+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Physcomitrium patens (spreading earthmoss)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        112275541 mRNA cap guanine-N(7) methyltransferase 1 isoform X1	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        112283864 uncharacterized protein	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        112290062 cyclin-dependent kinase D-2 isoform X2	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        112290977 cyclin-dependent kinase D-1 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        112294932 cyclin-dependent kinase D-2 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
D      Cap binding complex
E        112282360 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        112283850 nuclear cap-binding protein subunit 1	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        112294454 uncharacterized protein	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        112285835 pre-mRNA cleavage factor Im 25 kDa subunit 2	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        112285081 uncharacterized protein	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
E        112288940 uncharacterized protein	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        112273924 protein CLP1 homolog	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        112293458 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        112293550 polyadenylation and cleavage factor homolog 4	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        112288256 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        112286991 cleavage and polyadenylation specificity factor subunit 2 isoform X1	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        112282644 cleavage and polyadenylation specificity factor subunit 3-I isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        112284035 cleavage and polyadenylation specificity factor subunit 3-I isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        112273394 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        112293796 flowering time control protein FY isoform X2	K15542 PFS2; polyadenylation factor subunit 2 
E        112273859 protein ANTHESIS POMOTING FACTOR 1	K14962 WDR82; COMPASS component SWD2 
E        112296112 protein ANTHESIS POMOTING FACTOR 1	K14962 WDR82; COMPASS component SWD2 
E        112278913 serine/threonine-protein phosphatase PP1 isozyme 1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112284632 serine/threonine-protein phosphatase PP1 isozyme 1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112284700 serine/threonine-protein phosphatase PP1 isozyme 1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112288243 serine/threonine-protein phosphatase PP1 isozyme 1 isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        112276226 uncharacterized protein	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        112276845 uncharacterized protein isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        112285326 uncharacterized protein	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        112295157 cleavage stimulation factor subunit 50 isoform X2	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        112291276 cleavage stimulating factor 64 isoform X1	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        112280460 cleavage stimulation factor subunit 77 isoform X2	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        112277347 uncharacterized protein isoform X1	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        112280202 uncharacterized protein	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        112280203 uncharacterized protein	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        112280590 uncharacterized protein	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        112274841 small nuclear ribonucleoprotein SmD3b isoform X1	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        112287486 uncharacterized protein isoform X1	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        112294966 small nuclear ribonucleoprotein SmD3b	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        112294967 small nuclear ribonucleoprotein SmD3b	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        112294975 small nuclear ribonucleoprotein SmD3b	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        112291526 uncharacterized protein	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        112292594 uncharacterized protein	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        112281339 probable small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        112289349 probable small nuclear ribonucleoprotein F	K11098 SNRPF; small nuclear ribonucleoprotein F 
E        112274141 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        112282186 probable small nuclear ribonucleoprotein G	K11099 SNRPG; small nuclear ribonucleoprotein G 
E        112286991 cleavage and polyadenylation specificity factor subunit 2 isoform X1	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        112282644 cleavage and polyadenylation specificity factor subunit 3-I isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        112284035 cleavage and polyadenylation specificity factor subunit 3-I isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        112291276 cleavage stimulating factor 64 isoform X1	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        112277347 uncharacterized protein isoform X1	K06100 SYMPK; symplekin 
E        112291903 uncharacterized protein	K18710 SLBP; histone RNA hairpin-binding protein 
D      DRB sensitivity inducing factor (DSIF) complex
E        112283203 transcription elongation factor SPT4 homolog 2	K15171 SUPT4H1; transcription elongation factor SPT4 
E        112277515 putative transcription elongation factor SPT5 homolog 1	K15172 SUPT5H; transcription elongation factor SPT5 
E        112293743 putative transcription elongation factor SPT5 homolog 1 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        112289060 probable N(6)-adenosine-methyltransferase MT-A70-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        112282262 uncharacterized protein isoform X1	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        112283558 uncharacterized protein	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        112285489 uncharacterized protein isoform X3	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        112286135 FKBP12-interacting protein of 37 kDa	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        112273492 uncharacterized protein	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
E        112275645 uncharacterized protein	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
E        112285822 uncharacterized protein isoform X2	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        112274106 nuclear poly(A) polymerase 1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        112295518 nuclear poly(A) polymerase 1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        112278829 zinc finger CCCH domain-containing protein 27 isoform X2	K13192 RBM26; RNA-binding protein 26 
E        112279112 zinc finger CCCH domain-containing protein 27 isoform X1	K13192 RBM26; RNA-binding protein 26 
E        112283724 zinc finger CCCH domain-containing protein 27	K13192 RBM26; RNA-binding protein 26 
E        112284972 zinc finger CCCH domain-containing protein 27	K13192 RBM26; RNA-binding protein 26 
C    Other processing factors
D      112276639 KIN17-like protein	K13102 KIN; DNA/RNA-binding protein KIN17 
D      112293367 uncharacterized protein	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      112277410 serrate RNA effector molecule isoform X1	K27103 SRRT; serrate RNA effector molecule 
D      112293593 serrate RNA effector molecule isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        112284639 RNA-binding protein Y14	K12876 RBM8A; RNA-binding protein 8A 
E        112288278 RNA-binding protein Y14A	K12876 RBM8A; RNA-binding protein 8A 
E        112275078 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        112294128 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        112277478 THO complex subunit 4A isoform X1	K12881 THOC4; THO complex subunit 4 
E        112282936 THO complex subunit 4B	K12881 THOC4; THO complex subunit 4 
E        112283231 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        112293161 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        112284780 DEAD-box ATP-dependent RNA helicase 15 isoform X1	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        112288679 DEAD-box ATP-dependent RNA helicase 15 isoform X1	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        112272841 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        112275368 eukaryotic initiation factor 4A-3 isoform X1	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        112291084 histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        112291065 uncharacterized protein isoform X1	K13114 PNN; pinin 
E        112294887 uncharacterized protein isoform X1	K13114 PNN; pinin 
E        112286216 uncharacterized protein	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        112292409 uncharacterized protein	K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus 
E        112285607 uncharacterized protein isoform X1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        112289936 uncharacterized protein isoform X1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        112279963 uncharacterized protein isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
E        112287530 uncharacterized protein isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        112278897 THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        112288566 THO complex subunit 2 isoform X1	K12879 THOC2; THO complex subunit 2 
E        112292071 THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        112277478 THO complex subunit 4A isoform X1	K12881 THOC4; THO complex subunit 4 
E        112282936 THO complex subunit 4B	K12881 THOC4; THO complex subunit 4 
E        112283231 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        112293161 THO complex subunit 4A	K12881 THOC4; THO complex subunit 4 
E        112284712 THO complex subunit 5A isoform X1	K13174 THOC5; THO complex subunit 5 
E        112292091 THO complex subunit 7A	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        112294060 enhanced ethylene response protein 5	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        112273972 protein DELETION OF SUV3 SUPPRESSOR 1(I)	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        112275622 protein DELETION OF SUV3 SUPPRESSOR 1(I)	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        112281742 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        112286159 uncharacterized protein isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        112289454 uncharacterized protein isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        112294344 caltractin isoform X1	K16466 CETN3; centrin-3 
E        112274396 SAC3 family protein C	K23719 SAC3; nuclear mRNA export protein SAC3 
E        112279942 SAC3 family protein B	K23719 SAC3; nuclear mRNA export protein SAC3 
E        112295972 SAC3 family protein C	K23719 SAC3; nuclear mRNA export protein SAC3 
D      Nuclear pore complex
E        112285301 nuclear-pore anchor isoform X1	K09291 TPR; nucleoprotein TPR 
E        112295459 protein RAE1 isoform X1	K14298 RAE1; mRNA export factor 
E        112274672 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        112275197 protein transport protein SEC13 homolog A	K14004 SEC13; protein transport protein SEC13 
E        112295685 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        112295713 protein transport protein SEC13 homolog B	K14004 SEC13; protein transport protein SEC13 
E        112292977 nuclear pore complex protein NUP85 isoform X1	K14304 NUP85; nuclear pore complex protein Nup85 
E        112283179 nuclear pore complex protein NUP43 isoform X1	K14305 NUP43; nuclear pore complex protein Nup43 
E        112287204 nuclear pore complex protein NUP54	K14308 NUP54; nuclear pore complex protein Nup54 
E        112290942 nuclear pore complex protein NUP54	K14308 NUP54; nuclear pore complex protein Nup54 
E        112292494 uncharacterized protein	K14306 NUP62; nuclear pore complex protein Nup62 
E        112284039 nuclear pore complex protein NUP88	K14318 NUP88; nuclear pore complex protein Nup88 
E        112283147 nuclear pore complex protein NUP93A	K14309 NUP93; nuclear pore complex protein Nup93 
E        112277903 nuclear pore complex protein NUP96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        112278008 nuclear pore complex protein NUP96	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        112280021 nuclear pore complex protein NUP98A	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        112285724 nuclear pore complex protein NUP107	K14301 NUP107; nuclear pore complex protein Nup107 
E        112274272 nuclear pore complex protein NUP133 isoform X1	K14300 NUP133; nuclear pore complex protein Nup133 
E        112282444 uncharacterized protein	K14311 NUP188; nuclear pore complex protein Nup188 
E        112285760 nuclear pore complex protein NUP155	K14312 NUP155; nuclear pore complex protein Nup155 
E        112282449 nuclear pore complex protein NUP35	K14313 NUP35; nuclear pore complex protein Nup53 
E        112283795 nuclear pore complex protein NUP35	K14313 NUP35; nuclear pore complex protein Nup53 
E        112273604 uncharacterized protein	K14310 NUP205; nuclear pore complex protein Nup205 
E        112276019 uncharacterized protein isoform X1	K14310 NUP205; nuclear pore complex protein Nup205 
E        112281496 nuclear pore complex protein NUP205	K14310 NUP205; nuclear pore complex protein Nup205 
E        112278345 nuclear pore complex protein GP210 isoform X1	K14314 NUP210; nuclear pore complex protein Nup210 
E        112290479 nuclear pore complex protein NUP214 isoform X1	K14317 NUP214; nuclear pore complex protein Nup214 
E        112276728 nuclear pore complex protein NUP58 isoform X1	K14307 NUPL1; nucleoporin p58/p45 
E        112284751 zinc finger CCCH domain-containing protein 46	K14321 NUPL2; nucleoporin-like protein 2 
E        112275910 uncharacterized protein	K14315 NDC1; nucleoporin NDC1 
E        112282122 protein SEH1	K14299 SEH1; nucleoporin SEH1 
E        112288219 aladin	K14320 AAAS; aladin 
E        112294344 caltractin isoform X1	K16466 CETN3; centrin-3 
E        112286319 mRNA export factor GLE1	K18723 GLE1; nucleoporin GLE1 
D      Ran-mediated transport factors
E        112273483 GTP-binding nuclear protein Ran1A	K07936 RAN; GTP-binding nuclear protein Ran 
E        112273699 GTP-binding nuclear protein Ran1A	K07936 RAN; GTP-binding nuclear protein Ran 
E        112276126 GTP-binding nuclear protein Ran1A	K07936 RAN; GTP-binding nuclear protein Ran 
E        112276192 GTP-binding nuclear protein Ran1A	K07936 RAN; GTP-binding nuclear protein Ran 
E        112286279 GTP-binding nuclear protein Ran1A	K07936 RAN; GTP-binding nuclear protein Ran 
E        112292292 GTP-binding nuclear protein Ran1B	K07936 RAN; GTP-binding nuclear protein Ran 
E        112281681 plant UBX domain-containing protein 10	K18726 FAF2; FAS-associated factor 2 
E        112286440 plant UBX domain-containing protein 10 isoform X1	K18726 FAF2; FAS-associated factor 2 
E        112292596 plant UBX domain-containing protein 10	K18726 FAF2; FAS-associated factor 2 
E        112278066 cell division control protein 48 homolog A	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        112279895 cell division control protein 48 homolog A	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        112281230 cell division control protein 48 homolog A	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        112286283 cell division control protein 48 homolog A isoform X1	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        112290658 cell division control protein 48 homolog A	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        112292443 cell division control protein 48 homolog A	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        112277710 uncharacterized protein	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        112282113 uncharacterized protein	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        112287271 uncharacterized protein	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        112285513 protein EXPORTIN 1A isoform X1	K14290 XPO1; exportin-1 
E        112287230 protein EXPORTIN 1A	K14290 XPO1; exportin-1 
E        112282334 uncharacterized protein	K18460 XPO7; exportin-7 
E        112282950 uncharacterized protein	K18460 XPO7; exportin-7 
E        112284184 RAN GTPase-activating protein 2	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        112288719 RAN GTPase-activating protein 2	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        112278834 nuclear transport factor 2B	K28773 NUTF2; nuclear transport factor 2 
E        112285179 nuclear transport factor 2A	K28773 NUTF2; nuclear transport factor 2 
E        112288457 nuclear transport factor 2B	K28773 NUTF2; nuclear transport factor 2 
D      eIF4F and regulatory proteins
E        112278028 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        112281215 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        112281589 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        112283410 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        112289123 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        112293413 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        112278667 eukaryotic initiation factor 4A-10	K03257 EIF4A; translation initiation factor 4A 
E        112282558 eukaryotic initiation factor 4A-9 isoform X2	K03257 EIF4A; translation initiation factor 4A 
E        112283465 eukaryotic initiation factor 4A-10	K03257 EIF4A; translation initiation factor 4A 
E        112284369 eukaryotic initiation factor 4A-9	K03257 EIF4A; translation initiation factor 4A 
E        112288735 eukaryotic initiation factor 4A-15 isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        112289778 ATP-dependent RNA helicase eIF4A isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        112280190 uncharacterized protein isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        112280367 uncharacterized protein	K03260 EIF4G; translation initiation factor 4G 
E        112291114 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112291810 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112294551 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112294647 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112294669 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112279793 eukaryotic translation initiation factor 4B2 isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        112274313 protein PIR isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        112275947 protein PIR isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        112286305 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112291511 DEAD-box ATP-dependent RNA helicase 11	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112293260 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112294421 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112288089 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112289998 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112291280 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112293323 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112273341 DExH-box ATP-dependent RNA helicase DExH11	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        112277449 uncharacterized protein	K07575 MCTS; malignant T-cell-amplified sequence 
E        112287332 translation machinery-associated protein 22 isoform X1	K24272 DENR; density-regulated protein 
E        112289730 translation machinery-associated protein 22	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
D      Other transport factors
E        112281490 partner of Y14 and mago	K14294 WIBG; partner of Y14 and mago 
E        112277793 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112277883 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112281686 uncharacterized protein isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112281824 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112281912 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112288265 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112289769 uncharacterized protein isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112291379 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112275467 uncharacterized protein isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        112276476 uncharacterized protein isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        112280308 uncharacterized protein isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        112285302 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        112285419 uncharacterized protein	K14411 MSI; RNA-binding protein Musashi 
E        112288883 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        112290721 heterogeneous nuclear ribonucleoprotein 1	K14411 MSI; RNA-binding protein Musashi 
E        112282947 uncharacterized protein isoform X1	K14416 HBS1; elongation factor 1 alpha-like protein 
E        112281342 protein PELOTA 1	K06965 PELO; protein pelota 
E        112272840 polyadenylate-binding protein 1 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        112274363 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        112274664 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        112295661 polyadenylate-binding protein 2 isoform X1	K14396 PABPN1; polyadenylate-binding protein 2 
E        112276550 DEAD-box ATP-dependent RNA helicase 38	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        112279040 DEAD-box ATP-dependent RNA helicase 38	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        112285012 DEAD-box ATP-dependent RNA helicase 38	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        112286419 uncharacterized protein	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        112288508 uncharacterized protein	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        112291534 transcription factor Pur-alpha 1 isoform X2	K21772 PURA; transcriptional activator protein Pur-alpha 
E        112294468 transcription factor Pur-alpha 1 isoform X1	K21772 PURA; transcriptional activator protein Pur-alpha 
E        112291674 SAC3 family protein A isoform X1	K23802 LENG8; SAC3 family protein LENG8/THP3 
E        112294229 SAC3 family protein A	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        112278147 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        112286798 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        112286839 eukaryotic peptide chain release factor subunit 1-3	K03265 ETF1; peptide chain release factor subunit 1 
E        112294456 eukaryotic peptide chain release factor subunit 1-3 isoform X1	K03265 ETF1; peptide chain release factor subunit 1 
E        112278346 uncharacterized protein	K03267 ERF3; peptide chain release factor subunit 3 
E        112273254 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        112275803 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        112288757 regulator of nonsense transcripts UPF2	K14327 UPF2; regulator of nonsense transcripts 2 
E        112281420 uncharacterized protein isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        112289613 uncharacterized protein isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        112277143 serine/threonine-protein phosphatase PP2A-2 catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        112277397 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        112277736 serine/threonine-protein phosphatase PP2A-2 catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        112281327 serine/threonine-protein phosphatase PP2A-2 catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        112293808 serine/threonine-protein phosphatase PP2A catalytic subunit	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        112278443 uncharacterized protein	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        112283747 uncharacterized protein	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        112293505 uncharacterized protein	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        112274379 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112274949 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112275765 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112284963 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112288840 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112295582 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112295956 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        112274464 serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        112278804 serine/threonine protein phosphatase 2A regulatory subunit B''beta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        112283448 probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        112289189 serine/threonine protein phosphatase 2A regulatory subunit B''beta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        112291877 serine/threonine protein phosphatase 2A regulatory subunit B''alpha isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        112294030 serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X1	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        112276124 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        112277123 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        112285862 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        112291434 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        112293901 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        112294053 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        112294602 serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        112287799 uncharacterized protein isoform X1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        112284926 uncharacterized protein	K14409 SMG7; protein SMG7 
E        112286954 uncharacterized protein	K14409 SMG7; protein SMG7 
E        112288341 nonsense-mediated mRNA decay factor SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        112296052 uncharacterized protein	K18734 SMG8; protein SMG8 
E        112292021 uncharacterized protein isoform X1	K18735 SMG9; protein SMG9 
C    Factors involved in mRNA localization
D      Cargo complex
E        112282024 pumilio homolog 24	K14844 PUF6; pumilio homology domain family member 6 
E        112287072 uncharacterized protein isoform X1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        112292776 uncharacterized protein isoform X1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
D      Trans-acting binding proteins
E        112284352 uncharacterized protein	K13210 FUBP; far upstream element-binding protein 
E        112288614 uncharacterized protein isoform X1	K13210 FUBP; far upstream element-binding protein 
E        112279082 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112279083 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112279084 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112288666 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112288671 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112288692 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112292377 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112292386 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112292582 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112292660 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        112272741 elongation factor 1-gamma 3	K03233 EEF1G; elongation factor 1-gamma 
E        112273872 elongation factor 1-gamma 2 isoform X1	K03233 EEF1G; elongation factor 1-gamma 
E        112295662 elongation factor 1-gamma 2	K03233 EEF1G; elongation factor 1-gamma 
D      Other mRNA localization factors
E        112274313 protein PIR isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        112275947 protein PIR isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        112287917 flowering locus K homology domain isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        112291554 flowering locus K homology domain isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        112291860 RNA-binding KH domain-containing protein RCF3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        112272811 protein argonaute 16	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112276839 protein argonaute PNH1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112281095 protein argonaute 4A	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112282399 protein argonaute PNH1 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112294233 uncharacterized protein	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112294871 protein argonaute PNH1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112295137 protein argonaute 4B	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        112278028 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        112281215 eukaryotic translation initiation factor	K03259 EIF4E; translation initiation factor 4E 
E        112281589 eukaryotic translation initiation factor NCBP	K03259 EIF4E; translation initiation factor 4E 
E        112283410 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        112289123 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        112293413 eukaryotic translation initiation factor 4E-1	K03259 EIF4E; translation initiation factor 4E 
E        112273254 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        112275803 regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        112286305 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112291511 DEAD-box ATP-dependent RNA helicase 11	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112293260 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112294421 DEAD-box ATP-dependent RNA helicase 37	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        112278580 DEAD-box ATP-dependent RNA helicase 6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        112289042 DEAD-box ATP-dependent RNA helicase 6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        112279327 protein decapping 5 isoform X1	K18749 LSM14; protein LSM14 
E        112285912 protein decapping 5 isoform X1	K18749 LSM14; protein LSM14 
E        112286076 protein decapping 5 isoform X1	K18749 LSM14; protein LSM14 
E        112289268 probable RNA helicase SDE3	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        112278389 transportin-1 isoform X1	K18752 TNPO1; transportin-1 
E        112282492 transportin-1	K18752 TNPO1; transportin-1 
E        112283172 transportin-1 isoform X1	K18752 TNPO1; transportin-1 
E        112293658 transportin-1	K18752 TNPO1; transportin-1 
E        112287799 uncharacterized protein isoform X1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        112284926 uncharacterized protein	K14409 SMG7; protein SMG7 
E        112286954 uncharacterized protein	K14409 SMG7; protein SMG7 
E        112288341 nonsense-mediated mRNA decay factor SMG7 isoform X1	K14409 SMG7; protein SMG7 
E        112277793 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112277883 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112281686 uncharacterized protein isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112281824 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112281912 uncharacterized protein	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112288265 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112289769 uncharacterized protein isoform X1	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112291379 UBP1-associated protein 2C	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        112291827 uncharacterized protein isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        112285217 uncharacterized protein isoform X1	K18757 LARP1; la-related protein 1 
E        112288780 uncharacterized protein isoform X1	K18757 LARP1; la-related protein 1 
D      P-body specific factors
E        112294155 mRNA-decapping enzyme subunit 2	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        112278424 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112282759 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112283818 mRNA-decapping enzyme-like protein isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112292974 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112289996 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        112290859 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        112278281 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        112276367 sm-like protein LSM3A	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        112279641 sm-like protein LSM4 isoform X1	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        112291174 sm-like protein LSM4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        112279631 sm-like protein LSM5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        112275105 uncharacterized protein	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        112295052 uncharacterized protein	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        112281035 sm-like protein LSM7 isoform X1	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        112285431 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        112282175 sm-like protein LSM8 isoform X1	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        112276034 tubulin alpha chain	K07374 TUBA; tubulin alpha 
E        112277402 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        112277403 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        112279253 tubulin alpha-2 chain	K07374 TUBA; tubulin alpha 
E        112281110 tubulin alpha chain isoform X1	K07374 TUBA; tubulin alpha 
E        112281111 tubulin alpha chain isoform X1	K07374 TUBA; tubulin alpha 
E        112288231 tubulin alpha chain	K07374 TUBA; tubulin alpha 
E        112289159 tubulin alpha chain	K07374 TUBA; tubulin alpha 
E        112290284 tubulin alpha chain isoform X1	K07374 TUBA; tubulin alpha 
E        112291159 tubulin alpha chain isoform X1	K07374 TUBA; tubulin alpha 
E        112293488 tubulin alpha-6 chain	K07374 TUBA; tubulin alpha 
E        112293619 tubulin alpha-6 chain	K07374 TUBA; tubulin alpha 
E        141045762 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        112274499 uncharacterized protein isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        112281995 uncharacterized protein	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        112283716 uncharacterized protein	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        112273440 probable NOT transcription complex subunit VIP2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        112276073 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        112287760 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        112276707 uncharacterized protein isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        112285694 uncharacterized protein isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        112273279 carbon catabolite repressor protein 4 homolog 1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112274669 carbon catabolite repressor protein 4 homolog 4 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112275972 carbon catabolite repressor protein 4 homolog 1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112276947 carbon catabolite repressor protein 4 homolog 1 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112274510 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        112295495 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        112278830 DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        112287711 uncharacterized protein isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        112283597 uncharacterized protein isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        112293536 uncharacterized protein isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        112276682 protein PAT1 homolog	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        112285643 protein PAT1 homolog	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        112292821 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        112288757 regulator of nonsense transcripts UPF2	K14327 UPF2; regulator of nonsense transcripts 2 
E        112281420 uncharacterized protein isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        112289613 uncharacterized protein isoform X1	K14328 UPF3; regulator of nonsense transcripts 3 
E        112283177 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        112295820 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
D      Stress granule specific factors
E        112279194 oligouridylate-binding protein 1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        112279195 oligouridylate-binding protein 1 isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        112288089 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112289998 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112291280 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112293323 polyadenylate-binding protein 2	K13126 PABPC; polyadenylate-binding protein 
E        112276646 nuclear transport factor 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        112277792 nuclear transport factor 2	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        112285952 nuclear transport factor 2 isoform X1	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        112283089 eukaryotic translation initiation factor 2A isoform X1	K15026 EIF2A; translation initiation factor 2A 
E        112284860 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        112288509 eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        112278667 eukaryotic initiation factor 4A-10	K03257 EIF4A; translation initiation factor 4A 
E        112282558 eukaryotic initiation factor 4A-9 isoform X2	K03257 EIF4A; translation initiation factor 4A 
E        112283465 eukaryotic initiation factor 4A-10	K03257 EIF4A; translation initiation factor 4A 
E        112284369 eukaryotic initiation factor 4A-9	K03257 EIF4A; translation initiation factor 4A 
E        112288735 eukaryotic initiation factor 4A-15 isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        112289778 ATP-dependent RNA helicase eIF4A isoform X1	K03257 EIF4A; translation initiation factor 4A 
E        112272841 eukaryotic initiation factor 4A-3	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        112275368 eukaryotic initiation factor 4A-3 isoform X1	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        112279793 eukaryotic translation initiation factor 4B2 isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        112280190 uncharacterized protein isoform X1	K03260 EIF4G; translation initiation factor 4G 
E        112280367 uncharacterized protein	K03260 EIF4G; translation initiation factor 4G 
E        112291114 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112291810 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112294551 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112294647 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112294669 eukaryotic translation initiation factor	K03260 EIF4G; translation initiation factor 4G 
E        112278525 small ribosomal subunit protein RACK1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        112282773 small ribosomal subunit protein RACK1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        112293687 small ribosomal subunit protein RACK1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        112286507 uncharacterized protein isoform X1	K18404 TDRD3; tudor domain-containing protein 3 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        112278424 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112282759 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112283818 mRNA-decapping enzyme-like protein isoform X1	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112292974 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        112294155 mRNA-decapping enzyme subunit 2	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        112278580 DEAD-box ATP-dependent RNA helicase 6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        112289042 DEAD-box ATP-dependent RNA helicase 6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        112292821 enhancer of mRNA-decapping protein 4 isoform X1	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        112276682 protein PAT1 homolog	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        112285643 protein PAT1 homolog	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        112289996 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        112290859 sm-like protein LSM1B	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        112278281 sm-like protein LSM2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        112276367 sm-like protein LSM3A	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        112279641 sm-like protein LSM4 isoform X1	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        112291174 sm-like protein LSM4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        112279631 sm-like protein LSM5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        112275105 uncharacterized protein	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        112295052 uncharacterized protein	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        112281035 sm-like protein LSM7 isoform X1	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        112285431 sm-like protein LSM7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        112282175 sm-like protein LSM8 isoform X1	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
D      Other 5'-3' decay factors
C    3'-5' decay
D      Core exosome factors
E        112275177 uncharacterized protein	K07573 CSL4; exosome complex component CSL4 
E        112280670 exosome complex component RRP4 homolog isoform X1	K03679 RRP4; exosome complex component RRP4 
E        112286417 uncharacterized protein isoform X1	K03681 RRP40; exosome complex component RRP40 
E        112278629 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        112281407 exosome complex exonuclease RRP46 homolog isoform X1	K12590 RRP46; exosome complex component RRP46 
E        112280138 exosome complex component RRP41-like	K12587 MTR3; exosome complex component MTR3 
E        112274786 uncharacterized protein	K12589 RRP42; exosome complex component RRP42 
E        112296127 uncharacterized protein	K12586 RRP43; exosome complex component RRP43 
E        112292501 exosome complex component RRP45A isoform X1	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        112281306 uncharacterized protein	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        112294702 uncharacterized protein	K12592 C1D; exosome complex protein LRP1 
E        112292997 uncharacterized protein	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
D      TRAMP complex
E        112276814 uncharacterized protein	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        112287773 DExH-box ATP-dependent RNA helicase DExH10	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
E        112291762 DExH-box ATP-dependent RNA helicase DExH9	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        112273341 DExH-box ATP-dependent RNA helicase DExH11	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        112286737 tetratricopeptide repeat protein SKI3	K12600 SKI3; superkiller protein 3 
E        112275705 WD repeat-containing protein VIP3 isoform X1	K12602 WDR61; WD repeat-containing protein 61 
E        112293988 WD repeat-containing protein VIP3 isoform X1	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        112273279 carbon catabolite repressor protein 4 homolog 1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112274669 carbon catabolite repressor protein 4 homolog 4 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112275972 carbon catabolite repressor protein 4 homolog 1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112276947 carbon catabolite repressor protein 4 homolog 1 isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        112274499 uncharacterized protein isoform X1	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        112281995 uncharacterized protein	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        112283716 uncharacterized protein	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        112273440 probable NOT transcription complex subunit VIP2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        112276073 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        112287760 probable NOT transcription complex subunit VIP2 isoform X1	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        112276707 uncharacterized protein isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        112285694 uncharacterized protein isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        112274510 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        112295495 probable CCR4-associated factor 1 homolog 6	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        112277713 uncharacterized protein	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        112278254 uncharacterized protein	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        112293075 uncharacterized protein	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        112286899 uncharacterized protein	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
E        112292368 uncharacterized protein	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
E        112278380 ABC transporter I family member 20 isoform X1	K12608 CAF16; CCR4-NOT complex subunit CAF16 
E        112286187 ABC transporter I family member 21	K12608 CAF16; CCR4-NOT complex subunit CAF16 
D      Pan complex
E        112287711 uncharacterized protein isoform X1	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        112283597 uncharacterized protein isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        112293536 uncharacterized protein isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        112280641 uncharacterized protein isoform X1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        112283671 poly(A)-specific ribonuclease PARN-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        112285837 uncharacterized protein isoform X1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        112288829 DExH-box ATP-dependent RNA helicase DExH6	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        112291632 DExH-box ATP-dependent RNA helicase DExH1	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        112295026 DExH-box ATP-dependent RNA helicase DExH3	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        112287324 uncharacterized protein	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        112286922 uncharacterized protein	K26109 NRDE2; nuclear exosome regulator NRDE2 
C    Other degradation factors
D      RNases
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        112286990 oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
E        112292710 oligoribonuclease	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
E        112290058 uncharacterized protein isoform X1	K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] 
D      Other RNA degradosome components
E        112277838 enolase 1, chloroplastic	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        112279595 enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        112280227 enolase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        112290573 uncharacterized protein	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        112292765 enolase 1, chloroplastic	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        112274647 polyribonucleotide nucleotidyltransferase 2, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        112279370 polyribonucleotide nucleotidyltransferase 2, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        112283839 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        112273596 ATP-dependent 6-phosphofructokinase 5, chloroplastic	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112283154 ATP-dependent 6-phosphofructokinase 6 isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112286176 ATP-dependent 6-phosphofructokinase 5, chloroplastic	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112286452 ATP-dependent 6-phosphofructokinase 5, chloroplastic isoform X2	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112286560 ATP-dependent 6-phosphofructokinase 6	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112288805 ATP-dependent 6-phosphofructokinase 5, chloroplastic isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112291863 ATP-dependent 6-phosphofructokinase 6	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        112293526 ATP-dependent 6-phosphofructokinase 6 isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        112275610 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        112276105 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        112281386 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        112284944 heat shock 70 kDa protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        112273125 chaperonin CPN60-2, mitochondrial isoform X1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112277020 ruBisCO large subunit-binding protein subunit alpha	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112277874 chaperonin CPN60-2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112278348 ruBisCO large subunit-binding protein subunit beta, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112281465 chaperonin CPN60-1, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112283596 ruBisCO large subunit-binding protein subunit beta, chloroplastic	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112285968 ruBisCO large subunit-binding protein subunit alpha	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112290817 chaperonin CPN60-2, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112293635 ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
E        112295959 ruBisCO large subunit-binding protein subunit alpha isoform X1	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        112280670 exosome complex component RRP4 homolog isoform X1	K03679 RRP4; exosome complex component RRP4 
E        112275177 uncharacterized protein	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        112278629 exosome complex component RRP41 homolog	K11600 RRP41; exosome complex component RRP41 
E        112274786 uncharacterized protein	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: March 26, 2026