+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Pollicipes pollicipes (gooseneck barnacle)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        119103099 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        119094897 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        119103866 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        119111529 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        119111855 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        119111916 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        119098054 DNA-directed RNA polymerase II subunit RPB3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        119104876 DNA-directed RNA polymerase II subunit RPB11-like	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        119089555 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit Rpb4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        119106066 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        119107694 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        119093426 DNA-directed RNA polymerase II subunit RPB9-like	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        119108664 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        119108714 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        119098538 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        119112519 transcription initiation factor IIA subunit 2-like isoform X1	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        119099976 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        119100984 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        119090582 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119093938 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119093939 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119105314 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119109153 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        119106139 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        119111622 transcription initiation factor TFIID subunit 3-like	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        119096694 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        119109115 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        119106211 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119106220 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119110411 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        119094096 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        119100917 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119101235 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119107968 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        119108682 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        119096910 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        119097604 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        119091876 transcription initiation factor TFIID subunit 11-like isoform X1	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        119100738 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        119101826 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        119111459 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        119100986 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        119101197 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        119090717 LOW QUALITY PROTEIN: general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        119108588 general transcription factor IIF subunit 1-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        119097588 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        119099112 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        119091942 general transcription factor IIH subunit 1-like	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        119098808 general transcription factor IIH subunit 2-like isoform X1	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        119109196 general transcription factor IIH subunit 3-like	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        119096821 general transcription and DNA repair factor IIH helicase subunit XPB-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        119093181 LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPD-like	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        119093685 general transcription and DNA repair factor IIH helicase subunit XPD-like	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        119110418 cyclin-dependent kinase 7-like isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        119110419 cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        119102572 CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        119105891 cyclin-H-like isoform X1	K06634 CCNH; cyclin H 
E        119106478 cyclin-H-like isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        119093100 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        119094344 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        119112225 mediator of RNA polymerase II transcription subunit 8-like	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        119096332 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        119109406 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        119110106 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        119114862 mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        119090272 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        119090277 mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        119111936 mediator of RNA polymerase II transcription subunit 19-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        119097447 mediator of RNA polymerase II transcription subunit 20-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        119097831 mediator of RNA polymerase II transcription subunit 20-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        119101616 mediator of RNA polymerase II transcription subunit 22-like isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        119101617 mediator of RNA polymerase II transcription subunit 22-like isoform X1	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        119112705 mediator of RNA polymerase II transcription subunit 29-like	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        119104917 mediator of RNA polymerase II transcription subunit 30-like	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        119097041 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        119107652 mediator of RNA polymerase II transcription subunit 7-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        119105718 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        119100860 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        119101053 mediator of RNA polymerase II transcription subunit 21-like isoform X1	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        119114821 mediator of RNA polymerase II transcription subunit 31-A-like	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        119100171 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        119099826 mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        119111148 mediator of RNA polymerase II transcription subunit 16-like	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        119100492 LOW QUALITY PROTEIN: cyclin-dependent kinase 8-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        119100930 cyclin-dependent kinase 8-like isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        119100933 cyclin-dependent kinase 8-like isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        119097042 cyclin-C-like	K15161 CCNC; cyclin-C 
E        119109626 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        119111730 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        119109119 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        119110380 mediator of RNA polymerase II transcription subunit 23-like isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        119096434 mediator of RNA polymerase II transcription subunit 24-like	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        119107384 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        119112598 mediator of RNA polymerase II transcription subunit 26-like isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        119112824 mediator of RNA polymerase II transcription subunit 26-like isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        119109429 mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        119110265 mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
E        119101220 mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        119096764 histone acetyltransferase KAT2B-like isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        119096772 histone acetyltransferase KAT2A-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        119097522 LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        119095099 uncharacterized protein LOC119095099	K11313 SUPT3H; transcription initiation protein SPT3 
E        119110623 transcriptional adapter 2-beta-like	K15127 TADA2B; transcriptional adapter 2-beta 
E        119091354 transcriptional adapter 3-B-like isoform X1	K11315 TADA3; transcriptional adapter 3 
E        119091359 transcriptional adapter 3-B-like	K11315 TADA3; transcriptional adapter 3 
E        119092351 transcriptional adapter 3-like	K11315 TADA3; transcriptional adapter 3 
E        119106139 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        119096694 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        119109115 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        119106211 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119106220 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119110411 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        119094096 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        119100917 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119101235 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119096910 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        119097604 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        119100738 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        119101826 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        119108942 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        119109639 SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        119109686 SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        119107733 STAGA complex 65 subunit gamma-like	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        119094993 chromodomain-helicase-DNA-binding protein 1-like	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        119094994 chromodomain-helicase-DNA-binding protein 1-like	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        119113190 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        119113829 ubiquitin carboxyl-terminal hydrolase 22-like	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        119114915 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
E        119090658 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        119108120 ATP-dependent helicase brm-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        119091232 ATP-dependent helicase brm-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        119099085 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        119099345 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        119112583 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        119100672 SWI/SNF complex subunit SMARCC2-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        119096755 brahma-associated protein of 60 kDa-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        119096756 brahma-associated protein of 60 kDa-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        119106912 LOW QUALITY PROTEIN: brahma-associated protein of 60 kDa-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        119099633 brahma-associated protein of 60 kDa-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        119111621 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        119113851 actin, clone 403	K05692 ACTB_G1; actin beta/gamma 1 
E        119114250 actin, clone 403	K05692 ACTB_G1; actin beta/gamma 1 
E        119101380 actin-85C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        119113764 actin, clone 403	K05692 ACTB_G1; actin beta/gamma 1 
E        119089438 actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        119100146 trithorax group protein osa-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        119108418 AT-rich interactive domain-containing protein 2-like	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        119100379 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
E        119100381 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        119099085 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        119099345 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        119112583 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        119101116 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        119101202 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        119092716 cell division cycle and apoptosis regulator protein 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        119092780 LOW QUALITY PROTEIN: cell division cycle and apoptosis regulator protein 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        119092866 cell division cycle and apoptosis regulator protein 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        119112884 transcription elongation factor S-II-like isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        119089536 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        119089436 LOW QUALITY PROTEIN: transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
E        119089806 transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        119093786 transcription termination factor 2-like isoform X1	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        119092507 uncharacterized protein LOC119092507	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        119106105 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        119106120 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        119101170 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        119102883 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        119113859 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        119113934 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        119114325 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        119106130 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        119098586 serine/threonine-protein phosphatase alpha-2 isoform-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        119093171 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        119113173 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        119108455 symplekin-like	K06100 SYMPK; symplekin 
E        119090925 symplekin-like	K06100 SYMPK; symplekin 
E        119094856 LOW QUALITY PROTEIN: symplekin-like	K06100 SYMPK; symplekin 
E        119096418 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        119106505 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        119111963 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        119095296 decapping and exoribonuclease protein-like isoform X1	K14845 RAI1; RAT1-interacting protein 
E        119110338 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        119096446 protein no-on-transient A-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        119101612 hrp65 protein-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        119100194 SR-related and CTD-associated factor 8-like	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        119099975 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like isoform X1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
E        119099978 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        119101027 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        119103709 LOW QUALITY PROTEIN: parafibromin-like	K15175 CDC73; parafibromin 
E        119093349 LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        119098377 another transcription unit protein-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        119099289 another transcription unit protein-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        119109100 RNA polymerase-associated protein RTF1 homolog isoform X1	K15178 RTF1; RNA polymerase-associated protein RTF1 
E        119112976 RNA polymerase-associated protein RTF1 homolog isoform X1	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        119097756 negative elongation factor A-like isoform X1	K15179 WHSC2; negative elongation factor A 
E        119097768 negative elongation factor A-like	K15179 WHSC2; negative elongation factor A 
E        119100560 LOW QUALITY PROTEIN: negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        119101636 LOW QUALITY PROTEIN: negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        119106417 negative elongation factor D-like	K15181 TH1L; negative elongation factor C/D 
E        119103629 negative elongation factor E-like	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        119098994 protein enabled homolog	K15185 AFF4; AF4/FMR2 family member 4 
E        119099862 protein ENL-like isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        119111379 cyclin-T-like	K15188 CCNT; cyclin T 
E        119111380 cyclin-T-like	K15188 CCNT; cyclin T 
E        119112881 LOW QUALITY PROTEIN: cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
E        119111379 cyclin-T-like	K15188 CCNT; cyclin T 
E        119111380 cyclin-T-like	K15188 CCNT; cyclin T 
E        119112881 LOW QUALITY PROTEIN: cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        119089625 protein HEXIM2-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        119089664 protein HEXIM2-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        119090105 protein HEXIM2-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        119109402 protein HEXIM2-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        119106009 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        119098273 probable RNA methyltransferase Y17G7B.18	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        119098777 la-related protein 7-like	K15191 LARP7; La-related protein 7 
E        119111379 cyclin-T-like	K15188 CCNT; cyclin T 
E        119111380 cyclin-T-like	K15188 CCNT; cyclin T 
E        119112881 LOW QUALITY PROTEIN: cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        119102740 TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        119102741 LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        119098617 translation initiation factor IF-2-like	K21752 DRAP1; Dr1-associated corepressor 
E        119105411 RNA polymerase II subunit A C-terminal domain phosphatase-like	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        119105417 RNA polymerase II subunit A C-terminal domain phosphatase-like	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        119106111 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        119106221 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        119098800 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        119114961 uncharacterized protein LOC119114961	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        119100665 putative RNA polymerase II subunit B1 CTD phosphatase rpap2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        119094411 cyclin-K-like	K23326 CCNK; cyclin K 
E        119101419 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
E        119111876 GPN-loop GTPase 1-like isoform X1	K24104 GPN; GPN-loop GTPase 
E        119111877 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        119104493 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        119099848 DNA-directed RNA polymerase III subunit RPC2-like	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        119101427 DNA-directed RNA polymerase III subunit RPC2-like	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        119096060 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
D      Pol III specific subunits
E        119108841 DNA-directed RNA polymerase III subunit RPC3-like isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        119102818 DNA-directed RNA polymerase III subunit RPC3-like	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        119104585 uncharacterized protein LOC119104585	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        119104605 uncharacterized protein LOC119104605	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        119095870 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        119095874 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        119105492 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        119107120 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        119108412 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        119097792 DNA-directed RNA polymerase III subunit RPC8-like isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        119097797 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        119112653 DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        119103266 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        119103413 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        119108664 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        119108714 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
E        119090582 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119093938 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119093939 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119105314 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119100854 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        119100880 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
D      TFIIIC
E        119091972 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        119099427 uncharacterized protein LOC119099427 isoform X1	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        119103853 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        119100181 general transcription factor 3C polypeptide 6-like	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        119103853 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        119091972 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        119098353 snRNA-activating protein complex subunit 1-like	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        119103843 uncharacterized protein LOC119103843	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        119100533 uncharacterized protein LOC119100533	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
D      Octamer transcription factors
E        119099927 protein nubbin-like	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        119092167 zinc finger protein 76-like	K20828 ZNF143_76; zinc finger protein 143/76 
E        119102084 zinc finger protein 76-like	K20828 ZNF143_76; zinc finger protein 143/76 
E        119105738 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        119113038 DNA-directed RNA polymerase I subunit RPA1-like	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        119098446 DNA-directed RNA polymerase I subunit RPA2-like	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        119096060 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
D      Pol I specific subunits
E        119091317 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        119092008 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
D      Pol I, II, III common subunits
E        119108664 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        119108714 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
C    Basal transcription factors
D      SL1/TIF-1B
E        119090582 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119093938 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119093939 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119105314 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119105907 uncharacterized protein LOC119105907	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
C    Other transcription-related factors
D      UBF
E        119090218 nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        119109931 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        119109933 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        119089536 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        119107782 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
E        119099958 nucleolar protein dao-5-like	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        119099976 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
E        119100984 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        119100986 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        119101197 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024