+D GENES KO
#
KEGG Orthology (KO) - Paenibacillus polymyxa M1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ppo00010]
D PPM_0369 glcK3; putative sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0161 glcK1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_1243 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_2179 fbp; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PPM_0133 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PPM_0172 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PPM_0170 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PPM_0171 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PPM_0105 gpmA1; phosphoglycerate mutase family protein,putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4994 pgm3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4820 gpmA3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_0173 pgm1; phosphoglyceratemutase,2, 3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PPM_0174 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PPM_1564 pykA3; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_0316 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_2598 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PPM_2597 pdhB; pyruvate dehydrogenase complex E1 component,beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PPM_2596 pdhC; dihydrolipoamide S-acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PPM_0453 ldh1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2535 ldh3; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PPM_0308 adhA; alcohol dehydrogenase I K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_2358 adh3; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_0947 adhC1; NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_2520 gaLM; aldose 1-epimerase Galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PPM_4130 yoxA; hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_3953 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_2221 bglA1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_1611 bglH1; beta glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_3930 bglH5; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4883 ydhP; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_3609 bglH3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4158 bglH7; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4024 celH; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_0103 bglP3; PTS system, glucose-specific enzyme II, A component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PPM_3172 glcA; PTS system, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_3797 ptsG3; PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ppo00020]
D PPM_1574 citZ; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PPM_0744 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PPM_1575 citC; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PPM_1321 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PPM_1322 odhB; 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_1874 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PPM_1873 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PPM_4071 sdhA3; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PPM_4070 sdhB3; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PPM_4072 sdhC; succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PPM_2517 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PPM_4998 mqo1; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PPM_2598 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PPM_2597 pdhB; pyruvate dehydrogenase complex E1 component,beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PPM_2596 pdhC; dihydrolipoamide S-acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:ppo00030]
D PPM_1243 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PPM_2036 zwf1; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PPM_4184 zwf3; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PPM_0467 ykgB1; 6-phosphogluconolactonase 6-P-gluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PPM_2041 ykgB3; 6-phosphogluconolactonase 6-P-gluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PPM_2037 gnd1; 6-phosphogluconate dehydrogenase family protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PPM_3176 gnd3; 6-phosphogluconatedehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PPM_3124 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PPM_1240 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_4160 M1_4571; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_4161 M1_4572; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_1802 talC; transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PPM_1809 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PPM_4826 hxlA; 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D PPM_4827 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PPM_0243 xfp; putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D PPM_4355 dra; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PPM_2555 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PPM_4352 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_0034 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PPM_4785 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PPM_0456 gntK1; gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D PPM_4981 gntK3; gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D PPM_4787 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PPM_0133 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PPM_2179 fbp; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ppo00040]
D PPM_3251 PME2; Pectinesterase-2 PE 2 K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D PPM_3731 pel1; pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D PPM_0875 yvpA; pectate lyase Flags: Precursor K19551 pelC; pectate lyase C [EC:4.2.2.2 4.2.2.10]
D PPM_3719 kdgF; Pectin degradation protein kdgF K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D PPM_4786 kduI; 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PPM_4784 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D PPM_2053 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PPM_2057 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D PPM_2058 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D PPM_2330 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D PPM_2329 uxuB; fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D PPM_2435 gusB; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D PPM_1104 ugdH; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_1122 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_0349 yngB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_1093 gtaB1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4510 gtaB3; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_5002 araD3; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PPM_3124 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PPM_5001 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D PPM_4271 xylB1; xylose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PPM_4272 xylA3; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PPM_2160 xylA1; putative sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D PPM_2161 yulC; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D PPM_4914 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D PPM_4916 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D PPM_2326 gutB; hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PPM_2025 M1_2306; oxidoreductase K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
C 00051 Fructose and mannose metabolism [PATH:ppo00051]
D PPM_0459 ydhT1; chW repeat-containing mannanase ManB K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_1107 manA5; mannan endo-1,4-beta-mannosidase A K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_0613 manA3; mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_3238 ydhT3; mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_4528 celA7; glycoside hydrolase family protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_2466 celN; glycoside hydrolase family 5 domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_0557 maNB; mannan endo-1,4-beta-mannosidase B K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_1372 ydhR; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PPM_1325 manA1; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PPM_2201 manC3; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_3935 manC5; mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_1106 manC1; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_1115 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PPM_1114 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PPM_4915 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D PPM_2160 xylA1; putative sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D PPM_2161 yulC; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D PPM_4914 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D PPM_4916 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_2179 fbp; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PPM_3787 mtlD; mannitol-1-phosphate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D PPM_1604 fruB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D PPM_2326 gutB; hypothetical protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PPM_4272 xylA3; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D PPM_0133 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PPM_0172 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PPM_0969 sacC1; levanase1 K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D PPM_2439 sacC5; glycosyl hydrolase family 32 domain protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D PPM_2437 scrB1; beta-fructofuranosidase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D PPM_1605 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PPM_0443 manX1; PTS enzyme IIAB, mannose-specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PPM_0444 manX3; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PPM_0445 sorA; sorbose permease IIC component PTS system sorbose-specific EIIC component; EIIC-Sor K02795 manY; mannose PTS system EIIC component
D PPM_0446 manZ; mannose permease IID component PTS system mannose-specific EIID component; EIID-Man; EII-M-Man K02796 manZ; mannose PTS system EIID component
D PPM_4972 manP; PTS system, mannose-specific IIA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D PPM_3788 mtlA1; PTS system, mannitol specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D PPM_3790 mtlA3; PTS system, mannitol-specific enzyme II, BC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:ppo00052]
D PPM_2520 gaLM; aldose 1-epimerase Galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PPM_4130 yoxA; hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PPM_0996 galK1; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PPM_3804 galK3; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PPM_3802 galT; galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PPM_4026 galE3; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_4503 galE5; NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_3803 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_0349 yngB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_1093 gtaB1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4510 gtaB3; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_0369 glcK3; putative sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0161 glcK1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0265 lacZ1; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PPM_0616 M1-797; glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PPM_1830 pbg; beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PPM_0660 lacZ3; beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PPM_3198 lacA; beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PPM_0958 melA5; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D PPM_0727 melA3; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_0551 melA1; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2298 melA9; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2475 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2208 M1_2499; glycosyl hydrolase family 27 (alpha-galactosidase/melibiase) K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_4650 lacC; tagatose 6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_0313 scrB3; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_1041 sacA; beta-fructofuranosidase (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_2381 cscA; beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_4390 scrB5; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_2438 scrB2; beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_0433 malL; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:ppo00053]
D PPM_1104 ugdH; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_1122 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_2435 gusB; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D PPM_3720 sgaT; Ascorbate-specific permease IIC component ulaA Ascorbate-specific PTS system EIIC component K03475 ulaA; ascorbate PTS system EIIC component
D PPM_5002 araD3; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_3475 agmE; ADP-L-glycero-D-manno-heptose-6-epimerase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:ppo00500]
D PPM_1039 scrA5; PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0728 scrA3; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0314 scrA1; putative sucrose-specific PTS permease, enzyme II K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0313 scrB3; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_1041 sacA; beta-fructofuranosidase (levanase/invertase) K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_2381 cscA; beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_4390 scrB5; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_2438 scrB2; beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PPM_0698 sacB; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D PPM_0699 sacC3; levanase K01212 sacC; levanase [EC:3.2.1.65]
D PPM_0970 sacC2; levanase2 K01212 sacC; levanase [EC:3.2.1.65]
D PPM_0349 yngB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_1093 gtaB1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4510 gtaB3; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_0334 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_0898 bglB; beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_1040 bglC1; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_4730 M1_5171; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_3914 bglA7; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_4291 bgl; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_2317 celA1; cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_3722 celA3; cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_3757 bglC5; endo-1,4-beta-glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_5029 celC; cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_2417 celE1; endoglucanase E Endo-1,4-beta-glucanase E; EgE; Cellulase E; Flags: Precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_0982 guxA; 1,4-beta-cellobiosidase K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D PPM_2272 chvB3; cyclic beta 1-2 glucan synthetase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D PPM_4022 lacF9; Lactose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4885 ydhN3; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4164 licA3; Lactose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4025 celA5; PTS system lactose-specific EIICB component EIICB-Lac K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4886 ydhM; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4165 lacEIICB; PTS system lactose-specific EIICB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4023 licC; PTS system lactose-specific EIICB component EIICB-Lac K02761 celB; cellobiose PTS system EIIC component
D PPM_4884 ydhO3; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PPM_4166 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PPM_3953 celF; 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_2221 bglA1; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_1611 bglH1; beta glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_3930 bglH5; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4883 ydhP; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_3609 bglH3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4158 bglH7; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4024 celH; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PPM_4568 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PPM_2069 glgC1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PPM_2070 glgD; glycogen biosynthesis protein GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PPM_2583 glgC3; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PPM_2581 glgA3; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PPM_2582 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PPM_2071 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PPM_3784 pulA; pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D PPM_4861 amyB7; beta-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PPM_4819 amyL; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PPM_2305 amyY; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PPM_0447 nplT; alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D PPM_0433 malL; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D PPM_0285 yvdK; maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D PPM_0284 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D PPM_0103 bglP3; PTS system, glucose-specific enzyme II, A component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PPM_0287 ptsG1; PTS system, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D PPM_0288 M1-449; endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D PPM_0628 treP; PTS system, trehalose-specific enzyme II, BC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PPM_0627 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_0369 glcK3; putative sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0161 glcK1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_1243 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PPM_1372 ydhR; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppo00520]
D PPM_3647 csn; peptidoglycan-binding LysM K01233 csn; chitosanase [EC:3.2.1.132]
D PPM_0103 bglP3; PTS system, glucose-specific enzyme II, A component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PPM_3919 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PPM_4001 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PPM_4000 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PPM_1372 ydhR; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PPM_4407 glmS; glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PPM_4408 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PPM_0033 gcaD; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PPM_0134 murZ; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_3353 murA3; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_4612 murA5; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_3354 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PPM_0367 nanE; putative N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PPM_4034 capG; capsular polysaccharide synthesis enzyme Cap5G K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PPM_4625 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PPM_3970 wecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D PPM_4033 capD; putative UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PPM_0344 abfA; alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PPM_3074 xsa; alpha-L-arabinosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PPM_2373 xynD3; arabinoxylan arabinofuranohydrolase K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D PPM_3250 xynB1; xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D PPM_4859 xylA5; xylan 1,4-beta-xylosidase K22268 xylA; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D PPM_3172 glcA; PTS system, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_3797 ptsG3; PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_0369 glcK3; putative sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0161 glcK1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_0349 yngB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_1093 gtaB1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4510 gtaB3; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_1104 ugdH; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_1122 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_0996 galK1; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PPM_3804 galK3; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PPM_3802 galT; galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PPM_4026 galE3; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_4503 galE5; NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_3803 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_0443 manX1; PTS enzyme IIAB, mannose-specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PPM_0444 manX3; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PPM_0445 sorA; sorbose permease IIC component PTS system sorbose-specific EIIC component; EIIC-Sor K02795 manY; mannose PTS system EIIC component
D PPM_0446 manZ; mannose permease IID component PTS system mannose-specific EIID component; EIID-Man; EII-M-Man K02796 manZ; mannose PTS system EIID component
D PPM_1243 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PPM_1325 manA1; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PPM_2201 manC3; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_3935 manC5; mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_1106 manC1; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_1115 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PPM_1114 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PPM_4568 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PPM_4567 ddhB; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PPM_2069 glgC1; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PPM_2070 glgD; glycogen biosynthesis protein GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PPM_2583 glgC3; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ppo00620]
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PPM_2598 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PPM_2597 pdhB; pyruvate dehydrogenase complex E1 component,beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PPM_2596 pdhC; dihydrolipoamide S-acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3063 tdcE; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PPM_0308 adhA; alcohol dehydrogenase I K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_2358 adh3; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_0947 adhC1; NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PPM_2891 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PPM_1969 2242; hypothetical protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PPM_1564 pykA3; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_0316 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_1563 accA; acetyl-CoA carboxylase, carboxyl transferase,alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PPM_3037 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PPM_3036 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PPM_1562 accD; acetyl-CoA carboxylase, carboxyl transferase,beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_0453 ldh1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2535 ldh3; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2056 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PPM_0311 ytbE; oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D PPM_0809 yvgN; oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D PPM_4213 glxII; Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PPM_1277 me; malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3945 malS; putative malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3428 M1_3795; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3194 ykwA; malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PPM_4998 mqo1; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PPM_2517 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PPM_4413 pepC; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_1345 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PPM_1721 leuA3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PPM_2518 leuA5; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppo00630]
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PPM_1574 citZ; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PPM_0744 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_2500 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D PPM_3808 gph3; Phosphoglycolate phosphatase PGPase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PPM_1547 gph1; MTA/SAH nucleosidase / phosphatase, putative K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PPM_1391 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_2801 glnA3; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_4630 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PPM_3793 yqhJ; glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PPM_3794 yqhK; putative glycine dehydrogenase subunit 2, glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PPM_3792 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3791 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PPM_4978 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PPM_4785 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PPM_2217 oxdC; oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D PPM_3506 yjgC; formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PPM_1239 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:ppo00640]
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_2891 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PPM_1969 2242; hypothetical protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PPM_3009 bckE1; 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PPM_3008 dxpS; branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PPM_3007 bkdB; dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PPM_3063 tdcE; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PPM_4790 yhfP; quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D PPM_1563 accA; acetyl-CoA carboxylase, carboxyl transferase,alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PPM_3037 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PPM_3036 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PPM_1562 accD; acetyl-CoA carboxylase, carboxyl transferase,beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PPM_1873 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PPM_1874 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PPM_1574 citZ; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D PPM_0744 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PPM_0453 ldh1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2535 ldh3; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2908 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D PPM_2525 gldA1; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PPM_3239 gldA3; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PPM_3760 gldA5; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PPM_0311 ytbE; oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D PPM_0809 yvgN; oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:ppo00650]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_2892 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PPM_1661 M1_1918; putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PPM_3737 M1_4127; putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PPM_1144 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D PPM_1143 atoA; butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PPM_4071 sdhA3; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PPM_4070 sdhB3; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PPM_4072 sdhC; succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PPM_p0044 shmt1; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PPM_3063 tdcE; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PPM_1145 adc1; acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D PPM_2419 adc3; acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D PPM_0075 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1342 ilvB3; acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_2052 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1343 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PPM_2051 alsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D PPM_3657 adhB1; alcohol dehydrogenase, zinc-containing K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:ppo00660]
D PPM_0075 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1342 ilvB3; acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_2052 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1343 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PPM_2051 alsD; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D PPM_1873 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PPM_1874 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PPM_2861 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PPM_2860 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PPM_1346 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ppo00562]
D PPM_0749 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PPM_0252 phy; phytase domain protein K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D PPM_0866 yulF; hypothetical protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D PPM_2478 M1_2797; hypothetical protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D PPM_0172 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ppo00190]
D PPM_4104 yutJ; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PPM_4086 yumB; pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PPM_4815 ndh3; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PPM_4071 sdhA3; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PPM_4070 sdhB3; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PPM_4072 sdhC; succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PPM_4125 cyoE; protohaem IX farnesyltransferase (haem O biosynthesis) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PPM_4286 cyoD; Cytochrome o ubiquinol oxidase protein cyoD Cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D PPM_4113 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PPM_4288 cyoB; cytochrome o ubiquinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D PPM_4287 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D PPM_4289 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D PPM_4300 cydA3; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PPM_4257 cydA1; putative cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PPM_4299 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PPM_4256 cbdB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PPM_4618 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PPM_4616 atpD; F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PPM_4617 atpG; F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PPM_4619 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PPM_4615 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PPM_4622 atpB; F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PPM_4620 atpF; F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PPM_4621 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PPM_0356 ppaC; inorganic pyrophosphatase, manganese-dependent K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PPM_0147 hprP; hydrolase, haloacid dehalogenase-like family K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
D PPM_4091 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ppo00710]
D PPM_0171 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PPM_0170 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PPM_0133 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PPM_2179 fbp; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PPM_1240 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_4160 M1_4571; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_4161 M1_4572; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_1809 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PPM_0172 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PPM_3124 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PPM_1802 talC; transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PPM_4413 pepC; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ppo00720]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PPM_4413 pepC; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PPM_2517 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PPM_4071 sdhA3; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PPM_4070 sdhB3; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PPM_4072 sdhC; succinate dehydrogenase, cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PPM_1874 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PPM_1873 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_1575 citC; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PPM_0744 acnA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PPM_1563 accA; acetyl-CoA carboxylase, carboxyl transferase,alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PPM_3037 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PPM_3036 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PPM_1562 accD; acetyl-CoA carboxylase, carboxyl transferase,beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PPM_2863 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PPM_2865 hydA; NADH:ubiquinone oxidoreductase subunit K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D PPM_2864 yqfT; uncharacterized protein YgfT K25124 hycB; FeS-containing electron transfer protein
D PPM_2866 hydN; protein aegA K25124 hycB; FeS-containing electron transfer protein
D PPM_1191 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PPM_0860 folD1; methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PPM_3031 folD3; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PPM_0859 ftcd; formiminotetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D PPM_1969 2242; hypothetical protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PPM_2891 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ppo00680]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_3506 yjgC; formate dehydrogenase alpha chain K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D PPM_2863 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D PPM_2865 hydA; NADH:ubiquinone oxidoreductase subunit K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D PPM_2864 yqfT; uncharacterized protein YgfT K25124 hycB; FeS-containing electron transfer protein
D PPM_2866 hydN; protein aegA K25124 hycB; FeS-containing electron transfer protein
D PPM_4630 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PPM_0174 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PPM_4413 pepC; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PPM_0133 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PPM_2179 fbp; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_4827 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D PPM_4826 hxlA; 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D PPM_2891 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D PPM_0105 gpmA1; phosphoglycerate mutase family protein,putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4994 pgm3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4820 gpmA3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_0173 pgm1; phosphoglyceratemutase,2, 3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PPM_2969 serA3; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PPM_1392 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PPM_2691 ysaA; haloacid dehalogenase-like hydrolase domain-containing protein 3 K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ppo00910]
D PPM_3617 narK; Nitrite extrusion protein Nitrite facilitator K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PPM_3192 nasA; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PPM_3624 narG; nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3623 narH; respiratory nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3621 narI; nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3190 nasC; assimilatory nitrate reductase catalytic subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D PPM_3187 nasD1; bFD-like (2Fe-2S)-binding region K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D PPM_3191 nasD3; assimilatory nitrite reductase (subunit) K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D PPM_0633 nasB; nitrite reductase (NAD(P)H) large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D PPM_0634 nasE1; assimilatory nitrite reductase [NAD(P)H] small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D PPM_3186 nasE3; nitrite reductase K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D PPM_4515 nirA; ferredoxin-nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D PPM_1024 hcp; prismane protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D PPM_2348 npd; 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PPM_3663 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PPM_1391 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_2801 glnA3; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_1088 gltA; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PPM_2592 gltB; glutamate synthase (small subunit) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PPM_2823 ytiB; carbonic anhydrase, prokaryotic type, putative K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D PPM_0307 cah1; carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ppo00920]
D PPM_4346 sbp; Sulfate-binding protein Sulfate starvation-induced protein 2 K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PPM_4345 cysT5; putative sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PPM_4344 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PPM_1247 cysA; sulfate transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PPM_2088 ssuE; putative NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PPM_4420 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PPM_2501 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PPM_1934 mipP; putative manganese-dependent inorganic pyrophosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PPM_4421 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PPM_0827 M1-1022; hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D PPM_3528 TST; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PPM_4476 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PPM_0879 cysK3; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PPM_0060 cysK1; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PPM_3227 cysK5; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PPM_1375 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PPM_1376 metC1; cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PPM_2116 yrhB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ppo00061]
D PPM_1563 accA; acetyl-CoA carboxylase, carboxyl transferase,alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PPM_3037 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PPM_3036 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PPM_1562 accD; acetyl-CoA carboxylase, carboxyl transferase,beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PPM_1848 acpA; acyl carrier protein ACP K02078 acpP; acyl carrier protein
D PPM_1846 fabD3; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_0913 fabD1; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_2386 fabD5; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_1845 fabH3; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PPM_0778 fabH1; 3-oxoacyl-(acyl-carrier-protein) synthase III,putative K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PPM_3241 fabH5; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PPM_1849 fabF3; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_0076 fabF1; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_1748 fabFB; [acyl-carrier protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_1847 fabG5; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_1954 fabG7; [acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2312 M1_2611; [acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2558 fabG1; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4107 fabG11; 3-oxoacyl-(acyl-carrier-protein) reductase, putative K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4930 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4935 M1_5384; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0849 scd; short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0077 fabZ1; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PPM_4604 fabZ3; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PPM_0072 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PPM_1661 M1_1918; putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PPM_3737 M1_4127; putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PPM_0073 fecS; feruloyl-CoA synthetase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ppo00071]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_0073 fecS; feruloyl-CoA synthetase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PPM_0308 adhA; alcohol dehydrogenase I K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_2358 adh3; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_3514 M1_3883; NADPH-ferrihemoprotein reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:ppo00074]
D PPM_0717 acpS; holo-[acyl-carrier-protein] synthase Holo-ACP synthase; 4'-phosphopantetheinyl transferase acpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PPM_1848 acpA; acyl carrier protein ACP K02078 acpP; acyl carrier protein
D PPM_1846 fabD3; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_0913 fabD1; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_2386 fabD5; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ppo00561]
D PPM_4978 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_0947 adhC1; NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PPM_2525 gldA1; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PPM_3239 gldA3; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PPM_3760 gldA5; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D PPM_3917 glpK1; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PPM_4775 glpK5; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PPM_4162 glpK3; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PPM_1844 plsX; fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PPM_2956 M1_3299; UPF0078 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PPM_2959 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PPM_0837 yerQ; lipid kinase yegS K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PPM_1330 ypfP; hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2448 ugtP3; 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2450 ugtP5; 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_0574 ugtP1; processive diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_1682 yqgS; sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PPM_0958 melA5; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D PPM_0727 melA3; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_0551 melA1; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2298 melA9; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2475 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2208 M1_2499; glycosyl hydrolase family 27 (alpha-galactosidase/melibiase) K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ppo00564]
D PPM_2955 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PPM_4774 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PPM_2956 M1_3299; UPF0078 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PPM_2959 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PPM_0837 yerQ; lipid kinase yegS K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PPM_0347 yqiK; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PPM_1690 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PPM_2922 M1_3263; phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D PPM_1923 cdsA1; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PPM_4970 cdsA3; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PPM_4481 pssA3; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PPM_0647 pssA1; CDP-diacylglycerol-serineO-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PPM_4052 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PPM_1960 pgsA; CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PPM_1130 cls1; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PPM_4646 cls3; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PPM_1663 araM; glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D PPM_4491 pcrB; hypothetical protein K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D PPM_0148 yvoF; putative acetyltransferase yvoF K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ppo00600]
D PPM_0899 srfJ3; O-Glycosyl hydrolase family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PPM_0644 srfJ1; O-Glycosyl hydrolase family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PPM_0265 lacZ1; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PPM_0616 M1-797; glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PPM_0958 melA5; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D PPM_0727 melA3; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_0551 melA1; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2298 melA9; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2475 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PPM_2208 M1_2499; glycosyl hydrolase family 27 (alpha-galactosidase/melibiase) K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ppo00230]
D PPM_3004 nudF; adP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PPM_4352 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_0034 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PPM_0793 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PPM_0797 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PPM_0795 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PPM_2850 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PPM_0792 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PPM_0790 purS; phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PPM_0791 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PPM_0794 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PPM_0786 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PPM_0785 purE; phosphoribosylaminoimidazole carboxylase I K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PPM_0789 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PPM_0787 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PPM_0796 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PPM_3851 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PPM_1533 yunD; hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PPM_1052 sasH; hypothetical protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PPM_2998 deoD1; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PPM_4351 deoD3; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PPM_1241 M1_1467; protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PPM_3345 ylmD; UPF0124 protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PPM_0053 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PPM_0080 guaB; inosine monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PPM_2935 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PPM_3957 Nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PPM_1735 xpt1; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PPM_4913 xpt3; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PPM_0772 guaA3; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PPM_3135 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PPM_0477 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PPM_1773 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PPM_0476 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PPM_1772 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PPM_4732 nrdD; ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PPM_1081 dgtH; deoxyguanosinetriphosphatetriphosphohydrolase, putative K01129 dgt; dGTPase [EC:3.1.5.1]
D PPM_0864 dgk; deoxyguanosine kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D PPM_3848 relA5; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PPM_4090 ppx; Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PPM_0546 relA1; hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PPM_1726 relA3; hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PPM_4063 ywaC; GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PPM_5039 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PPM_0865 dck; deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PPM_1787 adeC1; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D PPM_4744 adeC3; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D PPM_0430 cpdB1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PPM_4338 cpdB3; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PPM_1965 ymdB; uncharacterized protein ymdB K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PPM_4433 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PPM_2501 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D PPM_4420 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ppo00240]
D PPM_3330 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PPM_3331 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PPM_3333 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PPM_3332 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PPM_4925 pyrD3; dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PPM_4926 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PPM_1725 pyrD1; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PPM_3328 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PPM_3329 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PPM_1920 smbA; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PPM_2935 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PPM_3888 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PPM_0130 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PPM_2960 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PPM_0271 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PPM_1533 yunD; hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PPM_1052 sasH; hypothetical protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PPM_1241 M1_1467; protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D PPM_4626 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PPM_3334 pyrR; uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PPM_0430 cpdB1; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PPM_4338 cpdB3; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PPM_1965 ymdB; uncharacterized protein ymdB K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D PPM_4350 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D PPM_4354 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PPM_4732 nrdD; ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PPM_0477 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PPM_1773 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PPM_0476 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PPM_1772 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PPM_0865 dck; deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PPM_3448 comEB; Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PPM_0013 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PPM_1941 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PPM_3012 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PPM_2594 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppo00250]
D PPM_0055 nadB1; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PPM_2700 nadB3; putative succinate dehydrogenase [ubiquinone] flavoprotein subunit K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PPM_0781 ansB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PPM_4898 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PPM_0214 asnH; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PPM_1134 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PPM_3956 asnO; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PPM_2876 niT2; nitrilase-like protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PPM_0993 ald; alanine dehydrogenase (stage V sporulation protein N) K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PPM_2867 aspA1; aspartate ammonia-lyase, putative K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PPM_3516 aspA3; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PPM_4545 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PPM_4544 argH3; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PPM_5039 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PPM_0787 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PPM_3333 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PPM_p0044 shmt1; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PPM_1088 gltA; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PPM_2592 gltB; glutamate synthase (small subunit) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PPM_3663 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PPM_1391 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_2801 glnA3; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_3330 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PPM_3331 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PPM_2509 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PPM_0791 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PPM_4407 glmS; glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PPM_0793 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ppo00260]
D PPM_1945 dapG; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_3046 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_1944 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PPM_3872 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PPM_3871 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PPM_0857 hsk; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D PPM_3664 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PPM_4380 ltaE; putative threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PPM_4630 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PPM_4978 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PPM_0105 gpmA1; phosphoglycerate mutase family protein,putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4994 pgm3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4820 gpmA3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_0173 pgm1; phosphoglyceratemutase,2, 3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PPM_2969 serA3; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PPM_1392 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PPM_2691 ysaA; haloacid dehalogenase-like hydrolase domain-containing protein 3 K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
D PPM_3793 yqhJ; glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PPM_3794 yqhK; putative glycine dehydrogenase subunit 2, glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PPM_3792 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3791 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PPM_4481 pssA3; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PPM_0647 pssA1; CDP-diacylglycerol-serineO-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PPM_2116 yrhB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D PPM_0387 sdhA1; L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PPM_0388 sdhB1; L-serine dehydratase, iron-sulfur-dependent,beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PPM_0817 ilvA; threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PPM_2925 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PPM_2926 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PPM_2269 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PPM_3682 sidD; decarboxylase, pyridoxal-dependent K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:ppo00270]
D PPM_4476 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PPM_0879 cysK3; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PPM_0060 cysK1; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PPM_3227 cysK5; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PPM_2116 yrhB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D PPM_1377 metC3; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PPM_2115 cysM; O-acetylserine lyase K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D PPM_4919 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D PPM_2689 metH; putative methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PPM_3138 yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D PPM_4734 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PPM_4590 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PPM_1278 speD1; s-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PPM_3903 speD3; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PPM_2212 M1_2503; spermidine synthase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D PPM_0114 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PPM_3166 pfs; 5'-methylthioadenosine/S-adenosylhomocysteinenuclosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PPM_1512 mtnK; 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D PPM_3345 ylmD; UPF0124 protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PPM_2897 ssnA; chlorohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D PPM_1511 iF2B; translation initiation factor, putative, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D PPM_2883 ykrY; bifunctional enzyme mtnB/mtnX K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D PPM_2881 ykrW; ribulose bisphosphate carboxylase, putative K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D PPM_2882 ykrX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase HK-MTPenyl-1-P phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D PPM_2690 ykrZ; acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D PPM_2877 ykrV1; aminotransferase, classes I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D PPM_3640 ykrV3; aminotransferase, classes I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D PPM_0690 yebR; UPF0067 protein yebR K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PPM_p0197 nlaX; cytosine-specific methyltransferase NlaX K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0201 scrFIA; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0169 dcm1; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_3366 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PPM_0547 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PPM_1945 dapG; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_3046 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_1944 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PPM_3872 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PPM_3871 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PPM_1375 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PPM_1376 metC1; cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PPM_0505 cysD; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PPM_3869 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PPM_3528 TST; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PPM_0453 ldh1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2535 ldh3; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_1576 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PPM_0387 sdhA1; L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PPM_0388 sdhB1; L-serine dehydratase, iron-sulfur-dependent,beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PPM_2969 serA3; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PPM_1392 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ppo00280]
D PPM_3869 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PPM_3009 bckE1; 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PPM_3008 dxpS; branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PPM_3007 bkdB; dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_1242 hopR; 2-hydroxy-3-oxopropionate reductase, putative K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppo00290]
D PPM_0817 ilvA; threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PPM_2861 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PPM_2860 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PPM_1346 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PPM_0075 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1342 ilvB3; acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_2052 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1343 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PPM_1344 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PPM_3812 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PPM_3869 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PPM_1345 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PPM_1721 leuA3; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D PPM_2518 leuA5; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ppo00300]
D PPM_3872 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PPM_1945 dapG; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_3046 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_1944 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PPM_1946 dapA3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PPM_2335 dapA5; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PPM_2406 dapA7; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PPM_2909 dapB3; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PPM_4547 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PPM_3140 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PPM_3987 lysA3; Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PPM_2988 lysA1; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PPM_3525 glmU; putative tetrahydrodipicolinate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D PPM_3519 patA; aminotransferase, classes I and II K00841 patA; aminotransferase [EC:2.6.1.-]
D PPM_3524 adpd; putative N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D PPM_1398 avtA; valine-pyruvate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PPM_3389 M1_3754; aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PPM_3360 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PPM_3359 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ppo00310]
D PPM_1322 odhB; 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_1144 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D PPM_1143 atoA; butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ppo00220]
D PPM_4546 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PPM_4545 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PPM_4544 argH3; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PPM_3951 M1_4349; arginase K01476 rocF; arginase [EC:3.5.3.1]
D PPM_4742 nos; nitric-oxide synthase, bacterial K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D PPM_2509 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PPM_0791 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PPM_1391 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_2801 glnA3; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_3330 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PPM_3331 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PPM_3663 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PPM_3437 argH1; acetyltransferase, GNAT family K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D PPM_4549 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PPM_3961 M1_4359; Acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D PPM_4548 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PPM_4550 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PPM_4547 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ppo00330]
D PPM_3180 cad; lysine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PPM_2223 M1_2516; Agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D PPM_2224 M1_2517; putative carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PPM_1652 lyS2; hypothetical protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D PPM_1653 nspC; ornithine decarboxylase ODC K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D PPM_2212 M1_2503; spermidine synthase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D PPM_0114 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D PPM_1278 speD1; s-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PPM_3903 speD3; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_4512 M1_4944; diamine N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D PPM_2340 gat; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_1488 gatA1; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_4742 nos; nitric-oxide synthase, bacterial K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D PPM_3951 M1_4349; arginase K01476 rocF; arginase [EC:3.5.3.1]
D PPM_2880 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PPM_2878 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PPM_2879 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PPM_2296 yclE; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:ppo00340]
D PPM_0151 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PPM_0150 hisZ; histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D PPM_0157 hisI; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PPM_0155 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PPM_0154 hisH; amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PPM_0156 hisF; imidazoleglycerol-phosphate synthase cyclase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PPM_0153 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PPM_2924 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PPM_0158 hisJ1; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D PPM_4062 hisJ3; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D PPM_0152 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ppo00350]
D PPM_2924 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PPM_0308 adhA; alcohol dehydrogenase I K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_2358 adh3; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_1691 M1_1951; fumarylacetoacetate hydrolase domain-containing protein 1 K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:ppo00360]
D PPM_2892 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PPM_2924 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PPM_2340 gat; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_1488 gatA1; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:ppo00380]
D PPM_1322 odhB; 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_3514 M1_3883; NADPH-ferrihemoprotein reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D PPM_2340 gat; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_1488 gatA1; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_2500 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppo00400]
D PPM_1390 ccmA1; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PPM_1009 aroA1; phospho-2-dehydro-3-deoxyheptonate aldolase / chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D PPM_2932 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PPM_0873 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D PPM_3459 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PPM_0874 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PPM_3174 aroA3; 3-phosphoshikimate-1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PPM_2933 aroF; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PPM_2930 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PPM_2929 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PPM_3189 M1_3546; glycosyl transferase, family 3 K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PPM_2927 trpF; N-(5'-phosphoribosyl)anthranilate isomerase PRAI K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PPM_2928 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PPM_2925 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PPM_2926 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PPM_2931 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D PPM_3873 pheB; chorismate mutase K06209 pheB; chorismate mutase [EC:5.4.99.5]
D PPM_2923 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PPM_3870 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PPM_2924 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ppo00410]
D PPM_2901 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PPM_p0044 shmt1; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_2902 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ppo00430]
D PPM_p0044 shmt1; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PPM_0993 ald; alanine dehydrogenase (stage V sporulation protein N) K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PPM_1969 2242; hypothetical protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D PPM_2891 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ppo00440]
D PPM_0474 phnX; phosphonoacetaldehyde phosphonohydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D PPM_1248 phnP; Octanoyltransferase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ppo00450]
D PPM_1376 metC1; cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PPM_1377 metC3; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PPM_2689 metH; putative methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PPM_3138 yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D PPM_4734 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PPM_1516 csd; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PPM_0160 trxB1; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PPM_4275 trxB7; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PPM_2033 M1_2315; reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PPM_4420 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PPM_3058 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ppo00460]
D PPM_0334 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_0898 bglB; beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_1040 bglC1; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_4730 M1_5171; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_3914 bglA7; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_4291 bgl; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_0781 ansB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PPM_4898 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PPM_4630 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ppo00470]
D PPM_1196 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PPM_0746 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_2322 ddlB; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_2509 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PPM_0791 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PPM_1676 murI1; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PPM_2045 murI3; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PPM_2397 murI5; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PPM_3357 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PPM_3140 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PPM_3987 lysA3; Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PPM_2988 lysA1; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ppo00480]
D PPM_1575 citC; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PPM_2037 gnd1; 6-phosphogluconate dehydrogenase family protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PPM_3176 gnd3; 6-phosphogluconatedehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PPM_2036 zwf1; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PPM_4184 zwf3; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PPM_1208 bsaA1; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PPM_2854 bsaA3; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PPM_4668 bsaA5; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PPM_4933 gpo; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PPM_2212 M1_2503; spermidine synthase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D PPM_0114 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ppo00511]
D PPM_0265 lacZ1; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PPM_0616 M1-797; glycoside hydrolase family 2 sugar binding protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PPM_1780 bmnA; beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D PPM_4292 M1_4711; Alpha-L-fucosidase 2 K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D PPM_0899 srfJ3; O-Glycosyl hydrolase family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PPM_0644 srfJ1; O-Glycosyl hydrolase family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ppo00542]
D PPM_4598 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppo00541]
D PPM_0349 yngB; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_1093 gtaB1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4510 gtaB3; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PPM_4026 galE3; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_4503 galE5; NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_3803 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PPM_1104 ugdH; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_1122 tuaD; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PPM_4042 rfbA1; glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4499 rfbA3; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4497 spsJ; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PPM_4565 rfbC3; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PPM_4498 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PPM_4032 wcgU; putative reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PPM_4496 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PPM_4568 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PPM_4567 ddhB; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PPM_1325 manA1; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PPM_2201 manC3; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_3935 manC5; mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_1106 manC1; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PPM_1115 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PPM_1114 wcaG; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PPM_0033 gcaD; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PPM_4034 capG; capsular polysaccharide synthesis enzyme Cap5G K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PPM_4625 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PPM_4033 capD; putative UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PPM_3970 wecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:ppo00550]
D PPM_0134 murZ; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_3353 murA3; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_4612 murA5; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_3354 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PPM_3891 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PPM_3357 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PPM_3360 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PPM_0746 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_2322 ddlB; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_3359 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PPM_3400 dgkA; diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D PPM_1922 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PPM_4310 bacA3; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2451 M1_2764; uncharacterized protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_1331 pgpB1; PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2194 pgpB3; lipid phosphate phosphohydrolase 3 K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2195 bcrC; uncharacterized protein ywoA K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_3358 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PPM_0520 murG1; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PPM_3355 murG3; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PPM_2808 pbpF; penicillin-binding protein 1 K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PPM_0113 pbpG; penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D PPM_3362 pbpB; Stage V sporulation protein D Sporulation-specific penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D PPM_3361 spoVD; Stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D PPM_4120 pbp3; Penicillin-binding protein 2 PBP-2 K21465 pbpA; penicillin-binding protein A
D PPM_0081 dacA1; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_2995 dacF; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_5047 dacA3; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_2975 dacB; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_0534 yodJ; D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PPM_3163 pdpF3; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_3086 pdpF1; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
C 00552 Teichoic acid biosynthesis [PATH:ppo00552]
D PPM_4310 bacA3; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2451 M1_2764; uncharacterized protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_1331 pgpB1; PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2194 pgpB3; lipid phosphate phosphohydrolase 3 K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2195 bcrC; uncharacterized protein ywoA K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_4598 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PPM_1097 tagA1; UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PPM_1121 wecG; UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PPM_4599 tagA3; N-acetylglucosaminyldiphosphoundecaprenol K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PPM_3376 lytR5; Membrane-bound protein lytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PPM_5046 lytR9; Membrane-bound protein LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PPM_4672 lytR7; Membrane-bound protein lytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PPM_1123 lytR3; membrane-bound protein lytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PPM_0761 lytR1; membrane-bound protein lytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PPM_1330 ypfP; hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2448 ugtP3; 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2450 ugtP5; 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_0574 ugtP1; processive diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_1682 yqgS; sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D PPM_4598 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:ppo00543]
D PPM_4598 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PPM_4476 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ppo00730]
D PPM_0741 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PPM_3948 thiD1; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PPM_3501 moeB3; Molybdenum cofactor synthesis protein 3 K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D PPM_2188 nifS; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3829 yrvO; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3382 nifZ; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3381 thiI3; putative thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PPM_2869 thiH; thiazole biosynthesis protein thiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PPM_2607 goxB; glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D PPM_3027 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PPM_2605 thiG1; thiazole biosynthesis protein thiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PPM_2608 tenI; regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D PPM_3947 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PPM_3949 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PPM_1987 yloQ1; conserved hypothetical protein TIGR00157 K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PPM_3125 yloQ3; putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PPM_1284 phoB1; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2871 phoB3; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2601 tpk1; thiamin pyrophosphokinase 1 Thiamine pyrophosphokinase 1; mTPK1 K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PPM_4433 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PPM_3946 tenA; Phosphomethylpyrimidine kinase THI21 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:ppo00740]
D PPM_4362 ribA3; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PPM_2982 ribA1; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PPM_4361 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PPM_4118 ycsE; putative protein ycsE K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D PPM_2981 ribH; riboflavin synthase, beta subunit K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PPM_2983 ribB; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PPM_1936 ribC; riboflavin biosynthesis protein RibC K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PPM_2088 ssuE; putative NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D PPM_0422 nfrA; NAD(P)H-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D PPM_3947 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PPM_3004 nudF; adP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PPM_2938 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_0382 yclB; ubiX related subunit of putative (de) carboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ppo00750]
D PPM_4336 thiD3; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PPM_1392 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PPM_3664 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PPM_0082 yaaD; pyridoxal biosynthesis lyase pdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PPM_0083 guaA1; glutamine amidotransferase, SNO family K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ppo00760]
D PPM_0055 nadB1; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PPM_2700 nadB3; putative succinate dehydrogenase [ubiquinone] flavoprotein subunit K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PPM_2189 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PPM_0056 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PPM_1975 pncB; nicotinate phosphoribosyltransferase, putative K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PPM_2998 deoD1; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PPM_4351 deoD3; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PPM_1533 yunD; hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PPM_1052 sasH; hypothetical protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PPM_3457 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PPM_0715 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PPM_3807 M1_4201; putative regulatory protein SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PPM_4139 ppnK; inorganic polyphosphate/ATP-NAD kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ppo00770]
D PPM_0075 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1342 ilvB3; acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_2052 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PPM_1343 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PPM_1344 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PPM_3812 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PPM_2903 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PPM_0652 ykpB; 2-dehydropantoate 2-reductase, putative K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PPM_2418 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PPM_3372 panE; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PPM_2902 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PPM_0057 panK; type III pantothenate kinase Pantothenic acid kinase; PanK-III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PPM_3133 dfp; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PPM_1837 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PPM_1587 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PPM_0717 acpS; holo-[acyl-carrier-protein] synthase Holo-ACP synthase; 4'-phosphopantetheinyl transferase acpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PPM_1432 sfp1; hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PPM_3224 sfp3; hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PPM_3869 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PPM_2901 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ppo00780]
D PPM_1849 fabF3; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_0076 fabF1; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_1748 fabFB; [acyl-carrier protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_1847 fabG5; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_1954 fabG7; [acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2312 M1_2611; [acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2558 fabG1; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4107 fabG11; 3-oxoacyl-(acyl-carrier-protein) reductase, putative K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4930 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4935 M1_5384; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0849 scd; short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0077 fabZ1; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PPM_4604 fabZ3; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PPM_0072 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PPM_2526 bioB1; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PPM_2870 bioB3; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PPM_2904 birA; birA-like protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ppo00785]
D PPM_3006 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PPM_4141 lipA3; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PPM_0737 ywfL; lipoate-protein ligase A Lipoate-protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D PPM_1252 yhfJ; lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2598 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PPM_2597 pdhB; pyruvate dehydrogenase complex E1 component,beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PPM_2596 pdhC; dihydrolipoamide S-acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PPM_1321 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PPM_1322 odhB; 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PPM_3009 bckE1; 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PPM_3008 dxpS; branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PPM_3007 bkdB; dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PPM_3793 yqhJ; glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PPM_3794 yqhK; putative glycine dehydrogenase subunit 2, glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PPM_3792 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PPM_3791 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ppo00790]
D PPM_0736 mtrA; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PPM_2353 yciA1; putative cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D PPM_1284 phoB1; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2871 phoB3; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_0065 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PPM_0066 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PPM_0064 sul; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PPM_2593 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PPM_3892 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PPM_4362 ribA3; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PPM_2982 ribA1; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PPM_0062 pabA; para-aminobenzoate synthase glutamine amidotransferase, component II K25575 pabA; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component II [EC:2.6.1.123]
D PPM_0061 pabB; para-aminobenzoate synthase, component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D PPM_0063 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PPM_1045 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase,putative K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PPM_0096 dcoH; putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PPM_0186 queE1; ribosomal RNA large subunit methyltransferase N K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PPM_1044 queE3; ribosomal RNA large subunit methyltransferase N K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PPM_0187 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PPM_1046 thiI1; queuosine biosynthesis protein queC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PPM_1043 folE; GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PPM_3613 moaA3; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PPM_3505 moaA1; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PPM_1154 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PPM_3615 moaE3; Molybdopterin-converting factor subunit 2 Molybdopterin synthase subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PPM_3502 moaE1; Molybdenum cofactor synthesis protein 2 large subunit MPT synthase large subunit K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D PPM_1155 moaB; molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PPM_1976 mobB1; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PPM_2566 moeA; molybdopterin biosynthesis protein moeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PPM_4656 mobA; putative molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ppo00670]
D PPM_2593 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PPM_1191 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PPM_0860 folD1; methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PPM_3031 folD3; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PPM_0859 ftcd; formiminotetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D PPM_4630 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PPM_0795 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PPM_0796 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PPM_3792 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PPM_2689 metH; putative methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PPM_3138 yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D PPM_2594 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PPM_1239 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PPM_1153 yqgN; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PPM_4919 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D PPM_4590 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PPM_3366 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PPM_3793 yqhJ; glycine cleavage system P-protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PPM_3794 yqhK; putative glycine dehydrogenase subunit 2, glycine cleavage system P-protein subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3791 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PPM_2116 yrhB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ppo00860]
D PPM_2020 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PPM_3902 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PPM_0760 gsaB; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PPM_3896 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PPM_3897 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PPM_3899 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PPM_4711 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PPM_1686 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PPM_2828 hemN1; putative coproporphyrinogen III oxidase and related FeS oxidoreductase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PPM_1688 hemY1; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PPM_3628 hemY3; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PPM_1687 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PPM_4082 ywfI; UPF0447 protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D PPM_3898 hemX; uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D PPM_3900 M1_4295; Siroheme synthase 2 K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D PPM_3629 M1_4008; Coenzyme PQQ synthesis protein E K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PPM_4125 cyoE; protohaem IX farnesyltransferase (haem O biosynthesis) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PPM_4113 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PPM_4708 cbiX; sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PPM_4703 cbiL; precorrin-2 C20-methyltransferase / cobalt-factor-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PPM_4709 cbiH; precorrin-3B C17-methyltransferase K21479 cbiH60; cobalt-factor III methyltransferase [EC:2.1.1.272]
D PPM_4702 cbiF; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PPM_4701 cbiG; Protein cbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D PPM_4707 cbiJ; precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PPM_4705 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PPM_4704 cobL; precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PPM_4706 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PPM_4700 cbiA; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PPM_1368 MMAB; cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PPM_1262 cbiP; putative cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PPM_1254 cbiB; synthesis of vitamin B12 adenosyl cobalamide precursor K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PPM_1260 cobU; adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PPM_1261 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PPM_1259 cobT; nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PPM_1255 cobC; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D PPM_1253 cobD; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D PPM_4254 isdG; Heme-degrading monooxygenase IsdG K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
D PPM_2435 gusB; beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppo00130]
D PPM_2939 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PPM_2938 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_0382 yclB; ubiX related subunit of putative (de) carboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_2940 menG; 2-heptaprenyl-1,4-naphthoquinonemethyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PPM_2937 M1_3279; hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D PPM_4103 M1_4511; FO synthase subunit 2 2 K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D PPM_4092 M1_4500; 5'-methylthioadenosine/S-adenosylhomocysteinenucleosidase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D PPM_1378 foS2; FO synthase subunit 2 1 K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D PPM_4093 M1_4501; hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D PPM_0683 M1-870; NAD(P)H dehydrogenase, quinone family K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PPM_1825 M1_2093; NAD(P)H dehydrogenase, quinone family K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PPM_4369 ycaK3; NAD(P)H oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PPM_3725 M1_4115; FMN-dependent NADH-azoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PPM_4278 wrbA; Flavoprotein wrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PPM_0273 nmrA; uncharacterized oxidoreductase yesF K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PPM_4967 M1_5418; hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ppo00900]
D PPM_3027 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PPM_1924 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PPM_4479 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PPM_0030 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PPM_4478 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PPM_3908 gcpE; gcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PPM_1389 lytB; penicillin tolerance protein LytB K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_2938 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_0382 yclB; ubiX related subunit of putative (de) carboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_4641 M1_5077; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PPM_3028 crtE; polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PPM_2941 hepS; heptaprenyl diphosphate synthase component 1 HEPPP synthase subunit 1; Spore germination protein C1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D PPM_2936 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D PPM_1922 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PPM_1240 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_4160 M1_4571; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PPM_4161 M1_4572; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D PPM_0588 M1-763; beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ppo00523]
D PPM_4042 rfbA1; glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4499 rfbA3; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4497 spsJ; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PPM_4565 rfbC3; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PPM_4498 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PPM_4032 wcgU; putative reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PPM_4496 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PPM_3988 gfo1; Inositol 2-dehydrogenase K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D PPM_4497 spsJ; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ppo00946]
D PPM_0334 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_0898 bglB; beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_1040 bglC1; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_4730 M1_5171; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_3914 bglA7; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_4291 bgl; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_3594 ramA; alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PPM_4801 cah5; cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D PPM_3754 cah3; cephalosporin C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:ppo00332]
D PPM_2878 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PPM_2879 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ppo00261]
D PPM_4420 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D PPM_1945 dapG; aspartate kinase I K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_3046 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PPM_1944 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PPM_1946 dapA3; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PPM_2335 dapA5; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PPM_2406 dapA7; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PPM_2909 dapB3; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ppo00521]
D PPM_0369 glcK3; putative sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0161 glcK1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_4603 manB1; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PPM_0749 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PPM_4042 rfbA1; glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4499 rfbA3; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4497 spsJ; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PPM_4565 rfbC3; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PPM_4498 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PPM_4032 wcgU; putative reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PPM_4496 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PPM_0369 glcK3; putative sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D PPM_0161 glcK1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ppo00525]
D PPM_4042 rfbA1; glucose-1-phosphate thymidylyltransferase, putative K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4499 rfbA3; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PPM_4497 spsJ; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ppo00401]
D PPM_2923 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PPM_2924 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PPM_2930 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PPM_1846 fabD3; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_0913 fabD1; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_2386 fabD5; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_1847 fabG5; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_1954 fabG7; [acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2312 M1_2611; [acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2558 fabG1; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4107 fabG11; 3-oxoacyl-(acyl-carrier-protein) reductase, putative K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4930 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4935 M1_5384; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0849 scd; short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0072 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:ppo00998]
D PPM_0954 yhjK; putative hydrolases of the HAD superfamily K18654 ntdB; kanosamine-6-phosphate phosphatase [EC:3.1.3.92]
D PPM_1848 acpA; acyl carrier protein ACP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppo00999]
D PPM_4590 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PPM_3459 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D PPM_0334 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_0898 bglB; beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_1040 bglC1; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_4730 M1_5171; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PPM_3914 bglA7; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PPM_4291 bgl; beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ppo00362]
D PPM_2510 yfiE; uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D PPM_1608 yphJ; 4-carboxymuconolactone decarboxylase CMD K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PPM_3091 cmD; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PPM_3104 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PPM_2950 peTF; ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PPM_2892 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ppo00627]
D PPM_2340 gat; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_1488 gatA1; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_4112 M1_4520; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61]
D PPM_0383 yclC; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Polyprenyl p-hydroxybenzoate decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D PPM_2938 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_0382 yclB; ubiX related subunit of putative (de) carboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D PPM_3740 M1_4130; hypothetical protein K22960 lpdD; gallate decarboxylase subunit D
D PPM_1144 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D PPM_1143 atoA; butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PPM_3514 M1_3883; NADPH-ferrihemoprotein reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ppo00625]
D PPM_0308 adhA; alcohol dehydrogenase I K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_2358 adh3; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PPM_0074 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D PPM_0484 yfnB; 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D PPM_2297 yjjG; hydrolase, haloacid dehalogenase-like family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ppo00361]
D PPM_2510 yfiE; uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D PPM_0484 yfnB; 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D PPM_2297 yjjG; hydrolase, haloacid dehalogenase-like family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:ppo00622]
D PPM_2510 yfiE; uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
D PPM_2985 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D PPM_2986 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:ppo00643]
D PPM_2340 gat; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_1488 gatA1; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PPM_2510 yfiE; uncharacterized protein yfiE K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:ppo00626]
D PPM_0308 adhA; alcohol dehydrogenase I K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_2358 adh3; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PPM_4947 adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D PPM_3064 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ppo03020]
D PPM_4462 rpoB3; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PPM_4461 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PPM_4426 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PPM_3134 yloH; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PPM_0128 rpoE1; replicase polyprotein 1ab K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors [PATH:ppo03022]
D PPM_3149 xpB; tFIIH basal transcription factor complex helicase XPB subunit DNA excision repair protein ERCC-3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PPM_4768 uvrB3; DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ppo03010]
D PPM_2958 rpsA; 30S ribosomal S1-like protein K02945 RP-S1; small subunit ribosomal protein S1
D PPM_p0182 rpsA; small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PPM_1918 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PPM_4448 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PPM_3160 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PPM_4437 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PPM_5055 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PPM_4458 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PPM_4440 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PPM_4422 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PPM_4455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PPM_4427 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PPM_4459 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PPM_4428 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PPM_2351 rpsN1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PPM_4441 rpsN3; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D PPM_1937 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PPM_1856 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PPM_4445 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PPM_5053 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PPM_4450 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PPM_3443 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PPM_3411 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PPM_4466 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PPM_4451 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PPM_4454 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PPM_4453 rplD; 50S ribosomal protein L4 BL4 K02926 RP-L4; large subunit ribosomal protein L4
D PPM_4442 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PPM_4439 rplF; 50S ribosomal protein L6 BL10 K02933 RP-L6; large subunit ribosomal protein L6
D PPM_2219 M1_2510; hypothetical protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D PPM_4464 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PPM_5041 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PPM_4465 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PPM_4467 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PPM_4423 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PPM_4444 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PPM_4435 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PPM_4447 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PPM_4425 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PPM_4438 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PPM_1860 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PPM_1335 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PPM_3878 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PPM_4449 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PPM_4452 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PPM_4443 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PPM_3783 ctc; 50S ribosomal protein L25 General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D PPM_3876 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PPM_3122 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PPM_4446 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PPM_4436 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PPM_0137 rpmE1; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PPM_2130 rpmE3; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PPM_1842 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PPM_2129 rpmG1; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PPM_4470 rpmG3; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PPM_5071 rpmH; 39S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PPM_1334 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PPM_4429 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PPM_4460 ybxF; 50S ribosomal protein L7Ae K07590 RP-L7A; large subunit ribosomal protein L7A
D PPM_4431 hypothetical protein K02875 RP-L14e; large subunit ribosomal protein L14e
D PPM_r042 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r028 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r039 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r035 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r032 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r034 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r041 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppo00970]
D PPM_t060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t109 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t107 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t047 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t098 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t079 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t015 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t106 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t095 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t078 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t008 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t073 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t030 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PPM_t082 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PPM_t026 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t102 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t084 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t037 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t054 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t093 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t104 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t076 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t096 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t099 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t071 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t083 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t025 tRNA-His K14226 tRNA-His; tRNA His
D PPM_t085 tRNA-His K14226 tRNA-His; tRNA His
D PPM_t002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PPM_t013 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PPM_t108 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PPM_t048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t063 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t062 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t081 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t069 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t011 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t044 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t055 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t101 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t072 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t067 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t066 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t005 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t016 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t020 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t039 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t074 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t091 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t009 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PPM_t022 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PPM_t089 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PPM_t032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t058 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t068 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t077 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t094 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t041 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t051 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t088 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t105 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t086 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PPM_t010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t024 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t042 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t087 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t064 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t006 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t038 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t019 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t075 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t092 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t103 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_2020 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PPM_4477 gltX3; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PPM_4210 gatA5; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PPM_3488 gatA3; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PPM_4209 gatB; glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PPM_4211 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Asp/Glu-ADT subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PPM_4658 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PPM_3824 alaS1; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PPM_4368 alaS3; alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PPM_3211 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_3843 aspS3; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_2890 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PPM_3397 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PPM_3396 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PPM_0545 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PPM_0084 serS1; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PPM_4879 serS3; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PPM_4475 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PPM_3058 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PPM_3130 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PPM_3893 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PPM_3451 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PPM_3339 ILS1; isoleucine-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PPM_0069 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PPM_0120 argS1; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_1977 argS3; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_1926 proS1; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PPM_2211 proS3; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PPM_3844 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PPM_1353 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PPM_1354 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PPM_3162 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PPM_4129 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ppo03060]
D PPM_4434 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PPM_4469 secE; putative preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D PPM_0175 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D PPM_3855 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D PPM_3854 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D PPM_3860 yajC; UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC
D PPM_2192 yqjG; inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_5069 oxaA; Inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_1454 secA1; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_4554 secA3; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_1855 ffH; signal recognition particle 54 kDa protein 2 SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PPM_1852 ftsY; signal recognition particle 54 kDa protein 2 K03110 ftsY; fused signal recognition particle receptor
D PPM_1156 tatB; tatB-like, Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D PPM_1157 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D PPM_0732 sipS1; signal peptidase I T SPase I; Leader peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PPM_1861 sipS3; signal peptidase I S K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PPM_4871 sipM; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PPM_3336 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ppo04122]
D PPM_2188 nifS; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3829 yrvO; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3382 nifZ; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3528 TST; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PPM_3831 trmU; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PPM_3615 moaE3; Molybdopterin-converting factor subunit 2 Molybdopterin synthase subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PPM_3613 moaA3; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PPM_3505 moaA1; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PPM_3503 M1_3872; Molybdenum cofactor synthesis protein 2 small subunit K03636 moaD; sulfur-carrier protein
D PPM_3614 moaD; molybdopterin converting factor subunit 1 MoaD K03636 moaD; sulfur-carrier protein
D PPM_3502 moaE1; Molybdenum cofactor synthesis protein 2 large subunit MPT synthase large subunit K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D PPM_3616 moeB5; Molybdenum cofactor synthesis protein 3 K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D PPM_1154 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PPM_1155 moaB; molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PPM_1976 mobB1; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D PPM_3381 thiI3; putative thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PPM_2606 thiG3; thiazole biosynthesis protein ThiG K03154 thiS; sulfur carrier protein
D PPM_3501 moeB3; Molybdenum cofactor synthesis protein 3 K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ppo03018]
D PPM_0174 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PPM_1938 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PPM_0176 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PPM_1709 deaD1; DEAD-box ATP-dependent RNA helicase ydbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4674 deaD3; putative ATP-dependent RNA helicase DDX17 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4990 deaD5; DEAD-box ATP dependent DNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4058 M1_4464; DEAD-box ATP-dependent RNA helicase 42 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_1282 recQ; ATP-dependent DNA helicase-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PPM_0135 rho; transcription termination factor rho ATP-dependent helicase rho K03628 rho; transcription termination factor Rho
D PPM_1964 cnpD4; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PPM_1947 ykqC; ribonuclease J 1 RNase J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PPM_0711 M1-898; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_3433 dnaK; Chaperone protein dnaK Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D PPM_1159 groEL; 60 kDa chaperonin Protein Cpn60; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PPM_2809 hfq; protein hfq K03666 hfq; host factor-I protein
D PPM_4091 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ppo03030]
D PPM_1719 polC1; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PPM_1559 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PPM_1927 polC3; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PPM_0138 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PPM_0016 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PPM_3444 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PPM_0002 dnaN1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_2789 dnaN3; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_p0204 pcnA; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_2662 dnaB1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PPM_3310 dnaB3; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PPM_5040 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PPM_3394 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PPM_5054 ssb; Single-stranded DNA-binding protein SSB K03111 ssb; single-strand DNA-binding protein
D PPM_p0185 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PPM_0733 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PPM_1863 rnh; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PPM_1584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PPM_4489 ligA3; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ppo03410]
D PPM_2856 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PPM_3209 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PPM_0718 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PPM_1585 mutM1; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PPM_2686 mutM3; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PPM_4151 alkA; putative DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PPM_0992 ygjF; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D PPM_5010 M1_5464; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PPM_3913 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PPM_1238 nfo1; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PPM_2685 nfo3; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PPM_1584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PPM_3852 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PPM_4489 ligA3; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ppo03420]
D PPM_0038 mfd; transcription-repair-coupling factor TRCF; ATP-dependent helicase mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PPM_4517 uvrA; UvrABC system protein A UvrA protein K03701 uvrA; excinuclease ABC subunit A
D PPM_4518 uvrB1; UvrABC system protein B Protein uvrB K03702 uvrB; excinuclease ABC subunit B
D PPM_4078 uvrC1; UvrABC system protein C Protein uvrC K03703 uvrC; excinuclease ABC subunit C
D PPM_0562 yjcD; ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_1786 yvgS; helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_3839 uvrD; UvrD/Rep helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_4490 pcrA3; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_1584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PPM_4489 ligA3; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PPM_3149 xpB; tFIIH basal transcription factor complex helicase XPB subunit DNA excision repair protein ERCC-3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PPM_4768 uvrB3; DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:ppo03430]
D PPM_2813 mutS3; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D PPM_1357 mutS2; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2
D PPM_2538 mutS1; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2
D PPM_2812 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D PPM_0562 yjcD; ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_1786 yvgS; helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_3839 uvrD; UvrD/Rep helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_4490 pcrA3; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_3030 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PPM_3029 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PPM_3852 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PPM_5054 ssb; Single-stranded DNA-binding protein SSB K03111 ssb; single-strand DNA-binding protein
D PPM_p0185 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PPM_1559 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PPM_1927 polC3; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PPM_0002 dnaN1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_2789 dnaN3; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_p0204 pcnA; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_0138 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PPM_3444 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PPM_0016 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PPM_1719 polC1; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PPM_4489 ligA3; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PPM_p0011 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_3547 M1_3919; hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ppo03440]
D PPM_3852 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PPM_5054 ssb; Single-stranded DNA-binding protein SSB K03111 ssb; single-strand DNA-binding protein
D PPM_p0185 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PPM_0004 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D PPM_3398 recO; DNA repair protein recO Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D PPM_0140 recR; recombination protein recR K06187 recR; recombination protein RecR
D PPM_1962 recA; protein recA Recombinase A K03553 recA; recombination protein RecA
D PPM_1584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PPM_3865 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D PPM_3864 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PPM_2660 ruvC1; crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PPM_3866 ruvC3; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PPM_3119 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PPM_1559 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PPM_1927 polC3; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PPM_0002 dnaN1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_2789 dnaN3; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_p0204 pcnA; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_0138 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PPM_3444 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PPM_0016 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PPM_1719 polC1; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PPM_3132 priA; primosomal protein N' ATP-dependent helicase priA; Replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:ppo03450]
D PPM_1140 ykoV; hypothetical protein K10979 ku; DNA end-binding protein Ku
D PPM_0359 lig; hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PPM_1132 ykoU; hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ppo02010]
D PPM_4346 sbp; Sulfate-binding protein Sulfate starvation-induced protein 2 K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PPM_4345 cysT5; putative sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PPM_4344 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PPM_1247 cysA; sulfate transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PPM_3626 modA3; Molybdate/tungstate-binding protein wtpA K02020 modA; molybdate transport system substrate-binding protein
D PPM_3500 modA1; Molybdate/tungstate-binding protein wtpA K02020 modA; molybdate transport system substrate-binding protein
D PPM_3625 cysT3; putative sulfate transport system permease protein cysT K02018 modB; molybdate transport system permease protein
D PPM_3499 cysT1; putative sulfate transport system permease protein cysT K02018 modB; molybdate transport system permease protein
D PPM_0124 ftpB; ferric transport system permease protein FbpB K02012 afuA; iron(III) transport system substrate-binding protein
D PPM_0125 ftpA; ferric transport system permease protein fbpB K02011 afuB; iron(III) transport system permease protein
D PPM_0123 phnT; ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PPM_3520 potD1; Spermidine/putrescine-binding periplasmic protein 1 SPBP K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PPM_3521 potC1; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein
D PPM_3522 potB; Putrescine transport system permease protein potH K11071 potB; spermidine/putrescine transport system permease protein
D PPM_3523 potA7; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PPM_1178 M1_1402; glycine betaine-binding protein K02001 proW; glycine betaine/proline transport system permease protein
D PPM_1179 proV; glycine betaine/L-proline ABC transporter,ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PPM_0144 msmX; sn-glycerol-3-phosphate import ATP-binding protein ugpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PPM_0663 msmE3; putative binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4795 msmE7; Multiple sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4866 ugpB5; sn-glycerol-3-phosphate-binding periplasmic protein ugpB K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_3715 yurO5; putative ABC transporter extracellular-binding protein yurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_1791 msmE5; multiple sugar-binding protein Flags: Precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_2302 yurO3; uncharacterized ABC transporter extracellular-binding protein yurO Flags: Precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_0376 yurO1; uncharacterized ABC transporter extracellular-binding protein yurO Flags: Precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4805 M1_5249; putative ABC transporter extracellular-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4794 msmF3; sn-glycerol-3-phosphate transport system permease protein ugpA K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_4869 amyD7; putative starch degradation products transport system permease protein amyD K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_3714 ugpA5; sn-glycerol-3-phosphate transport system permease protein UgpA K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_0377 lacF7; putative ABC transporter permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_2303 yurN1; sn-glycerol-3-phosphate transport system permease protein ugpA K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_0664 msmF1; putative ABC transporter permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_4804 yurN3; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_4793 msmG; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_4870 ugpE2; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_3713 yurM7; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_0378 yurM3; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_2304 yurM5; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_0665 amyC3; L-arabinose transport system permease protein araQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_4803 malG; Maltose transport system permease protein MalG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_0268 lacE1; lactose-binding protein LBP; Flags: Precursor K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D PPM_0267 lacF1; lactose transport system permease protein lacF K10189 lacF; lactose/L-arabinose transport system permease protein
D PPM_0266 araQ1; maltose transport system permease protein malG K10190 lacG; lactose/L-arabinose transport system permease protein
D PPM_2457 ytcQ5; lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_3201 ytcQ7; uncharacterized protein in butB 5'region K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_3472 lplA2; Lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_4293 lplA7; sn-glycerol-3-phosphate-binding periplasmic protein ugpB K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_1778 lplA1; lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_0556 lplA3; lipoprotein lplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_2064 ytcQ3; lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_4833 M1_5278; Multiple sugar-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_2440 lplA5; lipoprotein lplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_2456 lplB9; sn-glycerol-3-phosphate transport system permease protein ugpA K17319 lplB; putative aldouronate transport system permease protein
D PPM_3474 ypdA1; sn-glycerol-3-phosphate transport system permease protein ugpA K17319 lplB; putative aldouronate transport system permease protein
D PPM_2062 lplB5; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_2442 lplB7; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_3200 lplB11; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_0554 lplB1; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_4295 lplB15; L-arabinose transport system permease protein araP K17319 lplB; putative aldouronate transport system permease protein
D PPM_4832 lplB17; putative ABC transporter permease protein yurN K17319 lplB; putative aldouronate transport system permease protein
D PPM_2455 lplC9; protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_0555 lplC1; sn-glycerol-3-phosphate transport system permease protein ugpE K17320 lplC; putative aldouronate transport system permease protein
D PPM_4294 lplC11; Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_2063 lplC5; putative ABC transporter permease protein K17320 lplC; putative aldouronate transport system permease protein
D PPM_3199 ytcP1; protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_3473 ypcH; Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_4831 lplC13; Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_2441 lplC7; protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_3920 lacE3; Lactose-binding protein LBP K10240 cebE; cellobiose transport system substrate-binding protein
D PPM_3921 cebF; putative ABC transporter permease protein yurN K10241 cebF; cellobiose transport system permease protein
D PPM_3922 araQ5; sn-glycerol-3-phosphate transport system permease protein ugpE K10242 cebG; cellobiose transport system permease protein
D PPM_0362 srrA1; ABC-type sugar transport system, periplasmic component K17244 chiE; putative chitobiose transport system substrate-binding protein
D PPM_0363 lacF5; putative ABC transporter permease protein K17245 chiF; putative chitobiose transport system permease protein
D PPM_0364 yurM1; putative ABC transporter permease protein yurM K17246 chiG; putative chitobiose transport system permease protein
D PPM_0814 araN; putative arabinose-binding protein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D PPM_0815 araP; L-arabinose transport system permease protein araP K17235 araP; arabinooligosaccharide transport system permease protein
D PPM_0816 araQ3; L-arabinose transport system permease protein araQ K17236 araQ; arabinooligosaccharide transport system permease protein
D PPM_1028 chvE; multiple sugar-binding periplasmic receptor chvE Flags: Precursor K10546 chvE; putative multiple sugar transport system substrate-binding protein
D PPM_1030 araH; xylose transport system permease protein xylH K10547 gguB; putative multiple sugar transport system permease protein
D PPM_1029 araG; ribose ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PPM_1336 yufN; basic membrane protein A1 Immunodominant antigen P39; Flags: Precursor K07335 bmpA; basic membrane protein A and related proteins
D PPM_3513 M1_3882; Basic membrane protein A2 K07335 bmpA; basic membrane protein A and related proteins
D PPM_1338 yufP; uncharacterized protein K23535 nupB; general nucleoside transport system permease protein
D PPM_1339 yufQ; uncharacterized protein K23536 nupC; general nucleoside transport system permease protein
D PPM_1337 M1_1571; ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PPM_1021 purR4; HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein
D PPM_2551 rbsB3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K10439 rbsB; ribose transport system substrate-binding protein
D PPM_2552 rbsC1; ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein
D PPM_2553 rbsA1; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PPM_2554 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PPM_1174 upgB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PPM_1172 ugpA1; sn-glycerol-3-phosphate transport system permease protein ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PPM_1173 ugpE1; sn-glycerol-3-phosphate transport system permease protein ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PPM_1566 pstS; phosphate-binding protein pstS PBP; Flags: Precursor K02040 pstS; phosphate transport system substrate-binding protein
D PPM_1567 pstC; phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D PPM_1568 pstA; phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D PPM_1569 pstB3; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PPM_1582 pstB5; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PPM_4339 phnD; Phosphonates-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D PPM_4341 phnE; putative phosphonates transport system permease protein phnE K02042 phnE; phosphonate transport system permease protein
D PPM_4342 ptxC; Phosphite transport system permease protein ptxC K02042 phnE; phosphonate transport system permease protein
D PPM_2587 phnC1; methionine import ATP-binding protein metN K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PPM_4340 phnC3; Spermidine/putrescine import ATP-binding protein potA K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PPM_0831 glnP5; membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor K10036 glnH; glutamine transport system substrate-binding protein
D PPM_0832 glnQ5; putative ABC transporter (ATP-binding protein) K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0398 glnH; glutamine-binding protein GlnBP; Flags: Precursor K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D PPM_0396 glnP1; inner membrane amino-acid ABC transporter permease protein yecS K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PPM_0397 glnP3; L-cystine transport system permease protein tcyB K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PPM_0399 glnQ1; amino acid ABC transporter, ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0799 fliY1; membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_3750 fliY5; putative amino-acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_4901 tcyJ; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_0800 yecS; L-cystine transport system permease protein tcyB K10009 tcyB; L-cystine transport system permease protein
D PPM_3749 tcyB; L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein
D PPM_4900 tcyL; Inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D PPM_3748 yckI; amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0801 glnQ3; amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_4899 M1_5347; Phosphate import ATP-binding protein pstB K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_2090 ytmJ; L-cystine-binding protein tcyK Flags: Precursor K16957 tcyK; L-cystine transport system substrate-binding protein
D PPM_2091 ytmL; histidine transport system permease protein hisM K16958 tcyL; L-cystine transport system permease protein
D PPM_2092 occM3; Octopine transport system permease protein occM K16959 tcyM; L-cystine transport system permease protein
D PPM_2093 hisP; amino acid ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_2578 arpJ; inner membrane amino-acid ABC transporter permease protein yecS K17077 artQ; arginine/lysine/histidine transport system permease protein
D PPM_2577 glnQ9; amino acid ABC transporter (ATP-binding protein) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0893 metQ3; Outer membrane lipoprotein 1 K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_0549 metQ1; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_4108 metQ5; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_3641 sfbA; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_0436 metI; putative D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D PPM_0892 metI1; putative D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PPM_4109 yaeE; putative D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D PPM_0435 metN5; methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D PPM_0891 metN1; methionine import ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PPM_4110 abc; Methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D PPM_0936 oppA3; dipeptide-binding protein dppE Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3371 dppE; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3370 oppB7; Dipeptide transport system permease protein dppB K15581 oppB; oligopeptide transport system permease protein
D PPM_0938 oppB3; oligopeptide transport system permease protein oppB Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D PPM_3369 oppC7; Glutathione transport system permease protein gsiD K15582 oppC; oligopeptide transport system permease protein
D PPM_0937 dppC1; dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D PPM_3732 oppD5; Oligopeptide transport ATP-binding protein oppD Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D PPM_3368 oppF5; Phosphate import ATP-binding protein pstB K10823 oppF; oligopeptide transport system ATP-binding protein
D PPM_4906 nikA; peptide/nickel transport system substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D PPM_4905 nikB3; peptide/nickel transport system permease protein K15585 nikB; nickel transport system permease protein
D PPM_4904 nikC1; peptide/nickel transport system permease protein K15586 nikC; nickel transport system permease protein
D PPM_4903 nikD; peptide/nickel transport system ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PPM_4902 nikE; peptide/nickel transport system ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PPM_0805 cbrA1; achromobactin-binding periplasmic protein Flags: Precursor K23181 fecB; ferric citrate transport system substrate-binding protein
D PPM_0803 yfmE; Vitamin B12 import system permease protein btuC K23182 fecD; ferric citrate transport system permease protein
D PPM_0804 yfmD; Vitamin B12 import system permease protein btuC K23183 fecC; ferric citrate transport system permease protein
D PPM_3050 fhuD7; iron(III) dicitrate-binding periplasmic protein Flags: Precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PPM_1443 cbrA5; achromobactin-binding periplasmic protein Flags: Precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PPM_1444 fhuB5; ferrichrome transport system permease protein fhuB Ferrichrome uptake protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PPM_2142 psaA3; manganese ABC transporter substrate-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D PPM_2141 adcB; manganese transport system membrane protein mntB K09816 znuB; zinc transport system permease protein
D PPM_2140 adcC; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PPM_1221 psaA1; manganese ABC transporter substrate-binding lipoprotein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PPM_1223 troC; manganese transport system membrane protein mntC K11708 troC; manganese/zinc/iron transport system permease protein
D PPM_1224 mntD; manganese transport system membrane protein mntD K11709 troD; manganese/zinc/iron transport system permease protein
D PPM_1222 mntA; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PPM_0890 ykoC; putative HMP/thiamine permease protein ykoC K16785 ecfT; energy-coupling factor transport system permease protein
D PPM_0693 cbiQ; putative HMP/thiamine permease protein ykoC K16785 ecfT; energy-coupling factor transport system permease protein
D PPM_4507 rfbB; putative ribose/galactose/methyl galactoside import ATP-binding protein 1 K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PPM_4508 rfbA5; O-antigen export system permease protein rfbA K09692 tagG; teichoic acid transport system permease protein
D PPM_4862 bcrB7; Bacitracin transport permease protein BCRB K19310 bcrB; bacitracin transport system permease protein
D PPM_4863 M1_5311; antibiotic transport system permease protein K19310 bcrB; bacitracin transport system permease protein
D PPM_4864 potA3; Spermidine/putrescine import ATP-binding protein potA K19309 bcrA; bacitracin transport system ATP-binding protein
D PPM_4957 bceB; Bacitracin export permease protein bceB K11632 bceB; bacitracin transport system permease protein
D PPM_4956 bceA; Bacitracin export ATP-binding protein bceA K11631 bceA; bacitracin transport system ATP-binding protein
D PPM_0451 bcrB1; bacitracin transport permease protein BCRB K20460 nukE; lantibiotic transport system permease protein
D PPM_1419 M1_1656; hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D PPM_0452 mrsE1; hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D PPM_1420 mrsE3; hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D PPM_0450 bcrA1; spermidine/putrescine import ATP-binding protein potA K20459 nukF; lantibiotic transport system ATP-binding protein
D PPM_1418 ccmA3; ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D PPM_2485 M1_2801; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D PPM_2486 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
D PPM_2484 spaF; spermidine/putrescine import ATP-binding protein potA K20490 nisF; lantibiotic transport system ATP-binding protein
D PPM_4534 ftsX; Macrolide export ATP-binding/permease protein macB K09811 ftsX; cell division transport system permease protein
D PPM_4535 ftsE; Methionine import ATP-binding protein metN K09812 ftsE; cell division transport system ATP-binding protein
D PPM_0987 M1_1190; hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D PPM_0986 potA5; spermidine/putrescine import ATP-binding protein potA K16921 ytrB; acetoin utilization transport system ATP-binding protein
D PPM_1980 msbA7; lipid A export ATP-binding/permease protein MsbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2852 yknU; lipid A export ATP-binding/permease protein msbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_1979 yheH; lipid A export ATP-binding/permease protein msbA K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2851 yknV; uncharacterized ABC transporter ATP-binding protein yknV K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_3840 yvcC3; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_1078 yvcC1; lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_0971 yfiB3; lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2356 msbA1; lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0117 yfiB1; lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2357 msbA2; lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0972 yfiC3; lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0116 yfiC1; lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_4297 cydD3; Lipid A export ATP-binding/permease protein msbA K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PPM_4298 cydC; Lipid A export ATP-binding/permease protein msbA K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PPM_2727 M1_3061; putative ABC transporter ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ppo02060]
D PPM_3171 ptsI1; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PPM_3795 ptsI3; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PPM_3156 hpr1; phosphocarrier protein HPr Histidine-containing protein K02784 ptsH; phosphocarrier protein HPr
D PPM_3796 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PPM_3172 glcA; PTS system, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_3797 ptsG3; PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_0103 bglP3; PTS system, glucose-specific enzyme II, A component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PPM_3919 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PPM_0287 ptsG1; PTS system, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D PPM_1039 scrA5; PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0728 scrA3; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0314 scrA1; putative sucrose-specific PTS permease, enzyme II K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_1264 bglP1; beta-glucosides-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_4015 bglP9; PTS system, beta-glucosides specific enzyme IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_3611 bglP5; PTS system, beta-glucosides specific enzyme IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_3933 arbF3; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_4156 bglP11; PTS system, beta-glucoside-specific enzyme II, ABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_1266 bglP2; PTS system, beta-glucosides-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_1610 arbF1; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_0628 treP; PTS system, trehalose-specific enzyme II, BC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PPM_4972 manP; PTS system, mannose-specific IIA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D PPM_3788 mtlA1; PTS system, mannitol specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D PPM_3790 mtlA3; PTS system, mannitol-specific enzyme II, BC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PPM_4022 lacF9; Lactose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4885 ydhN3; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4164 licA3; Lactose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4025 celA5; PTS system lactose-specific EIICB component EIICB-Lac K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4886 ydhM; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4165 lacEIICB; PTS system lactose-specific EIICB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4023 licC; PTS system lactose-specific EIICB component EIICB-Lac K02761 celB; cellobiose PTS system EIIC component
D PPM_4884 ydhO3; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PPM_4166 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PPM_0443 manX1; PTS enzyme IIAB, mannose-specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PPM_0444 manX3; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PPM_0445 sorA; sorbose permease IIC component PTS system sorbose-specific EIIC component; EIIC-Sor K02795 manY; mannose PTS system EIIC component
D PPM_0446 manZ; mannose permease IID component PTS system mannose-specific EIID component; EIID-Man; EII-M-Man K02796 manZ; mannose PTS system EIID component
D PPM_3720 sgaT; Ascorbate-specific permease IIC component ulaA Ascorbate-specific PTS system EIIC component K03475 ulaA; ascorbate PTS system EIIC component
D PPM_1605 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PPM_1604 fruB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:ppo03070]
D PPM_3855 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D PPM_3854 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D PPM_4469 secE; putative preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D PPM_0175 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D PPM_4434 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PPM_3860 yajC; UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC
D PPM_2192 yqjG; inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_5069 oxaA; Inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_1454 secA1; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_4554 secA3; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_1852 ftsY; signal recognition particle 54 kDa protein 2 K03110 ftsY; fused signal recognition particle receptor
D PPM_1855 ffH; signal recognition particle 54 kDa protein 2 SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PPM_1156 tatB; tatB-like, Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D PPM_1157 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ppo02020]
D PPM_1579 phoR1; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_2083 sasA; adaptive-response sensory-kinase SasA K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_1412 yycG1; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_4319 resE7; sensor protein ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_1580 ycf27; putative transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_2603 ykoG5; phosphate regulon transcriptional regulatory protein phoB K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_4723 phoP5; Alkaline phosphatase synthesis transcriptional regulatory protein phoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_1411 yycF; transcriptional regulatory protein YycF K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_1284 phoB1; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2871 phoB3; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_1416 yvrH; transcriptional regulatory protein yvrH K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PPM_2268 yclJ; sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PPM_1566 pstS; phosphate-binding protein pstS PBP; Flags: Precursor K02040 pstS; phosphate transport system substrate-binding protein
D PPM_4514 M1_4946; peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_5030 yyxA; putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_1386 htrA; peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_4571 hag; Flagellar filament 33 kDa core protein Class B K02406 fliC; flagellin
D PPM_1912 sigD; RNA polymerase sigma factor rpoD Sigma-70 K02405 fliA; RNA polymerase sigma factor FliA
D PPM_0094 motA1; chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_4519 motA3; Chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_1225 kdpD1; osmosensitive K+ channel His kinase sensor domain K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PPM_2341 kdpD3; two-component system, OmpR family, sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PPM_2342 kdpE; transcriptional regulatory protein yycF K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PPM_1210 kdpA; potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PPM_1211 kdpB; potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PPM_1212 kdpC; potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PPM_3510 UPF0065 protein K07795 tctC; putative tricarboxylic transport membrane protein
D PPM_2970 resE5; sensor histidine kinase ResE K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D PPM_3734 srrA3; putative transcriptional regulator ycf27 OmpR-like protein K07775 resD; two-component system, OmpR family, response regulator ResD
D PPM_2971 resD3; transcriptional regulatory protein resD K07775 resD; two-component system, OmpR family, response regulator ResD
D PPM_4113 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PPM_5035 yycG3; two-component system, OmpR family, sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PPM_5036 walR3; Transcriptional regulatory protein yycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D PPM_1423 ompR; alkaline phosphatase synthesis transcriptional regulatory protein sphR K07668 vicR; two-component system, OmpR family, response regulator VicR
D PPM_0698 sacB; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D PPM_1387 mprA1; response regulator mprA Mycobacterial persistence regulator A K07669 mprA; two-component system, OmpR family, response regulator MprA
D PPM_0001 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D PPM_4955 bceS; integral membrane sensor signal transduction histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D PPM_4954 bceR; Response regulator protein graR Glycopeptide resistance-associated protein R K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D PPM_4956 bceA; Bacitracin export ATP-binding protein bceA K11631 bceA; bacitracin transport system ATP-binding protein
D PPM_4957 bceB; Bacitracin export permease protein bceB K11632 bceB; bacitracin transport system permease protein
D PPM_0463 mprF; putative lysylphosphatidylglycerol synthetase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PPM_4176 yxdK; sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D PPM_4177 yxdJ; Transcriptional regulatory protein yycF K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D PPM_4175 potA9; Spermidine/putrescine import ATP-binding protein potA K11635 yxdL; putative ABC transport system ATP-binding protein
D PPM_4174 yxdM; ABC transporter permease protein yxdM K11636 yxdM; putative ABC transport system permease protein
D PPM_0646 cseA; sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D PPM_2167 walR1; transcriptional regulatory protein WalR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D PPM_0534 yodJ; D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PPM_1408 ykoH1; signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PPM_2197 ykoH3; two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PPM_1409 ykoG1; uncharacterized transcriptional regulatory protein ykoG K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PPM_2196 ykoG3; uncharacterized transcriptional regulatory protein ykoG K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PPM_2488 eTR1; ethylene receptor MEETR1; Cm-ETR1 K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D PPM_2487 yycF1; transcriptional regulatory protein yycF K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D PPM_2390 resD1; transcriptional regulatory protein resD K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D PPM_1424 bsaB; subtilin biosynthesis protein spaB K20483 lanB; class I lanthipeptide synthase [EC:3.13.2.4]
D PPM_1422 spaC2; subtilin biosynthesis protein spaC K20484 lanC; class I lanthipeptide synthase [EC:3.13.2.4]
D PPM_1421 spaC1; subtilin biosynthesis protein spaC K20484 lanC; class I lanthipeptide synthase [EC:3.13.2.4]
D PPM_0342 spaT; lipid A export ATP-binding/permease protein msbA K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D PPM_1425 msbA5; ABC transporter ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D PPM_2484 spaF; spermidine/putrescine import ATP-binding protein potA K20490 nisF; lantibiotic transport system ATP-binding protein
D PPM_2485 M1_2801; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D PPM_2486 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
D PPM_4055 kinB3; sporulation kinase B K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D PPM_1011 kinB1; sporulation kinase B K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D PPM_0091 kinE; sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D PPM_0132 spo0F; stage 0 sporulation protein F K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D PPM_3875 spo0D; Sporulation initiation phosphotransferase B K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D PPM_3021 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D PPM_1542 dcuB; anaerobic C4-dicarboxylate transporter dcuA K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PPM_3431 dcuS; sensory box histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PPM_4923 yufL; two-component system, CitB family, sensor histidine kinase MalK K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PPM_3430 dcuR; Transcriptional regulatory protein malR Malate response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D PPM_4922 malR3; two-component system, CitB family, response regulator MalR K11615 malR; two-component system, CitB family, response regulator MalR
D PPM_1277 me; malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3945 malS; putative malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3428 M1_3795; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3194 ykwA; malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PPM_3429 maeN; Citrate/malate transporter Citrate/malate-proton symporter K11616 maeN; malate:Na+ symporter
D PPM_1835 M1_2104; accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D PPM_3780 ypdA3; putative sensor protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3]
D PPM_3779 ypdB; putative response regulatory protein K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator
D PPM_3778 yhjX; Inner membrane protein YhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PPM_1090 yhcZ; response regulator gacA Global activator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PPM_3624 narG; nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3623 narH; respiratory nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3621 narI; nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3622 narJ; nitrate reductase delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D PPM_0921 yfiJ; two-component protein kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PPM_4572 csrA; Carbon storage regulator-like protein K03563 csrA; carbon storage regulator
D PPM_4585 degS; two-component sensor histidine kinase involved in degradative enzyme K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D PPM_4584 degU; Transcriptional regulatory protein degU Protease production enhancer protein K07692 degU; two-component system, NarL family, response regulator DegU
D PPM_0862 desK; sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PPM_0863 desR; transcriptional regulatory protein uhpA K07693 desR; two-component system, NarL family, response regulator DesR
D PPM_0861 des; fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PPM_4188 yvqE3; sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D PPM_4187 yvqC; Transcriptional regulatory protein liaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D PPM_4189 yvqF; Protein liaF K11622 liaF; lia operon protein LiaF
D PPM_3619 nreB; hypothetical protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D PPM_0371 M1-535; pas/pac sensor signal transduction histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D PPM_0372 nreC1; chemotaxis response regulator protein-glutamate methylesterase K07696 nreC; two-component system, NarL family, response regulator NreC
D PPM_3618 nreC5; Transcriptional regulatory protein uhpA K07696 nreC; two-component system, NarL family, response regulator NreC
D PPM_0373 nreA1; hypothetical protein K10851 nreA; nitrogen regulatory protein A
D PPM_3620 nreA3; hypothetical protein K10851 nreA; nitrogen regulatory protein A
D PPM_4385 ydfH3; two-component system, NarL family, sensor histidine kinase YdfH K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D PPM_4384 ydfI; putative transcriptional regulatory protein yfiK K11624 ydfI; two-component system, NarL family, response regulator YdfI
D PPM_1397 narP; transcriptional regulatory protein degU Protease production enhancer protein K11624 ydfI; two-component system, NarL family, response regulator YdfI
D PPM_1227 cpaF; flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_2615 tadA; type II secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_p0111 pPPM1a_129; AAA ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_1228 tadB; hypothetical Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PPM_1229 tadC; flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PPM_1391 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_2801 glnA3; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_1144 atoD; acetate CoA-transferase alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D PPM_1143 atoA; butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_0441 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PPM_2934 cheR3; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PPM_4233 cheR5; methyltransferase, CheR family K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PPM_1000 mcpA1; methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_0475 tse; methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1182 mcpA3; methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1581 aer; methyl-accepting chemotaxis protein II MCP-II; Aspartate chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1263 mcpA5; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1792 mcpB1; methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1798 yoaH; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1807 cheW1; methyl-accepting chemotaxis protein 1 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_2266 cheW5; methyl-accepting chemotaxis protein mcpA H1 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_5016 mcpC; Laminin subunit alpha-1 Laminin A chain K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3575 mcpA7; Methyl-accepting chemotaxis protein mcpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3600 tlpA3; Methyl-accepting chemotaxis protein 4 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3782 M1_4175; hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3018 tlpA1; methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3816 tar; Methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3826 mcpB3; Methyl-accepting chemotaxis protein mcpC K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3850 cheW9; Methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3196 cheW7; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3976 tlpB1; Methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_4719 tlpB3; Methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1908 cheW3; putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PPM_4357 cheW11; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D PPM_1907 cheA; two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PPM_1897 cheY1; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_2145 cheY3; putative transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_1906 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PPM_4936 fnr7; Fumarate and nitrate reduction regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PPM_0294 ycbA; sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D PPM_0293 ycbB1; chemotaxis response regulator protein-glutamate methylesterase K07719 glnL; two-component system, response regulator GlnL
D PPM_2509 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PPM_0751 yesM11; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0269 yesM1; two-component sensor histidine kinase-like protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0379 yesM3; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0526 yesM5; two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0552 yesM7; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_1022 yesM13; two-component sensor kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0661 yesM9; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2065 yesM15; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2300 yesM17; two-component sensor kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_3717 yesM23; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4302 yesM27; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_3203 yesM21; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4838 yesM29; integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4148 yesM25; two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2459 yesM19; two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4868 yesM31; two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0752 yesN7; chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K07720 yesN; two-component system, response regulator YesN
D PPM_0270 yesN1; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_0977 yesN9; chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K07720 yesN; two-component system, response regulator YesN
D PPM_0380 yesN3; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_0525 ntrC; nitrogen regulation protein NR(I) K07720 yesN; two-component system, response regulator YesN
D PPM_0553 araC7; chemotaxis response regulator protein-glutamate methylesterase 3 K07720 yesN; two-component system, response regulator YesN
D PPM_1023 yesN11; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_0662 yesN5; uncharacterized transcriptional regulatory protein yesN K07720 yesN; two-component system, response regulator YesN
D PPM_2301 yesN13; uncharacterized transcriptional regulatory protein yesN K07720 yesN; two-component system, response regulator YesN
D PPM_2458 yesN15; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_4867 yesN21; Nitrogen assimilation regulatory protein ntrC K07720 yesN; two-component system, response regulator YesN
D PPM_4301 yesN19; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K07720 yesN; two-component system, response regulator YesN
D PPM_3202 yesN17; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_4839 cheR2; Chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_4149 cheR1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K07720 yesN; two-component system, response regulator YesN
D PPM_2066 rr09; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_3258 ytdP1; HTH-type transcriptional regulator yesS K07720 yesN; two-component system, response regulator YesN
D PPM_3716 tctD; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K07720 yesN; two-component system, response regulator YesN
D PPM_4300 cydA3; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PPM_4257 cydA1; putative cytochrome ubiquinol oxidase K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PPM_4299 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PPM_4256 cbdB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PPM_2600 yfkJ; protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PPM_4034 capG; capsular polysaccharide synthesis enzyme Cap5G K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PPM_4625 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PPM_3251 PME2; Pectinesterase-2 PE 2 K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D PPM_2317 celA1; cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_3722 celA3; cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_3757 bglC5; endo-1,4-beta-glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_5029 celC; cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_2417 celE1; endoglucanase E Endo-1,4-beta-glucanase E; EgE; Cellulase E; Flags: Precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PPM_0982 guxA; 1,4-beta-cellobiosidase K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D PPM_4763 dhkJ; multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PPM_4232 ETR2; histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PPM_4578 flgM; Negative regulator of flagellin synthesis Anti-sigma-D factor K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PPM_3951 M1_4349; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ppo02024]
D PPM_0547 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PPM_2809 hfq; protein hfq K03666 hfq; host factor-I protein
D PPM_2930 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PPM_2342 kdpE; transcriptional regulatory protein yycF K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PPM_0921 yfiJ; two-component protein kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PPM_p0044 shmt1; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D PPM_4749 potD3; Spermidine/putrescine-binding periplasmic protein SPBP K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PPM_4746 potC3; Molybdate/tungstate transport system permease protein wtpB K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PPM_4747 cysT7; putative sulfate transport system permease protein cysT K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PPM_4745 potA11; Spermidine/putrescine import ATP-binding protein potA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PPM_2544 hagH; hydroxyacylglutathione hydrolase Glyoxalase II; Glx II K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D PPM_3486 M1_3854; N-acyl homoserine lactone hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D PPM_3731 pel1; pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D PPM_0073 fecS; feruloyl-CoA synthetase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PPM_4936 fnr7; Fumarate and nitrate reduction regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PPM_0459 ydhT1; chW repeat-containing mannanase ManB K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_1107 manA5; mannan endo-1,4-beta-mannosidase A K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_0613 manA3; mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_3238 ydhT3; mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_4528 celA7; glycoside hydrolase family protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_2466 celN; glycoside hydrolase family 5 domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_0557 maNB; mannan endo-1,4-beta-mannosidase B K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PPM_4362 ribA3; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D PPM_4361 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PPM_4642 M1_5078; hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PPM_4644 M1_5080; hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PPM_1835 M1_2104; accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D PPM_0936 oppA3; dipeptide-binding protein dppE Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3371 dppE; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3370 oppB7; Dipeptide transport system permease protein dppB K15581 oppB; oligopeptide transport system permease protein
D PPM_0938 oppB3; oligopeptide transport system permease protein oppB Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D PPM_3369 oppC7; Glutathione transport system permease protein gsiD K15582 oppC; oligopeptide transport system permease protein
D PPM_0937 dppC1; dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D PPM_3732 oppD5; Oligopeptide transport ATP-binding protein oppD Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D PPM_3368 oppF5; Phosphate import ATP-binding protein pstB K10823 oppF; oligopeptide transport system ATP-binding protein
D PPM_0394 oppA1; oligopeptide-binding protein oppA Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_2101 oppA5; periplasmic oligopeptide-binding protein Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_2494 M1_2811; periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_1074 dppA; periplasmic dipeptide transport protein Dipeptide-binding protein; DBP; Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_5052 dbp; Periplasmic dipeptide transport protein Dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_4911 M1_5359; Periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_0392 oppB1; dipeptide transport system permease protein dppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_2102 oppB5; inner membrane ABC transporter permease protein yejB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_2495 nikB1; nickel transport system permease protein nikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_5051 oppB9; Oligopeptide transport system permease protein appB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_1075 dppB; putative D,D-dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_0393 oppC1; glutathione transport system permease protein gsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_2103 oppC5; oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_2496 dppC3; dipeptide transport system permease protein dppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_5050 oppC9; Glutathione transport system permease protein gsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_1076 oppC3; glutathione transport system permease protein gsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_4908 oppD7; Sulfate/thiosulfate import ATP-binding protein cysA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_5049 oppD9; Phosphate import ATP-binding protein pstB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_2104 oppD3; oligopeptide transport ATP-binding protein oppD Stage 0 sporulation protein KD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_0390 oppD1; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_2497 pstB7; phosphate import ATP-binding protein pstB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_0391 oppF1; methionine import ATP-binding protein metN K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PPM_2105 oppF3; dipeptide transport ATP-binding protein dppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PPM_5048 oppF9; Dipeptide transport ATP-binding protein dppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PPM_2192 yqjG; inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_5069 oxaA; Inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_4469 secE; putative preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D PPM_0175 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D PPM_4434 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PPM_3860 yajC; UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC
D PPM_1454 secA1; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_4554 secA3; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_1852 ftsY; signal recognition particle 54 kDa protein 2 K03110 ftsY; fused signal recognition particle receptor
D PPM_1855 ffH; signal recognition particle 54 kDa protein 2 SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PPM_4584 degU; Transcriptional regulatory protein degU Protease production enhancer protein K07692 degU; two-component system, NarL family, response regulator DegU
D PPM_0132 spo0F; stage 0 sporulation protein F K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D PPM_3875 spo0D; Sporulation initiation phosphotransferase B K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D PPM_3021 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D PPM_1424 bsaB; subtilin biosynthesis protein spaB K20483 lanB; class I lanthipeptide synthase [EC:3.13.2.4]
D PPM_1422 spaC2; subtilin biosynthesis protein spaC K20484 lanC; class I lanthipeptide synthase [EC:3.13.2.4]
D PPM_1421 spaC1; subtilin biosynthesis protein spaC K20484 lanC; class I lanthipeptide synthase [EC:3.13.2.4]
D PPM_0342 spaT; lipid A export ATP-binding/permease protein msbA K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D PPM_1425 msbA5; ABC transporter ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D PPM_2488 eTR1; ethylene receptor MEETR1; Cm-ETR1 K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D PPM_2487 yycF1; transcriptional regulatory protein yycF K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D PPM_2390 resD1; transcriptional regulatory protein resD K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D PPM_2484 spaF; spermidine/putrescine import ATP-binding protein potA K20490 nisF; lantibiotic transport system ATP-binding protein
D PPM_2485 M1_2801; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D PPM_2486 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ppo02030]
D PPM_1000 mcpA1; methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_0475 tse; methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1182 mcpA3; methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1581 aer; methyl-accepting chemotaxis protein II MCP-II; Aspartate chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1263 mcpA5; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1792 mcpB1; methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1798 yoaH; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1807 cheW1; methyl-accepting chemotaxis protein 1 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_2266 cheW5; methyl-accepting chemotaxis protein mcpA H1 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_5016 mcpC; Laminin subunit alpha-1 Laminin A chain K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3575 mcpA7; Methyl-accepting chemotaxis protein mcpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3600 tlpA3; Methyl-accepting chemotaxis protein 4 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3782 M1_4175; hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3018 tlpA1; methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3816 tar; Methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3826 mcpB3; Methyl-accepting chemotaxis protein mcpC K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3850 cheW9; Methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3196 cheW7; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3976 tlpB1; Methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_4719 tlpB3; Methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1021 purR4; HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein
D PPM_2551 rbsB3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K10439 rbsB; ribose transport system substrate-binding protein
D PPM_1907 cheA; two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PPM_1908 cheW3; putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PPM_4357 cheW11; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D PPM_1897 cheY1; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_2145 cheY3; putative transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_1909 cheC; cheY-P phosphatase cheC K03410 cheC; chemotaxis protein CheC
D PPM_4060 cheX; CheY-P phosphatase cheX K03409 cheX; chemotaxis protein CheX
D PPM_1906 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PPM_1910 cheD; chemoreceptor glutamine deamidase cheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PPM_2934 cheR3; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PPM_4233 cheR5; methyltransferase, CheR family K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PPM_1884 fliG; flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D PPM_1895 fliM; flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D PPM_1896 fliY3; flagellar motor switch phosphatase fliY CheY-P phosphatase fliY; Flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D PPM_0094 motA1; chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_4519 motA3; Chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_0093 motB; chemotaxis protein motB Motility protein B K02557 motB; chemotaxis protein MotB
D PPM_4520 ytxE; Chemotaxis protein lafU K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ppo02040]
D PPM_1882 fliE; flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PPM_1883 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PPM_1884 fliG; flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D PPM_1885 fliH; flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH
D PPM_1886 fliI; flagellar-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PPM_1887 fliJ; flagellar fliJ protein K02413 fliJ; flagellar protein FliJ
D PPM_1889 flgC3; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PPM_1894 fliL; flagellar fliL protein K02415 fliL; flagellar protein FliL
D PPM_1895 fliM; flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D PPM_1896 fliY3; flagellar motor switch phosphatase fliY CheY-P phosphatase fliY; Flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D PPM_1898 fliZ; flagellar biosynthetic protein fliZ Flags: Precursor K02418 fliO; flagellar protein FliO/FliZ
D PPM_1899 fliP; flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D PPM_1900 fliQ; flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PPM_1901 fliR; flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D PPM_1903 flhA; flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D PPM_1902 flhB; flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D PPM_1880 flgB; flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D PPM_1881 flgC1; flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D PPM_1890 flgD; flaA locus uncharacterized protein ylxG ORF 8 K02389 flgD; flagellar basal-body rod modification protein FlgD
D PPM_1892 flgE; flagellar basal-body rod protein flgG Distal rod protein K02390 flgE; flagellar hook protein FlgE
D PPM_4607 flhO; Flagellar basal-body rod protein flgG Distal rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D PPM_4606 flhP; Flagellar basal-body rod protein flgG Distal rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D PPM_4576 flgK; Flagellar hook-associated protein 1 HAP1 K02396 flgK; flagellar hook-associated protein 1
D PPM_4575 flgL; Flagellar filament 33 kDa core protein Class B K02397 flgL; flagellar hook-associated protein 3 FlgL
D PPM_4571 hag; Flagellar filament 33 kDa core protein Class B K02406 fliC; flagellin
D PPM_4562 fliD; Flagellar hook-associated protein 2 HAP2 K02407 fliD; flagellar hook-associated protein 2
D PPM_4561 fliS; Flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS
D PPM_0094 motA1; chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_4519 motA3; Chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_0093 motB; chemotaxis protein motB Motility protein B K02557 motB; chemotaxis protein MotB
D PPM_4520 ytxE; Chemotaxis protein lafU K02557 motB; chemotaxis protein MotB
D PPM_4578 flgM; Negative regulator of flagellin synthesis Anti-sigma-D factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D PPM_0799 fliY1; membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_3750 fliY5; putative amino-acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_4901 tcyJ; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_2658 rpoD1; RNA polymerase sigma factor rpoD Sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D PPM_3393 sigA; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D PPM_0441 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PPM_1912 sigD; RNA polymerase sigma factor rpoD Sigma-70 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PPM_0174 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:ppo04981]
D PPM_1153 yqgN; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D PPM_2593 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PPM_4630 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PPM_2594 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PPM_4919 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D PPM_2689 metH; putative methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:ppo04980]
D PPM_1368 MMAB; cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PPM_2689 metH; putative methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ppo01501]
D PPM_0936 oppA3; dipeptide-binding protein dppE Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3371 dppE; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3370 oppB7; Dipeptide transport system permease protein dppB K15581 oppB; oligopeptide transport system permease protein
D PPM_0938 oppB3; oligopeptide transport system permease protein oppB Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D PPM_3369 oppC7; Glutathione transport system permease protein gsiD K15582 oppC; oligopeptide transport system permease protein
D PPM_0937 dppC1; dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D PPM_3732 oppD5; Oligopeptide transport ATP-binding protein oppD Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D PPM_3368 oppF5; Phosphate import ATP-binding protein pstB K10823 oppF; oligopeptide transport system ATP-binding protein
D PPM_3840 yvcC3; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_1078 yvcC1; lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_3163 pdpF3; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_3086 pdpF1; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_2808 pbpF; penicillin-binding protein 1 K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:ppo01502]
D PPM_0646 cseA; sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D PPM_2167 walR1; transcriptional regulatory protein WalR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D PPM_0746 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_2322 ddlB; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_1196 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PPM_3359 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PPM_3358 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PPM_0520 murG1; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PPM_3355 murG3; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PPM_0534 yodJ; D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppo01503]
D PPM_2858 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_2859 cwlB; N-acetylmuramoyl-L-alanine amidase CwlB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_4419 cwlD3; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_1742 cwlD1; putative N-acetylmuramoyl-L-alanine amidase yrvJ Flags: Precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_4514 M1_4946; peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_5030 yyxA; putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_1386 htrA; peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_0463 mprF; putative lysylphosphatidylglycerol synthetase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ppo01000]
C 01001 Protein kinases [BR:ppo01001]
D PPM_3126 prkC; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PPM_2680 pknB3; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PPM_4230 rsbW; anti-sigma b factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PPM_1092 epsB; putative tyrosine-protein kinase epsB K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PPM_1112 yveL; capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PPM_1579 phoR1; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_2083 sasA; adaptive-response sensory-kinase SasA K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_1412 yycG1; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_4319 resE7; sensor protein ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_1225 kdpD1; osmosensitive K+ channel His kinase sensor domain K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PPM_2341 kdpD3; two-component system, OmpR family, sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PPM_2970 resE5; sensor histidine kinase ResE K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D PPM_5035 yycG3; two-component system, OmpR family, sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PPM_4955 bceS; integral membrane sensor signal transduction histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D PPM_4176 yxdK; sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D PPM_0646 cseA; sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D PPM_1408 ykoH1; signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PPM_2197 ykoH3; two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PPM_2488 eTR1; ethylene receptor MEETR1; Cm-ETR1 K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D PPM_0354 phoR3; sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PPM_1388 lisK; sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PPM_0921 yfiJ; two-component protein kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PPM_4585 degS; two-component sensor histidine kinase involved in degradative enzyme K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D PPM_0862 desK; sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PPM_4188 yvqE3; sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D PPM_3619 nreB; hypothetical protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D PPM_0371 M1-535; pas/pac sensor signal transduction histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D PPM_4385 ydfH3; two-component system, NarL family, sensor histidine kinase YdfH K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D PPM_4055 kinB3; sporulation kinase B K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D PPM_1011 kinB1; sporulation kinase B K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D PPM_0091 kinE; sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D PPM_3431 dcuS; sensory box histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PPM_4923 yufL; two-component system, CitB family, sensor histidine kinase MalK K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PPM_0807 citS; sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D PPM_3780 ypdA3; putative sensor protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3]
D PPM_1907 cheA; two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PPM_0294 ycbA; sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D PPM_0751 yesM11; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0269 yesM1; two-component sensor histidine kinase-like protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0379 yesM3; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0526 yesM5; two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0552 yesM7; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_1022 yesM13; two-component sensor kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0661 yesM9; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2065 yesM15; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2300 yesM17; two-component sensor kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_3717 yesM23; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4302 yesM27; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_3203 yesM21; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4838 yesM29; integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4148 yesM25; two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2459 yesM19; two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4868 yesM31; two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4763 dhkJ; multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PPM_4232 ETR2; histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PPM_0407 M1-573; integral membrane sensor hybrid histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
D PPM_0439 ywpD; hypothetical protein K19694 chiS; two-component system, sensor histidine kinase ChiS
D PPM_2267 barA; cheY-like receiver K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ppo01009]
D PPM_3366 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_0345 htpG1; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPM_1650 htpG3; chaperone protein htpG Heat shock protein htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
D PPM_3127 prpC; protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PPM_3770 pppL; Protein phosphatase 1B K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ppo01002]
D PPM_3336 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PPM_1234 pulO; type 4 prepilin-like proteins leader peptide-processing enzyme K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PPM_3442 gpr; spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D PPM_3349 spoIIGA; sporulation sigma-E factor processing peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D PPM_0772 guaA3; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PPM_0099 spr1; cell wall-associated hydrolase (invasion-associated protein) K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PPM_2602 spr5; uncharacterized lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PPM_2198 spr3; uncharacterized protein ydhO Flags: Precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PPM_0793 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PPM_1088 gltA; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PPM_4407 glmS; glucosamine-fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PPM_0214 asnH; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PPM_1134 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PPM_3956 asnO; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PPM_3846 yhbO; hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124]
D PPM_3170 pfpI1; protease I K05520 yhbO; deglycase [EC:3.5.1.124]
D PPM_4366 pfpI3; Intracellular protease 1 K05520 yhbO; deglycase [EC:3.5.1.124]
D PPM_0402 srtA; uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D PPM_5011 srtB; sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D PPM_1835 M1_2104; accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D PPM_1522 caaX; hypothetical protein K07052 K07052; CAAX protease family protein
D PPM_2968 ypbD; uncharacterized protein ypbD K07052 K07052; CAAX protease family protein
D PPM_1697 yjbG; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PPM_4046 npr; neutral protease K01400 nprE; bacillolysin [EC:3.4.24.28]
D PPM_1677 yqgT; gamma-D-glutamyl-L-diamino acid endopeptidase I K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D PPM_0534 yodJ; D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PPM_2745 ycdD1; L-alanyl-D-glutamate peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PPM_3267 ycdD3; L-alanyl-D-glutamate peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PPM_1967 dp2; renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PPM_4823 pepT; tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PPM_3005 yqjE; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PPM_3151 yhaA3; N-acyl-L-amino acid amidohydrolase K01436 yhaA; amidohydrolase [EC:3.5.1.-]
D PPM_2562 yhaA1; N-acyl-L-amino acid amidohydrolase K01436 yhaA; amidohydrolase [EC:3.5.1.-]
D PPM_2095 hipO1; N-acyl-L-amino acid amidohydrolase K21613 scmP; N-acetylcysteine deacetylase [EC:3.5.1.-]
D PPM_3524 adpd; putative N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D PPM_4142 yunA; L-Ala-D-Glu endopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D PPM_0458 map1; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PPM_0577 map3; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PPM_2261 map5; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PPM_4432 map7; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PPM_3048 yqhT; proline dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PPM_3157 ampS5; aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D PPM_2283 ampS1; aminopeptidase AmpS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D PPM_2523 ampS3; aminopeptidase AmpS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D PPM_2822 ypwA; thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D PPM_0054 ftsH3; cell-division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PPM_2893 ftsH5; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PPM_1695 yhfE; peptidase, family M20/M25/M40 protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D PPM_3880 spoIVFB; stage IV sporulation protein FB K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D PPM_1925 yluC; membrane-associated zinc metalloprotease,putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PPM_2963 ypdC; protease prsW Protease responsible for activating sigma-W K24131 prsW; protease PrsW [EC:3.4.-.-]
D PPM_4514 M1_4946; peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_5030 yyxA; putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_1386 htrA; peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_0127 epr; extracellular serine protease K01342 aprE; subtilisin [EC:3.4.21.62]
D PPM_3387 apr; peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D PPM_3741 bprF; bacillopeptidase F K13276 bpr; bacillopeptidase F [EC:3.4.21.-]
D PPM_2049 ispA1; intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D PPM_0355 vpr; minor extracellular serine protease K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D PPM_3742 bprF2; bacillopeptidase F K17734 aprX; serine protease AprX [EC:3.4.21.-]
D PPM_0081 dacA1; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_2995 dacF; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_5047 dacA3; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_2975 dacB; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_0168 clpP1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PPM_2257 clpP3; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PPM_3910 clpP5; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PPM_3906 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PPM_3907 lonB; Lon-like ATP-dependent protease K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D PPM_1839 ylbL; PDZ domain protein K07177 K07177; Lon-like protease
D PPM_2695 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PPM_0732 sipS1; signal peptidase I T SPase I; Leader peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PPM_1861 sipS3; signal peptidase I S K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PPM_4871 sipM; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PPM_2296 yclE; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PPM_4532 ctpB; carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PPM_0773 M1-966; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PPM_3022 spoIVB; spoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D PPM_1878 clpQ; two-component ATP-dependent protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PPM_3817 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PPM_3818 yrrN; peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PPM_4511 ydcP; putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PPM_3665 pmbA; Protein pmbA K03592 pmbA; PmbA protein
D PPM_3666 tldD; tldD-like protein K03568 tldD; TldD protein
D PPM_0908 yoeB; uncharacterized protein yoeB Flags: Precursor K23598 iseA; iseA protein
C 01003 Glycosyltransferases [BR:ppo01003]
D PPM_1095 exoM; polypeptide N-acetylgalactosaminyltransferase 11 K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356]
D PPM_1330 ypfP; hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2448 ugtP3; 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2450 ugtP5; 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_0574 ugtP1; processive diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D PPM_2581 glgA3; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PPM_3163 pdpF3; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_3086 pdpF1; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_2808 pbpF; penicillin-binding protein 1 K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PPM_0113 pbpG; penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D PPM_1097 tagA1; UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PPM_1121 wecG; UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PPM_4599 tagA3; N-acetylglucosaminyldiphosphoundecaprenol K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PPM_4598 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PPM_0698 sacB; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppo01005]
D PPM_0351 ykcC; glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PPM_4542 ara4FN; putative glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PPM_4598 tagO; UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppo01011]
D PPM_0134 murZ; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_3353 murA3; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_4612 murA5; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PPM_3354 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PPM_3891 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PPM_3357 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PPM_3360 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PPM_0746 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_2322 ddlB; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PPM_1196 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PPM_1676 murI1; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PPM_2045 murI3; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PPM_2397 murI5; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PPM_3358 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PPM_0520 murG1; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PPM_3355 murG3; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PPM_4310 bacA3; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2451 M1_2764; uncharacterized protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_1331 pgpB1; PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2194 pgpB3; lipid phosphate phosphohydrolase 3 K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_2195 bcrC; uncharacterized protein ywoA K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PPM_3163 pdpF3; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_3086 pdpF1; penicillin-binding protein 1A K03693 pbp1b; penicillin-binding protein 1B
D PPM_2808 pbpF; penicillin-binding protein 1 K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PPM_0113 pbpG; penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D PPM_3362 pbpB; Stage V sporulation protein D Sporulation-specific penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D PPM_3361 spoVD; Stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D PPM_4120 pbp3; Penicillin-binding protein 2 PBP-2 K21465 pbpA; penicillin-binding protein A
D PPM_3815 pbp; Penicillin-binding protein 2 PBP-2 K21468 pbpI; penicillin-binding protein 4B
D PPM_0081 dacA1; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_2995 dacF; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_5047 dacA3; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_2975 dacB; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PPM_0534 yodJ; D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PPM_0099 spr1; cell wall-associated hydrolase (invasion-associated protein) K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PPM_2602 spr5; uncharacterized lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PPM_2198 spr3; uncharacterized protein ydhO Flags: Precursor K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D PPM_4142 yunA; L-Ala-D-Glu endopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D PPM_2745 ycdD1; L-alanyl-D-glutamate peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PPM_3267 ycdD3; L-alanyl-D-glutamate peptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D PPM_0402 srtA; uncharacterized protein yhcS K07284 srtA; sortase A [EC:3.4.22.70]
D PPM_5011 srtB; sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D PPM_1588 slt; putative transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PPM_3819 yrrL; hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PPM_3243 sleB3; spore cortex-lytic enzyme prepeptide K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PPM_1951 sleB1; spore cortex-lytic enzyme prepeptide K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PPM_4611 spoIID; Stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D PPM_2858 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_2859 cwlB; N-acetylmuramoyl-L-alanine amidase CwlB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_4419 cwlD3; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_1742 cwlD1; putative N-acetylmuramoyl-L-alanine amidase yrvJ Flags: Precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ppo01004]
D PPM_1846 fabD3; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_0913 fabD1; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_2386 fabD5; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PPM_1845 fabH3; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PPM_0778 fabH1; 3-oxoacyl-(acyl-carrier-protein) synthase III,putative K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PPM_3241 fabH5; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PPM_1849 fabF3; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_0076 fabF1; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_1748 fabFB; [acyl-carrier protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PPM_1847 fabG5; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_1954 fabG7; [acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2312 M1_2611; [acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_2558 fabG1; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4107 fabG11; 3-oxoacyl-(acyl-carrier-protein) reductase, putative K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4930 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_4935 M1_5384; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0849 scd; short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PPM_0077 fabZ1; (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PPM_4604 fabZ3; 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PPM_0072 fabI; enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PPM_1661 M1_1918; putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PPM_3737 M1_4127; putative reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D PPM_0861 des; fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D PPM_3218 pksM3; putative polyketide synthase pksM K13611 pksJ; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksJ/BaeJ
D PPM_3216 pksL; putative polyketide synthase pksL PKS K13613 pksM; bacillaene polyketide synthase PksM/BaeM
D PPM_3215 pksJ; putative polyketide synthase pksJ PKS K13614 pksN; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksN/BaeN
D PPM_2282 acsA1; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_3164 acsA3; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PPM_0073 fecS; feruloyl-CoA synthetase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PPM_1844 plsX; fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PPM_2956 M1_3299; UPF0078 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PPM_2959 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ppo01008]
D PPM_3212 pfaD; fatty acid synthase subunit beta K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
D PPM_3213 pksD; hypothetical protein K15328 pksD; bacillaene synthase trans-acting acyltransferase
D PPM_3218 pksM3; putative polyketide synthase pksM K13611 pksJ; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksJ/BaeJ
D PPM_3216 pksL; putative polyketide synthase pksL PKS K13613 pksM; bacillaene polyketide synthase PksM/BaeM
D PPM_3215 pksJ; putative polyketide synthase pksJ PKS K13614 pksN; bacillaene biosynthesis, polyketide synthase / nonribosomal peptide synthetase PksN/BaeN
D PPM_0588 M1-763; beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-]
D PPM_3222 fabF5; putative beta-ketoacyl-synthase K00646 pksF; malonyl-[acp] decarboxylase [EC:4.1.1.124]
D PPM_3223 acpK; Acyl carrier protein acpK ACP-II K15337 acpK; polyketide biosynthesis acyl carrier protein
D PPM_3221 pksG; hydroxymethylglutaryl-CoA synthase K15311 pksG; 3-carboxymethyl-3-hydroxy-acyl-[acp] synthase [EC:2.3.3.22]
D PPM_3220 pksH; polyketide biosynthesis enoyl-CoA hydratase K15312 pksH; 3-carboxymethyl-3-hydroxy-acyl-[acp] dehydratase [EC:4.2.1.181]
D PPM_3219 pksI; putative enoyl-CoA hydratase K15313 pksI; 4-carboxy-3-alkylbut-2-enoyl-[acp] decarboxylase [EC:4.1.1.125]
C 01006 Prenyltransferases [BR:ppo01006]
D PPM_3028 crtE; polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PPM_2941 hepS; heptaprenyl diphosphate synthase component 1 HEPPP synthase subunit 1; Spore germination protein C1 K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D PPM_2936 hepT; heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D PPM_1922 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PPM_2810 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PPM_2939 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D PPM_4125 cyoE; protohaem IX farnesyltransferase (haem O biosynthesis) K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ppo01007]
D PPM_2020 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PPM_4658 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PPM_4477 gltX3; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PPM_3162 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PPM_4129 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PPM_4475 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PPM_0120 argS1; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_1977 argS3; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_3058 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PPM_3339 ILS1; isoleucine-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PPM_3893 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PPM_3451 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PPM_0069 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PPM_3211 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_3843 aspS3; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_2890 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PPM_3844 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PPM_3397 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PPM_3396 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PPM_0084 serS1; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PPM_4879 serS3; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PPM_1926 proS1; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PPM_2211 proS3; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PPM_0545 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PPM_3824 alaS1; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PPM_4368 alaS3; alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PPM_1353 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PPM_1354 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PPM_2877 ykrV1; aminotransferase, classes I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D PPM_3640 ykrV3; aminotransferase, classes I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D PPM_3519 patA; aminotransferase, classes I and II K00841 patA; aminotransferase [EC:2.6.1.-]
D PPM_1365 alaT1; N-succinyldiaminopimelate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D PPM_1757 alaT3; N-succinyldiaminopimelate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D PPM_2924 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PPM_4547 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PPM_2269 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D PPM_0760 gsaB; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PPM_3896 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PPM_3869 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PPM_1392 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:ppo00199]
D PPM_3514 M1_3883; NADPH-ferrihemoprotein reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00194 Photosynthesis proteins [BR:ppo00194]
D PPM_4615 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PPM_4616 atpD; F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PPM_4617 atpG; F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PPM_4618 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PPM_4619 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PPM_4620 atpF; F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PPM_4621 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PPM_4622 atpB; F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PPM_4623 atps1; ATP synthase protein I K02116 atpI; ATP synthase protein I
D PPM_4624 M1_5060; hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ppo03000]
D PPM_p0197 nlaX; cytosine-specific methyltransferase NlaX K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0201 scrFIA; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0169 dcm1; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_3073 araC9; HTH-type transcriptional activator rhaR L-rhamnose operon transcriptional activator rhaR K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D PPM_0842 rhaS3; HTH-type transcriptional activator rhaS K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D PPM_0607 ybbB1; uncharacterized HTH-type transcriptional regulator ybbB K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D PPM_1192 ybbB3; uncharacterized HTH-type transcriptional regulator ybbB K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D PPM_1631 ydeE1; uncharacterized HTH-type transcriptional regulator ydeE K13653 K13653; AraC family transcriptional regulator
D PPM_p0082 rob; right origin-binding protein K13653 K13653; AraC family transcriptional regulator
D PPM_3161 ydeE3; right origin-binding protein K13653 K13653; AraC family transcriptional regulator
D PPM_4928 ydeE7; putative HTH-type transcriptional regulator YdeE K13653 K13653; AraC family transcriptional regulator
D PPM_3668 ydeE5; putative HTH-type transcriptional regulator ydeE K13653 K13653; AraC family transcriptional regulator
D PPM_4854 M1_5299; putative HTH-type transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D PPM_3645 adaA1; Methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D PPM_4154 adaA3; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D PPM_1714 gltC; uncharacterized HTH-type transcriptional regulator ywbI K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D PPM_0395 M1-560; lysr family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PPM_0122 rbcR1; transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D PPM_1601 cisL; putative RuBisCO transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D PPM_0381 yclA; uncharacterized HTH-type transcriptional regulator ywbI K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD
D PPM_1565 M1_1813; putative RuBisCO transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PPM_3249 M1_3609; putative RuBisCO transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PPM_4073 oxyR5; Hydrogen peroxide-inducible genes activator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PPM_0258 gltR1; HTH-type transcriptional regulator yofA K21959 ftsR; LysR family transcriptional regulator, cell division regulator
D PPM_1606 ytlI1; uncharacterized HTH-type transcriptional regulator ywbI K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
D PPM_4929 ytlI3; putative RuBisCO transcriptional regulator K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
D PPM_2162 yulB; glycerol-3-phosphate regulon repressor K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D PPM_1603 fruR1; lactose phosphotransferase system repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PPM_4609 spoIIID; Stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D PPM_2401 fcsR; glycerol-3-phosphate regulon repressor K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D PPM_1202 glcR; glycerol-3-phosphate regulon repressor K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D PPM_1803 tlyC; inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH; IMPD K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D PPM_2177 yqzB; inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH; IMPD K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D PPM_0332 purR1; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_0965 purR3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_1779 purR5; HTH-type transcriptional repressor purR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_2556 rbsR1; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_2299 msmR3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_2316 lacI1; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_2382 ccpA1; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_2443 lacI3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_4808 purR15; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_3916 purR11; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_3167 ccpA3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PPM_4788 kdgR5; LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D PPM_3721 kdgR3; LacI family transcriptional regulator, kdg operon repressor K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D PPM_0312 scrR; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D PPM_2379 fruR3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D PPM_4018 purR13; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D PPM_2055 exuR; putative HTH-type transcriptional repressor K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor
D PPM_1664 araR1; arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D PPM_5004 araR3; Arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D PPM_0629 treR; HTH-type transcriptional repressor yvoA K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D PPM_4882 ydhQ; HTH-type transcriptional regulator frlR K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D PPM_0242 gntR1; uncharacterized HTH-type transcriptional regulator ydhQ K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D PPM_0497 frlR1; HTH-type transcriptional regulator frlR K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D PPM_1539 frlR3; HTH-type transcriptional regulator frlR K03710 K03710; GntR family transcriptional regulator
D PPM_0708 yurK; mannosyl-D-glycerate transport/metabolism system repressor mngR K03710 K03710; GntR family transcriptional regulator
D PPM_0670 mocR; transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PPM_0985 ytrA; histidine utilization repressor K07979 ytrA; GntR family transcriptional regulator
D PPM_0457 gntR3; gluconate operon transcriptional repressor P28 protein K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D PPM_4980 gntR11; Gluconate operon transcriptional repressor P28 protein K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D PPM_0672 ydgC; uncharacterized HTH-type transcriptional regulator ydgC K09017 rutR; TetR/AcrR family transcriptional regulator
D PPM_1693 bscR1; HTH-type transcriptional repressor BscR K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D PPM_1753 dhaR1; HTH-type transcriptional repressor DhaR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PPM_2362 dhaR5; HTH-type transcriptional repressor dhaR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PPM_2214 dhaR3; HTH-type transcriptional repressor dhaR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PPM_4988 yezE; putative HTH-type transcriptional regulator yvdT K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PPM_4997 M1_5449; putative HTH-type transcriptional regulator ycfQ K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D PPM_2492 dhaR7; HTH-type transcriptional repressor dhaR K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D PPM_1033 lrpA; uncharacterized HTH-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PPM_4651 lrp3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PPM_3983 nreC7; Oxygen regulatory protein nreC Nitrogen regulation protein C K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D PPM_2126 marR9; multiple antibiotic resistance protein MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D PPM_0619 marR1; transcriptional regulator slyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D PPM_0700 ykoM1; uncharacterized HTH-type transcriptional regulator ykoM K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D PPM_1811 ykvE; HTH-type transcriptional regulator mhqR K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D PPM_4258 prsX; HTH-type transcriptional regulator prsX K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D PPM_1872 ohrR; HTH-type transcriptional regulator sarZ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PPM_0358 papX1; HTH-type transcriptional regulator papX K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PPM_2355 ydgJ; uncharacterized HTH-type transcriptional regulator YdgJ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PPM_2840 M1_3180; HTH-type transcriptional regulator sarZ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PPM_2802 glnR1; HTH-type transcriptional regulator glnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D PPM_1716 yhdQ; HTH-type transcriptional regulator hmrR Copper efflux regulator; Copper export regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D PPM_3105 yyaN; HTH-type transcriptional regulator hmrR Copper efflux regulator; Copper export regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D PPM_1812 metSY; methionine synthase K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PPM_0675 yfmP; HTH-type transcriptional regulator yfmP K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D PPM_3001 fur1; ferric uptake regulation protein Ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PPM_3060 fur3; ferric uptake regulation protein Ferric uptake regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D PPM_4204 perR1; Peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PPM_4724 perR3; Peroxide-responsive repressor perR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PPM_0740 kdgR1; pectin degradation repressor protein kdgR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D PPM_4936 fnr7; Fumarate and nitrate reduction regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PPM_3065 fnr3; anaerobic regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PPM_4845 M1_5290; Anaerobic regulatory protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PPM_1599 crp2; catabolite gene activator cAMP K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PPM_4643 fnr5; Fumarate nitrate reduction regulatory protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D PPM_3830 yrzC; HTH-type transcriptional regulator iscR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D PPM_2464 nsrR1; HTH-type transcriptional repressor NsrR K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
D PPM_3097 arsR7; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PPM_4284 cadC5; Cadmium efflux system accessory protein Cadmium resistance regulatory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D PPM_0811 yvbA; biofilm growth-associated repressor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D PPM_0625 ydcN1; uncharacterized HTH-type transcriptional regulator ydcN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D PPM_1429 puuR1; HTH-type transcriptional regulator PuuR K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D PPM_0641 padR1; negative transcription regulator padR K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D PPM_2824 padR5; negative transcription regulator padR K26741 ladR; PadR family transcriptional regulator, multidrug transcriptional repressor LadR
D PPM_4736 M1_5177; putative protein X K10947 K10947; PadR family transcriptional regulator
D PPM_3055 mntR; transcriptional regulator mntR Manganese transport regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D PPM_2904 birA; birA-like protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PPM_4893 oppA7; HTH-type transcriptional regulator sgrR K11925 sgrR; SgrR family transcriptional regulator
D PPM_1054 yvaO; HTH-type transcriptional regulator sinR K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D PPM_1180 yvbF; uncharacterized protein yuaC ORF2 K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D PPM_1008 yrhO3; uncharacterized protein yrhO K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PPM_0564 yrhO1; uncharacterized protein yrhO K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D PPM_0031 purR9; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D PPM_4977 M1_5428; hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D PPM_2898 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D PPM_2785 M1_3123; hypothetical protein K07729 K07729; putative transcriptional regulator
D PPM_3320 yqaF; putative HTH-type transcriptional regulator ydcN K07729 K07729; putative transcriptional regulator
D PPM_1197 ydcD; antitoxin EndoAI EndoA inhibitor K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D PPM_1609 arbG3; beta-glucoside operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D PPM_1265 arbG1; beta-glucoside operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D PPM_3932 arbG7; Beta-glucoside operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D PPM_3612 arbG5; Beta-glucoside operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D PPM_4157 arbG9; Beta-glucoside operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D PPM_3798 glcT; Cryptic beta-glucoside bgl operon antiterminator K03480 glcT; transcriptional antiterminator
D PPM_3789 mtlR; putative licABCH operon regulator K03483 mtlR; mannitol operon transcriptional activator
D PPM_4973 manR; putative licABCH operon regulator K02538 manR; mannose operon transcriptional activator
D PPM_4021 licR1; putative licABCH operon regulator K03491 licR; probable licABCH operon transcriptional regulator
D PPM_4163 licR3; putative licABCH operon regulator K03491 licR; probable licABCH operon transcriptional regulator
D PPM_0419 csoR; copper-sensing transcriptional repressor csoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PPM_0994 pucR; purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D PPM_0021 abrB3; transition state regulatory protein abrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D PPM_1394 abrB1; putative transition state regulator abh K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D PPM_4699 abrB7; putative transition state regulator abh K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D PPM_4731 abrB9; Transition state regulatory protein abrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D PPM_4740 abrB11; Transition state regulatory protein abrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D PPM_0040 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D PPM_2797 parB1; putative plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_5062 parB7; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_5064 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_4776 glpP; Glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D PPM_3024 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PPM_3435 hrcA; Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D PPM_3946 tenA; Phosphomethylpyrimidine kinase THI21 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D PPM_2608 tenI; regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D PPM_4487 ctsR; Transcriptional regulator ctsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D PPM_0169 cggR; central glycolytic gene regulator K05311 cggR; central glycolytic genes regulator
D PPM_4356 deoR; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D PPM_2943 mtrB; transcription attenuation protein mtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D PPM_3334 pyrR; uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PPM_3373 rsfA; Prespore-specific transcriptional regulator rsfA K06314 rsfA; prespore-specific regulator
D PPM_p0081 ylbO; uncharacterized protein ylbO K06314 rsfA; prespore-specific regulator
D PPM_1590 ytcG; transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D PPM_3365 mraZ; Protein mraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ppo03021]
D PPM_3149 xpB; tFIIH basal transcription factor complex helicase XPB subunit DNA excision repair protein ERCC-3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PPM_4768 uvrB3; DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PPM_0126 ysh1; endoribonuclease K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D PPM_4426 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PPM_4462 rpoB3; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PPM_4461 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PPM_0128 rpoE1; replicase polyprotein 1ab K03048 rpoE; DNA-directed RNA polymerase subunit delta
D PPM_3134 yloH; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PPM_2658 rpoD1; RNA polymerase sigma factor rpoD Sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
D PPM_3393 sigA; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D PPM_4412 sigW13; RNA polymerase sigma factor sigW Sigma-W factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_2888 sigW9; RNA polymerase sigma factor rpoD Sigma-42 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_4525 M1_4959; RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_2258 sigM; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_0518 sigW3; RNA polymerase sigma-H factor Sigma-30 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_2368 sigW7; RNA polymerase sigma factor sigW Sigma-W factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_p0279 sigW; RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_4992 sigW15; RNA polymerase sigma factor sigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_3446 sigW11; RNA polymerase sigma-E factor Sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PPM_4229 sigB; RNA polymerase sigma factor rpoD Sigma-A K03090 sigB; RNA polymerase sigma-B factor
D PPM_3347 sigG; RNA polymerase sigma factor rpoD Sigma-43 K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D PPM_3348 sigE3; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D PPM_2992 sigF; RNA polymerase sigma-F factor Stage II sporulation protein AC; Sporulation sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D PPM_3480 sigK; RNA polymerase sigma factor rpoD Sigma-42 K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D PPM_4471 sigH; RNA polymerase sporulation-specific sigma factor K27000 sigH; RNA polymerase sigma-H factor
D PPM_0441 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PPM_1912 sigD; RNA polymerase sigma factor rpoD Sigma-70 K02405 fliA; RNA polymerase sigma factor FliA
D PPM_1929 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D PPM_3032 nusB; nusB-like N utilization substance protein K03625 nusB; transcription antitermination protein NusB
D PPM_3225 nusG1; Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D PPM_4468 nusG3; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PPM_4235 rsbU; response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PPM_3606 yvfQ; putative hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D PPM_4231 M1_4647; Anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D PPM_4230 rsbW; anti-sigma b factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PPM_0068 greA1; transcription elongation factor greA Transcript cleavage factor greA K03624 greA; transcription elongation factor GreA
D PPM_2186 greA3; transcription elongation factor greA Transcript cleavage factor greA K03624 greA; transcription elongation factor GreA
D PPM_0135 rho; transcription termination factor rho ATP-dependent helicase rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ppo03019]
D PPM_0126 ysh1; endoribonuclease K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D PPM_1485 exoN1; exonuclease domain-containing protein 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
D PPM_3879 cafA; putative ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D PPM_1850 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PPM_1947 ykqC; ribonuclease J 1 RNase J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PPM_0711 M1-898; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PPM_1964 cnpD4; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PPM_0176 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PPM_1709 deaD1; DEAD-box ATP-dependent RNA helicase ydbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4674 deaD3; putative ATP-dependent RNA helicase DDX17 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4990 deaD5; DEAD-box ATP dependent DNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4058 M1_4464; DEAD-box ATP-dependent RNA helicase 42 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_1282 recQ; ATP-dependent DNA helicase-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PPM_0174 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PPM_1938 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PPM_0135 rho; transcription termination factor rho ATP-dependent helicase rho K03628 rho; transcription termination factor Rho
D PPM_1703 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PPM_3433 dnaK; Chaperone protein dnaK Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D PPM_1159 groEL; 60 kDa chaperonin Protein Cpn60; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PPM_2809 hfq; protein hfq K03666 hfq; host factor-I protein
D PPM_4091 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PPM_4572 csrA; Carbon storage regulator-like protein K03563 csrA; carbon storage regulator
D PPM_0162 yvcJ; UPF0042 protein K06958 rapZ; RNase adapter protein RapZ
D PPM_2021 hrpB; ATP-dependent RNA helicase hrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ppo03011]
D PPM_4431 hypothetical protein K02875 RP-L14e; large subunit ribosomal protein L14e
D PPM_2958 rpsA; 30S ribosomal S1-like protein K02945 RP-S1; small subunit ribosomal protein S1
D PPM_p0182 rpsA; small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PPM_1918 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PPM_4448 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PPM_3160 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PPM_4437 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PPM_5055 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PPM_4458 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PPM_4440 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PPM_4422 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PPM_4455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PPM_4427 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PPM_4459 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PPM_4428 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PPM_2351 rpsN1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PPM_4441 rpsN3; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D PPM_1937 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PPM_1856 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PPM_4445 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PPM_5053 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PPM_4450 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PPM_3443 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PPM_3411 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PPM_4466 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PPM_4451 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PPM_4454 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PPM_4453 rplD; 50S ribosomal protein L4 BL4 K02926 RP-L4; large subunit ribosomal protein L4
D PPM_4442 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PPM_4439 rplF; 50S ribosomal protein L6 BL10 K02933 RP-L6; large subunit ribosomal protein L6
D PPM_5041 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PPM_4465 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PPM_4467 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PPM_2219 M1_2510; hypothetical protein K02935 RP-L7; large subunit ribosomal protein L7/L12
D PPM_4464 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PPM_4423 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PPM_4444 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PPM_4435 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PPM_4447 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PPM_4425 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PPM_4438 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PPM_1860 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PPM_1335 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PPM_3878 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PPM_4449 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PPM_4452 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PPM_4443 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PPM_3876 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PPM_3122 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PPM_4446 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PPM_4436 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PPM_0137 rpmE1; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PPM_2130 rpmE3; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PPM_1842 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PPM_2129 rpmG1; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PPM_4470 rpmG3; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PPM_5071 rpmH; 39S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PPM_1334 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PPM_4429 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PPM_3783 ctc; 50S ribosomal protein L25 General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D PPM_4460 ybxF; 50S ribosomal protein L7Ae K07590 RP-L7A; large subunit ribosomal protein L7A
D PPM_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r042 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r028 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r039 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r035 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r032 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r034 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r041 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ppo03009]
D PPM_1850 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PPM_3399 era; era-like GTP-binding protein K03595 era; GTPase
D PPM_3874 obg; putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D PPM_1929 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D PPM_3032 nusB; nusB-like N utilization substance protein K03625 nusB; transcription antitermination protein NusB
D PPM_3225 nusG1; Transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D PPM_4468 nusG3; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D PPM_1730 rsuA3; 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D PPM_0026 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PPM_3129 sun; sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PPM_4463 ybxB; methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PPM_1836 ylbH; 23S rRNA (uracil-5-)-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PPM_3423 yqeU; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PPM_5065 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PPM_3364 mraW3; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PPM_0020 M1-172; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PPM_2811 pcmT; hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D PPM_3026 ftsJ; uncharacterized protein yqxC K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PPM_3979 M1_4377; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PPM_4473 rlmB; RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PPM_5021 M1_5476; UPF0247 protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PPM_2837 rumA1; SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PPM_3419 yccW; UPF0064 protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PPM_2681 ygdE; putative RNA 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D PPM_3128 rlmN1; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PPM_4927 M1_5376; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PPM_0838 yefA; RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PPM_2972 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PPM_1281 rluA; RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PPM_1369 yjbO; pseudouridine synthase, RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PPM_2838 rluD1; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PPM_3335 rluD3; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PPM_3895 yhcT; RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PPM_0092 rsuA1; pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PPM_2236 truA1; pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PPM_1150 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PPM_0097 natSF; gcn5-like n-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PPM_0500 yjcK3; ribosomal-protein-alanine N-acetyltransferase-like protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PPM_0524 yjcK5; acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PPM_0089 yjcK1; acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PPM_4660 ydaF; GCN5-related N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D PPM_1858 rimM; ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D PPM_3425 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PPM_0219 yxbC; uncharacterized protein yxbC K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D PPM_3879 cafA; putative ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D PPM_3822 res; putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PPM_4474 yazC; ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D PPM_1709 deaD1; DEAD-box ATP-dependent RNA helicase ydbR K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4674 deaD3; putative ATP-dependent RNA helicase DDX17 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4990 deaD5; DEAD-box ATP dependent DNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_4058 M1_4464; DEAD-box ATP-dependent RNA helicase 42 K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PPM_1987 yloQ1; conserved hypothetical protein TIGR00157 K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PPM_3125 yloQ3; putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PPM_2957 engA2; GTP-binding protein engA K03977 engA; GTPase
D PPM_1862 ylqF; GTP-binding protein engA K14540 rbgA; ribosome biogenesis GTPase A
D PPM_2804 hflX; tRNA modification GTPase mnmE K03665 hflX; GTPase
D PPM_3460 yqeH; GTP-binding protein engA K06948 yqeH; 30S ribosome assembly GTPase
D PPM_4634 ywlC3; putative protein YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PPM_3848 relA5; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PPM_1933 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PPM_1928 ylxS; UPF0090 protein K09748 rimP; ribosome maturation factor RimP
D PPM_0003 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D PPM_3455 yqeL; putative protein C7orf30 K09710 ybeB; ribosome-associated protein
D PPM_3401 yqfG; putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D PPM_3458 CAF1; CRS2-associated factor 1 K07574 yhbY; RNA-binding protein
D PPM_4555 yfiA; hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D PPM_4639 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D PPM_1841 M1_2111; hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ppo03016]
D PPM_2688 rnclZ; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PPM_2905 pcnB; tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PPM_0868 hint; metallophosphatase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PPM_2020 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PPM_1926 proS1; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PPM_2211 proS3; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PPM_3339 ILS1; isoleucine-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PPM_3451 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PPM_3058 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PPM_4658 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PPM_0120 argS1; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_1977 argS3; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_0069 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PPM_3211 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_3843 aspS3; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_3824 alaS1; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PPM_4368 alaS3; alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PPM_2890 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PPM_0545 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PPM_0084 serS1; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PPM_4879 serS3; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PPM_4475 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PPM_3893 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PPM_3844 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PPM_1353 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PPM_1354 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PPM_3162 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PPM_4129 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PPM_3847 dtD; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PPM_3412 hit; Histidine triad nucleotide-binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PPM_1329 ytmQ; tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PPM_4424 truA3; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PPM_1935 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PPM_2188 nifS; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3829 yrvO; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3382 nifZ; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_4634 ywlC3; putative protein YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PPM_2810 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PPM_5067 trmE; tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PPM_5066 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PPM_3497 M1_3866; putative tRNA(His) guanylyltransferase K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D PPM_5070 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PPM_3958 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PPM_1085 ytlP; UPF0097 protein in malA 3'region ORF3 K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D PPM_1463 M1_1704; putative RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D PPM_1507 kptA; putative RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D PPM_3397 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PPM_3396 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PPM_4477 gltX3; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PPM_2218 yjdI; uncharacterized protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PPM_0090 yaaJ; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PPM_0067 yacF; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PPM_1970 ymcB; (Dimethylallyl)adenosine tRNA methylthiotransferase miaB tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PPM_3422 M1_3789; hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PPM_1305 cmo5; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D PPM_1877 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PPM_1859 trmD; tRNA methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PPM_3392 yqfN; putative protein YqfN K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D PPM_1393 cspR; RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PPM_1083 rumA; putative methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D PPM_4180 spoU; RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D PPM_3831 trmU; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PPM_4102 yutM; putative iron-sulfur cluster insertion protein erpA K13628 iscA; iron-sulfur cluster assembly protein
D PPM_3862 queA; S-adenosylmethionine:tRNAribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PPM_0187 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PPM_1046 thiI1; queuosine biosynthesis protein queC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PPM_1045 ygcM; 6-pyruvoyl tetrahydrobiopterin synthase,putative K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PPM_0186 queE1; ribosomal RNA large subunit methyltransferase N K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PPM_1044 queE3; ribosomal RNA large subunit methyltransferase N K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PPM_1043 folE; GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PPM_0734 yhbA; putative electron transport protein yhbA K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PPM_0513 M1-685; 4Fe-4S ferredoxin, iron-sulfur binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PPM_3861 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PPM_0191 tgtC; queuine tRNA-ribosyltransferase tRNA-guanine transglycosylase; Guanine insertion enzyme K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D PPM_3381 thiI3; putative thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PPM_0052 mesJ; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PPM_1149 ydiC3; putative O-sialoglycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PPM_1151 gcP; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PPM_1148 ydiB3; UPF0079 ATP-binding protein ydiB K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PPM_3842 yrvM; Autophagy-related protein 7 Autophagy-related E1-like-activating enzyme ATG7 K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PPM_1840 ylbM; UPF0348 protein K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D PPM_0176 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PPM_1938 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PPM_0210 M1-367; PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ppo03012]
D PPM_1932 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PPM_1442 infC3; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PPM_1333 infC1; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PPM_1152 ydiF; uncharacterized ABC transporter ATP-binding protein ydiF K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PPM_4799 M1_5242; putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PPM_1919 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PPM_4456 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu
D PPM_4457 fusA3; elongation factor G K02355 fusA; elongation factor G
D PPM_4638 prfA; Peptide chain release factor 1 RF-1 K02835 prfA; peptide chain release factor 1
D PPM_1921 frr; ribosome-recycling factor RRF; Ribosome-releasing factor K02838 frr; ribosome recycling factor
D PPM_4637 hemK; methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PPM_0036 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PPM_4430 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PPM_3047 efp; elongation factor P EF-P K02356 efp; elongation factor P
D PPM_4553 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PPM_4183 prfC; Elongation factor G EF-G K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ppo03110]
D PPM_4484 clpC; ATP-dependent Clp protease ATP-binding subunit clpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PPM_3909 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PPM_1879 hslU; ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PPM_0345 htpG1; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPM_1650 htpG3; chaperone protein htpG Heat shock protein htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
D PPM_3433 dnaK; Chaperone protein dnaK Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D PPM_1159 groEL; 60 kDa chaperonin Protein Cpn60; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PPM_3432 dnaJ1; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D PPM_3773 dnaJ3; Chaperone protein dnaJ K05516 cbpA; curved DNA-binding protein
D PPM_0058 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D PPM_3434 grpE; Protein grpE HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D PPM_1158 groES2; 10 kDa chaperonin K04078 groES; chaperonin GroES
D PPM_4514 M1_4946; peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_5030 yyxA; putative serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_1386 htrA; peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D PPM_0054 ftsH3; cell-division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PPM_2893 ftsH5; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PPM_4622 atpB; F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PPM_0127 epr; extracellular serine protease K01342 aprE; subtilisin [EC:3.4.21.62]
D PPM_3387 apr; peptidase S8 and S53, subtilisin, kexin, sedolisin K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D PPM_3741 bprF; bacillopeptidase F K13276 bpr; bacillopeptidase F [EC:3.4.21.-]
D PPM_2049 ispA1; intracellular serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D PPM_0355 vpr; minor extracellular serine protease K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D PPM_1005 ppiB1; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PPM_2987 ppiB3; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PPM_0039 prsA1; peptidyl-prolyl cis-trans isomerase surA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D PPM_0059 prsA3; peptidyl-prolyl cis-trans isomerase surA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D PPM_2359 trxA3; thioredoxin-1 Trx-1; Thioredoxin-M K03671 TXN; thioredoxin
D PPM_4079 trxA7; Thioredoxin-1 Trx-1 K03671 TXN; thioredoxin
D PPM_2086 ytnI; YtnI-like protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:ppo04131]
D PPM_2935 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PPM_3799 yuaG; putative protein YuaG K07192 FLOT; flotillin
D PPM_0170 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PPM_0105 gpmA1; phosphoglycerate mutase family protein,putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4994 pgm3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4820 gpmA3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_1564 pykA3; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_0316 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_0345 htpG1; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPM_1650 htpG3; chaperone protein htpG Heat shock protein htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ppo04121]
D PPM_0180 M1-336; bTB/POZ domain-containing protein KCTD9 K21919 KCTD9; BTB/POZ domain-containing protein KCTD9
D PPM_0234 M1-392; uncharacterized protein in mobD 3'region K21919 KCTD9; BTB/POZ domain-containing protein KCTD9
C 03051 Proteasome [BR:ppo03051]
D PPM_0345 htpG1; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPM_1650 htpG3; chaperone protein htpG Heat shock protein htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ppo03032]
D PPM_0733 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PPM_p0197 nlaX; cytosine-specific methyltransferase NlaX K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0201 scrFIA; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0169 dcm1; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_0043 hupA; DNA-binding protein HU (DNA-binding protein II) K03530 hupB; DNA-binding protein HU-beta
D PPM_2945 hup; integration host factor subunit alpha IHF-alpha K03530 hupB; DNA-binding protein HU-beta
D PPM_0001 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D PPM_2662 dnaB1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PPM_3310 dnaB3; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PPM_5040 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PPM_3394 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PPM_4081 dnaB5; Replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D PPM_2790 dnaI1; chromosomal replication initiator protein dnaA K11144 dnaI; primosomal protein DnaI
D PPM_4080 dnaI3; Chromosomal replication initiator protein dnaA K11144 dnaI; primosomal protein DnaI
D PPM_5054 ssb; Single-stranded DNA-binding protein SSB K03111 ssb; single-strand DNA-binding protein
D PPM_p0185 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PPM_1559 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PPM_1927 polC3; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PPM_0002 dnaN1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_2789 dnaN3; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_p0204 pcnA; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_3444 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PPM_0016 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PPM_1719 polC1; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PPM_0138 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PPM_1863 rnh; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PPM_1584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PPM_4489 ligA3; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PPM_1371 ypcP; 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D PPM_p0011 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_3547 M1_3919; hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_0008 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PPM_0006 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PPM_2842 gyrA3; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PPM_2843 gyrB3; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PPM_1876 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PPM_0779 topB1; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D PPM_2591 topB3; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D PPM_p0073 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ppo03036]
D PPM_2414 M1_2722; activating signal cointegrator 1 K23398 TRIP4; activating signal cointegrator 1
D PPM_p0197 nlaX; cytosine-specific methyltransferase NlaX K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0201 scrFIA; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0169 dcm1; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_1485 exoN1; exonuclease domain-containing protein 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
D PPM_1850 rncS; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PPM_3799 yuaG; putative protein YuaG K07192 FLOT; flotillin
D PPM_0043 hupA; DNA-binding protein HU (DNA-binding protein II) K03530 hupB; DNA-binding protein HU-beta
D PPM_2945 hup; integration host factor subunit alpha IHF-alpha K03530 hupB; DNA-binding protein HU-beta
D PPM_3773 dnaJ3; Chaperone protein dnaJ K05516 cbpA; curved DNA-binding protein
D PPM_0001 dnaA; chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D PPM_1513 dps; stress-and starvation-induced gene controlled by sigma-B K04047 dps; starvation-inducible DNA-binding protein
D PPM_4743 dps2; starvation-inducible DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D PPM_2809 hfq; protein hfq K03666 hfq; host factor-I protein
D PPM_1033 lrpA; uncharacterized HTH-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PPM_4651 lrp3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PPM_1851 smc; chromosome partition protein smc K03529 smc; chromosome segregation protein
D PPM_2980 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D PPM_2979 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D PPM_3351 ftsA; Chaperone protein dnaK Heat shock protein 70 K03590 ftsA; cell division protein FtsA
D PPM_0047 divIC; septum formation initiator K13052 divIC; cell division protein DivIC
D PPM_4535 ftsE; Methionine import ATP-binding protein metN K09812 ftsE; cell division transport system ATP-binding protein
D PPM_1950 ftsK3; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PPM_1993 ftsK5; ftsk-like protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PPM_3363 M1_3728; hypothetical protein K03586 ftsL; cell division protein FtsL
D PPM_3352 ftsQ; ftsQ-like Cell division protein K03589 ftsQ; cell division protein FtsQ
D PPM_3152 ftsW1; cell division protein ftsW K03588 ftsW; cell division protein FtsW
D PPM_3356 ftsW3; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D PPM_4534 ftsX; Macrolide export ATP-binding/permease protein macB K09811 ftsX; cell division transport system permease protein
D PPM_3350 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D PPM_3635 zipA; zipA-like cell division protein K03528 zipA; cell division protein ZipA
D PPM_2858 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_2859 cwlB; N-acetylmuramoyl-L-alanine amidase CwlB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_4419 cwlD3; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_1742 cwlD1; putative N-acetylmuramoyl-L-alanine amidase yrvJ Flags: Precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PPM_3883 minC; putative septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D PPM_3882 minD; Septum site-determining protein minD Cell division inhibitor minD K03609 minD; septum site-determining protein MinD
D PPM_3340 divIVA; Septum site-determining protein divIVA Cell division initiation protein divIVA K04074 divIVA; cell division initiation protein
D PPM_3343 ylmF; Cell division protein sepF K09772 sepF; cell division inhibitor SepF
D PPM_3886 mreB; Chaperone protein dnaK Heat shock protein 70 K03569 mreB; rod shape-determining protein MreB and related proteins
D PPM_4608 mbl; Chaperone protein dnaK Heat shock protein 70 K03569 mreB; rod shape-determining protein MreB and related proteins
D PPM_3885 mreC; Rod shape-determining protein mreC K03570 mreC; rod shape-determining protein MreC
D PPM_3884 mreD; Rod shape-determining protein mreD K03571 mreD; rod shape-determining protein MreD
D PPM_4636 rodA; Cell division protein ftsW K05837 rodA; rod shape determining protein RodA
D PPM_0225 soj1; soj-like protein K03496 parA; chromosome partitioning protein
D PPM_5063 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D PPM_2797 parB1; putative plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_5062 parB7; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_5064 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_2842 gyrA3; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PPM_2843 gyrB3; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PPM_5066 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PPM_5065 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PPM_1877 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D PPM_2999 xerD5; tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D PPM_3574 xerD3; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D PPM_0042 yabN; mazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D PPM_4418 ybaL; mrp-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PPM_3905 ysxC; putative GTP-binding protein engB K03978 engB; GTP-binding protein
D PPM_0164 yvcL; conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ppo03400]
D PPM_3644 ogt3; methylated-DNA-protein-cysteineS-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PPM_3209 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PPM_0718 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PPM_2856 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PPM_3149 xpB; tFIIH basal transcription factor complex helicase XPB subunit DNA excision repair protein ERCC-3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PPM_4768 uvrB3; DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D PPM_1291 mutT1; mutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PPM_3326 mutT5; 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PPM_1756 M1_2020; RNA pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PPM_1973 rppH1; putative DNA hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PPM_2775 mutT3; RNA pyrophosphohydrolase (Di)nucleoside polyphosphate hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PPM_1941 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PPM_3645 adaA1; Methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D PPM_4154 adaA3; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D PPM_4153 adaB; methylated-DNA-protein-cysteineS-methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PPM_0992 ygjF; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D PPM_5010 M1_5464; DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PPM_4151 alkA; putative DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PPM_1585 mutM1; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PPM_2686 mutM3; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PPM_3913 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PPM_1238 nfo1; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PPM_2685 nfo3; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PPM_3724 dna5; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PPM_3852 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PPM_4489 ligA3; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PPM_1584 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PPM_4517 uvrA; UvrABC system protein A UvrA protein K03701 uvrA; excinuclease ABC subunit A
D PPM_4518 uvrB1; UvrABC system protein B Protein uvrB K03702 uvrB; excinuclease ABC subunit B
D PPM_4078 uvrC1; UvrABC system protein C Protein uvrC K03703 uvrC; excinuclease ABC subunit C
D PPM_0562 yjcD; ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_1786 yvgS; helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_3839 uvrD; UvrD/Rep helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_4490 pcrA3; DNA helicase II / ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PPM_4462 rpoB3; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PPM_4461 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PPM_4426 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PPM_0128 rpoE1; replicase polyprotein 1ab K03048 rpoE; DNA-directed RNA polymerase subunit delta
D PPM_3134 yloH; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PPM_0038 mfd; transcription-repair-coupling factor TRCF; ATP-dependent helicase mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PPM_2813 mutS3; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D PPM_1357 mutS2; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2
D PPM_2538 mutS1; DNA mismatch repair protein mutS K07456 mutS2; DNA mismatch repair protein MutS2
D PPM_2812 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D PPM_3030 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PPM_3029 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PPM_1559 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PPM_1927 polC3; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PPM_0002 dnaN1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_2789 dnaN3; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_p0204 pcnA; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PPM_3444 yqeN; putative DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PPM_0016 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PPM_1719 polC1; hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PPM_0138 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PPM_5054 ssb; Single-stranded DNA-binding protein SSB K03111 ssb; single-strand DNA-binding protein
D PPM_p0185 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PPM_p0011 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_3547 M1_3919; hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_1962 recA; protein recA Recombinase A K03553 recA; recombination protein RecA
D PPM_3865 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D PPM_3864 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PPM_2660 ruvC1; crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PPM_3866 ruvC3; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PPM_3132 priA; primosomal protein N' ATP-dependent helicase priA; Replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PPM_3415 sbcC; Nuclease sbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D PPM_3416 sbcD; Nuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D PPM_4483 radA; radA-like DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D PPM_0004 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D PPM_3119 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PPM_3398 recO; DNA repair protein recO Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D PPM_0140 recR; recombination protein recR K06187 recR; recombination protein RecR
D PPM_3023 recN; DNA repair protein recN Recombination protein N K03631 recN; DNA repair protein RecN (Recombination protein N)
D PPM_3417 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PPM_3418 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PPM_1140 ykoV; hypothetical protein K10979 ku; DNA end-binding protein Ku
D PPM_0359 lig; hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PPM_1132 ykoU; hypothetical protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D PPM_0008 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PPM_0006 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PPM_1876 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PPM_0043 hupA; DNA-binding protein HU (DNA-binding protein II) K03530 hupB; DNA-binding protein HU-beta
D PPM_2945 hup; integration host factor subunit alpha IHF-alpha K03530 hupB; DNA-binding protein HU-beta
D PPM_3312 recT3; Protein recT P33 K07455 recT; recombination protein RecT
D PPM_2664 recT1; protein recT P33 K07455 recT; recombination protein RecT
D PPM_1282 recQ; ATP-dependent DNA helicase-like protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PPM_1722 yqjH; DNA-damage-inducible protein P, putative K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PPM_3093 uvrX; UV-damage repair protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PPM_2695 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D PPM_1963 recX; regulatory protein recX K03565 recX; regulatory protein
D PPM_2112 dinG1; hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PPM_2899 dinG3; dinG-like putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PPM_0477 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PPM_1773 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PPM_0476 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PPM_1772 nrdF; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PPM_1934 mipP; putative manganese-dependent inorganic pyrophosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ppo03029]
D PPM_1932 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PPM_1442 infC3; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PPM_1333 infC1; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PPM_1919 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PPM_4456 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu
D PPM_4457 fusA3; elongation factor G K02355 fusA; elongation factor G
D PPM_3399 era; era-like GTP-binding protein K03595 era; GTPase
D PPM_3162 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PPM_3451 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PPM_3211 aspS1; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_3843 aspS3; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PPM_0120 argS1; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_1977 argS3; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PPM_4210 gatA5; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PPM_3488 gatA3; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PPM_4209 gatB; glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PPM_4211 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Asp/Glu-ADT subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PPM_p0214 y4fB; uncharacterized protein y4fB K01173 ENDOG; endonuclease G, mitochondrial
D PPM_5054 ssb; Single-stranded DNA-binding protein SSB K03111 ssb; single-strand DNA-binding protein
D PPM_p0185 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PPM_3433 dnaK; Chaperone protein dnaK Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D PPM_3434 grpE; Protein grpE HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D PPM_1159 groEL; 60 kDa chaperonin Protein Cpn60; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PPM_1158 groES2; 10 kDa chaperonin K04078 groES; chaperonin GroES
D PPM_3432 dnaJ1; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D PPM_2188 nifS; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3829 yrvO; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3382 nifZ; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_4418 ybaL; mrp-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PPM_4125 cyoE; protohaem IX farnesyltransferase (haem O biosynthesis) K02257 COX10; heme o synthase [EC:2.5.1.141]
D PPM_4113 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PPM_2192 yqjG; inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_5069 oxaA; Inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_0345 htpG1; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPM_1650 htpG3; chaperone protein htpG Heat shock protein htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ppo02000]
D PPM_1980 msbA7; lipid A export ATP-binding/permease protein MsbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2852 yknU; lipid A export ATP-binding/permease protein msbA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_1979 yheH; lipid A export ATP-binding/permease protein msbA K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2851 yknV; uncharacterized ABC transporter ATP-binding protein yknV K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0342 spaT; lipid A export ATP-binding/permease protein msbA K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D PPM_1425 msbA5; ABC transporter ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D PPM_3840 yvcC3; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_1078 yvcC1; lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_0971 yfiB3; lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2356 msbA1; lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0117 yfiB1; lipid A export ATP-binding/permease protein msbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2357 msbA2; lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0972 yfiC3; lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_0116 yfiC1; lipid A export ATP-binding/permease protein msbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PPM_2549 ywjA; lipid A export ATP-binding/permease protein msbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PPM_4398 pmxD; Lipid A export ATP-binding/permease protein msbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PPM_3924 msbA3; Lipid A export ATP-binding/permease protein msbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PPM_4297 cydD3; Lipid A export ATP-binding/permease protein msbA K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PPM_4298 cydC; Lipid A export ATP-binding/permease protein msbA K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PPM_3785 msbA9; Lipid A export ATP-binding/permease protein msbA K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PPM_2727 M1_3061; putative ABC transporter ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D PPM_1694 uup; putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PPM_4346 sbp; Sulfate-binding protein Sulfate starvation-induced protein 2 K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D PPM_4345 cysT5; putative sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D PPM_4344 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D PPM_1247 cysA; sulfate transport system ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D PPM_3626 modA3; Molybdate/tungstate-binding protein wtpA K02020 modA; molybdate transport system substrate-binding protein
D PPM_3500 modA1; Molybdate/tungstate-binding protein wtpA K02020 modA; molybdate transport system substrate-binding protein
D PPM_3625 cysT3; putative sulfate transport system permease protein cysT K02018 modB; molybdate transport system permease protein
D PPM_3499 cysT1; putative sulfate transport system permease protein cysT K02018 modB; molybdate transport system permease protein
D PPM_0124 ftpB; ferric transport system permease protein FbpB K02012 afuA; iron(III) transport system substrate-binding protein
D PPM_0125 ftpA; ferric transport system permease protein fbpB K02011 afuB; iron(III) transport system permease protein
D PPM_0123 phnT; ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D PPM_3520 potD1; Spermidine/putrescine-binding periplasmic protein 1 SPBP K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PPM_3521 potC1; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein
D PPM_3522 potB; Putrescine transport system permease protein potH K11071 potB; spermidine/putrescine transport system permease protein
D PPM_3523 potA7; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PPM_4749 potD3; Spermidine/putrescine-binding periplasmic protein SPBP K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D PPM_4746 potC3; Molybdate/tungstate transport system permease protein wtpB K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D PPM_4747 cysT7; putative sulfate transport system permease protein cysT K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D PPM_4745 potA11; Spermidine/putrescine import ATP-binding protein potA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D PPM_1178 M1_1402; glycine betaine-binding protein K02001 proW; glycine betaine/proline transport system permease protein
D PPM_1179 proV; glycine betaine/L-proline ABC transporter,ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PPM_2821 ytlA; ABC transporter, substrate-binding protein,putative K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PPM_0427 M1-596; ABC transporter, substrate-binding protein,putative K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PPM_2819 ytlD3; uncharacterized ABC transporter permease protein ytlD K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PPM_0425 ytlD1; uncharacterized ABC transporter permease protein ytlD K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D PPM_0424 M1-592; hypothetical ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PPM_2820 ytlC; spermidine/putrescine import ATP-binding protein potA K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D PPM_0144 msmX; sn-glycerol-3-phosphate import ATP-binding protein ugpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PPM_0529 msmE1; uncharacterized ABC transporter extracellular-binding protein yurO Flags: Precursor K25086 musE; maltose transport system substrate-binding protein
D PPM_4627 yurO7; putative ABC transporter extracellular-binding protein YurO K25086 musE; maltose transport system substrate-binding protein
D PPM_4393 amyE; putative ABC transporter extracellular-binding protein K25086 musE; maltose transport system substrate-binding protein
D PPM_0527 amyD1; putative starch degradation products transport system permease protein amyD K25087 musF; maltose transport system permease protein
D PPM_4629 amyD5; putative starch degradation products transport system permease protein amyD K25087 musF; maltose transport system permease protein
D PPM_4392 amyD3; putative starch degradation products transport system permease protein amyD K25087 musF; maltose transport system permease protein
D PPM_4391 amyC5; putative starch degradation products transport system permease protein amyC K25088 musG; maltose transport system permease protein
D PPM_4628 yesQ5; putative ABC transporter permease protein YesQ K25088 musG; maltose transport system permease protein
D PPM_0528 amyC1; putative starch degradation products transport system permease protein amyC K25088 musG; maltose transport system permease protein
D PPM_0663 msmE3; putative binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4795 msmE7; Multiple sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4866 ugpB5; sn-glycerol-3-phosphate-binding periplasmic protein ugpB K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_3715 yurO5; putative ABC transporter extracellular-binding protein yurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_1791 msmE5; multiple sugar-binding protein Flags: Precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_2302 yurO3; uncharacterized ABC transporter extracellular-binding protein yurO Flags: Precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_0376 yurO1; uncharacterized ABC transporter extracellular-binding protein yurO Flags: Precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4805 M1_5249; putative ABC transporter extracellular-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D PPM_4794 msmF3; sn-glycerol-3-phosphate transport system permease protein ugpA K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_4869 amyD7; putative starch degradation products transport system permease protein amyD K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_3714 ugpA5; sn-glycerol-3-phosphate transport system permease protein UgpA K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_0377 lacF7; putative ABC transporter permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_2303 yurN1; sn-glycerol-3-phosphate transport system permease protein ugpA K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_0664 msmF1; putative ABC transporter permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_4804 yurN3; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D PPM_4793 msmG; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_4870 ugpE2; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_3713 yurM7; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_0378 yurM3; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_2304 yurM5; sn-glycerol-3-phosphate transport system permease protein ugpE K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_0665 amyC3; L-arabinose transport system permease protein araQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_4803 malG; Maltose transport system permease protein MalG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D PPM_3920 lacE3; Lactose-binding protein LBP K10240 cebE; cellobiose transport system substrate-binding protein
D PPM_3921 cebF; putative ABC transporter permease protein yurN K10241 cebF; cellobiose transport system permease protein
D PPM_3922 araQ5; sn-glycerol-3-phosphate transport system permease protein ugpE K10242 cebG; cellobiose transport system permease protein
D PPM_0362 srrA1; ABC-type sugar transport system, periplasmic component K17244 chiE; putative chitobiose transport system substrate-binding protein
D PPM_0363 lacF5; putative ABC transporter permease protein K17245 chiF; putative chitobiose transport system permease protein
D PPM_0364 yurM1; putative ABC transporter permease protein yurM K17246 chiG; putative chitobiose transport system permease protein
D PPM_0268 lacE1; lactose-binding protein LBP; Flags: Precursor K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D PPM_0267 lacF1; lactose transport system permease protein lacF K10189 lacF; lactose/L-arabinose transport system permease protein
D PPM_0266 araQ1; maltose transport system permease protein malG K10190 lacG; lactose/L-arabinose transport system permease protein
D PPM_2457 ytcQ5; lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_3201 ytcQ7; uncharacterized protein in butB 5'region K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_3472 lplA2; Lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_4293 lplA7; sn-glycerol-3-phosphate-binding periplasmic protein ugpB K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_1778 lplA1; lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_0556 lplA3; lipoprotein lplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_2064 ytcQ3; lipoprotein lplA Flags: Precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_4833 M1_5278; Multiple sugar-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_2440 lplA5; lipoprotein lplA K17318 lplA; putative aldouronate transport system substrate-binding protein
D PPM_2456 lplB9; sn-glycerol-3-phosphate transport system permease protein ugpA K17319 lplB; putative aldouronate transport system permease protein
D PPM_3474 ypdA1; sn-glycerol-3-phosphate transport system permease protein ugpA K17319 lplB; putative aldouronate transport system permease protein
D PPM_2062 lplB5; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_2442 lplB7; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_3200 lplB11; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_0554 lplB1; protein lplB K17319 lplB; putative aldouronate transport system permease protein
D PPM_4295 lplB15; L-arabinose transport system permease protein araP K17319 lplB; putative aldouronate transport system permease protein
D PPM_4832 lplB17; putative ABC transporter permease protein yurN K17319 lplB; putative aldouronate transport system permease protein
D PPM_2455 lplC9; protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_0555 lplC1; sn-glycerol-3-phosphate transport system permease protein ugpE K17320 lplC; putative aldouronate transport system permease protein
D PPM_4294 lplC11; Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_2063 lplC5; putative ABC transporter permease protein K17320 lplC; putative aldouronate transport system permease protein
D PPM_3199 ytcP1; protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_3473 ypcH; Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_4831 lplC13; Protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_2441 lplC7; protein lplC K17320 lplC; putative aldouronate transport system permease protein
D PPM_1028 chvE; multiple sugar-binding periplasmic receptor chvE Flags: Precursor K10546 chvE; putative multiple sugar transport system substrate-binding protein
D PPM_1030 araH; xylose transport system permease protein xylH K10547 gguB; putative multiple sugar transport system permease protein
D PPM_1029 araG; ribose ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PPM_1021 purR4; HTH-type transcriptional repressor purR K10439 rbsB; ribose transport system substrate-binding protein
D PPM_2551 rbsB3; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K10439 rbsB; ribose transport system substrate-binding protein
D PPM_2552 rbsC1; ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein
D PPM_2553 rbsA1; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PPM_0968 ytcQ1; lipoprotein lplA Flags: Precursor K25670 fusA; fructooligosaccharide transport system substrate-binding protein
D PPM_0966 lplB3; protein lplB K25671 fusC; fructooligosaccharide transport system permease protein
D PPM_0967 lplC3; protein lplC K25672 fusB; fructooligosaccharide transport system permease protein
D PPM_1174 upgB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PPM_1172 ugpA1; sn-glycerol-3-phosphate transport system permease protein ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PPM_1173 ugpE1; sn-glycerol-3-phosphate transport system permease protein ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PPM_0814 araN; putative arabinose-binding protein K17234 araN; arabinooligosaccharide transport system substrate-binding protein
D PPM_0815 araP; L-arabinose transport system permease protein araP K17235 araP; arabinooligosaccharide transport system permease protein
D PPM_0816 araQ3; L-arabinose transport system permease protein araQ K17236 araQ; arabinooligosaccharide transport system permease protein
D PPM_1761 mmbP; maltose-binding periplasmic protein MMBP K25062 abnE; arabinooligosaccharide transport system substrate-binding protein
D PPM_1762 ugpA3; sn-glycerol-3-phosphate transport system permease protein ugpA K25063 abnF; arabinooligosaccharide transport system permease protein
D PPM_1763 ugpE3; sn-glycerol-3-phosphate transport system permease protein UgpE K25064 abnJ; arabinooligosaccharide transport system permease protein
D PPM_3254 ytcQ9; Lipoprotein lplA K25673 ytcQ; polygalacturonan/rhamnogalacturonan transport system substrate-binding protein
D PPM_3256 lplB13; Protein lplB K25674 yteP; polygalacturonan/rhamnogalacturonan transport system permease protein
D PPM_3257 ytcP3; Protein lplC K25675 ytcP; polygalacturonan/rhamnogalacturonan transport system permease protein
D PPM_0753 yesO; sn-glycerol-3-phosphate-binding periplasmic protein ugpB Flags: Precursor K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D PPM_0754 yesP; maltose transport system permease protein malF K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D PPM_0755 yesQ3; putative ABC transporter permease protein yesQ K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D PPM_1336 yufN; basic membrane protein A1 Immunodominant antigen P39; Flags: Precursor K07335 bmpA; basic membrane protein A and related proteins
D PPM_3513 M1_3882; Basic membrane protein A2 K07335 bmpA; basic membrane protein A and related proteins
D PPM_1338 yufP; uncharacterized protein K23535 nupB; general nucleoside transport system permease protein
D PPM_1339 yufQ; uncharacterized protein K23536 nupC; general nucleoside transport system permease protein
D PPM_1337 M1_1571; ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PPM_4852 yjkA; UPF0014 inner membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D PPM_4851 yjkB; putative ABC transport system ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D PPM_0302 ugpB1; sn-glycerol-3-phosphate-binding periplasmic protein ugpB Flags: Precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PPM_4147 ugpB3; sn-glycerol-3-phosphate-binding periplasmic protein ugpB K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PPM_0336 malE; sn-glycerol-3-phosphate-binding periplasmic protein ugpB Flags: Precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PPM_0303 M1-465; sn-glycerol-3-phosphate transport system permease protein ugpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D PPM_0337 lacF3; sn-glycerol-3-phosphate transport system permease protein ugpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D PPM_4146 ugpA7; sn-glycerol-3-phosphate transport system permease protein UgpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D PPM_0304 yesQ1; putative ABC transporter permease protein yesQ K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PPM_0338 lacG; sn-glycerol-3-phosphate transport system permease protein ugpE K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PPM_4145 yurM9; putative ABC transporter permease protein YurM K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PPM_2948 rbsB5; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D PPM_2946 rbsC3; Autoinducer 2 import system permease protein lsrD AI-2 import system permease protein lsrD K02057 ABC.SS.P; simple sugar transport system permease protein
D PPM_2947 rbsA3; ABC transporter protein, ATP binding component K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PPM_1566 pstS; phosphate-binding protein pstS PBP; Flags: Precursor K02040 pstS; phosphate transport system substrate-binding protein
D PPM_1567 pstC; phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D PPM_1568 pstA; phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D PPM_1569 pstB3; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PPM_1582 pstB5; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PPM_4339 phnD; Phosphonates-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D PPM_4341 phnE; putative phosphonates transport system permease protein phnE K02042 phnE; phosphonate transport system permease protein
D PPM_4342 ptxC; Phosphite transport system permease protein ptxC K02042 phnE; phosphonate transport system permease protein
D PPM_2587 phnC1; methionine import ATP-binding protein metN K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PPM_4340 phnC3; Spermidine/putrescine import ATP-binding protein potA K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D PPM_0831 glnP5; membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor K10036 glnH; glutamine transport system substrate-binding protein
D PPM_0832 glnQ5; putative ABC transporter (ATP-binding protein) K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0398 glnH; glutamine-binding protein GlnBP; Flags: Precursor K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D PPM_0396 glnP1; inner membrane amino-acid ABC transporter permease protein yecS K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PPM_0397 glnP3; L-cystine transport system permease protein tcyB K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PPM_0399 glnQ1; amino acid ABC transporter, ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0799 fliY1; membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_3750 fliY5; putative amino-acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_4901 tcyJ; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_0800 yecS; L-cystine transport system permease protein tcyB K10009 tcyB; L-cystine transport system permease protein
D PPM_3749 tcyB; L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein
D PPM_4900 tcyL; Inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D PPM_3748 yckI; amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0801 glnQ3; amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_4899 M1_5347; Phosphate import ATP-binding protein pstB K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_2090 ytmJ; L-cystine-binding protein tcyK Flags: Precursor K16957 tcyK; L-cystine transport system substrate-binding protein
D PPM_2091 ytmL; histidine transport system permease protein hisM K16958 tcyL; L-cystine transport system permease protein
D PPM_2092 occM3; Octopine transport system permease protein occM K16959 tcyM; L-cystine transport system permease protein
D PPM_2093 hisP; amino acid ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_2578 arpJ; inner membrane amino-acid ABC transporter permease protein yecS K17077 artQ; arginine/lysine/histidine transport system permease protein
D PPM_2577 glnQ9; amino acid ABC transporter (ATP-binding protein) K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0893 metQ3; Outer membrane lipoprotein 1 K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_0549 metQ1; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_4108 metQ5; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_3641 sfbA; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D PPM_0436 metI; putative D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D PPM_0892 metI1; putative D-methionine transport system permease protein K02072 metI; D-methionine transport system permease protein
D PPM_4109 yaeE; putative D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D PPM_0435 metN5; methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D PPM_0891 metN1; methionine import ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PPM_4110 abc; Methionine import ATP-binding protein metN K02071 metN; D-methionine transport system ATP-binding protein
D PPM_4690 acrB3; Membrane-bound lytic murein transglycosylase F K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PPM_0939 mtgF; membrane-bound lytic murein transglycosylase F K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PPM_0940 occM1; Octopine transport system permease protein occM K02029 ABC.PA.P; polar amino acid transport system permease protein
D PPM_4692 glnP7; Inner membrane amino-acid ABC transporter permease protein yecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D PPM_4693 glnP9; polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D PPM_0941 glnQ7; amino acid ABC transporter (ATP-binding protein) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PPM_4691 glnQ11; putative glutamine transport system ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PPM_0936 oppA3; dipeptide-binding protein dppE Flags: Precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3371 dppE; Periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PPM_3370 oppB7; Dipeptide transport system permease protein dppB K15581 oppB; oligopeptide transport system permease protein
D PPM_0938 oppB3; oligopeptide transport system permease protein oppB Stage 0 sporulation protein KB K15581 oppB; oligopeptide transport system permease protein
D PPM_3369 oppC7; Glutathione transport system permease protein gsiD K15582 oppC; oligopeptide transport system permease protein
D PPM_0937 dppC1; dipeptide transport system permease protein dppC K15582 oppC; oligopeptide transport system permease protein
D PPM_3732 oppD5; Oligopeptide transport ATP-binding protein oppD Stage 0 sporulation protein KD K15583 oppD; oligopeptide transport system ATP-binding protein
D PPM_3368 oppF5; Phosphate import ATP-binding protein pstB K10823 oppF; oligopeptide transport system ATP-binding protein
D PPM_4906 nikA; peptide/nickel transport system substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D PPM_4905 nikB3; peptide/nickel transport system permease protein K15585 nikB; nickel transport system permease protein
D PPM_4904 nikC1; peptide/nickel transport system permease protein K15586 nikC; nickel transport system permease protein
D PPM_4903 nikD; peptide/nickel transport system ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PPM_4902 nikE; peptide/nickel transport system ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D PPM_0394 oppA1; oligopeptide-binding protein oppA Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_2101 oppA5; periplasmic oligopeptide-binding protein Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_2494 M1_2811; periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_1074 dppA; periplasmic dipeptide transport protein Dipeptide-binding protein; DBP; Flags: Precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_5052 dbp; Periplasmic dipeptide transport protein Dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_4911 M1_5359; Periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PPM_0392 oppB1; dipeptide transport system permease protein dppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_2102 oppB5; inner membrane ABC transporter permease protein yejB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_2495 nikB1; nickel transport system permease protein nikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_5051 oppB9; Oligopeptide transport system permease protein appB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_1075 dppB; putative D,D-dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PPM_0393 oppC1; glutathione transport system permease protein gsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_2103 oppC5; oligopeptide transport system permease protein oppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_2496 dppC3; dipeptide transport system permease protein dppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_5050 oppC9; Glutathione transport system permease protein gsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_1076 oppC3; glutathione transport system permease protein gsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PPM_4908 oppD7; Sulfate/thiosulfate import ATP-binding protein cysA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_5049 oppD9; Phosphate import ATP-binding protein pstB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_2104 oppD3; oligopeptide transport ATP-binding protein oppD Stage 0 sporulation protein KD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_0390 oppD1; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_2497 pstB7; phosphate import ATP-binding protein pstB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PPM_0391 oppF1; methionine import ATP-binding protein metN K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PPM_2105 oppF3; dipeptide transport ATP-binding protein dppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PPM_5048 oppF9; Dipeptide transport ATP-binding protein dppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PPM_0805 cbrA1; achromobactin-binding periplasmic protein Flags: Precursor K23181 fecB; ferric citrate transport system substrate-binding protein
D PPM_0803 yfmE; Vitamin B12 import system permease protein btuC K23182 fecD; ferric citrate transport system permease protein
D PPM_0804 yfmD; Vitamin B12 import system permease protein btuC K23183 fecC; ferric citrate transport system permease protein
D PPM_3050 fhuD7; iron(III) dicitrate-binding periplasmic protein Flags: Precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PPM_1443 cbrA5; achromobactin-binding periplasmic protein Flags: Precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D PPM_1444 fhuB5; ferrichrome transport system permease protein fhuB Ferrichrome uptake protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D PPM_3658 fhuD9; Ferrichrome-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D PPM_2550 yxeB11; ferrichrome-binding protein Flags: Precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D PPM_2548 yxeB9; Vitamin B12-binding protein Flags: Precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D PPM_2229 fhuD3; ferrichrome-binding protein Flags: Precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D PPM_0856 yxeB3; putative ABC transporter-binding protein yxeB K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D PPM_0821 cbrA3; achromobactin-binding periplasmic protein Flags: Precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D PPM_2230 fhuB7; ferrichrome transport system permease protein fhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D PPM_2546 fhuB9; iron-uptake system permease protein feuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D PPM_0819 fhuB3; ferrichrome transport system permease protein fhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D PPM_2545 fhuG5; Vitamin B12 import system permease protein btuC K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D PPM_0820 fhuG1; ferrichrome transport system permease protein fhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D PPM_2231 fhuG3; Vitamin B12 import system permease protein btuC K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D PPM_4669 fhuC5; iron complex transport system ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D PPM_4246 fhuD1; Vitamin B12-binding protein K25113 htsA; heme transport system substrate-binding protein
D PPM_4245 fhuB11; Vitamin B12 import system permease protein btuC K25114 htsB; heme transport system permease protein
D PPM_4244 fhuC1; iron compound ABC transporter, ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D PPM_4250 surfB; Iron-regulated surface determinant protein B K25118 isdC; iron-regulated surface determinant protein C
D PPM_4314 yclQ; putative ABC transporter solute-binding protein yclQ K25282 yclQ; iron-siderophore transport system substrate-binding protein
D PPM_4316 yclO; Vitamin B12 import system permease protein btuC K25283 yclO; iron-siderophore transport system permease protein
D PPM_4317 yclN; Vitamin B12 import system permease protein btuC K25284 yclN; iron-siderophore transport system permease protein
D PPM_4315 yclP; ferrichrome transport system ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D PPM_3557 M1_3931; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_4251 fhuD11; Vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_0606 yxeB1; ferrichrome-binding protein Flags: Precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_1596 yxeB7; putative ABC transporter-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_1297 feuA; iron-uptake system-binding protein Flags: Precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_2139 hmuT; Vitamin B12-binding protein Flags: Precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_3555 yfiY; putative HTH-type transcriptional regulator ybbB K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_1193 yxeB5; ferrichrome-binding protein Flags: Precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PPM_4252 fhuG7; Vitamin B12 import system permease protein btuC K02015 ABC.FEV.P; iron complex transport system permease protein
D PPM_0300 fhuB1; ferrichrome transport system permease protein FhuB K02015 ABC.FEV.P; iron complex transport system permease protein
D PPM_1298 fecD3; iron-uptake system permease protein feuB K02015 ABC.FEV.P; iron complex transport system permease protein
D PPM_1299 feuC; iron-uptake system permease protein feuC K02015 ABC.FEV.P; iron complex transport system permease protein
D PPM_2137 fecD5; Vitamin B12 import system permease protein btuC K02015 ABC.FEV.P; iron complex transport system permease protein
D PPM_2138 fecE; iron complex transport system ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PPM_2205 ylmA1; ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PPM_2682 ylmA3; ABC transporter (ATP-binding protein) K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PPM_4253 fhuC3; iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PPM_1256 yvrC; Vitamin B12-binding protein Flags: Precursor K25034 btuF; cobalamin transport system substrate-binding protein
D PPM_1257 fecD1; putative ABC transporter permease protein K25027 btuC; cobalamin transport system permease protein
D PPM_1258 fepC; ATP-binding component of ferric enterobactin transport K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PPM_2142 psaA3; manganese ABC transporter substrate-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D PPM_2141 adcB; manganese transport system membrane protein mntB K09816 znuB; zinc transport system permease protein
D PPM_2140 adcC; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D PPM_1221 psaA1; manganese ABC transporter substrate-binding lipoprotein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PPM_1223 troC; manganese transport system membrane protein mntC K11708 troC; manganese/zinc/iron transport system permease protein
D PPM_1224 mntD; manganese transport system membrane protein mntD K11709 troD; manganese/zinc/iron transport system permease protein
D PPM_1222 mntA; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PPM_0890 ykoC; putative HMP/thiamine permease protein ykoC K16785 ecfT; energy-coupling factor transport system permease protein
D PPM_0693 cbiQ; putative HMP/thiamine permease protein ykoC K16785 ecfT; energy-coupling factor transport system permease protein
D PPM_0889 M1-1085; putative ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PPM_0694 ykoE1; putative HMP/thiamine permease protein ykoE K16925 ykoE; energy-coupling factor transport system permease protein
D PPM_0888 ykoE3; putative HMP/thiamine permease protein ykoE K16925 ykoE; energy-coupling factor transport system permease protein
D PPM_4507 rfbB; putative ribose/galactose/methyl galactoside import ATP-binding protein 1 K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D PPM_4508 rfbA5; O-antigen export system permease protein rfbA K09692 tagG; teichoic acid transport system permease protein
D PPM_0450 bcrA1; spermidine/putrescine import ATP-binding protein potA K20459 nukF; lantibiotic transport system ATP-binding protein
D PPM_1418 ccmA3; ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D PPM_0451 bcrB1; bacitracin transport permease protein BCRB K20460 nukE; lantibiotic transport system permease protein
D PPM_1419 M1_1656; hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D PPM_0452 mrsE1; hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D PPM_1420 mrsE3; hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D PPM_2485 M1_2801; antibiotic transport system permease protein K20491 nisE; lantibiotic transport system permease protein
D PPM_2486 spaG; antibiotic transport system permease protein K20492 nisG; lantibiotic transport system permease protein
D PPM_2484 spaF; spermidine/putrescine import ATP-binding protein potA K20490 nisF; lantibiotic transport system ATP-binding protein
D PPM_4009 gldF; putative ABC-2 type transport system permease protein K25151 gldF; gliding motility-associated transport system permease protein
D PPM_4010 gldA7; putative ABC-2 type transport system ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D PPM_4008 gldG; hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D PPM_2081 PDR1; Pleiotropic drug resistance protein 1 NtPDR1 K25140 drrB; daunorubicin/doxorubicin transport system permease protein
D PPM_2080 drrA3; Daunorubicin resistance ABC transporter ATP-binding subunit K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein
D PPM_p0040 potC1; ABC-2 type transport system permease protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D PPM_p0041 potB1; putative pleiotropic drug resistance protein 7 K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D PPM_p0042 potA1; spermidine/putrescine import ATP-binding protein potA K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D PPM_4862 bcrB7; Bacitracin transport permease protein BCRB K19310 bcrB; bacitracin transport system permease protein
D PPM_4863 M1_5311; antibiotic transport system permease protein K19310 bcrB; bacitracin transport system permease protein
D PPM_4864 potA3; Spermidine/putrescine import ATP-binding protein potA K19309 bcrA; bacitracin transport system ATP-binding protein
D PPM_4957 bceB; Bacitracin export permease protein bceB K11632 bceB; bacitracin transport system permease protein
D PPM_4956 bceA; Bacitracin export ATP-binding protein bceA K11631 bceA; bacitracin transport system ATP-binding protein
D PPM_4174 yxdM; ABC transporter permease protein yxdM K11636 yxdM; putative ABC transport system permease protein
D PPM_4175 potA9; Spermidine/putrescine import ATP-binding protein potA K11635 yxdL; putative ABC transport system ATP-binding protein
D PPM_0987 M1_1190; hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D PPM_0986 potA5; spermidine/putrescine import ATP-binding protein potA K16921 ytrB; acetoin utilization transport system ATP-binding protein
D PPM_4534 ftsX; Macrolide export ATP-binding/permease protein macB K09811 ftsX; cell division transport system permease protein
D PPM_4535 ftsE; Methionine import ATP-binding protein metN K09812 ftsE; cell division transport system ATP-binding protein
D PPM_3991 M1_4389; hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D PPM_0764 M1-957; ABC transporter, permease protein, putative K25154 evrC; viologen exporter family transport system permease protein
D PPM_0763 M1-956; ABC transporter, permease protein, putative K25155 evrB; viologen exporter family transport system permease protein
D PPM_3992 M1_4390; hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D PPM_3993 M1_4391; ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D PPM_0762 drrA1; spermidine/putrescine import ATP-binding protein potA K25156 evrA; viologen exporter family transport system ATP-binding protein
D PPM_4056 ecsB; Protein ecsB K25157 ecsB; ABC-2 type transport system permease protein
D PPM_4057 ecsA; Spermidine/putrescine import ATP-binding protein potA K25158 ecsA; ABC-2 type transport system ATP-binding protein
D PPM_0328 M1-491; hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_1177 yhiH1; uncharacterized ABC transporter ATP-binding protein yhiH K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_4083 yhiH3; putative ABC transporter ATP-binding protein yhiH K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_2844 bcrB5; uncharacterized protein yhcI K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_0585 yhaP; uncharacterized protein yhaP K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_0919 yhcI; uncharacterized protein yhcI K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_1126 bcrB3; uncharacterized protein yhcI K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_4796 M1_5239; hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_4797 M1_5240; ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PPM_1185 bcrA5; spermidine/putrescine import ATP-binding protein potA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_1125 bcrA3; spermidine/putrescine import ATP-binding protein potA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_4265 pstB9; Phosphate import ATP-binding protein pstB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_0327 potA1; spermidine/putrescine import ATP-binding protein potA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_0583 M1-758; ABC transporter like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_0584 yhaQ; methionine import ATP-binding protein metN 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_0920 yhcH; spermidine/putrescine import ATP-binding protein potA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_2845 bcrA7; spermidine/putrescine import ATP-binding protein potA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_0339 pstB1; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_4798 pstB13; Phosphate import ATP-binding protein PstB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PPM_2176 macB1; macrolide export ATP-binding/permease protein macB K02004 ABC.CD.P; putative ABC transport system permease protein
D PPM_4321 macB2; Macrolide export ATP-binding/permease protein macB K02004 ABC.CD.P; putative ABC transport system permease protein
D PPM_4324 macB3; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D PPM_4170 macB5; Macrolide export ATP-binding/permease protein macB K02004 ABC.CD.P; putative ABC transport system permease protein
D PPM_2175 M1_2463; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PPM_p0087 metN4; methionine import ATP-binding protein metN K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PPM_4320 metN2; Methionine import ATP-binding protein metN K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PPM_4323 metN3; hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PPM_4834 yvrO; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PPM_4171 metN7; Methionine import ATP-binding protein MetN K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PPM_1514 yurY; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PPM_4199 sufC; Phosphate import ATP-binding protein pstB K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PPM_1213 M1_1438; major facilitator superfamily MFS-1 K08155 SLC18A1_2; MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2
D PPM_0903 mdtK; multidrug resistance protein mdtK K18908 mepA; MATE family, multidrug efflux pump
D PPM_1705 norM; putative multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump
D PPM_2048 yisQ; multidrug resistance protein mdtK Multidrug-efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PPM_4789 mdtK1; Multidrug resistance protein MdtK K26937 dinF; MATE family, multidrug efflux pump
D PPM_0256 yeeO; multidrug resistance protein mdtK Multidrug-efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PPM_2499 dinF; multidrug resistance protein mdtK Multidrug-efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PPM_1701 matE; multidrug resistance protein mdtK Multidrug-efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PPM_0976 xylE; arabinose-proton symporter Arabinose transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D PPM_1793 lacY; lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D PPM_2380 rafB; raffinose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D PPM_1829 glcP1; sodium-dependent glucose transporter 1 K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D PPM_2328 glcP3; sodium-dependent glucose transporter 1 K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D PPM_4376 M1_4799; Sugar efflux transporter B K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D PPM_3778 yhjX; Inner membrane protein YhjX K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PPM_0872 ydiN3; inner membrane transport protein ydiN K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D PPM_0870 ydiN1; inner membrane transport protein ydiM K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D PPM_2405 yycB1; uncharacterized transporter yycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PPM_4783 yycB3; putative transporter yycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D PPM_4657 ywbF; putative transporter ywbF K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D PPM_3617 narK; Nitrite extrusion protein Nitrite facilitator K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PPM_3192 nasA; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D PPM_1771 tetA1; tetracycline resistance protein, class A TetA(A) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PPM_0416 tcaB; permease of the major facilitator superfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_4194 blt9; Multidrug resistance protein 1 Multidrug-efflux transporter 1 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_0466 blt1; multidrug resistance protein 1 Multidrug-efflux transporter 1 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_0973 blt3; multidrug resistance protein 2 Multidrug-efflux transporter 2 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_3747 blt7; Multidrug resistance protein 1 Multidrug-efflux transporter 1 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_3599 blt5; Proton-coupled folate transporter Heme carrier protein 1 K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_0289 norA1; quinolone resistance protein norA K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein
D PPM_4123 yuxJ; putative MFS-type transporter yuxJ ORF1 K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein
D PPM_1006 pmrA; multi-drug resistance efflux pump, pmrA-like K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_1685 mdtG; multidrug resistance protein mdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PPM_4800 ydhL; putative sugar efflux transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D PPM_1428 araJ1; arabinose efflux permease K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D PPM_0878 araJ; putative sugar efflux transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PPM_3651 ybcL; putative MFS-type transporter ybcL K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D PPM_3656 lacI5; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D PPM_2127 tet1; tetracycline resistance protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PPM_3487 tetB; Tetracycline resistance protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PPM_2315 tetL; tetracycline resistance protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PPM_2493 lmrB; lincomycin resistance protein lmrB K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D PPM_2537 ykuC5; uncharacterized MFS-type transporter ykuC K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D PPM_2716 yjbB; uncharacterized MFS-type transporter yjbB K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D PPM_1799 yitG; putative glucose transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D PPM_0676 yfmO; multidrug efflux protein yfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D PPM_1036 fsR; uncharacterized MFS-type transporter yfnC K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D PPM_4259 ynfM3; High-affinity glucose transporter SNF3 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D PPM_1360 yqgE; uncharacterized protein yqgE K08222 yqgE; MFS transporter, YQGE family, putative transporter
D PPM_2039 yceI; putative metabolite transport protein yceI K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PPM_3171 ptsI1; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PPM_3795 ptsI3; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PPM_3156 hpr1; phosphocarrier protein HPr Histidine-containing protein K02784 ptsH; phosphocarrier protein HPr
D PPM_3796 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PPM_0103 bglP3; PTS system, glucose-specific enzyme II, A component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PPM_3172 glcA; PTS system, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_3797 ptsG3; PTS system, glucose-specific IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D PPM_3919 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PPM_0287 ptsG1; PTS system, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D PPM_1039 scrA5; PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0728 scrA3; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_0314 scrA1; putative sucrose-specific PTS permease, enzyme II K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D PPM_1264 bglP1; beta-glucosides-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_4015 bglP9; PTS system, beta-glucosides specific enzyme IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_3611 bglP5; PTS system, beta-glucosides specific enzyme IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_3933 arbF3; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_4156 bglP11; PTS system, beta-glucoside-specific enzyme II, ABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_1266 bglP2; PTS system, beta-glucosides-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_1610 arbF1; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PPM_0628 treP; PTS system, trehalose-specific enzyme II, BC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D PPM_1605 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PPM_3788 mtlA1; PTS system, mannitol specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D PPM_3790 mtlA3; PTS system, mannitol-specific enzyme II, BC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D PPM_4022 lacF9; Lactose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4885 ydhN3; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4164 licA3; Lactose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D PPM_4025 celA5; PTS system lactose-specific EIICB component EIICB-Lac K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4886 ydhM; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4165 lacEIICB; PTS system lactose-specific EIICB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D PPM_4023 licC; PTS system lactose-specific EIICB component EIICB-Lac K02761 celB; cellobiose PTS system EIIC component
D PPM_4884 ydhO3; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PPM_4166 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D PPM_4972 manP; PTS system, mannose-specific IIA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D PPM_0444 manX3; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D PPM_0443 manX1; PTS enzyme IIAB, mannose-specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D PPM_0445 sorA; sorbose permease IIC component PTS system sorbose-specific EIIC component; EIIC-Sor K02795 manY; mannose PTS system EIIC component
D PPM_0446 manZ; mannose permease IID component PTS system mannose-specific EIID component; EIID-Man; EII-M-Man K02796 manZ; mannose PTS system EIID component
D PPM_3720 sgaT; Ascorbate-specific permease IIC component ulaA Ascorbate-specific PTS system EIIC component K03475 ulaA; ascorbate PTS system EIIC component
D PPM_3918 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PPM_1717 nrgA; ammonium transporter 1 member 2 AtAMT1;2 K03320 amt; ammonium transporter, Amt family
D PPM_0050 yabS; uncharacterized protein yabS K07114 yfbK; Ca-activated chloride channel homolog
D PPM_2122 vWFA2; von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D PPM_2119 vWFA1; von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D PPM_4665 yrhG; formate/nitrite transporter K21993 fdhC; formate transporter
D PPM_0910 nirC; uncharacterized transporter ywcJ K02598 nirC; nitrite transporter
D PPM_0568 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PPM_5059 mcsBUsg; putative mscS family protein K22044 ybiO; moderate conductance mechanosensitive channel
D PPM_0094 motA1; chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_4519 motA3; Chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_0093 motB; chemotaxis protein motB Motility protein B K02557 motB; chemotaxis protein MotB
D PPM_4520 ytxE; Chemotaxis protein lafU K02557 motB; chemotaxis protein MotB
D PPM_0833 corA1; magnesium transport protein corA K03284 corA; magnesium transporter
D PPM_1374 corA3; zinc transport protein zntB K03284 corA; magnesium transporter
D PPM_4228 corA5; Magnesium transport protein corA K03284 corA; magnesium transporter
D PPM_3837 crcB; crcB-like protein K06199 crcB; fluoride exporter
D PPM_4309 corC5; UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_2527 corC3; UPF0053 protein yugS K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_0999 yhdP; UPF0053 protein yhdP K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_1536 corC1; UPF0053 protein yhdP K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_2190 afsK; serine/threonine-protein kinase afsK K17713 bamB; outer membrane protein assembly factor BamB
D PPM_3736 M1_4126; Glutamine-rich protein 2 K21449 ata; trimeric autotransporter adhesin
D PPM_4772 ywbH; UPF0299 membrane protein K06518 cidA; holin-like protein
D PPM_4873 yihO3; putative symporter yihO K16210 togT; oligogalacturonide transporter
D PPM_4261 lysP; Lysine-specific permease K11733 lysP; lysine-specific permease
D PPM_0494 frlA; putative fructoselysine transporter frlA K19540 frlA; fructoselysine transporter
D PPM_0766 M1-959; hypothetical protein K06296 gerKB; spore germination protein KB
D PPM_0768 gerAB1; uncharacterized amino-acid permease P7G5.06 K06296 gerKB; spore germination protein KB
D PPM_0487 gerKB; spore germination protein KB K06296 gerKB; spore germination protein KB
D PPM_2237 gerA2; spore germination protein A2 K06296 gerKB; spore germination protein KB
D PPM_2292 yndE11; spore germination protein yndE K06296 gerKB; spore germination protein KB
D PPM_4725 yndE13; Spore germination protein yndE K06296 gerKB; spore germination protein KB
D PPM_0631 yndE5; spore germination protein yndE K06311 yndE; spore germination protein
D PPM_0639 yndE7; spore germination protein yndE K06311 yndE; spore germination protein
D PPM_0720 yndE9; spore germination protein A2 K06311 yndE; spore germination protein
D PPM_0281 yndE3; spore germination protein A2 K06311 yndE; spore germination protein
D PPM_2817 yecA; large neutral amino acids transporter small subunit 2 K16263 yjeH; amino acid efflux transporter
D PPM_4276 gufA; Zinc transporter zupT K07238 TC.ZIP; zinc transporter, ZIP family
D PPM_4983 qacH; Spermidine export protein mdtJ K03297 emrE; small multidrug resistance pump
D PPM_2339 M1_2639; hypothetical protein K18924 ykkC; paired small multidrug resistance pump
D PPM_4648 ykkC3; Spermidine export protein mdtJ K18924 ykkC; paired small multidrug resistance pump
D PPM_2701 ykkC1; multidrug resistance protein ykkC K18924 ykkC; paired small multidrug resistance pump
D PPM_2702 ykkD1; multidrug resistance protein ykkD K18925 ykkD; paired small multidrug resistance pump
D PPM_4649 ykkD3; Spermidine export protein mdtJ K18925 ykkD; paired small multidrug resistance pump
D PPM_2473 glcU; putative glucose uptake protein K05340 glcU; glucose uptake protein
D PPM_2474 lin0212; putative sugar uptake protein K05340 glcU; glucose uptake protein
D PPM_3115 rhaT; putative sugar uptake protein K05340 glcU; glucose uptake protein
D PPM_4642 M1_5078; hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PPM_4644 M1_5080; hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D PPM_3236 yfjF; UPF0060 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PPM_4979 M1_5430; High-affinity gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PPM_4982 gntP; putative permease yojA K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PPM_3509 kdgT; 2-keto-3-deoxygluconate permease KDG permease K02526 kdgT; 2-keto-3-deoxygluconate permease
D PPM_1542 dcuB; anaerobic C4-dicarboxylate transporter dcuA K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PPM_3154 cax; Vacuolar cation/proton exchanger 5 Ca(2+)/H(+) exchanger 5; Ca(2+)/H(+) antiporter CAX5 K07300 chaA; Ca2+:H+ antiporter
D PPM_0295 gltT; proton glutamate symport protein Glutamate-aspartate carrier protein K11102 gltP; proton glutamate symport protein
D PPM_2516 cvrA; cell volume regulation protein A K11105 cvrA; potassium/hydrogen antiporter
D PPM_4779 napA; Glutathione-regulated potassium-efflux system protein kefB K(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D PPM_1381 trkA1; uncharacterized transporter K07228 khtT; K+:H+ antiporter subunit KhtT
D PPM_1380 yhaU; glutathione-regulated potassium-efflux system protein kefB K26732 khtU; K+:H+ antiporter subunit KhtU
D PPM_0070 ktrB1; Ktr system potassium uptake protein D K(+)-uptake protein ktrD K03498 trkH; trk/ktr system potassium uptake protein
D PPM_4075 ktrB3; Ktr system potassium uptake protein B K(+)-uptake protein ktrB K03498 trkH; trk/ktr system potassium uptake protein
D PPM_4074 trkA3; Ktr system potassium uptake protein C K(+)-uptake protein ktrC K03499 trkA; trk/ktr system potassium uptake protein
D PPM_4181 trkA5; Ktr system potassium uptake protein A K(+)-uptake protein ktrA K03499 trkA; trk/ktr system potassium uptake protein
D PPM_3849 uraA; Nucleobase-ascorbate transporter 8 AtNAT8 K02824 uraA; uracil permease
D PPM_4912 pbuX; Xanthine permease K16169 pbuX; xanthine permease
D PPM_0777 xprA; putative xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PPM_3841 yieG; Inner membrane protein YieG K06901 pbuG; adenine/guanine/hypoxanthine permease
D PPM_4353 nupC; Pyrimidine nucleoside transport protein K11535 nupC; nucleoside transport protein
D PPM_4694 ST3; High affinity sulfate transporter 2 K03321 TC.SULP; sulfate permease, SulP family
D PPM_3743 ST2; High affinity sulfate transporter 2 K03321 TC.SULP; sulfate permease, SulP family
D PPM_1215 mntH; putative manganese transport protein K03322 mntH; manganese transport protein
D PPM_3420 yqeW; putative protein YqeW K03324 yjbB; phosphate:Na+ symporter
D PPM_3096 arsB1; arsenical pump membrane protein Arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D PPM_4372 arsB3; Arsenical pump membrane protein Arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D PPM_4116 mviN; MviN-like Virulence factor K06409 spoVB; stage V sporulation protein B
D PPM_3857 ykvU; Sporulation protein YkvU K06409 spoVB; stage V sporulation protein B
D PPM_3195 ywkB; putative auxin efflux carrier component 8 AtPIN8 K13936 mdcF; malonate transporter and related proteins
D PPM_2560 M1_2879; putative auxin efflux carrier component 8 K24180 mleP; malate permease and related proteins
D PPM_4920 M1_5369; putative auxin efflux carrier component 8 K24180 mleP; malate permease and related proteins
D PPM_2206 MTH_1382; uncharacterized transporter K24180 mleP; malate permease and related proteins
D PPM_4655 argO; Arginine exporter protein argO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D PPM_0626 lysE1; cysteine/O-acetylserine efflux protein K11249 eamB; cysteine/O-acetylserine efflux protein
D PPM_1427 azlC; uncharacterized membrane protein K26605 azlC; branched chain amino acid efflux pump
D PPM_1426 azlD; branched-chain amino acid transport protein AzlD K26606 azlD; branched chain amino acid efflux pump
D PPM_3510 UPF0065 protein K07795 tctC; putative tricarboxylic transport membrane protein
D PPM_0188 M1-344; hypothetical protein DUF165 K09125 yhhQ; queuosine precursor transporter
D PPM_1268 ypdP; uncharacterized protein ypdP K09125 yhhQ; queuosine precursor transporter
D PPM_3152 ftsW1; cell division protein ftsW K03588 ftsW; cell division protein FtsW
D PPM_3356 ftsW3; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D PPM_4633 ywlD; UPF0059 membrane protein K23242 mntP; manganese efflux pump family protein
D PPM_3986 ywbL; putative membrane protein ywbL K07243 FTR; high-affinity iron transporter
D PPM_3984 ycdO; UPF0409 protein K07224 efeO; iron uptake system component EfeO
D PPM_3985 ycdB; Peroxidase ycdB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D PPM_3057 ccdA; cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D PPM_3624 narG; nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3623 narH; respiratory nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D PPM_3621 narI; nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D PPM_1092 epsB; putative tyrosine-protein kinase epsB K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PPM_1112 yveL; capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D PPM_1091 ywqC; putative capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D PPM_1111 yveK; putative capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D PPM_4264 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PPM_1004 mgtC1; protein sapB K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PPM_4207 mgtC3; MgtC family membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D PPM_0413 copD; copper resistance protein D K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:ppo02044]
D PPM_1234 pulO; type 4 prepilin-like proteins leader peptide-processing enzyme K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PPM_1227 cpaF; flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_2615 tadA; type II secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_p0111 pPPM1a_129; AAA ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_1228 tadB; hypothetical Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D PPM_1229 tadC; flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D PPM_3342 yggT; hypothetical protein K02221 yggT; YggT family protein
D PPM_3449 comEA; DNA polymerase III polC-type K02237 comEA; competence protein ComEA
D PPM_3448 comEB; Deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PPM_3447 comEC; ComE operon protein 3 K02238 comEC; competence protein ComEC
D PPM_3450 Pyrroline-5-carboxylate reductase P5C reductase K02239 comER; competence protein ComER
D PPM_4582 comFA; ComF operon protein 1 K02240 comFA; competence protein ComFA
D PPM_4581 comF; Competence protein F K02242 comFC; competence protein ComFC
D PPM_1903 flhA; flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D PPM_1902 flhB; flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D PPM_1865 ylqH; flagellar biosynthetic protein flhB K04061 flhB2; flagellar biosynthesis protein
D PPM_1883 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PPM_1885 fliH; flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH
D PPM_1886 fliI; flagellar-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PPM_1896 fliY3; flagellar motor switch phosphatase fliY CheY-P phosphatase fliY; Flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D PPM_1898 fliZ; flagellar biosynthetic protein fliZ Flags: Precursor K02418 fliO; flagellar protein FliO/FliZ
D PPM_1899 fliP; flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D PPM_1900 fliQ; flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PPM_1901 fliR; flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D PPM_1454 secA1; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_4554 secA3; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PPM_3855 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D PPM_4469 secE; putative preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D PPM_3854 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D PPM_0175 secG; putative protein-export membrane protein secG K03075 secG; preprotein translocase subunit SecG
D PPM_4434 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D PPM_1855 ffH; signal recognition particle 54 kDa protein 2 SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PPM_1852 ftsY; signal recognition particle 54 kDa protein 2 K03110 ftsY; fused signal recognition particle receptor
D PPM_3860 yajC; UPF0092 membrane protein K03210 yajC; preprotein translocase subunit YajC
D PPM_2192 yqjG; inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_5069 oxaA; Inner membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PPM_1156 tatB; tatB-like, Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D PPM_1157 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ppo02042]
D PPM_4309 corC5; UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_2527 corC3; UPF0053 protein yugS K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_0999 yhdP; UPF0053 protein yhdP K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_1536 corC1; UPF0053 protein yhdP K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PPM_1853 yplQ; hemolysin-3 Hemolysin III; Hly-III K11068 hlyIII; hemolysin III
D PPM_0365 hyl; putative hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:ppo02022]
D PPM_1579 phoR1; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_2083 sasA; adaptive-response sensory-kinase SasA K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_1412 yycG1; two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_4319 resE7; sensor protein ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PPM_1580 ycf27; putative transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_2603 ykoG5; phosphate regulon transcriptional regulatory protein phoB K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_4723 phoP5; Alkaline phosphatase synthesis transcriptional regulatory protein phoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_1411 yycF; transcriptional regulatory protein YycF K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PPM_1416 yvrH; transcriptional regulatory protein yvrH K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PPM_2268 yclJ; sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PPM_1225 kdpD1; osmosensitive K+ channel His kinase sensor domain K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PPM_2341 kdpD3; two-component system, OmpR family, sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PPM_2342 kdpE; transcriptional regulatory protein yycF K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PPM_2970 resE5; sensor histidine kinase ResE K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D PPM_3734 srrA3; putative transcriptional regulator ycf27 OmpR-like protein K07775 resD; two-component system, OmpR family, response regulator ResD
D PPM_2971 resD3; transcriptional regulatory protein resD K07775 resD; two-component system, OmpR family, response regulator ResD
D PPM_5035 yycG3; two-component system, OmpR family, sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PPM_5036 walR3; Transcriptional regulatory protein yycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D PPM_1423 ompR; alkaline phosphatase synthesis transcriptional regulatory protein sphR K07668 vicR; two-component system, OmpR family, response regulator VicR
D PPM_1387 mprA1; response regulator mprA Mycobacterial persistence regulator A K07669 mprA; two-component system, OmpR family, response regulator MprA
D PPM_4955 bceS; integral membrane sensor signal transduction histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D PPM_4954 bceR; Response regulator protein graR Glycopeptide resistance-associated protein R K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D PPM_4176 yxdK; sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D PPM_4177 yxdJ; Transcriptional regulatory protein yycF K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D PPM_0646 cseA; sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D PPM_2167 walR1; transcriptional regulatory protein WalR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D PPM_1408 ykoH1; signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PPM_2197 ykoH3; two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PPM_1409 ykoG1; uncharacterized transcriptional regulatory protein ykoG K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PPM_2196 ykoG3; uncharacterized transcriptional regulatory protein ykoG K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PPM_2488 eTR1; ethylene receptor MEETR1; Cm-ETR1 K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D PPM_2487 yycF1; transcriptional regulatory protein yycF K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D PPM_2390 resD1; transcriptional regulatory protein resD K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D PPM_0354 phoR3; sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PPM_1388 lisK; sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PPM_0353 phoP1; putative transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D PPM_2082 mprA3; response regulator MprA K02483 K02483; two-component system, OmpR family, response regulator
D PPM_1090 yhcZ; response regulator gacA Global activator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D PPM_0921 yfiJ; two-component protein kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D PPM_4585 degS; two-component sensor histidine kinase involved in degradative enzyme K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D PPM_4584 degU; Transcriptional regulatory protein degU Protease production enhancer protein K07692 degU; two-component system, NarL family, response regulator DegU
D PPM_0862 desK; sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PPM_0863 desR; transcriptional regulatory protein uhpA K07693 desR; two-component system, NarL family, response regulator DesR
D PPM_4188 yvqE3; sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D PPM_4187 yvqC; Transcriptional regulatory protein liaR K11618 liaR; two-component system, NarL family, response regulator LiaR
D PPM_3619 nreB; hypothetical protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D PPM_0371 M1-535; pas/pac sensor signal transduction histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D PPM_0372 nreC1; chemotaxis response regulator protein-glutamate methylesterase K07696 nreC; two-component system, NarL family, response regulator NreC
D PPM_3618 nreC5; Transcriptional regulatory protein uhpA K07696 nreC; two-component system, NarL family, response regulator NreC
D PPM_4385 ydfH3; two-component system, NarL family, sensor histidine kinase YdfH K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D PPM_4384 ydfI; putative transcriptional regulatory protein yfiK K11624 ydfI; two-component system, NarL family, response regulator YdfI
D PPM_1397 narP; transcriptional regulatory protein degU Protease production enhancer protein K11624 ydfI; two-component system, NarL family, response regulator YdfI
D PPM_4055 kinB3; sporulation kinase B K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D PPM_1011 kinB1; sporulation kinase B K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D PPM_0091 kinE; sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D PPM_0132 spo0F; stage 0 sporulation protein F K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D PPM_3021 spo0A; stage 0 sporulation protein A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D PPM_3431 dcuS; sensory box histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PPM_4923 yufL; two-component system, CitB family, sensor histidine kinase MalK K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D PPM_3430 dcuR; Transcriptional regulatory protein malR Malate response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D PPM_4922 malR3; two-component system, CitB family, response regulator MalR K11615 malR; two-component system, CitB family, response regulator MalR
D PPM_0807 citS; sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D PPM_3780 ypdA3; putative sensor protein K27884 pyrS; two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:2.7.13.3]
D PPM_3779 ypdB; putative response regulatory protein K27885 pyrR; two-component system, LytTR family, high-concentration pyruvate response regulator
D PPM_0408 M1-574; chemotaxis response regulator protein-glutamate methylesterase 1 K02477 K02477; two-component system, LytTR family, response regulator
D PPM_0440 lytT; chemotaxis response regulator protein-glutamate methylesterase 1 K02477 K02477; two-component system, LytTR family, response regulator
D PPM_1907 cheA; two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PPM_1897 cheY1; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_2145 cheY3; putative transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_1906 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PPM_0294 ycbA; sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D PPM_0293 ycbB1; chemotaxis response regulator protein-glutamate methylesterase K07719 glnL; two-component system, response regulator GlnL
D PPM_0751 yesM11; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0269 yesM1; two-component sensor histidine kinase-like protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0379 yesM3; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0526 yesM5; two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0552 yesM7; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_1022 yesM13; two-component sensor kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0661 yesM9; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2065 yesM15; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2300 yesM17; two-component sensor kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_3717 yesM23; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4302 yesM27; two-component sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_3203 yesM21; histidine kinase,histidine kinase, HAMP region K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4838 yesM29; integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4148 yesM25; two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_2459 yesM19; two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_4868 yesM31; two-component system, sensor histidine kinase YesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D PPM_0752 yesN7; chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K07720 yesN; two-component system, response regulator YesN
D PPM_0270 yesN1; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_0977 yesN9; chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K07720 yesN; two-component system, response regulator YesN
D PPM_0380 yesN3; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_0525 ntrC; nitrogen regulation protein NR(I) K07720 yesN; two-component system, response regulator YesN
D PPM_0553 araC7; chemotaxis response regulator protein-glutamate methylesterase 3 K07720 yesN; two-component system, response regulator YesN
D PPM_1023 yesN11; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_0662 yesN5; uncharacterized transcriptional regulatory protein yesN K07720 yesN; two-component system, response regulator YesN
D PPM_2301 yesN13; uncharacterized transcriptional regulatory protein yesN K07720 yesN; two-component system, response regulator YesN
D PPM_2458 yesN15; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_4867 yesN21; Nitrogen assimilation regulatory protein ntrC K07720 yesN; two-component system, response regulator YesN
D PPM_4301 yesN19; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K07720 yesN; two-component system, response regulator YesN
D PPM_3202 yesN17; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_4839 cheR2; Chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_4149 cheR1; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K07720 yesN; two-component system, response regulator YesN
D PPM_2066 rr09; chemotaxis response regulator protein-glutamate methylesterase K07720 yesN; two-component system, response regulator YesN
D PPM_3258 ytdP1; HTH-type transcriptional regulator yesS K07720 yesN; two-component system, response regulator YesN
D PPM_3716 tctD; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K07720 yesN; two-component system, response regulator YesN
D PPM_4763 dhkJ; multi-sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PPM_4232 ETR2; histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D PPM_3188 nasR; nitrate regulatory protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D PPM_0407 M1-573; integral membrane sensor hybrid histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
D PPM_0439 ywpD; hypothetical protein K19694 chiS; two-component system, sensor histidine kinase ChiS
D PPM_2267 barA; cheY-like receiver K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:ppo02035]
D PPM_1907 cheA; two-component sensor histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PPM_1908 cheW3; putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D PPM_4357 cheW11; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D PPM_4060 cheX; CheY-P phosphatase cheX K03409 cheX; chemotaxis protein CheX
D PPM_1909 cheC; cheY-P phosphatase cheC K03410 cheC; chemotaxis protein CheC
D PPM_1910 cheD; chemoreceptor glutamine deamidase cheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D PPM_2934 cheR3; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PPM_4233 cheR5; methyltransferase, CheR family K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D PPM_1906 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PPM_1897 cheY1; chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_2145 cheY3; putative transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D PPM_1000 mcpA1; methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_0475 tse; methyl-accepting chemotaxis serine transducer K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1182 mcpA3; methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1581 aer; methyl-accepting chemotaxis protein II MCP-II; Aspartate chemoreceptor protein K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1263 mcpA5; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1792 mcpB1; methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1798 yoaH; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1807 cheW1; methyl-accepting chemotaxis protein 1 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_2266 cheW5; methyl-accepting chemotaxis protein mcpA H1 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_5016 mcpC; Laminin subunit alpha-1 Laminin A chain K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3575 mcpA7; Methyl-accepting chemotaxis protein mcpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3600 tlpA3; Methyl-accepting chemotaxis protein 4 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3782 M1_4175; hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3018 tlpA1; methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3816 tar; Methyl-accepting chemotaxis protein tlpB K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3826 mcpB3; Methyl-accepting chemotaxis protein mcpC K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3850 cheW9; Methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3196 cheW7; methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_3976 tlpB1; Methyl-accepting chemotaxis protein mcpB H3 K03406 mcp; methyl-accepting chemotaxis protein
D PPM_4719 tlpB3; Methyl-accepting chemotaxis protein tlpA K03406 mcp; methyl-accepting chemotaxis protein
D PPM_1885 fliH; flagellar assembly protein fliH K02411 fliH; flagellar assembly protein FliH
D PPM_1886 fliI; flagellar-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D PPM_1887 fliJ; flagellar fliJ protein K02413 fliJ; flagellar protein FliJ
D PPM_1898 fliZ; flagellar biosynthetic protein fliZ Flags: Precursor K02418 fliO; flagellar protein FliO/FliZ
D PPM_1899 fliP; flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D PPM_1900 fliQ; flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D PPM_1901 fliR; flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D PPM_1903 flhA; flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D PPM_1902 flhB; flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D PPM_1884 fliG; flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D PPM_1895 fliM; flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D PPM_1896 fliY3; flagellar motor switch phosphatase fliY CheY-P phosphatase fliY; Flagellar motor switch protein fliY K02417 fliN; flagellar motor switch protein FliN
D PPM_1883 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D PPM_1894 fliL; flagellar fliL protein K02415 fliL; flagellar protein FliL
D PPM_1882 fliE; flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D PPM_1889 flgC3; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D PPM_1880 flgB; flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D PPM_1881 flgC1; flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D PPM_1890 flgD; flaA locus uncharacterized protein ylxG ORF 8 K02389 flgD; flagellar basal-body rod modification protein FlgD
D PPM_4607 flhO; Flagellar basal-body rod protein flgG Distal rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D PPM_4606 flhP; Flagellar basal-body rod protein flgG Distal rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D PPM_1892 flgE; flagellar basal-body rod protein flgG Distal rod protein K02390 flgE; flagellar hook protein FlgE
D PPM_4576 flgK; Flagellar hook-associated protein 1 HAP1 K02396 flgK; flagellar hook-associated protein 1
D PPM_4575 flgL; Flagellar filament 33 kDa core protein Class B K02397 flgL; flagellar hook-associated protein 3 FlgL
D PPM_4571 hag; Flagellar filament 33 kDa core protein Class B K02406 fliC; flagellin
D PPM_4562 fliD; Flagellar hook-associated protein 2 HAP2 K02407 fliD; flagellar hook-associated protein 2
D PPM_4561 fliS; Flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS
D PPM_1912 sigD; RNA polymerase sigma factor rpoD Sigma-70 K02405 fliA; RNA polymerase sigma factor FliA
D PPM_0094 motA1; chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_4519 motA3; Chemotaxis protein motA Motility protein A K02556 motA; chemotaxis protein MotA
D PPM_0093 motB; chemotaxis protein motB Motility protein B K02557 motB; chemotaxis protein MotB
D PPM_4520 ytxE; Chemotaxis protein lafU K02557 motB; chemotaxis protein MotB
D PPM_0799 fliY1; membrane-bound lytic murein transglycosylase F Murein lyase F; Flags: Precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_3750 fliY5; putative amino-acid ABC transporter, periplasmic amino acid-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_4901 tcyJ; Membrane-bound lytic murein transglycosylase F K02424 tcyA; L-cystine transport system substrate-binding protein
D PPM_4573 yviF; Flagellar assembly factor fliW K13626 fliW; flagellar assembly factor FliW
D PPM_4578 flgM; Negative regulator of flagellin synthesis Anti-sigma-D factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D PPM_1893 hypothetical protein K02385 flbD; flagellar protein FlbD
D PPM_1904 flhF; signal recognition 54 kDa protein SRP54 K02404 flhF; flagellar biosynthesis protein FlhF
D PPM_1905 nifH; nitrogenase iron protein Nitrogenase component II; Nitrogenase Fe protein; Nitrogenase reductase K04562 flhG; flagellar biosynthesis protein FlhG
D PPM_1234 pulO; type 4 prepilin-like proteins leader peptide-processing enzyme K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D PPM_1227 cpaF; flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_2615 tadA; type II secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PPM_p0111 pPPM1a_129; AAA ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ppo04812]
D PPM_3886 mreB; Chaperone protein dnaK Heat shock protein 70 K03569 mreB; rod shape-determining protein MreB and related proteins
D PPM_4608 mbl; Chaperone protein dnaK Heat shock protein 70 K03569 mreB; rod shape-determining protein MreB and related proteins
D PPM_p0118 pPPM1a_137; hypothetical protein K18640 parM; plasmid segregation protein ParM
D PPM_3350 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D PPM_3351 ftsA; Chaperone protein dnaK Heat shock protein 70 K03590 ftsA; cell division protein FtsA
D PPM_3883 minC; putative septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D PPM_3882 minD; Septum site-determining protein minD Cell division inhibitor minD K03609 minD; septum site-determining protein MinD
D PPM_0225 soj1; soj-like protein K03496 parA; chromosome partitioning protein
D PPM_5063 soj; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D PPM_2797 parB1; putative plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_5062 parB7; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PPM_5064 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ppo04147]
D PPM_0345 htpG1; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PPM_1650 htpG3; chaperone protein htpG Heat shock protein htpG; High temperature protein G K04079 HSP90A; molecular chaperone HtpG
D PPM_0174 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PPM_0170 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PPM_0171 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PPM_1564 pykA3; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_0316 pykA1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PPM_1967 dp2; renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PPM_1347 ykuU; 2-cys peroxiredoxin-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PPM_3799 yuaG; putative protein YuaG K07192 FLOT; flotillin
D PPM_1159 groEL; 60 kDa chaperonin Protein Cpn60; groEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PPM_3433 dnaK; Chaperone protein dnaK Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D PPM_1243 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PPM_0080 guaB; inosine monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PPM_4456 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu
D PPM_3412 hit; Histidine triad nucleotide-binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PPM_0453 ldh1; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_2535 ldh3; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PPM_0073 fecS; feruloyl-CoA synthetase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PPM_1146 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PPM_3366 ahcY; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PPM_4433 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PPM_3851 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PPM_4544 argH3; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PPM_4545 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PPM_0996 galK1; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PPM_3804 galK3; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PPM_2582 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PPM_3917 glpK1; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PPM_4775 glpK5; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PPM_4162 glpK3; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PPM_1391 glnA1; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_2801 glnA3; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PPM_3897 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PPM_0096 dcoH; putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PPM_1284 phoB1; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2871 phoB3; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2969 serA3; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PPM_0796 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PPM_0621 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2595 pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_3010 lpdV; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PPM_2036 zwf1; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PPM_4184 zwf3; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PPM_0172 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PPM_0105 gpmA1; phosphoglycerate mutase family protein,putative K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4994 pgm3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PPM_4820 gpmA3; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ppo02048]
D PPM_p0011 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_3547 M1_3919; hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PPM_p0129 bgl2; putative adenine-specific DNA-methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D PPM_p0197 nlaX; cytosine-specific methyltransferase NlaX K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0201 scrFIA; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_p0169 dcm1; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PPM_3515 M1_3884; hypothetical protein K07448 mrr; restriction system protein
D PPM_p0244 pPPM1a_287; hypothetical protein K07448 mrr; restriction system protein
D PPM_1460 mrr; restriction endonuclease, type IV-like, Mrr K07448 mrr; restriction system protein
D PPM_1198 pemK; toxin mazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PPM_1197 ydcD; antitoxin EndoAI EndoA inhibitor K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D PPM_0210 M1-367; PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D PPM_3350 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D PPM_3886 mreB; Chaperone protein dnaK Heat shock protein 70 K03569 mreB; rod shape-determining protein MreB and related proteins
D PPM_4608 mbl; Chaperone protein dnaK Heat shock protein 70 K03569 mreB; rod shape-determining protein MreB and related proteins
D PPM_2842 gyrA3; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PPM_2843 gyrB3; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PPM_2020 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PPM_2188 nifS; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3829 yrvO; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3382 nifZ; aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PPM_3101 M1_3455; hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ppo01504]
D PPM_4069 yokD; aminoglycoside N3-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D PPM_2323 yyaR; putative streptothricin acetyltransferase K19273 sat4; streptothricin acetyltransferase [EC:2.3.-.-]
D PPM_1439 aadD; kanamycin nucleotidyltransferase K17882 aadD; kanamycin nucleotidyltransferase [EC:2.7.7.-]
D PPM_1056 aadE; aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D PPM_2150 aadK; aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D PPM_1771 tetA1; tetracycline resistance protein, class A TetA(A) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PPM_2127 tet1; tetracycline resistance protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PPM_3487 tetB; Tetracycline resistance protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PPM_2315 tetL; tetracycline resistance protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D PPM_5014 tet3; Elongation factor G 2 EF-G 2 K18220 tetM; ribosomal protection tetracycline resistance protein
D PPM_2727 M1_3061; putative ABC transporter ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D PPM_2537 ykuC5; uncharacterized MFS-type transporter ykuC K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D PPM_2716 yjbB; uncharacterized MFS-type transporter yjbB K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D PPM_2423 ereB3; erythromycin esterase type II K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D PPM_4403 ereB5; Erythromycin esterase type II K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D PPM_0657 ycbJ; uncharacterized protein ycbJ K06979 mph; macrolide phosphotransferase
D PPM_2004 M1_2279; putative O-phosphotransferase K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
D PPM_4766 M1_5209; RNA-binding protein 6 K18555 qnr; fluoroquinolone resistance protein
D PPM_0646 cseA; sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D PPM_0534 yodJ; D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PPM_2167 walR1; transcriptional regulatory protein WalR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D PPM_0463 mprF; putative lysylphosphatidylglycerol synthetase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PPM_3840 yvcC3; Lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_1078 yvcC1; lipid A export ATP-binding/permease protein msbA K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PPM_0903 mdtK; multidrug resistance protein mdtK K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ppo00536]
D PPM_0365 hyl; putative hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppo00537]
D PPM_1284 phoB1; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_2871 phoB3; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D PPM_1967 dp2; renal dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D PPM_0365 hyl; putative hyaluronidase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ppo03100]
D PPM_t060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t109 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t107 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PPM_t012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t031 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t047 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t098 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t079 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PPM_t015 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t106 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t095 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t078 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PPM_t008 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t040 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t090 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t073 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PPM_t030 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PPM_t082 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PPM_t026 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t102 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t084 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PPM_t018 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t037 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t054 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t093 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t104 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t076 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PPM_t029 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t096 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t099 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t071 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t083 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PPM_t025 tRNA-His K14226 tRNA-His; tRNA His
D PPM_t085 tRNA-His K14226 tRNA-His; tRNA His
D PPM_t002 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PPM_t013 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PPM_t108 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PPM_t048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t057 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t063 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t062 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t081 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t069 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PPM_t061 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t011 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t044 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t055 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t101 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t072 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PPM_t067 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t066 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t005 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t016 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t020 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t039 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t074 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t091 tRNA-Met K14230 tRNA-Met; tRNA Met
D PPM_t009 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PPM_t022 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PPM_t089 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PPM_t032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t049 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t058 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t068 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PPM_t077 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t094 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t036 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t110 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PPM_t023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t041 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t051 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t088 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t105 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PPM_t086 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PPM_t010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t024 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t042 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t087 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PPM_t064 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t006 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t038 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t019 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t075 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t092 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_t103 tRNA-Val K14237 tRNA-Val; tRNA Val
D PPM_r042 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r028 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r016 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r019 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r025 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r039 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r035 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r033 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PPM_r009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r029 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r023 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r026 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r032 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r034 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r041 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PPM_r003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r027 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r021 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r018 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r008 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r038 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PPM_r040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PPM_4921 ldhD; D-lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D PPM_4144 iolS; putative oxidoreductase yccK K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D PPM_2318 M1_2618; aldo-keto reductase family 1 member C1 K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PPM_3806 tas3; Voltage-gated potassium channel subunit beta-1 K(+) channel subunit beta-1 K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PPM_3801 yugJ; NADH-dependent butanol dehydrogenase A K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D PPM_0437 yajO; putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D PPM_2574 yqjM3; NADH-dependent flavin oxidoreductase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D PPM_2310 yqjM1; NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D PPM_4865 yqjM5; NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D PPM_2044 yocJ; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PPM_2344 acpD; azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D PPM_1985 trxB3; pyridine nucleotide-disulfide oxidoreductase family protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D PPM_1740 msrB; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PPM_3080 msrA; peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D PPM_1529 ydbD; putative manganese-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D PPM_1530 ydhU; manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D PPM_0765 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PPM_1712 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PPM_1871 ohrA3; organic hydroperoxide resistance protein-like 2 K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PPM_1217 ohrA1; organic hydroperoxide resistance protein-like 2 K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PPM_2365 ymaD3; hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PPM_4223 M1_4639; Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PPM_4716 M1_5157; Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PPM_4880 hmp; nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PPM_2278 M1_2575; ferritin, heavy subunit K02217 ftnA; ferritin [EC:1.16.3.2]
D PPM_1294 ycgT; thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PPM_4087 trxB5; pyridine nucleotide-disulfide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PPM_3095 arsC1; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PPM_4733 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PPM_p0160 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PPM_3062 pflA; pyruvate formate-lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PPM_0561 dltE1; short-chain dehydrogenase/reductase SDR K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D PPM_3552 sdr5; short-chain dehydrogenase/reductase SDR K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D PPM_0654 ydfN; putative NADH dehydrogenase/NAD(P)H nitroreductase rutE Pyrimidine utilization protein E K15976 K15976; putative NAD(P)H nitroreductase [EC:1.-.-.-]
D PPM_1683 ypsC; hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D PPM_2338 paiA; uncharacterized N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D PPM_0624 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PPM_1658 yiaC; putative (glutamine-hydrolyzing) GMP synthase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D PPM_2059 M1_2343; putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PPM_3165 acuA; acetoin utilization protein AcuA K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D PPM_2279 ytmI; uncharacterized N-acetyltransferase ytmI K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-]
D PPM_2976 tgl; protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D PPM_0844 M1-1040; hypothetical protein K15534 K15534; beta-D-galactosyl-(1->4)-L-rhamnose phosphorylase [EC:2.4.1.247]
D PPM_4807 unk1; hypothetical protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D PPM_4802 M1_5246; glycosidase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D PPM_0333 chvB1; cellobiose phosphorylase K21298 E2.4.1.333; 1,2-beta-oligoglucan phosphorylase [EC:2.4.1.333]
D PPM_2906 ypjH; glycosyl transferase, group 1 family protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PPM_0146 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PPM_2047 fosB; metallothiol transferase fosB Fosfomycin resistance protein K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D PPM_0496 yhfQ; fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D PPM_0707 frlD1; PfkB domain protein K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D PPM_1541 frlD3; putative carbohydrate kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D PPM_3121 dhaK; phosphatase, putative K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D PPM_2178 M1_2466; putative phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PPM_p0200 matK; maturase K K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D PPM_4728 yhcK1; putative membrane protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D PPM_4769 yhcK3; putative membrane protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D PPM_4482 yacK; DNA integrity scanning protein disA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D PPM_4410 ybbP; putative protein ybbP K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PPM_0848 M1-1044; UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PPM_2454 ppsA; pyruvate, water dikinase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D PPM_2993 spoIIAB; anti-sigma F factor antagonist K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D PPM_0145 hprK1; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PPM_4485 mcsB; hypothetical protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D PPM_1133 tysT; protein-tyrosine sulfotransferase 2 K01021 TPST; protein-tyrosine sulfotransferase [EC:2.8.2.20]
D PPM_4304 yvfF; putative pyruvyl transferase epsO K19431 epsO; pyruvyl transferase EpsO [EC:2.-.-.-]
D PPM_1755 M1_2019; UPF0189 protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PPM_1181 pnbA; putative carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PPM_4538 xynC; putative esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D PPM_1571 yneP; UPF0670 protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PPM_0049 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D PPM_3143 php; protein trpH K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PPM_3461 ppAX; Pyrophosphatase ppaX K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D PPM_5042 yybT; putative protein yybT K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D PPM_3402 yqfF; putative protein yqfF K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D PPM_0423 M1-591; deoxyribonuclease, TatD family, putative K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PPM_0887 mttC; type V secretory pathway protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PPM_0023 yabD; deoxyribonuclease, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PPM_0025 rnmV; primase-related protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D PPM_1300 eSD; s-formylglutathione hydrolase FGH; Esterase D K07017 besA; ferri-bacillibactin esterase [EC:3.1.-.-]
D PPM_4985 xynB3; xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D PPM_4395 xlnB; endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D PPM_4829 xynA7; endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D PPM_0599 murA1; lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PPM_2374 exoK; endo-beta-1,3-1,4 glucanase (licheninase) K01216 bglS; licheninase [EC:3.2.1.73]
D PPM_3197 ganA; arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D PPM_4814 yxiA5; putative protein YxiA K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PPM_0818 abnA; arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PPM_0319 yxiA1; uncharacterized protein yxiA Flags: Precursor K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PPM_1764 yxiA3; uncharacterized protein yxiA Flags: Precursor K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PPM_4860 aguA; alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D PPM_2561 celZ; endoglucanase Z Endo-1,4-beta-glucanase; Thermoactive cellulase; Avicelase I; Flags: Precursor K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D PPM_0757 yesR1; putative glycosyl hydrolase yteR K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D PPM_0843 yesR3; glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D PPM_4874 yteR; putative glycosyl hydrolase YteR K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D PPM_1796 gaa; lysosomal alpha-glucosidase Gaa K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D PPM_2109 ugl; unsaturated glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D PPM_2422 adp1; serine peptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PPM_4404 adp3; D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PPM_3131 def1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PPM_4303 def3; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PPM_2966 M1_3310; chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_1167 pdaC; polysaccharide deacetylase, putative K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_2575 pdaA; polysaccharide deacetylase, putative K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_1013 cda1; putative deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_1670 nodB1; chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_2449 M1_2762; chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_4875 nodB3; Chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_4169 xynA5; Bifunctional xylanase/deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_3813 cda2; polysaccharide deacetylase, putative K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PPM_2907 ypjG; uncharacterized protein ypjG K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D PPM_0434 M1-604; polysaccharide deacetylase, putative K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D PPM_0519 yhaR; UPF0076 protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PPM_1540 frlB3; sugar isomerase K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D PPM_3464 moxR; putative protein yeaC K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PPM_4632 ywlE; protein-tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D PPM_4270 lcnDR2; Lacticin 481/lactococcin biosynthesis protein K27862 lanM; class II lanthipeptide synthase [EC:3.13.2.4]
D PPM_3585 ydeN; putative hydrolase ydeN K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D PPM_0748 uvsE; UV-endonuclease, putative K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D PPM_3056 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D PPM_0472 yjeF; carbohydrate kinase, yjef like protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PPM_1351 pelB; pectate lyase K01732 E4.2.2.10; pectin lyase [EC:4.2.2.10]
D PPM_0906 M1_1103; FG-GAP repeat-containing protein K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D PPM_0964 yesW; rhamnogalacturonan lyase yesX K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D PPM_1702 ytpB; uncharacterized protein ytpB K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D PPM_4806 rnbP; N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D PPM_0493 frlC1; putative endonuclease 4 K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D PPM_1543 frlC3; fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D PPM_3141 pacL; cation-transporting ATPase, E1-E2 family K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PPM_4281 cadA; putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D PPM_4283 ziaA; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase,heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PPM_0165 crh; phosphocarrier protein HPr Histidine-containing protein K11184 chr; catabolite repression HPr-like protein
D PPM_2163 yvfV; hypothetical protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PPM_2164 yvfW; uncharacterized electron transport protein yvfW K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PPM_2165 yvbY; UPF0707 protein ykgG K00782 lldG; L-lactate dehydrogenase complex protein LldG
D PPM_0495 agaS; glucosamine-fructose-6-phosphateaminotransferase K19510 gfrF; fructoselysine-6-phosphate deglycase
D PPM_3470 yoaJ; Expansin-yoaJ EXLX1 K20628 exlX; expansin
D PPM_3367 yllA; putative protein yllA K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D PPM_0257 yogA; alcohol dehydrogenase, zinc-containing K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D PPM_3504 fdhD; fdhD-like protein K02379 fdhD; FdhD protein
D PPM_1723 fer; ferredoxin fas2 K05337 fer; ferredoxin
D PPM_1517 nifU1; iron sulfur cluster scaffold protein 1 K04488 iscU; nitrogen fixation protein NifU and related proteins
D PPM_4842 firD; Anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D PPM_2836 ykuP; flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
D PPM_3120 degV3; UPF0230 protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D PPM_1435 degV1; UPF0230 protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D PPM_1774 nrdI; protein nrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D PPM_3344 ylmE; Proline synthetase co-transcribed bacterial homolog protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PPM_2997 exoQ; exopolysaccharide production protein exoQ K16567 exoQ; exopolysaccharide production protein ExoQ
D PPM_1696 yrvD; uncharacterized protein yrvD K08992 lapA; lipopolysaccharide assembly protein A
D PPM_1086 ykvT; spore cortex-lytic enzyme SCLE; Flags: Precursor K01449 cwlJ; cell wall hydrolase
D PPM_2529 cwlJ; cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D PPM_4696 ubiB; putative ubiquinone biosynthesis protein ubiB K03688 ubiB; ubiquinone biosynthesis protein
D PPM_2565 mobB3; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D PPM_0651 M1-836; fMN-dependent NADH-azoreductase 3 K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PPM_0240 ydfO1; glyoxylase family protein K15975 K15975; glyoxalase family protein
D PPM_0655 ydfO3; glyoxylase family protein K15975 K15975; glyoxalase family protein
D PPM_4334 ykcA; putative ring-cleaving dioxygenase mhqA K15975 K15975; glyoxalase family protein
D PPM_0239 ydfP; uncharacterized protein yfiD K15977 K15977; putative oxidoreductase
D PPM_2511 yfiD1; uncharacterized protein K15977 K15977; putative oxidoreductase
D PPM_4720 yfiD3; putative protein yfiD K15977 K15977; putative oxidoreductase
D PPM_0812 M1-1006; phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D PPM_0714 yphP; UPF0403 protein K26958 brxA_B; bacilliredoxin
D PPM_3168 ytxJ; uncharacterized protein ytxJ ORF2; ORF3 K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PPM_0320 cspD; cold shock-like protein cspC K03704 cspA; cold shock protein
D PPM_1700 cspB; cold shock-like protein cspB K03704 cspA; cold shock protein
D PPM_4559 cspC; Cold shock-like protein cspC K03704 cspA; cold shock protein
D PPM_1199 yhgF; protein YhgF K06959 tex; protein Tex
D PPM_3136 ylzA; UPF0296 protein K09777 remA; extracellular matrix regulatory protein A
D PPM_0005 yqbO1; hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D PPM_0048 rps1; 40S ribosomal protein S1 K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D PPM_4486 mcsA; putative protein yacH K19411 mcsA; protein arginine kinase activator
D PPM_3911 tig; Trigger factor TF K03545 tig; trigger factor
D PPM_1207 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D PPM_0177 smpB; ssrA-binding protein K03664 smpB; SsrA-binding protein
D PPM_1870 comM; competence protein comM K07391 comM; magnesium chelatase family protein
D PPM_0802 yhfA; protein yhfA K07397 yhfA; putative redox protein
D PPM_3409 yqeZ; putative protein yqeZ K07403 nfeD; membrane-bound serine protease (ClpP class)
D PPM_2964 mecA_2; adapter protein mecA 2 K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D PPM_2171 MGMT; methylated-DNA-protein-cysteinemethyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PPM_3325 hphI; Type-2 restriction enzyme HphI K07454 K07454; putative restriction endonuclease
D PPM_0197 radC1; DNA repair protein radC-like K03630 radC; DNA repair protein RadC
D PPM_3887 radC3; radC-like DNA repair protein K03630 radC; DNA repair protein RadC
D PPM_1866 M1_2136; UPF0102 protein K07460 yraN; putative endonuclease
D PPM_1875 smf; protein smf K04096 smf; DNA processing protein
D PPM_2889 dnaD; DNA replication protein dnaD K02086 dnaD; DNA replication protein
D PPM_2770 xtmA; PBSX phage terminase small subunit K07474 xtmA; phage terminase small subunit
D PPM_2769 pacB; terminase B protein PACase B protein; DNA packaging B protein K06909 xtmB; phage terminase large subunit
D PPM_4124 yusF; putative protein yabF K07476 yusF; toprim domain protein
D PPM_0595 rarA; replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PPM_3838 yrvN; ATPase K07478 ycaJ; putative ATPase
D PPM_0207 M1-364; putative P4-specific DNA primase K06919 K06919; putative DNA primase/helicase
D PPM_0230 orfX1; transposase K07483 K07483; transposase
D PPM_1615 tnpIS3; transposase IS3/IS911 K07483 K07483; transposase
D PPM_1509 orfX3; transposase K07483 K07483; transposase
D PPM_1519 orfX5; transposase K07483 K07483; transposase
D PPM_2713 tnp_orfX; transposase orfX K07483 K07483; transposase
D PPM_2953 tnpIS3C; transposase K07483 K07483; transposase
D PPM_3017 tnpIS3D; transposase K07483 K07483; transposase
D PPM_2097 tnpA1; transposase for insertion sequence element IS1001 K07485 K07485; transposase
D PPM_p0027 pPPM1a_33; transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D PPM_p0178 tnp1; putative transposase K07496 K07496; putative transposase
D PPM_p0293 tnp3; putative transposase K07496 K07496; putative transposase
D PPM_p0295 tnp2; putative transposase K07496 K07496; putative transposase
D PPM_2711 iS1353C; putative transposase for insertion sequence element IS1353 K07497 K07497; putative transposase
D PPM_0229 insK5; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_2617 iS1354; putative transposase for insertion sequence element IS1353 K07497 K07497; putative transposase
D PPM_0276 insK1; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_1614 insK9; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_1510 insK2; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_1520 orfY; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_1531 iS1353; putative transposase for insertion sequence element IS1353 K07497 K07497; putative transposase
D PPM_2714 insK7; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_2952 insK12; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D PPM_p0265 tnpH1721; uncharacterized transposase-like protein K07497 K07497; putative transposase
D PPM_3016 insK4; putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PPM_0246 pspA1; putative membrane-associated 30 kDa protein K03969 pspA; phage shock protein A
D PPM_2573 pspA3; putative membrane-associated 30 kDa protein K03969 pspA; phage shock protein A
D PPM_0139 yaaK; hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PPM_2054 yihO1; uncharacterized symporter yihO K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PPM_2384 yagG; uncharacterized symporter yjmB K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PPM_0850 yifK; uncharacterized transporter ydgF K03293 TC.AAT; amino acid transporter, AAT family
D PPM_3659 yvbW; High-affinity glutamine permease K03293 TC.AAT; amino acid transporter, AAT family
D PPM_2534 yfnA; uncharacterized amino acid permease yfnA K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PPM_3406 yhdG; High-affinity glutamine permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PPM_4596 acrB1; Multidrug resistance protein mdtC Multidrug transporter mdtC K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D PPM_0830 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PPM_4877 M1_5325; Sodium-and chloride-dependent GABA transporter 2 K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PPM_3929 dagA; putative transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PPM_4155 alsT; putative transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PPM_1794 brnQ; branched-chain amino acid transport system 2 carrier protein LIV-II K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PPM_0522 yocS; solute carrier family 10 member 6 Sodium-dependent organic anion transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PPM_0609 ybaS; uncharacterized protein ybaS K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D PPM_3627 scdA; Regulator of cell morphogenesis and NO signaling RCMNS K07322 ytfE; regulator of cell morphogenesis and NO signaling
D PPM_0142 M1-298; hypothetical protein K06317 bofA; inhibitor of the pro-sigma K processing machinery
D PPM_3867 bofC; Protein bofC Bypass-of-forespore protein C K06318 bofC; forespore regulator of the sigma-K checkpoint
D PPM_4036 cgeB1; Protein cgeB K06320 cgeB; spore maturation protein CgeB
D PPM_4037 cgeB2; Protein cgeB2 K06320 cgeB; spore maturation protein CgeB
D PPM_2815 cotE; spore coat protein E K06328 cotE; spore coat protein E
D PPM_1537 cotJB; proteinCotJB K06333 cotJB; spore coat protein JB
D PPM_1538 cotJC; protein CotJC K06334 cotJC; spore coat protein JC
D PPM_4050 ytcC; lipopolysaccharideN-acetylglucosaminyltransferase K06338 cotSA; spore coat protein SA
D PPM_5068 jag; Protein jag SpoIIIJ-associated protein K06346 jag; spoIIIJ-associated protein
D PPM_3868 sec16; COPII coat assembly protein SEC16 K06370 safA; morphogenetic protein associated with SpoVID
D PPM_4088 M1_4495; hypothetical protein K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D PPM_2974 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D PPM_2973 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D PPM_3013 spo0M; sporulation-control protein spo0M K06377 spo0M; sporulation-control protein
D PPM_2994 spoIIAA; anti-sigma F factor antagonist Stage II sporulation protein AA K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D PPM_3890 M1_4285; hypothetical protein K06380 spoIIB; stage II sporulation protein B
D PPM_3002 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D PPM_4415 spoIIM2; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D PPM_3441 spoIIP; Stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D PPM_4610 M1_5046; Peptidase M23 K06386 spoIIQ; stage II sporulation protein Q
D PPM_4635 spoIIR; Stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D PPM_3045 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D PPM_3044 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D PPM_3043 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D PPM_3042 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D PPM_3041 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D PPM_3040 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D PPM_3039 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D PPM_3038 fthfDH; 10-formyltetrahydrofolate dehydrogenase K06397 spoIIIAH; stage III sporulation protein AH
D PPM_2949 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D PPM_3881 spoIVFA; Stage IV sporulation protein FA K06401 spoIVFA; stage IV sporulation protein FA
D PPM_2991 spoVAA; stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D PPM_2990 spoVAB; stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D PPM_3467 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D PPM_3466 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D PPM_3465 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D PPM_2989 gerKA4; spore germination protein KA K06408 spoVAF; stage V sporulation protein AF
D PPM_1942 dapA1; dipicolinate synthase, A subunit K06410 spoVFA; dipicolinate synthase subunit A
D PPM_1943 dapB1; dipicolinate synthase, B subunit K06411 spoVFB; dipicolinate synthase subunit B
D PPM_0032 spoVG; putative septation protein spoVG Stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
D PPM_2805 spoVK; stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D PPM_1414 spoVR; stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D PPM_1966 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D PPM_3894 spoVID; Stage VI sporulation protein D K06417 spoVID; stage VI sporulation protein D
D PPM_1589 sasP; small, acid-soluble spore protein C5 SASP K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D PPM_4127 sasp2; Small, acid-soluble spore protein 2 K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D PPM_1385 M1_1621; hypothetical protein K06422 sspE; small acid-soluble spore protein E (minor gamma-type SASP)
D PPM_0029 sspF; protein sspF K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D PPM_1142 M1_1363; small, acid-soluble spore protein H SASP H K06425 sspH; small acid-soluble spore protein H (minor)
D PPM_4388 sspH; Small, acid-soluble spore protein H SASP H K06425 sspH; small acid-soluble spore protein H (minor)
D PPM_0087 M1-242; hypothetical protein K06433 sspP; small acid-soluble spore protein P (minor)
D PPM_0813 tlp; small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D PPM_0027 yabG; sporulation-specific protease yabG K06436 yabG; spore coat assemly protein
D PPM_3404 yqfD; putative protein yqfD K06438 yqfD; similar to stage IV sporulation protein
D PPM_0703 yraD1; spore coat protein F-like protein yraD K06439 yraD; similar to spore coat protein
D PPM_4948 yraD3; Spore coat protein F-like protein yraD K06439 yraD; similar to spore coat protein
D PPM_4945 yraG3; Spore coat protein F-like protein yraG K06440 yraG; similar to spore coat protein
D PPM_0702 yraG1; spore coat protein F-like protein yraG K06440 yraG; similar to spore coat protein
D PPM_4417 gerD; Spore germination protein gerD K06294 gerD; spore germination protein D
D PPM_0770 gerKA5; spore germination protein KA K06295 gerKA; spore germination protein KA
D PPM_0489 gerKA1; spore germination protein KA K06295 gerKA; spore germination protein KA
D PPM_2294 gerKA2; spore germination protein KA K06295 gerKA; spore germination protein KA
D PPM_2240 grkA; spore germination protein KA K06295 gerKA; spore germination protein KA
D PPM_4727 gerKA7; Spore germination protein KA K06295 gerKA; spore germination protein KA
D PPM_0769 gerAC1; spore germination protein KC K06297 gerKC; spore germination protein KC
D PPM_2239 grkC; spore germination protein KC Flags: Precursor K06297 gerKC; spore germination protein KC
D PPM_2293 gerAC3; spore germination protein KC Flags: Precursor K06297 gerKC; spore germination protein KC
D PPM_4726 gerAC5; Spore germination protein KC K06297 gerKC; spore germination protein KC
D PPM_0488 gerKC; spore germination protein KC K06297 gerKC; spore germination protein KC
D PPM_3959 gerM; Spore germination protein gerM K06298 gerM; germination protein M
D PPM_2528 gerQ; spore coat protein gerQ K06305 gerQ; spore germination protein Q
D PPM_2413 gerKA3; spore germination protein KA K06307 yfkQ; spore germination protein
D PPM_4714 yfkQ; Spore germination protein KA K06307 yfkQ; spore germination protein
D PPM_2411 yfkR1; putative spore germination protein YfkR K06308 yfkR; spore germination protein
D PPM_4713 yfkR3; Spore germination protein KC K06308 yfkR; spore germination protein
D PPM_4712 yfkT; Spore germination protein KB K06309 yfkT; spore germination protein
D PPM_0632 yndD1; spore germination protein KA K06310 yndD; spore germination protein
D PPM_0638 yndD3; spore germination protein KA K06310 yndD; spore germination protein
D PPM_0283 gerA; spore germination protein KA K06310 yndD; spore germination protein
D PPM_0282 yndF1; spore germination protein B3 Flags: Precursor K06312 yndF; spore germination protein
D PPM_0630 yndF3; spore germination protein yndF Flags: Precursor K06312 yndF; spore germination protein
D PPM_0640 yndF5; spore germination protein B3 Flags: Precursor K06312 yndF; spore germination protein
D PPM_2962 ypeB; sporulation protein ypeB PSPA12 K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D PPM_0926 terA; tellurium resistance protein terA K05792 terA; tellurite resistance protein TerA
D PPM_0924 yceE1; uncharacterized protein yceE K05795 terD; tellurium resistance protein TerD
D PPM_0925 yceE2; uncharacterized protein yceE K05795 terD; tellurium resistance protein TerD
D PPM_0923 yceE; uncharacterized protein yceE K05795 terD; tellurium resistance protein TerD
D PPM_3578 yceC; putative protein yceE K05795 terD; tellurium resistance protein TerD
D PPM_3377 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D PPM_3403 phoH3; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PPM_3375 phoH1; PhoH-like protein K07175 phoH2; PhoH-like ATPase
D PPM_1400 prkA; serine protein kinase K07180 prkA; serine protein kinase
D PPM_1718 M1_1979; hypothetical protein K07182 K07182; CBS domain-containing protein
D PPM_1959 yitK; UPF0234 protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PPM_1073 acm1; lysozyme M1 1,4-beta-N-acetylmuramidase M1; Flags: Precursor K07273 acm; lysozyme
D PPM_2623 lyc; N-acetylmuramoyl-L-alanine amidase K07273 acm; lysozyme
D PPM_3247 acm3; Lysozyme M1 K07273 acm; lysozyme
D PPM_2174 hlyD3; UPF0194 membrane protein Precursor K02005 ABC.CD.TX; HlyD family secretion protein
D PPM_4172 hlyD9; UPF0194 membrane protein K02005 ABC.CD.TX; HlyD family secretion protein
D PPM_4595 RNDmfp; RND family efflux transporter Mfp K02005 ABC.CD.TX; HlyD family secretion protein
D PPM_3901 ccsA; Cytochrome c biogenesis protein ccsA K02497 hemX; HemX protein
D PPM_1957 M1_2229; hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D PPM_1583 phoU; phosphate transport system protein phoU K02039 phoU; phosphate transport system protein
D PPM_0922 terB; tellurium resistance protein terB K05793 terB; tellurite resistance protein TerB
D PPM_0810 yvaZ; immunity protein sdpI K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PPM_3077 mviM3; Virulence factor mviM K03810 mviM; virulence factor
D PPM_0944 metRS; methionyl-tRNA synthetase K06878 K06878; tRNA-binding protein
D PPM_4137 trhbO; Hemoglobin-like protein HbO K06886 glbN; hemoglobin
D PPM_3053 M1_3404; Patatin-like phospholipase domain-containing protein K07001 K07001; NTE family protein
D PPM_1275 M1_1504; uncharacterized HAD-hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PPM_1310 M1_1543; uncharacterized HAD-hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PPM_2590 yjcH1; uncharacterized HAD-hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PPM_1518 yurU1; UPF0051 protein ycf24 K09014 sufB; Fe-S cluster assembly protein SufB
D PPM_4197 yurU3; UPF0051 protein K09014 sufB; Fe-S cluster assembly protein SufB
D PPM_1515 yurX; UPF0051 protein ycf24 K09015 sufD; Fe-S cluster assembly protein SufD
D PPM_4198 sufD; UPF0051 protein K09015 sufD; Fe-S cluster assembly protein SufD
D PPM_4126 yfhP; hypothetical protein K07038 K07038; inner membrane protein
D PPM_3469 M1_3837; putative membrane-associated metal-binding protein K07038 K07038; inner membrane protein
D PPM_1572 ytzA; UPF0716 protein ytzA K07113 fxsA; UPF0716 protein FxsA
D PPM_2207 ybfQ; UPF0176 protein K07146 K07146; UPF0176 protein
D PPM_0847 phnB1; protein phnB K04750 phnB; PhnB protein
D PPM_0507 phnB5; protein phnB K04750 phnB; PhnB protein
D PPM_1769 phnB2; protein phnB K04750 phnB; PhnB protein
D PPM_2234 phnB7; protein PhnB K04750 phnB; PhnB protein
D PPM_3690 M1_4074; hypothetical protein K04750 phnB; PhnB protein
D PPM_1200 ydcK; sprT-like protein K03095 sprL; SprT-like protein
D PPM_1285 dedA3; Golgi apparatus membrane protein K03975 dedA; membrane-associated protein
D PPM_2074 pip; uncharacterized protein yhgE ORFB K01421 yhgE; putative membrane protein
D PPM_1356 M1_1591; hypothetical protein K08972 K08972; putative membrane protein
D PPM_0361 M1-525; uncharacterized 21.0 kDa protein in ctaF 3'region ORF1 K08976 K08976; putative membrane protein
D PPM_1783 yjdF1; inner membrane protein yjdF K08984 yjdF; putative membrane protein
D PPM_2134 ycgQ; UPF0703 protein ycgQ K08986 ycgQ; putative membrane protein
D PPM_0297 ypaA; integral membrane protein K08987 K08987; putative membrane protein
D PPM_0537 yshE1; UPF0719 transmembrane protein yshE K08989 K08989; putative membrane protein
D PPM_1358 yshE3; UPF0719 transmembrane protein yshE K08989 K08989; putative membrane protein
D PPM_0649 psiE; psiE-like protein K13256 psiE; protein PsiE
D PPM_4966 phnA; phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D PPM_3704 M1_4091; Ankyrin repeat-rich membrane spanning protein K06867 K06867; uncharacterized protein
D PPM_3923 M1_4319; Ribosomal RNA large subunit methyltransferase N EC K06871 K06871; uncharacterized protein
D PPM_3926 M1_4322; Ribosomal RNA large subunit methyltransferase K06871 K06871; uncharacterized protein
D PPM_4325 ydeM3; ydeM-like anaerobic sulfatase-maturating enzyme K06871 K06871; uncharacterized protein
D PPM_3262 M1_3622; Molybdenum cofactor biosynthesis protein A K06871 K06871; uncharacterized protein
D PPM_0248 ydjH; UPF0603 protein ydjH Flags: Precursor K06872 K06872; uncharacterized protein
D PPM_4853 gsiB3; Glucose starvation-inducible protein B General stress protein B K06884 K06884; uncharacterized protein
D PPM_3811 gsiB1; Glucose starvation-inducible protein B General stress protein B K06884 K06884; uncharacterized protein
D PPM_0022 ywfO; metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D PPM_2265 yyaL; hypothetical protein K06888 K06888; uncharacterized protein
D PPM_0824 yfhR3; uncharacterized protein yfhR K06889 K06889; uncharacterized protein
D PPM_1591 M1_1841; hypothetical protein K06889 K06889; uncharacterized protein
D PPM_2259 M1_2554; alpha beta hydrolase K06889 K06889; uncharacterized protein
D PPM_0739 yfhR1; uncharacterized protein yfhR K06889 K06889; uncharacterized protein
D PPM_2215 yesE; phenazine biosynthesis protein phzB 1 K06893 K06893; uncharacterized protein
D PPM_3173 yneT; uncharacterized protein yneT K06929 K06929; uncharacterized protein
D PPM_3753 M1_4145; UPF0153 protein K06940 K06940; uncharacterized protein
D PPM_1296 ypgQ; uncharacterized protein YpgQ K06950 K06950; uncharacterized protein
D PPM_1267 yhcL; L-cystine uptake protein tcyP Transporter of cystine tcyP K06956 K06956; uncharacterized protein
D PPM_1857 M1_2127; UPF0109 protein K06960 K06960; uncharacterized protein
D PPM_4472 yacP; putative protein yacP K06962 K06962; uncharacterized protein
D PPM_1715 yugP; hypothetical protein K06973 K06973; uncharacterized protein
D PPM_0360 yjdJ; uncharacterized protein yjdJ K06975 K06975; uncharacterized protein
D PPM_2200 M1_2491; hypothetical protein K06987 K06987; uncharacterized protein
D PPM_0671 nimA; protease synthase and sporulation protein PAI 2 K07005 K07005; uncharacterized protein
D PPM_3518 M1_3888; hypothetical protein K07032 K07032; uncharacterized protein
D PPM_4940 M1_5389; putative membrane protein K07034 K07034; uncharacterized protein
D PPM_3092 M1_3445; hypothetical protein K07045 K07045; uncharacterized protein
D PPM_p0272 ypzJ; uncharacterized protein K07069 K07069; uncharacterized protein
D PPM_1236 yfhF; UPF0105 protein K07071 K07071; uncharacterized protein
D PPM_0884 ycgL; uncharacterized protein ycgL K07074 K07074; uncharacterized protein
D PPM_2032 M1_2313; fatty acid repression mutant protein 2 K07078 K07078; uncharacterized protein
D PPM_2135 ycgR; UPF0718 protein ycgR K07089 K07089; uncharacterized protein
D PPM_2029 M1_2310; putative metallophosphoesterase K07095 K07095; uncharacterized protein
D PPM_2222 yfcE; phosphodiesterase yfcE K07095 K07095; uncharacterized protein
D PPM_4068 ykuE; putative metallophosphoesterase K07098 K07098; uncharacterized protein
D PPM_2187 yrxA; uncharacterized protein yrxA ORF1 K07105 K07105; uncharacterized protein
D PPM_0471 M1-643; NADPH-flavin reductase K07118 K07118; uncharacterized protein
D PPM_4778 ycf39; putative protein ycf39 K07118 K07118; uncharacterized protein
D PPM_3964 yheG; Flavin reductase FR K07118 K07118; uncharacterized protein
D PPM_3962 dltE3; putative dehydrogenase K07124 K07124; uncharacterized protein
D PPM_4059 yqjQ; oxidoreductase, short-chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein
D PPM_1327 ytqA; elongator complex protein 3 Gamma-toxin target 3 K07139 K07139; uncharacterized protein
D PPM_2336 yyaS; uncharacterized protein yyaS K07149 K07149; uncharacterized protein
D PPM_3059 ytjA; UPF0161 protein K08998 K08998; uncharacterized protein
D PPM_3410 M1_3776; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K09117 K09117; uncharacterized protein
D PPM_2807 M1_3147; UPF0374 protein K09145 K09145; uncharacterized protein
D PPM_0579 yqfA1; hypothetical protein K09155 K09155; uncharacterized protein
D PPM_1758 yjl217W; hypothetical protein K09702 K09702; uncharacterized protein
D PPM_2324 M1_2624; uncharacterized protein (DUF1349) K09702 K09702; uncharacterized protein
D PPM_0400 hypothetical protein K09705 K09705; uncharacterized protein
D PPM_1913 M1_2183; protein of unknown function DUF342 K09749 K09749; uncharacterized protein
D PPM_1727 ypuF; uncharacterized protein ypuF K09763 K09763; uncharacterized protein
D PPM_4136 M1_4545; hypothetical protein K09766 K09766; uncharacterized protein
D PPM_3395 yqxD; UPF0178 protein K09768 K09768; uncharacterized protein
D PPM_0015 yaaR; uncharacterized protein yaaR K09770 K09770; uncharacterized protein
D PPM_1415 yhbH; stress response UPF0229 protein yhbH K09786 K09786; uncharacterized protein
D PPM_1854 yofM; UPF0122 protein K09787 K09787; uncharacterized protein
D PPM_4117 yqgC; putative protein yqgC K09793 K09793; uncharacterized protein
D PPM_1741 M1_2005; hypothetical protein K09798 K09798; uncharacterized protein
D PPM_0166 bp26; 26 kDa periplasmic immunogenic protein K09807 K09807; uncharacterized protein
D PPM_3454 yitL; Conserved virulence factor B K00243 K00243; uncharacterized protein
D PPM_3598 cbrC; UPF0167 protein K09925 K09925; uncharacterized protein
D PPM_0260 M1-419; DUF1680 domain containing protein K09955 K09955; uncharacterized protein
D PPM_0254 hypothetical protein K09955 K09955; uncharacterized protein
D PPM_1815 M1_2082; protein of unknown function DUF925, bacterial K09962 K09962; uncharacterized protein
D PPM_0735 M1-926; hypothetical protein K09976 K09976; uncharacterized protein
D PPM_2470 M1_2786; hypothetical protein K09992 K09992; uncharacterized protein
D PPM_4698 M1_5138; hypothetical protein K09992 K09992; uncharacterized protein
D PPM_1819 ydhG; hypothetical protein K05937 K05937; uncharacterized protein
D PPM_3877 ysxB; putative protein ysxB K07584 ysxB; uncharacterized protein
D PPM_0829 ykaA; UPF0111 protein K07220 K07220; uncharacterized protein
D PPM_1930 ylxR; uncharacterized protein YlxR K07742 ylxR; uncharacterized protein
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#Last updated: October 30, 2024