004_00565 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GA004_15325 RNB domain-containing ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GA004_14510 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GA004_12090 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GA004_00525 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GA004_08595 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GA004_04000 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GA004_00750 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GA004_05140 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GA004_08890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GA004_06850 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GA004_09255 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GA004_06440 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GA004_14335 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GA004_14325 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GA004_14570 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GA004_16215 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D GA004_02995 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D GA004_06760 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ppht03011]
D GA004_10450 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GA004_12080 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GA004_16695 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GA004_16615 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GA004_16640 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GA004_15370 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GA004_16740 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GA004_16655 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GA004_01865 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GA004_16730 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GA004_16620 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GA004_16745 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GA004_16625 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GA004_16660 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GA004_06855 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GA004_16000 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GA004_16680 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GA004_00160 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GA004_16705 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GA004_00480 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GA004_14825 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GA004_16780 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GA004_16710 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GA004_16725 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GA004_16720 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GA004_16665 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GA004_16650 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GA004_15360 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GA004_16775 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GA004_16785 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GA004_16770 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GA004_01870 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GA004_16675 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GA004_16635 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GA004_16690 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GA004_16605 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GA004_16645 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GA004_15990 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GA004_08495 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GA004_12345 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GA004_16700 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GA004_16715 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GA004_16670 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GA004_12350 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GA004_06085 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GA004_16685 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GA004_14775 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GA004_14530 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GA004_10435 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GA004_00820 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GA004_08490 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GA004_14780 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GA004_15380 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D GA004_17845 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ppht03009]
D GA004_09005 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GA004_14510 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GA004_13350 era; GTPase Era K03595 era; GTPase
D GA004_06920 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D GA004_12560 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D GA004_16110 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GA004_03595 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GA004_16790 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GA004_17375 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GA004_14740 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GA004_17765 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GA004_01265 RsmD family RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GA004_00055 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GA004_01270 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GA004_10520 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GA004_06600 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GA004_08550 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GA004_16080 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GA004_14565 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D GA004_15270 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D GA004_10550 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GA004_02190 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GA004_11220 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GA004_13050 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GA004_06405 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GA004_00475 hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D GA004_13235 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GA004_14605 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GA004_00990 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GA004_05145 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GA004_17890 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GA004_00880 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D GA004_08300 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GA004_08595 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GA004_04000 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GA004_16880 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D GA004_12455 hflX; GTPase HflX K03665 hflX; GTPase
D GA004_00165 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GA004_16100 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D GA004_03460 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D GA004_03150 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D GA004_03040 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D GA004_14600 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D GA004_16005 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:ppht03016]
D GA004_08040 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D GA004_01890 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GA004_05545 tRNA glutamyl-Q synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_06030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_14445 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GA004_14635 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GA004_05955 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GA004_08530 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GA004_06025 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GA004_11775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GA004_09540 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GA004_14625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GA004_14885 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GA004_15870 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GA004_02095 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GA004_10950 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GA004_12140 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GA004_10945 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GA004_06075 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GA004_17280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GA004_08500 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GA004_08505 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GA004_14985 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GA004_10210 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GA004_17325 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GA004_16535 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GA004_01975 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GA004_08305 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GA004_16090 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GA004_00165 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GA004_15910 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GA004_01955 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GA004_01960 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GA004_06740 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D GA004_00825 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GA004_02615 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GA004_01465 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D GA004_07985 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GA004_00740 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GA004_01160 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GA004_09235 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D GA004_01170 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D GA004_01175 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D GA004_15995 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GA004_12145 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GA004_03095 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D GA004_03415 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D GA004_02965 hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D GA004_11220 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GA004_13050 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GA004_04115 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GA004_07900 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D GA004_02880 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D GA004_08980 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GA004_07785 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GA004_09620 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GA004_07795 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GA004_15855 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GA004_14400 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D GA004_16515 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GA004_12135 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GA004_06100 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GA004_09220 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GA004_13310 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D GA004_15325 RNB domain-containing ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GA004_06850 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ppht03012]
D GA004_10560 translation initiation factor K03113 EIF1; translation initiation factor 1
D GA004_16105 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GA004_07905 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GA004_12470 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GA004_00540 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GA004_05130 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GA004_12075 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D GA004_16805 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GA004_14970 fusA; elongation factor G K02355 fusA; elongation factor G
D GA004_16735 fusA; elongation factor G K02355 fusA; elongation factor G
D GA004_16025 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GA004_17550 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D GA004_16020 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GA004_15375 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GA004_07990 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GA004_11765 efp; elongation factor P K02356 efp; elongation factor P
D GA004_15060 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GA004_13100 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ppht03110]
D GA004_10275 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GA004_06910 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D GA004_12585 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GA004_17290 AAA family ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GA004_15890 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GA004_14335 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GA004_14325 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GA004_17905 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GA004_17910 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GA004_03540 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D GA004_00870 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D GA004_14330 co-chaperone GroES K04078 groES; chaperonin GroES
D GA004_05960 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GA004_12130 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GA004_01985 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GA004_02430 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GA004_15465 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GA004_14270 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GA004_08620 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D GA004_14475 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D GA004_08995 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D GA004_14760 trxA; thioredoxin K03671 TXN; thioredoxin
D GA004_08945 hypothetical protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:ppht04131]
D GA004_06425 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GA004_04135 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GA004_05855 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GA004_15890 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ppht03051]
D GA004_15890 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ppht03032]
D GA004_05240 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GA004_00855 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GA004_17285 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D GA004_02890 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GA004_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GA004_15355 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GA004_07870 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GA004_15365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GA004_14835 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GA004_01915 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GA004_12965 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GA004_09300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GA004_14810 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GA004_14815 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D GA004_00015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GA004_00510 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GA004_00505 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GA004_14250 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GA004_14245 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GA004_13260 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D GA004_14925 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ppht03036]
D GA004_00855 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GA004_09005 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GA004_17285 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D GA004_02890 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GA004_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GA004_15050 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D GA004_14745 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D GA004_06665 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GA004_17210 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D GA004_06610 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GA004_17925 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GA004_06640 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D GA004_06670 cell division FtsZ family protein K03531 ftsZ; cell division protein FtsZ
D GA004_05220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GA004_07855 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GA004_06255 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GA004_07850 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GA004_00875 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D GA004_09010 ParA family protein K03496 parA; chromosome partitioning protein
D GA004_16865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GA004_14250 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GA004_14245 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GA004_01960 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GA004_10520 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GA004_17360 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D GA004_07995 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GA004_10425 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:ppht03400]
D GA004_15520 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GA004_17235 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GA004_00755 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D GA004_05635 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D GA004_04210 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D GA004_01025 single-stranded DNA-binding protein K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
D GA004_14820 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GA004_17570 DNA-binding protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D GA004_06885 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GA004_15070 DEAD/DEAH box helicase family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D GA004_17010 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GA004_00645 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GA004_02800 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D GA004_06235 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GA004_06190 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GA004_00385 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GA004_08915 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GA004_00015 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GA004_13970 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GA004_17335 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GA004_09505 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GA004_17560 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GA004_16765 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GA004_16760 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GA004_16610 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GA004_12160 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GA004_09000 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GA004_14725 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GA004_08860 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GA004_02930 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GA004_09645 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GA004_14835 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GA004_01915 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GA004_12965 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GA004_09300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GA004_15365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GA004_08635 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GA004_08640 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GA004_08630 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GA004_14375 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GA004_01950 recA; recombinase RecA K03553 recA; recombination protein RecA
D GA004_08130 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GA004_16845 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GA004_13285 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GA004_06055 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GA004_07800 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GA004_12390 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D GA004_06770 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GA004_01405 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD
D GA004_00510 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GA004_00505 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GA004_17285 integration host factor subunit beta K03530 hupB; DNA-binding protein HU-beta
D GA004_02890 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GA004_00750 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GA004_05140 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GA004_03090 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GA004_17390 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GA004_14990 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D GA004_14340 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D GA004_16965 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GA004_05755 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GA004_05760 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GA004_16095 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ppht03029]
D GA004_16105 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GA004_07905 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GA004_12075 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D GA004_16805 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GA004_14970 fusA; elongation factor G K02355 fusA; elongation factor G
D GA004_16735 fusA; elongation factor G K02355 fusA; elongation factor G
D GA004_13350 era; GTPase Era K03595 era; GTPase
D GA004_14985 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GA004_05955 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GA004_14625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GA004_02095 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D GA004_11775 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GA004_08515 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_09170 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_09175 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_13855 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GA004_08520 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GA004_08510 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GA004_15365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GA004_15350 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GA004_14335 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GA004_17910 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GA004_14325 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GA004_14330 co-chaperone GroES K04078 groES; chaperonin GroES
D GA004_17905 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GA004_10425 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GA004_13200 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D GA004_13195 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D GA004_00830 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GA004_15190 SCO family protein K07152 SCO1; protein SCO1
D GA004_15890 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ppht02000]
D GA004_17830 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GA004_05695 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GA004_02980 ABC transporter ATP-binding protein/permease K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D GA004_15540 ABC transporter ATP-binding protein/permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GA004_15535 ABC transporter ATP-binding protein/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GA004_05425 ABC transporter ATP-binding protein/permease K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D GA004_15775 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D GA004_06725 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D GA004_00610 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D GA004_06455 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GA004_06460 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D GA004_06465 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GA004_13415 modF; molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein
D GA004_10705 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D GA004_10710 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D GA004_10715 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D GA004_16145 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GA004_07575 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_10615 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_02455 sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_06120 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D GA004_07570 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D GA004_10625 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D GA004_02445 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D GA004_07565 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GA004_10620 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GA004_02450 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D GA004_01305 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D GA004_01310 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D GA004_10370 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GA004_10360 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GA004_10365 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GA004_10375 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GA004_10135 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D GA004_10130 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D GA004_06135 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GA004_06145 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GA004_06150 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GA004_15565 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GA004_15705 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GA004_15550 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D GA004_15555 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D GA004_15560 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GA004_10405 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GA004_10410 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D GA004_10415 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GA004_17810 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GA004_17820 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GA004_17825 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GA004_05525 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GA004_05530 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GA004_03555 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GA004_03560 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D GA004_03565 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein
D GA004_03570 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GA004_03320 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D GA004_03325 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D GA004_03330 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D GA004_03405 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D GA004_03395 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D GA004_03390 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D GA004_03400 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D GA004_02025 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D GA004_02030 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D GA004_10545 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D GA004_15875 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D GA004_17985 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GA004_03575 ABC transporter permease K09696 natB; sodium transport system permease protein
D GA004_03580 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GA004_16040 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D GA004_05780 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D GA004_16035 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D GA004_05785 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D GA004_16045 Gldg family protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D GA004_05775 GldG family protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D GA004_09545 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D GA004_06325 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D GA004_09550 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GA004_00245 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GA004_06330 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GA004_09470 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GA004_09745 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GA004_10030 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GA004_02405 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GA004_05645 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GA004_09740 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GA004_02400 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GA004_05640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GA004_07940 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GA004_13805 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D GA004_09840 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D GA004_03180 Na/Pi symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D GA004_13405 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D GA004_05125 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D GA004_17780 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GA004_07960 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D GA004_08940 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GA004_14620 ammonium transporter K03320 amt; ammonium transporter, Amt family
D GA004_07600 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D GA004_09585 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D GA004_15920 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D GA004_03545 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D GA004_03515 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D GA004_16280 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GA004_16275 hypothetical protein K02557 motB; chemotaxis protein MotB
D GA004_10500 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_10505 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_11850 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_13880 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_13885 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_15290 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_16825 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_01260 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_02635 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_02640 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D GA004_08845 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_08850 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_09515 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_09520 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_10495 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_13875 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_15285 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_15725 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_16820 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_02645 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GA004_15730 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D GA004_07915 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D GA004_14290 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GA004_00175 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GA004_15265 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D GA004_03315 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D GA004_07165 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GA004_09375 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GA004_00225 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GA004_02665 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GA004_04985 TonB-dependent receptor plug domain-containing protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GA004_11055 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
D GA004_06735 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D GA004_01770 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D GA004_15350 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GA004_07450 PQQ-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D GA004_00220 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D GA004_02585 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D GA004_11020 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D GA004_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GA004_10530 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D GA004_08880 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D GA004_03940 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D GA004_14955 L-lactate permease K03303 lutP; lactate permease
D GA004_13305 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D GA004_12630 hypothetical protein K14392 panF; sodium/pantothenate symporter
D GA004_13790 sodium:solute symporter family protein K14392 panF; sodium/pantothenate symporter
D GA004_08590 cation acetate symporter K14393 actP; cation/acetate symporter
D GA004_07425 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D GA004_11080 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D GA004_13800 uracil-xanthine permease K16345 xanP; xanthine permease XanP
D GA004_13675 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GA004_13680 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GA004_13830 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GA004_00205 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D GA004_01495 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter
D GA004_17420 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D GA004_07065 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D GA004_07060 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D GA004_07040 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GA004_07050 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GA004_07055 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D GA004_07085 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D GA004_07080 pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D GA004_07075 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D GA004_06830 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GA004_11240 AEC family transporter K24180 mleP; malate permease and related proteins
D GA004_11490 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D GA004_11480 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D GA004_03360 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D GA004_13775 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D GA004_06640 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D GA004_08005 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D GA004_11010 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D GA004_06720 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D GA004_05220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GA004_05375 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D GA004_04285 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D GA004_04290 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D GA004_05305 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D GA004_13750 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:ppht02044]
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
D GA004_06725 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D GA004_06720 HlyD family efflux transporter periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D GA004_06735 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D GA004_17215 AAA family ATPase K02450 gspA; general secretion pathway protein A
D GA004_06300 hypothetical protein K02453 gspD; general secretion pathway protein D
D GA004_06310 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D GA004_09265 hypothetical protein K02456 gspG; general secretion pathway protein G
D GA004_03140 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G
D GA004_06265 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D GA004_02900 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GA004_07100 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D GA004_06445 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D GA004_06930 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D GA004_07105 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_11735 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_01805 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_06315 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_00445 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D GA004_06450 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GA004_16300 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GA004_16305 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D GA004_16385 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GA004_16370 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GA004_16330 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GA004_16320 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GA004_16315 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GA004_16310 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GA004_16500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GA004_08910 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D GA004_16795 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GA004_05895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GA004_16630 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GA004_16895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GA004_03600 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GA004_08905 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GA004_00830 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GA004_07860 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D GA004_12445 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ppht02042]
D GA004_14290 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GA004_00175 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:ppht02022]
D GA004_15650 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GA004_01970 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GA004_01965 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GA004_15655 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D GA004_10460 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D GA004_15660 response regulator transcription factor K07664 baeR; two-component system, OmpR family, response regulator BaeR
D GA004_01765 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D GA004_02810 sigma-54 dependent transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator
C 02035 Bacterial motility proteins [BR:ppht02035]
D GA004_00675 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D GA004_00680 hypothetical protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D GA004_16370 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D GA004_16365 hypothetical protein K02413 fliJ; flagellar protein FliJ
D GA004_16320 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D GA004_16315 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D GA004_16310 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D GA004_16300 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D GA004_16305 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D GA004_16380 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D GA004_16335 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D GA004_16330 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D GA004_16385 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D GA004_16245 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D GA004_16250 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D GA004_16390 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D GA004_16400 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D GA004_16395 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D GA004_16350 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D GA004_16265 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D GA004_16260 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D GA004_16345 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D GA004_16230 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D GA004_16225 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D GA004_16210 flagellin K02406 fliC; flagellin
D GA004_05975 flagellin K02406 fliC; flagellin
D GA004_05980 flagellin K02406 fliC; flagellin
D GA004_05995 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D GA004_06010 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D GA004_16285 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D GA004_16280 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D GA004_16275 hypothetical protein K02557 motB; chemotaxis protein MotB
D GA004_16220 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D GA004_06450 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D GA004_07100 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D GA004_06445 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D GA004_06930 GspE/PulE family protein K02652 pilB; type IV pilus assembly protein PilB
D GA004_07105 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_11735 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_01805 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_06315 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GA004_02900 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GA004_00445 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ppht04812]
D GA004_07855 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GA004_06255 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GA004_06670 cell division FtsZ family protein K03531 ftsZ; cell division protein FtsZ
D GA004_06665 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GA004_09010 ParA family protein K03496 parA; chromosome partitioning protein
D GA004_16865 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ppht04147]
D GA004_15890 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D GA004_08890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GA004_04135 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GA004_04140 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GA004_05855 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GA004_02430 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D GA004_05290 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D GA004_14325 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GA004_14335 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GA004_08565 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GA004_07740 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_11615 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_12270 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_13125 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_00890 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_04540 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D GA004_14355 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GA004_16805 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GA004_16535 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GA004_13805 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D GA004_00605 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GA004_03180 Na/Pi symporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D GA004_04180 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GA004_08855 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GA004_01835 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GA004_02895 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GA004_14730 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D GA004_14275 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GA004_08950 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GA004_10940 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GA004_17270 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D GA004_08170 hypothetical protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GA004_09780 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GA004_09650 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D GA004_13955 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GA004_15030 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GA004_04145 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GA004_11445 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:ppht02048]
D GA004_00855 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GA004_06670 cell division FtsZ family protein K03531 ftsZ; cell division protein FtsZ
D GA004_07855 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GA004_06255 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GA004_14250 DNA gyrase/topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GA004_14245 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GA004_05545 tRNA glutamyl-Q synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GA004_06030 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ppht01504]
D GA004_02380 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D GA004_05220 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GA004_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GA004_11810 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppht00537]
D GA004_05290 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ppht03100]
D GA004_17855 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GA004_17845 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GA004_01505 NAD-dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D GA004_09815 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D GA004_11385 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D GA004_14185 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D GA004_17155 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D GA004_05090 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D GA004_05095 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D GA004_06955 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D GA004_10855 NAD(P)-binding protein K18208 RNLS; renalase [EC:1.6.3.5]
D GA004_15150 2-enoyl thioester reductase domain-containing protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D GA004_13425 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D GA004_01030 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D GA004_08250 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D GA004_07500 cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D GA004_11190 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GA004_01075 redoxin domain-containing protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GA004_14670 redoxin domain-containing protein K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D GA004_12745 Brp/Blh family beta-carotene 15,15'-dioxygenase K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D GA004_16410 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D GA004_17425 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D GA004_17650 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D GA004_17655 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D GA004_17590 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D GA004_01040 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D GA004_15445 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D GA004_03245 bshA; N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D GA004_04310 larB; nickel pincer cofactor biosynthesis protein LarB K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D GA004_14295 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GA004_09755 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GA004_01340 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GA004_05915 phosphate--AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D GA004_05070 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D GA004_17205 UDPGP type 1 family protein K11442 K11442; putative uridylyltransferase [EC:2.7.7.-]
D GA004_17990 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D GA004_06905 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D GA004_09905 aryl-sulfate sulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22]
D GA004_17745 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D GA004_05165 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D GA004_13605 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D GA004_14395 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GA004_00260 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GA004_05560 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D GA004_10345 sulfatase-like hydrolase/transferase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D GA004_05075 sulfatase-like hydrolase/transferase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D GA004_07235 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D GA004_09705 sulfatase-like hydrolase/transferase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D GA004_13910 sulfatase-like hydrolase/transferase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D GA004_03200 sulfatase-like hydrolase/transferase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D GA004_07955 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GA004_10535 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GA004_14720 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D GA004_05180 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170]
D GA004_04265 glycosyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D GA004_16435 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GA004_03240 PIG-L family deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D GA004_13730 amidohydrolase family protein K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D GA004_07585 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GA004_07825 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GA004_09595 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GA004_10195 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GA004_13155 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GA004_04785 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D GA004_12610 low molecular weight protein arginine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D GA004_15440 alpha/beta fold hydrolase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D GA004_16545 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D GA004_04315 larE; ATP-dependent sacrificial sulfur transferase LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D GA004_04305 larC; nickel pincer cofactor biosynthesis protein LarC K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D GA004_10630 fucU; L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D GA004_11720 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D GA004_13075 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D GA004_14265 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D GA004_08715 sugar phosphate isomerase/epimerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D GA004_05275 TIM barrel protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D GA004_01455 AMP-binding protein K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D GA004_06060 Mur ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
C 99981 Carbohydrate metabolism
D GA004_09810 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D GA004_11540 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D GA004_00535 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D GA004_07070 DUF4040 domain-containing protein K14113 ehbD; energy-converting hydrogenase B subunit D
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GA004_00650 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D GA004_07385 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D GA004_12820 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D GA004_05005 aldolase K23376 sbnG; staphyloferrin B biosynthesis citrate synthase
C 99999 Others
D GA004_00140 DoxX family protein K15977 K15977; putative oxidoreductase
D GA004_04225 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GA004_13105 cold-shock protein K03704 cspA; cold shock protein
D GA004_14615 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D GA004_13315 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D GA004_14440 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D GA004_06900 UvrB/UvrC motif-containing protein K19411 mcsA; protein arginine kinase activator
D GA004_12595 tig; trigger factor K03545 tig; trigger factor
D GA004_08245 ferric reductase-like transmembrane domain-containing protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D GA004_12155 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GA004_06430 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D GA004_00980 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein
D GA004_13705 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D GA004_02130 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D GA004_08990 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GA004_01425 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D GA004_15035 YraN family protein K07460 yraN; putative endonuclease
D GA004_16540 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D GA004_02335 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D GA004_06745 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D GA004_13525 transposase K07497 K07497; putative transposase
D GA004_15765 hypothetical protein K07497 K07497; putative transposase
D GA004_15940 helix-turn-helix domain containing protein K07497 K07497; putative transposase
D GA004_04640 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D GA004_12395 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GA004_11440 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D GA004_06535 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D GA004_06540 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D GA004_13550 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D GA004_09355 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_09365 sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_09965 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_00305 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_03355 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_04970 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_05310 sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D GA004_09430 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GA004_00595 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D GA004_15425 Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D GA004_05925 carbon starvation protein A K06200 cstA; carbon starvation protein
D GA004_06755 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D GA004_05565 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GA004_16440 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D GA004_10380 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D GA004_02940 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D GA004_02945 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D GA004_00185 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D GA004_06155 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D GA004_12165 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D GA004_15975 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D GA004_15575 ATP-binding cassette domain-containing protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D GA004_08160 ApaG domain K06195 apaG; ApaG protein
D GA004_02390 iron-regulated protein K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GA004_15510 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D GA004_02960 HAD hydrolase-like protein K07025 K07025; putative hydrolase of the HAD superfamily
D GA004_06580 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D GA004_17300 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D GA004_07935 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D GA004_07930 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D GA004_07760 metal-dependent hydrolase K07038 K07038; inner membrane protein
D GA004_02195 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D GA004_03035 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D GA004_16455 SlyX family protein K03745 slyX; SlyX protein
D GA004_13960 phage holin family protein K08972 K08972; putative membrane protein
D GA004_13205 DUF420 domain-containing protein K08976 K08976; putative membrane protein
D GA004_07750 SecC motif-containing protein K09858 K09858; SEC-C motif domain protein
D GA004_11430 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
C 99997 Function unknown
D GA004_13375 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D GA004_06820 AAA family ATPase K06873 K06873; uncharacterized protein
D GA004_17275 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D GA004_03290 lysophospholipase K06889 K06889; uncharacterized protein
D GA004_08085 hypothetical protein K06893 K06893; uncharacterized protein
D GA004_09635 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D GA004_03965 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D GA004_17640 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D GA004_16125 NYN domain-containing protein K06962 K06962; uncharacterized protein
D GA004_15135 zinc metallopeptidase K06973 K06973; uncharacterized protein
D GA004_03520 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D GA004_09950 TatD family hydrolase K07051 K07051; uncharacterized protein
D GA004_15005 hypothetical protein K07064 K07064; uncharacterized protein
D GA004_15315 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D GA004_10290 aldo/keto reductase K07079 K07079; uncharacterized protein
D GA004_04935 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D GA004_03005 permease K07089 K07089; uncharacterized protein
D GA004_13290 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D GA004_12460 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D GA004_10115 metallophosphoesterase K07098 K07098; uncharacterized protein
D GA004_03915 hypoxanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D GA004_03920 phosphoribosyltransferase domain-containing protein K07101 K07101; uncharacterized protein
D GA004_00580 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D GA004_11400 sel1 repeat family protein K07126 K07126; uncharacterized protein
D GA004_13035 sel1 repeat family protein K07126 K07126; uncharacterized protein
D GA004_14315 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D GA004_09980 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D GA004_00495 hypothetical protein K07164 K07164; uncharacterized protein
D GA004_02210 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D GA004_05945 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D GA004_07110 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D GA004_11200 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D GA004_12940 DUF2071 domain-containing protein K09166 K09166; uncharacterized protein
D GA004_17645 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D GA004_03270 cupin domain-containing protein K09705 K09705; uncharacterized protein
D GA004_15395 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D GA004_10150 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D GA004_11230 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D GA004_13460 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D GA004_12570 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D GA004_15185 YdbL family protein K09978 K09978; uncharacterized protein
D GA004_11205 ThuA domain-containing protein K09992 K09992; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024