+D GENES KO #

  KEGG Orthology (KO) - Pseudomonas putida HB3267

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ppuh00010] D B479_05335 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D B479_22845 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D B479_24665 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D B479_24260 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D B479_22920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D B479_05325 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_08370 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_24275 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D B479_24755 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D B479_06110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D B479_21590 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_18370 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_08025 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D B479_02175 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D B479_03275 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_02170 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D B479_16535 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D B479_16370 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D B479_11545 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D B479_11520 quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D B479_15465 gluconate 2-dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D B479_14215 gluconate 2-dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_11550 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D B479_03230 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_15840 putative acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_12985 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_26390 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D B479_14470 aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D B479_01700 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:ppuh00020] D B479_17890 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D B479_08190 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D B479_09510 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D B479_17020 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D B479_17025 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D B479_17865 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D B479_17860 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17845 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D B479_17850 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D B479_01105 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D B479_17875 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D B479_17870 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D B479_17885 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D B479_17880 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D B479_21600 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D B479_05035 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D B479_06770 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D B479_04250 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_14875 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_19745 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_08225 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_26470 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D B479_26465 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D B479_01700 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D B479_02175 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D B479_03275 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_02170 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ppuh00030] D B479_22845 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D B479_05390 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_26485 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_17160 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_05395 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D B479_17165 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D B479_02555 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D B479_17300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_17305 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_24285 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_08460 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D B479_25235 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D B479_10000 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_18950 phosphonate metabolism protein/1,5-bisphosphokinase PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D B479_04115 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D B479_05330 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D B479_05400 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D B479_14470 aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D B479_21710 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D B479_21075 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D B479_13050 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D B479_14220 gluconate 2-dehydrogenase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D B479_14225 Gluconate 2-dehydrogenase acceptor subunit K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D B479_22275 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D B479_14200 ribokinase-like domain-containing protein K11441 kguK; dehydrogluconokinase [EC:2.7.1.13] D B479_14190 gluconate 2-dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43] D B479_14340 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D B479_18365 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D B479_04405 thioredoxin reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9] D B479_24260 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D B479_24665 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:ppuh00040] D B479_14865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D B479_16445 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D B479_02555 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D B479_15395 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_19715 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_10680 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_07885 class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ppuh00051] D B479_22205 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_07885 class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D B479_24665 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D B479_04445 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D B479_22150 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D B479_22155 glycosyl transferase Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33] D B479_22160 type IV pilus assembly PilZ K19291 alg44; mannuronan synthase [EC:2.4.1.33] D B479_22175 carbohydrate-binding and sugar hydrolysis protein K01795 algG; mannuronan 5-epimerase [EC:5.1.3.37] D B479_22185 algL; poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D B479_24260 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D B479_22920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D B479_04450 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:ppuh00052] D B479_13645 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D B479_02995 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D B479_16445 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_05335 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism [PATH:ppuh00053] D B479_14865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D B479_13050 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_23220 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D B479_10665 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D B479_15395 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_19715 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_10680 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_15380 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D B479_15390 garD; galactarate dehydrogenase K01708 garD; galactarate dehydratase [EC:4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:ppuh00500] D B479_16445 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D B479_21365 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D B479_17175 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D B479_17215 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D B479_24670 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D B479_17220 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D B479_17185 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D B479_17225 alpha amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D B479_17200 glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D B479_17190 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D B479_17180 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_05335 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D B479_22845 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ppuh00520] D B479_08345 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D B479_08350 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D B479_00145 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D B479_22925 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D B479_00155 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D B479_02650 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D B479_06815 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D B479_02505 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D B479_02510 nucleotidyl transferase subunit K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D B479_05125 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D B479_07430 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D B479_07010 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D B479_06895 UDP-glucose/GDP-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D B479_06900 UDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D B479_06915 UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D B479_06910 UDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D B479_06955 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D B479_05335 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_16445 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D B479_14865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D B479_13645 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D B479_02995 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D B479_22845 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D B479_22205 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D B479_22150 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D B479_25605 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:ppuh00620] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_02175 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D B479_03275 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_02170 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_25870 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D B479_16535 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D B479_16370 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D B479_11545 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D B479_11520 quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D B479_15465 gluconate 2-dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D B479_14215 gluconate 2-dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D B479_04360 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D B479_21590 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_18370 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_06090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D B479_03305 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D B479_03300 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D B479_07655 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_11550 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D B479_03230 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D B479_01105 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D B479_15840 putative acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_12985 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_23030 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D B479_06290 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D B479_23035 D-lactate dehydrogenase K18930 dld; D-lactate dehydrogenase D B479_16090 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D B479_17635 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D B479_04350 beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D B479_22275 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D B479_24895 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D B479_21440 putative carboxyphosphonoenolpyruvate phosphonomutase K01003 bcpA; oxaloacetate decarboxylase [EC:4.1.1.112] D B479_26470 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D B479_26465 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D B479_04250 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_14875 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_19745 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_08225 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D B479_21600 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D B479_05035 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D B479_06770 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D B479_05835 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D B479_01700 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D B479_08025 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D B479_02260 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D B479_15995 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_05405 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D B479_11805 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ppuh00630] D B479_17490 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_02260 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D B479_15995 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D B479_17890 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D B479_08190 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D B479_09510 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_19360 dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D B479_15975 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D B479_15980 glcE; glycolate oxidase FAD binding subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D B479_15985 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D B479_02890 catalase K03781 katE; catalase [EC:1.11.1.6] D B479_00905 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6] D B479_12355 catalase domain-containing protein K03781 katE; catalase [EC:1.11.1.6] D B479_22275 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D B479_04305 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D B479_00800 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D B479_07445 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D B479_02560 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D B479_25445 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_25455 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_13545 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_26230 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_19335 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_11380 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_15670 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_03790 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_02060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_05235 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D B479_25495 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D B479_05225 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_25505 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_05240 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D B479_25500 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D B479_18350 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D B479_18355 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D B479_18360 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D B479_13395 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D B479_18365 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D B479_05400 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D B479_08875 putative formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D B479_08870 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D B479_02930 molybdopterin oxidoreductase Fe4S4 region K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D B479_02935 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D B479_08865 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit D B479_02940 nitrate-inducible formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D B479_08860 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D B479_02945 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D B479_21565 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D B479_02085 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D B479_16230 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D B479_24610 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:ppuh00640] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_09560 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D B479_15840 putative acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_12985 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_04360 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D B479_18910 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D B479_18915 transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D B479_18920 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_09030 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_06090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D B479_03305 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D B479_03300 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D B479_07655 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D B479_03495 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D B479_17850 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D B479_17845 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D B479_22670 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_03500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_09490 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D B479_09505 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D B479_09495 aconitate hydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D B479_09500 putative AcnD-accessory protein PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D B479_09510 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D B479_09485 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:ppuh00650] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_13110 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D B479_16035 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D B479_13010 3-hydroxybutyryl-CoA epimerase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09030 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D B479_22445 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D B479_25870 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D B479_19360 dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D B479_24480 poly(R)-hydroxyalkanoic acid synthase, class II K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D B479_24490 poly(3-hydroxyalkanoic acid) synthase 2 K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D B479_21515 3-oxoadipate:succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D B479_21510 3-oxoadipate:succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D B479_17875 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D B479_17870 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D B479_17885 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D B479_17880 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D B479_01500 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D B479_13880 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D B479_01495 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D B479_13530 aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D B479_01105 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D B479_15080 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D B479_13690 3-oxoacid CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D B479_13685 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D B479_12710 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D B479_12720 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D B479_22735 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_25845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_12795 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_21415 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_20555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_22730 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D B479_03270 alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:ppuh00660] D B479_22735 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_25845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_12795 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_21415 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_20555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_22730 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D B479_17850 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D B479_17845 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D B479_07610 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D B479_07615 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D B479_07625 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ppuh00562] D B479_04685 protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D B479_22670 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_03500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_22920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ppuh00190] D B479_17510 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D B479_17515 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D B479_17520 bifunctional NADH:ubiquinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D B479_17525 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D B479_17530 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D B479_17535 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D B479_17540 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D B479_17545 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D B479_17550 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D B479_17555 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D B479_17560 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D B479_17565 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D B479_17570 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D B479_12260 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D B479_03615 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D B479_17875 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D B479_17870 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D B479_17885 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D B479_17880 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D B479_22010 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D B479_22005 cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D B479_22000 ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D B479_00880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_04550 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_04545 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D B479_00855 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D B479_00845 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D B479_00840 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D B479_00850 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D B479_00875 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D B479_18110 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D B479_18130 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D B479_18115 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D B479_18135 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D B479_18120 CcoQ_2 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D B479_18140 cbb3-type cytochrome c oxidase, CcoQ subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D B479_18125 cbb3-type cytochrome c oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D B479_18145 cbb3-type cytochrome c oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D B479_04540 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D B479_04535 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D B479_04530 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D B479_22535 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D B479_22530 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D B479_00175 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D B479_00165 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D B479_00170 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D B479_00180 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D B479_00160 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D B479_00195 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D B479_00185 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D B479_00190 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D B479_03195 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D B479_25630 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D B479_04065 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D B479_01850 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ppuh00710] D B479_24275 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D B479_05325 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_08370 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_24260 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D B479_24665 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D B479_17300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_17305 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_24285 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_25235 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D B479_22920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D B479_02555 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D B479_08460 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D B479_05835 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D B479_01700 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D B479_24895 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:ppuh00720] D B479_08025 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D B479_05835 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D B479_26470 pyruvate carboxylase subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D B479_26465 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D B479_21600 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D B479_05035 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D B479_06770 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D B479_17875 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D B479_17870 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D B479_17885 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D B479_17880 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D B479_17845 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D B479_17850 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_17020 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D B479_17025 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D B479_08190 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D B479_09510 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D B479_06090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D B479_03305 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D B479_03300 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D B479_07655 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D B479_09295 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D B479_16235 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D B479_22470 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D B479_24350 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D B479_04360 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:ppuh00680] D B479_02095 formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D B479_06135 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D B479_08870 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D B479_02930 molybdopterin oxidoreductase Fe4S4 region K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D B479_02935 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D B479_08865 NADH dehydrogenase (quinone) K00124 fdoH; formate dehydrogenase iron-sulfur subunit D B479_02940 nitrate-inducible formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D B479_08860 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D B479_02945 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D B479_08875 putative formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D B479_03790 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_02060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_04305 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D B479_18365 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D B479_06110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D B479_05835 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D B479_24260 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D B479_24665 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D B479_14560 hypothetical protein K08685 qhpA; quinohemoprotein amine dehydrogenase [EC:1.4.9.1] D B479_15665 glutamine amidotransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D B479_15660 glutamate synthase subunit alpha K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D B479_15655 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D B479_04360 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_08025 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D B479_24755 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D B479_25260 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D B479_06835 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D B479_24010 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ppuh00910] D B479_08075 nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D B479_06550 nitrite reductase, (NAD(P)H) large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D B479_06555 nitrite reductase, (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D B479_16475 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D B479_02630 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D B479_13035 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D B479_08015 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D B479_03810 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D B479_25445 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_25455 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_13545 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_26230 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_19335 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_11380 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_15670 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24850 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D B479_24845 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D B479_05275 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D B479_00830 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ppuh00920] D B479_18390 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D B479_25380 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D B479_25375 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D B479_25370 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D B479_25365 sulfate ABC transporter ATPase K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D B479_01600 taurine ABC transporter periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein D B479_01595 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D B479_01580 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D B479_01470 NMT1/THI5-like domain-containing protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_15030 aliphatic sulfonates ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01620 aliphatic sulfonates ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01195 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_13000 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01435 putative nitrate ABC transporter periplasmic nitrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01465 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01630 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01205 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_12995 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01440 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D B479_01460 ABC transporter-like protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01635 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01200 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01445 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_12990 taurine-transporting AtPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01625 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D B479_01615 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D B479_22075 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D B479_22080 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D B479_01740 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D B479_09455 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D B479_11535 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY D B479_04800 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D B479_06545 molybdopterin oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D B479_09690 sulfite reductase (ferredoxin) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D B479_00595 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D B479_24000 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D B479_25060 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D B479_02470 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D B479_04695 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_13610 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_01570 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_19530 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D B479_24955 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D B479_03745 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D B479_18525 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D B479_07680 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D B479_08850 luciferase family protein K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] D B479_15160 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D B479_13900 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D B479_12655 acyl-CoA dehydrogenase domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D B479_15165 acyl-CoA dehydrogenase domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D B479_07945 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D B479_02330 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D B479_02320 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ppuh00061] D B479_06090 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D B479_03305 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D B479_03300 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D B479_07655 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D B479_07485 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D B479_07475 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D B479_18755 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D B479_17795 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D B479_12050 beta-ketoacyl synthase-like protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_12045 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_07490 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_03415 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_12060 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07480 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07205 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_17790 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D B479_06065 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D B479_22445 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D B479_19345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_19350 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ppuh00071] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_08305 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_13010 3-hydroxybutyryl-CoA epimerase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D B479_09030 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D B479_16315 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D B479_13910 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D B479_15845 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D B479_07370 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D B479_01130 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D B479_19345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_19350 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_26305 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D B479_16535 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ppuh00561] D B479_13395 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D B479_18365 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_16370 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D B479_20955 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D B479_05930 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D B479_07470 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D B479_02435 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D B479_00620 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D B479_07180 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D B479_06225 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D B479_23725 alpha/beta hydrolase fold protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:ppuh00564] D B479_17770 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D B479_20965 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D B479_05930 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D B479_02435 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D B479_00620 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D B479_07180 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D B479_06225 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D B479_08385 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D B479_03220 ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D B479_03215 ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D B479_06035 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D B479_22630 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D B479_15730 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D B479_22720 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D B479_24005 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D B479_17405 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D B479_03090 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D B479_26555 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D B479_13215 cardiolipin synthase 2 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D B479_26130 phospholipase D/transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:ppuh00565] D B479_17505 hypothetical protein K18575 TMEM86B; alkenylglycerophosphocholine hydrolase [EC:3.3.2.2] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:ppuh00592] D B479_08305 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:ppuh01040] D B479_01515 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D B479_09410 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D B479_23245 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D B479_26385 Thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ppuh00230] D B479_24060 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D B479_01735 nudE; adenosine nucleotide hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_04115 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D B479_07675 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D B479_23560 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D B479_06345 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D B479_05610 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D B479_05475 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D B479_06350 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D B479_26405 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D B479_26410 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D B479_20190 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D B479_17045 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D B479_23555 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D B479_18185 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D B479_10770 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D B479_06150 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D B479_01730 HAD family hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D B479_18100 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D B479_03605 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D B479_04230 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D B479_05435 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D B479_04740 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D B479_24970 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D B479_26070 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D B479_18255 xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D B479_18260 xanthine dehydrogenase K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D B479_05440 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D B479_18270 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D B479_26215 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D B479_20480 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D B479_20485 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D B479_08130 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D B479_26245 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D B479_25625 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D B479_06320 (p)ppGpp synthetase I SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D B479_25655 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D B479_23910 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D B479_23345 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D B479_15705 decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D B479_03470 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D B479_05840 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D B479_06325 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D B479_24050 Icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D B479_02475 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D B479_22075 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D B479_22080 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D B479_18295 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D B479_18305 hypothetical protein K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D B479_18415 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D B479_08790 urate catabolism protein K16842 hpxB; allantoinase [EC:3.5.2.5] D B479_18300 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5] D B479_15040 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D B479_18310 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D B479_12155 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D B479_12150 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D B479_12145 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D B479_05275 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:ppuh00240] D B479_22960 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D B479_22965 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D B479_24455 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D B479_24460 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D B479_20895 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D B479_08090 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D B479_26190 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D B479_07025 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D B479_06020 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D B479_04740 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D B479_06325 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D B479_04995 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D B479_24250 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D B479_06100 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D B479_06850 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D B479_10770 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D B479_06150 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D B479_18100 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D B479_04225 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D B479_24450 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D B479_15705 decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D B479_13355 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D B479_20825 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D B479_20480 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D B479_20485 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D B479_07505 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D B479_26175 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D B479_25190 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D B479_17140 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D B479_17145 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D B479_17135 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D B479_17125 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D B479_10860 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D B479_02925 short-chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ppuh00250] D B479_21170 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D B479_02965 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D B479_20540 asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D B479_09975 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D B479_06750 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D B479_04795 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D B479_07295 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D B479_26425 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D B479_20885 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D B479_01300 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D B479_23910 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D B479_17045 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D B479_24455 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D B479_01500 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D B479_13880 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D B479_01495 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D B479_13530 aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D B479_24850 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D B479_24845 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D B479_08015 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D B479_03810 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D B479_24180 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D B479_25445 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_25455 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_13545 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_26230 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_19335 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_11380 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_15670 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_22960 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D B479_22965 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D B479_10655 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D B479_00145 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D B479_07675 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ppuh00260] D B479_18970 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D B479_07630 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D B479_03770 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D B479_05670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D B479_00935 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D B479_03760 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D B479_05675 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D B479_02055 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D B479_03790 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_02060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_04305 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D B479_22275 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D B479_13395 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D B479_18365 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D B479_24755 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D B479_25260 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D B479_06835 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D B479_24010 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D B479_02925 short-chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D B479_24380 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D B479_05235 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D B479_25495 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D B479_05225 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_25505 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_05240 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D B479_25500 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D B479_11675 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D B479_15730 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D B479_22720 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D B479_24795 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D B479_24790 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D B479_03980 putative betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D B479_02025 Rieske family iron-sulfur cluster-binding protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D B479_02030 oxidoreductase FAD-binding domain-containing protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D B479_02000 NADH:flavin oxidoreductase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D B479_02005 iron-sulfur cluster-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D B479_02010 electron transfer flavoprotein subunit alpha K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D B479_02015 electron transfer flavoprotein subunit alpha/beta-like protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D B479_02075 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D B479_16250 glycine cleavage T protein (aminomethyl transferase) K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D B479_02065 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D B479_16240 FAD dependent oxidoreductase K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D B479_02080 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D B479_16255 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D B479_02070 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D B479_16245 sarcosine oxidase subunit delta heterotetrameric K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D B479_19660 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D B479_05230 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D B479_13570 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D B479_01920 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D B479_14485 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D B479_04030 EutB ectoine utilization protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D B479_25230 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D B479_14840 putative L-serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D B479_15795 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D B479_15830 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D B479_00740 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D B479_00745 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D B479_13875 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D B479_17995 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D B479_04040 EutD ectoine utilization protein K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D B479_04045 EutE ectoine utilization protein K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D B479_04055 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D B479_04050 succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:ppuh00270] D B479_04695 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_13610 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_01570 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_19530 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D B479_19660 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D B479_09710 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D B479_22465 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D B479_24295 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D B479_13275 nucleoside phosphorylase-like protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D B479_03605 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D B479_06825 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D B479_07115 putative oxidase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D B479_15335 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_07550 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_22055 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D B479_07320 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D B479_10615 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_08490 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_10125 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_03675 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_24345 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D B479_07720 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D B479_18970 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D B479_07630 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D B479_03770 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D B479_05670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D B479_24955 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D B479_03745 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D B479_10720 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D B479_18525 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D B479_07680 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D B479_12445 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D B479_01650 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D B479_24430 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D B479_24000 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D B479_25060 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D B479_15830 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D B479_03725 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D B479_05230 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D B479_13570 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D B479_01920 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D B479_14840 putative L-serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D B479_06310 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D B479_25260 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D B479_06835 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ppuh00280] D B479_12445 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D B479_22345 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D B479_18910 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D B479_18915 transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D B479_18920 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_09030 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D B479_16315 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D B479_13910 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D B479_15845 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D B479_17240 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_08305 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D B479_22665 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D B479_22670 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_03500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_03495 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D B479_17255 acetyl-CoA carboxylase, biotin carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D B479_17245 propionyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D B479_17250 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D B479_15080 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D B479_13690 3-oxoacid CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D B479_13685 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D B479_12710 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ppuh00290] D B479_14485 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D B479_04030 EutB ectoine utilization protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D B479_25230 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D B479_14840 putative L-serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19] D B479_07610 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D B479_07615 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D B479_07625 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D B479_22735 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_25845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_12795 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_21415 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_20555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_22730 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D B479_22725 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D B479_25115 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D B479_12445 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D B479_22345 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D B479_07295 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D B479_05405 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D B479_11805 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ppuh00300] D B479_03770 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D B479_05670 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D B479_18970 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D B479_07630 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D B479_20205 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_11285 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_00050 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_07880 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_22970 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D B479_05975 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D B479_02340 class III aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D B479_05995 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D B479_05950 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D B479_25685 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D B479_08000 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D B479_25680 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D B479_21935 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D B479_21930 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ppuh00310] D B479_26035 Aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D B479_17460 class III aminotransferase K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39] D B479_17860 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_01130 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_02390 amine oxidase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2] D B479_02385 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30] D B479_15830 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D B479_13870 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D B479_05715 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D B479_01500 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D B479_01495 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D B479_14930 carbon starvation induced protein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D B479_14925 hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D B479_26045 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D B479_19080 FAD linked oxidase domain-containing protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D B479_01135 L-carnitine dehydratase/bile acid-inducible protein F K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D B479_15365 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase D B479_15340 malate/L-lactate dehydrogenase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] D B479_26030 FAD dependent oxidoreductase K26065 amaA; L-pipecolate oxidase D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:ppuh00220] D B479_05280 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D B479_20935 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D B479_20885 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D B479_01300 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D B479_11245 allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6] D B479_12155 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D B479_12150 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D B479_12145 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D B479_05285 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D B479_10655 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D B479_09975 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D B479_25445 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_25455 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_13545 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_26230 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_19335 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_11380 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_15670 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_22960 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D B479_22965 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D B479_05275 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D B479_08015 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D B479_03810 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D B479_07295 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D B479_25460 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D B479_21865 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D B479_26185 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D B479_15535 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D B479_02640 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D B479_02340 class III aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D B479_25465 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D B479_15250 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ppuh00330] D B479_11665 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D B479_13355 N-isopropylammelide isopropylaminohydrolase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D B479_11675 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D B479_17615 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D B479_03345 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D B479_08925 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D B479_01765 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D B479_04820 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D B479_14845 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D B479_11390 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D B479_25440 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D B479_11120 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_13870 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D B479_05715 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D B479_26140 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D B479_24380 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D B479_15825 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D B479_15835 hypothetical protein K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75] D B479_19230 agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D B479_14830 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_14005 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_19005 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D B479_19010 arginine/ornithine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D B479_18995 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D B479_19015 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D B479_19000 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D B479_18985 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D B479_26110 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D B479_09955 gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D B479_19340 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D B479_13555 FAD dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D B479_11125 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D B479_00045 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D B479_24945 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D B479_24180 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D B479_09255 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D B479_03890 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D B479_23500 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D B479_24600 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D B479_19750 putative proline racemase protein K01777 prdF; proline racemase [EC:5.1.1.4] C 00340 Histidine metabolism [PATH:ppuh00340] D B479_05130 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D B479_23915 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D B479_24535 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D B479_24530 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D B479_01895 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D B479_01885 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D B479_06945 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D B479_01900 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D B479_06950 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D B479_01880 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D B479_05140 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D B479_13495 histidinol-phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D B479_05135 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D B479_11935 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D B479_24625 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D B479_24630 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D B479_24615 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D B479_24645 N-formimino-L-glutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D B479_24610 N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_24380 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:ppuh00350] D B479_05140 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D B479_15335 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_07550 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_14425 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D B479_22365 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D B479_22355 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D B479_22360 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D B479_10915 aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D B479_24380 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D B479_14565 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D B479_16535 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D B479_19650 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D B479_01495 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:ppuh00360] D B479_19060 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D B479_10915 aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D B479_24380 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D B479_14565 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D B479_13125 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D B479_13115 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D B479_13130 paaA; phenylacetate-CoA oxygenase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D B479_13135 paaB; phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D B479_13140 phenylacetate-CoA oxygenase subunit PaaI K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D B479_13145 phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D B479_13150 phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D B479_15850 enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D B479_13105 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D B479_13170 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_13110 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D B479_16035 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D B479_05140 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D B479_15335 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_07550 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_14425 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D B479_26095 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D B479_04645 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D B479_15735 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] D B479_14830 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_14005 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_12615 Rieske (2Fe-2S) domain-containing protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D B479_25885 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D B479_25880 alpha/beta hydrolase fold family protein K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D B479_25875 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D B479_25865 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D B479_25870 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:ppuh00380] D B479_17860 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_01130 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_10915 aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D B479_24380 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_13035 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D B479_14830 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_14005 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_02890 catalase K03781 katE; catalase [EC:1.11.1.6] D B479_00905 katE; hydroperoxidase II K03781 katE; catalase [EC:1.11.1.6] D B479_12355 catalase domain-containing protein K03781 katE; catalase [EC:1.11.1.6] D B479_15735 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ppuh00400] D B479_09435 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D B479_07265 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D B479_12760 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D B479_24860 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D B479_09850 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D B479_03310 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D B479_10925 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D B479_09845 shikimate 5-dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D B479_00700 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D B479_11860 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D B479_15240 pyrroloquinoline quinone K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D B479_24865 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D B479_06845 bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D B479_02565 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D B479_02580 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D B479_02585 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D B479_07650 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D B479_02590 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D B479_00740 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D B479_00745 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D B479_06840 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D B479_05140 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D B479_15335 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_07550 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_19060 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ppuh00410] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_13870 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D B479_05715 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D B479_22840 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D B479_17140 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D B479_17145 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D B479_17135 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D B479_17125 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D B479_10860 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D B479_03495 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_09030 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D B479_22670 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D B479_03500 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:ppuh00430] D B479_22575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_15055 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_01580 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D B479_08015 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D B479_04360 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] C 00440 Phosphonate and phosphinate metabolism [PATH:ppuh00440] D B479_08985 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D B479_08990 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D B479_25155 metal dependent phosphohydrolase K21196 phnZ; 2-amino-1-hydroxyethylphosphonate dioxygenase (glycine-forming) [EC:1.13.11.78] C 00450 Selenocompound metabolism [PATH:ppuh00450] D B479_03745 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D B479_09710 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D B479_22465 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D B479_19660 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D B479_22055 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D B479_22075 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D B479_22080 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D B479_04600 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D B479_02955 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D B479_20840 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ppuh00460] D B479_21365 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D B479_13035 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D B479_22575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_15055 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_02965 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D B479_20540 asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D B479_03790 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_02060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ppuh00470] D B479_26090 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D B479_21900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D B479_15830 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10] D B479_10655 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D B479_09975 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D B479_04175 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D B479_21920 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D B479_15795 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D B479_25685 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D B479_08000 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D B479_25680 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D B479_09190 FAD dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D B479_19750 putative proline racemase protein K01777 prdF; proline racemase [EC:5.1.1.4] D B479_19705 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D B479_19720 FAD dependent oxidoreductase K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-] D B479_19710 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D B479_15395 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_19715 ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_10680 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D B479_26095 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D B479_04645 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ppuh00480] D B479_22575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_15055 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_25600 ChaC family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D B479_19560 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D B479_11240 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D B479_19555 allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D B479_19550 urea amidolyase subunit K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D B479_13280 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D B479_01650 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D B479_24430 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D B479_05195 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D B479_07760 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D B479_01295 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_07065 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_15960 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_10795 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_20525 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_21860 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_07375 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_07785 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_16440 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D B479_17020 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D B479_17025 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D B479_14190 gluconate 2-dehydrogenase K00032 E1.1.1.43; phosphogluconate 2-dehydrogenase [EC:1.1.1.43] D B479_17165 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D B479_05390 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_26485 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_17160 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_04375 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D B479_06465 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D B479_07305 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D B479_12835 redoxin domain-containing protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D B479_04820 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ppuh00540] D B479_06070 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D B479_21880 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D B479_06060 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D B479_14965 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D B479_06075 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D B479_07410 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D B479_05090 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D B479_06105 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D B479_05085 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D B479_07420 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D B479_24085 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D B479_00645 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D B479_06675 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D B479_19525 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D B479_16400 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D B479_19645 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D B479_00445 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D B479_04180 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D B479_13510 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D B479_20075 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D B479_21975 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D B479_24115 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D B479_00625 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D B479_02190 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D B479_02185 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D B479_02200 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D B479_11085 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D B479_02195 lipopolysaccharide core biosynthesis protein WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppuh00541] D B479_16445 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D B479_13645 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D B479_02995 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D B479_14865 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D B479_07005 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D B479_06995 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D B479_01760 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D B479_06990 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D B479_07000 DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D B479_02990 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D B479_18765 TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D B479_25605 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D B479_22205 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D B479_00155 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D B479_07010 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D B479_06955 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D B479_06960 NAD-dependent epimerase/dehydratase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D B479_06965 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D B479_06985 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D B479_06975 NAD-dependent epimerase/dehydratase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D B479_06895 UDP-glucose/GDP-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D B479_06900 UDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D B479_06915 UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D B479_06910 UDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:ppuh00550] D B479_05125 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D B479_07430 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D B479_21905 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D B479_21920 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D B479_21935 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D B479_21900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D B479_21930 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D B479_06030 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D B479_07030 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D B479_12235 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D B479_21925 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D B479_21910 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D B479_25005 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D B479_24890 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D B479_22750 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D B479_03370 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D B479_15945 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D B479_23480 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D B479_21940 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D B479_23460 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D B479_08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:ppuh00552] D B479_07030 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D B479_12235 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D B479_06985 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ppuh00543] D B479_22155 glycosyl transferase Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33] D B479_22160 type IV pilus assembly PilZ K19291 alg44; mannuronan synthase [EC:2.4.1.33] D B479_22190 alginate o-acetyltransferase AlgI K19294 algI; alginate O-acetyltransferase complex protein AlgI D B479_22195 protein AlgJ K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D B479_22200 alginate O-acetyltransferase K19296 algF; alginate O-acetyltransferase complex protein AlgF D B479_22180 alginate biosynthesis protein AlgX K19293 algX; alginate biosynthesis protein AlgX D B479_08245 group 1 glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH D B479_04695 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_13610 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_01570 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D B479_09720 acyltransferase 3 K16568 exoZ; exopolysaccharide production protein ExoZ B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ppuh00730] D B479_24075 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D B479_23360 bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D B479_04705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_16325 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_24705 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D B479_03585 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D B479_18770 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D B479_03115 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D B479_24990 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D B479_23365 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D B479_03085 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D B479_23980 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D B479_05840 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D B479_13360 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D B479_13365 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:ppuh00740] D B479_03100 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D B479_03070 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D B479_16280 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D B479_03060 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D B479_25700 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D B479_03130 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D B479_03075 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D B479_14895 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D B479_03065 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D B479_03535 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D B479_01615 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D B479_06405 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D B479_24060 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D B479_03245 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:ppuh00750] D B479_20705 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D B479_16565 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D B479_26520 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D B479_24280 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D B479_08205 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D B479_06835 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D B479_02490 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D B479_21115 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D B479_03760 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D B479_05675 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ppuh00760] D B479_21170 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D B479_20235 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D B479_04410 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D B479_23790 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D B479_15690 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D B479_10770 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D B479_06150 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D B479_23495 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D B479_06325 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D B479_17085 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D B479_23795 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D B479_06185 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D B479_11615 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D B479_15685 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D B479_07735 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D B479_08380 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D B479_01115 pyridine proton-translocating NAD(P) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D B479_01120 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D B479_01110 NAD(P)(+) transhydrogenase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D B479_02405 6-hydroxy-3-succinoylpyridine hydroxylase K15359 hspA; 6-hydroxy-3-succinoylpyridine 3-monooxygenase [EC:1.14.13.163] D B479_01495 gabD; succinate-semialdehyde dehydrogenase I K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D B479_13530 aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:ppuh00770] D B479_22735 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_25845 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_12795 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_21415 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_20555 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D B479_22730 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D B479_22725 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D B479_25115 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D B479_22835 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D B479_21840 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D B479_09440 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D B479_11840 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D B479_22840 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D B479_02670 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D B479_26170 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D B479_06325 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D B479_25085 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D B479_03645 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D B479_21660 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D B479_12445 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D B479_17140 dihydropyrimidine dehydrogenase subunit A K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D B479_17145 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D B479_17135 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D B479_17125 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D B479_10860 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:ppuh00780] D B479_02305 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D B479_17795 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D B479_12050 beta-ketoacyl synthase-like protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_12045 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_07490 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_03415 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_12060 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07480 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07205 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_06065 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D B479_02300 carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D B479_02295 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D B479_24385 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D B479_02310 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D B479_02290 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D B479_02665 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ppuh00785] D B479_23450 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D B479_23445 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_02175 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D B479_03275 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_02170 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D B479_17865 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D B479_17860 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D B479_18910 3-methyl-2-oxobutanoate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D B479_18915 transketolase, central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D B479_18920 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D B479_05235 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D B479_25495 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D B479_05225 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_25505 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_05240 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D B479_25500 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ppuh00790] D B479_07075 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D B479_26545 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D B479_02440 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D B479_22830 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D B479_02445 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D B479_22930 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D B479_26829 dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D B479_26969 dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D B479_26869 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D B479_25140 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D B479_07660 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D B479_03100 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D B479_03070 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D B479_16280 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D B479_09460 para-aminobenzoate synthase subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D B479_07495 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D B479_22425 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D B479_09520 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D B479_19065 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D B479_19060 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D B479_20265 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D B479_20260 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D B479_08420 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D B479_19675 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D B479_07525 molybdenum cofactor synthesis domain-containing protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D B479_22130 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D B479_19685 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D B479_08235 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D B479_08240 molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D B479_18025 MobA-like protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D B479_14535 mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ppuh00670] D B479_25140 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D B479_22425 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D B479_09295 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D B479_16235 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D B479_03790 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_02060 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D B479_06345 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D B479_23555 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D B479_00665 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D B479_05225 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_25505 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D B479_09710 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D B479_25190 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D B479_21565 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D B479_02085 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D B479_16230 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D B479_22470 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D B479_24350 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D B479_25555 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ppuh00860] D B479_07570 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D B479_04155 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D B479_23370 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D B479_14910 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D B479_01310 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D B479_01315 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D B479_24840 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D B479_00695 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D B479_18175 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D B479_02635 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D B479_04215 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D B479_01320 uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D B479_16960 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D B479_08065 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D B479_00880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_04550 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_00875 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D B479_23590 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D B479_23600 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D B479_23585 precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D B479_14310 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D B479_14305 putative cobalamin biosynthesis protein cobE K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D B479_16075 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D B479_23615 cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D B479_23610 cbiD; cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D B479_23605 precorrin-6y C5,15-methyltransferase (decarboxylating) CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D B479_23595 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D B479_06400 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D B479_12455 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D B479_21850 ATP-cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D B479_06395 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D B479_06420 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D B479_06410 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D B479_06415 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D B479_06425 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D B479_06440 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D B479_06430 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D B479_06435 alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D B479_12460 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D B479_05305 heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D B479_21805 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D B479_02895 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D B479_23735 ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1] D B479_20920 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ppuh00130] D B479_20300 hypothetical protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D B479_26315 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D B479_26320 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D B479_25610 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D B479_03245 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D B479_25520 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D B479_06820 bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D B479_25530 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D B479_24515 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D B479_02615 ubiquinone biosynthesis protein COQ7-like protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D B479_15815 ribosyldihydronicotinamide dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D B479_16385 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D B479_12095 oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D B479_06265 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D B479_14425 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ppuh00900] D B479_03115 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D B479_06040 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D B479_06120 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D B479_04120 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D B479_06140 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D B479_04760 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D B479_03555 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03245 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D B479_03120 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D B479_03870 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D B479_06030 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:ppuh00906] D B479_13325 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:ppuh00907] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_15080 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D B479_08305 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D B479_17300 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_17305 putative transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D B479_24285 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ppuh00523] D B479_07005 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D B479_06995 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D B479_01760 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D B479_06990 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D B479_07000 DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D B479_02990 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D B479_20465 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01055 Biosynthesis of vancomycin group antibiotics D B479_06995 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ppuh00946] D B479_21365 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:ppuh00311] D B479_25305 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D B479_27189 class-A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:ppuh00332] D B479_03890 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D B479_23500 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ppuh00261] D B479_16220 MbtH domain-containing protein K05375 mbtH; MbtH protein D B479_22075 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D B479_22080 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D B479_18970 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D B479_07630 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D B479_20205 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_11285 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_00050 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_07880 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D B479_22970 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ppuh00521] D B479_05335 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D B479_15285 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D B479_26180 bifunctional phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D B479_04685 protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D B479_07005 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D B479_06995 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D B479_01760 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D B479_06990 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D B479_07000 DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D B479_02990 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D B479_05335 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ppuh00525] D B479_07005 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D B479_06995 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ppuh00401] D B479_06845 bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D B479_05140 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D B479_15335 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_07550 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D B479_02565 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D B479_02580 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D B479_07475 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D B479_03415 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_12060 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07480 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07205 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D B479_07485 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ppuh00999] D B479_24295 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D B479_00700 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D B479_11860 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D B479_21365 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D B479_18085 siderophore biosynthesis protein K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ppuh00362] D B479_13475 benzoate dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D B479_13470 benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D B479_13465 oxidoreductase, FAD/NAD(P)-binding subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D B479_13460 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D B479_13450 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D B479_15785 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D B479_15780 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D B479_21490 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D B479_08305 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D B479_21505 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D B479_13025 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D B479_13120 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D B479_25875 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D B479_25865 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D B479_25870 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D B479_15525 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D B479_22555 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D B479_22560 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D B479_21495 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D B479_04950 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D B479_13065 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D B479_21485 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D B479_15610 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D B479_04730 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S D B479_15065 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D B479_20300 hypothetical protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D B479_13010 3-hydroxybutyryl-CoA epimerase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D B479_01130 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_13110 3-hydroxy-acyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D B479_16035 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:ppuh00627] D B479_13850 monooxygenase flavin-binding family protein K10215 ethA; monooxygenase [EC:1.14.13.-] D B479_14830 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_14005 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_13035 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D B479_03245 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:ppuh00364] D B479_13475 benzoate dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D B479_13470 benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D B479_13465 oxidoreductase, FAD/NAD(P)-binding subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D B479_13460 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D B479_13450 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D B479_15785 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:ppuh00625] D B479_16535 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D B479_15820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D B479_02095 formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D B479_11545 putative quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D B479_11520 quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ppuh00361] D B479_13450 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D B479_25850 monooxygenase, FAD-binding:FAD dependent oxidoreductase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] D B479_15785 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:ppuh00623] D B479_13450 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D B479_15785 muconate and chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00622 Xylene degradation [PATH:ppuh00622] D B479_13475 benzoate dioxygenase subunit alpha K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D B479_13470 benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D B479_13465 oxidoreductase, FAD/NAD(P)-binding subunit K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D B479_13460 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D B479_15525 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D B479_25875 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D B479_25865 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D B479_25870 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:ppuh00633] D B479_16340 dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D B479_10825 NADH:flavin oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D B479_08305 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:ppuh00643] D B479_14565 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D B479_22365 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D B479_22355 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D B479_22360 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D B479_14830 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_14005 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D B479_13035 putative amidohydrolase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D B479_21515 3-oxoadipate:succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D B479_21510 3-oxoadipate:succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:ppuh00791] D B479_11245 allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6] D B479_12155 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D B479_12150 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D B479_12145 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:ppuh00930] D B479_13050 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D B479_13100 enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_09035 enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D B479_08300 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:ppuh00621] D B479_15525 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D B479_25875 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D B479_25865 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D B479_25870 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:ppuh00626] D B479_16535 ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D B479_06130 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D B479_22555 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D B479_22560 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation D B479_15580 flavin reductase domain-containing protein K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ppuh03020] D B479_02720 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D B479_02725 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D B479_02880 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D B479_26240 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D B479_12125 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ppuh03010] D B479_06855 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D B479_06010 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D B479_02785 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D B479_02875 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D B479_02840 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D B479_23835 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D B479_02735 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D B479_02825 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D B479_22015 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D B479_02750 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D B479_02870 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D B479_02730 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D B479_02865 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D B479_02820 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D B479_22885 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D B479_05635 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D B479_02800 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D B479_23830 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D B479_02775 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D B479_03525 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D B479_02425 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D B479_02705 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D B479_02770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D B479_02755 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D B479_02760 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D B479_02815 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D B479_02830 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D B479_02715 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D B479_23820 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D B479_02710 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D B479_02700 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D B479_22020 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D B479_02805 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D B479_02850 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D B479_02790 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D B479_02885 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D B479_02835 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D B479_05650 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D B479_10050 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D B479_03875 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D B479_02780 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D B479_02765 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D B479_02810 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D B479_04110 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D B479_03880 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D B479_26155 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D B479_02795 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D B479_02845 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D B479_24905 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D B479_07465 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D B479_26150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D B479_00245 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D B479_10045 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D B479_02860 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D B479_r26793 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26787 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26789 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26791 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26809 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26807 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26797 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26799 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26801 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26803 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26805 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26775 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26767 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26771 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26777 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26781 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26779 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26769 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26773 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ppuh00970] D B479_t26689 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26629 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26709 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26693 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26711 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26631 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26739 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26735 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26737 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26741 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26649 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D B479_t26687 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D B479_t26669 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26701 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26703 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26699 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26673 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26729 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D B479_t26663 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D B479_t26719 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D B479_t26677 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26691 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26681 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26683 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26733 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26679 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26641 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26753 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26713 tRNA-His K14226 tRNA-His; tRNA His D B479_t26717 tRNA-His K14226 tRNA-His; tRNA His D B479_t26627 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D B479_t26707 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D B479_t26757 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D B479_t26715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26761 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26727 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26763 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26765 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26653 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D B479_t26657 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D B479_t26747 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D B479_t26637 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26759 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26661 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26749 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26751 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26635 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D B479_t26725 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26651 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26655 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26675 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26743 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26731 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26633 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D B479_t26643 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D B479_t26659 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D B479_t26645 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D B479_t26639 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D B479_t26723 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26721 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26667 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26671 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26697 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26647 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D B479_07570 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D B479_04970 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D B479_04965 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D B479_04975 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D B479_14955 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D B479_18975 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D B479_20325 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D B479_00635 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D B479_00630 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D B479_10035 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D B479_16965 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D B479_02955 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D B479_14950 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D B479_20840 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D B479_00665 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D B479_05180 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D B479_23415 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D B479_03540 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D B479_05790 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D B479_24915 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D B479_20365 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D B479_04765 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D B479_10055 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D B479_10060 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D B479_02660 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D B479_22040 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ppuh03060] D B479_02855 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D B479_02690 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D B479_22915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D B479_04670 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D B479_04675 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D B479_04665 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D B479_00230 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D B479_21870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D B479_24740 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D B479_05630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D B479_25025 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D B479_05495 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA D B479_24540 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D B479_05490 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D B479_24545 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D B479_05485 Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D B479_24550 sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D B479_21135 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D B479_03545 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ppuh04122] D B479_04705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_16325 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_24000 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D B479_25060 rhodanese domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D B479_08200 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D B479_20225 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D B479_16940 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D B479_16935 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D B479_16930 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D B479_16945 hypothetical protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D B479_17035 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D B479_19675 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D B479_07525 molybdenum cofactor synthesis domain-containing protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D B479_22125 molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D B479_04170 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D B479_22130 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D B479_19685 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D B479_08235 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D B479_24705 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D B479_24995 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:ppuh03018] D B479_25215 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D B479_07435 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D B479_22120 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D B479_06110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D B479_22880 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D B479_24365 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D B479_23270 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D B479_23845 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D B479_07275 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D B479_19195 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D B479_23100 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D B479_25615 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D B479_22980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D B479_21790 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D B479_23935 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D B479_25630 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D B479_04065 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D B479_01850 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D B479_22825 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ppuh03030] D B479_17620 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_02245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_23285 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_06085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D B479_18200 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D B479_07510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D B479_23425 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D B479_05190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D B479_00255 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D B479_23815 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_08585 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_20095 Putative DnaB-like replicative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_10265 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_02420 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D B479_02910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D B479_17625 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D B479_06080 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D B479_00945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D B479_18235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_24300 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ppuh03410] D B479_20865 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D B479_21230 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D B479_01865 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D B479_23505 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D B479_25095 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D B479_03960 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D B479_14270 alcohol dehydrogenase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D B479_00640 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D B479_11590 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D B479_15020 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D B479_26195 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D B479_00945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D B479_05705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D B479_18235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_24300 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ppuh03420] D B479_08365 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D B479_02900 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D B479_14160 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D B479_07555 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D B479_17410 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D B479_26495 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D B479_13735 putative ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D B479_00945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D B479_18235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_24300 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_12125 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:ppuh03430] D B479_06175 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D B479_23945 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D B479_26495 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D B479_13735 putative ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D B479_21575 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D B479_05415 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D B479_03125 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D B479_08510 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D B479_05705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D B479_02910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D B479_06085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D B479_00255 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D B479_18200 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D B479_23425 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D B479_07510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D B479_17620 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_02245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_23285 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_05190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D B479_18235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_24300 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ppuh03440] D B479_05705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D B479_02910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D B479_00260 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D B479_21120 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D B479_18190 recR; recombination protein RecR K06187 recR; recombination protein RecR D B479_06190 recA; recombinase A K03553 recA; recombination protein RecA D B479_00945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D B479_20310 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D B479_20305 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D B479_20315 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D B479_26285 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D B479_22700 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D B479_22705 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D B479_22695 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D B479_06085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D B479_00255 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D B479_18200 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D B479_23425 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D B479_07510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D B479_17620 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_02245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_23285 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_05190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D B479_24910 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:ppuh03450] D B479_13265 Ku family containing protein K10979 ku; DNA end-binding protein Ku D B479_13240 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:ppuh03250] D B479_19305 PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ppuh02010] D B479_18390 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D B479_25380 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D B479_25375 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D B479_25370 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D B479_25365 sulfate ABC transporter ATPase K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D B479_01600 taurine ABC transporter periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein D B479_01595 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D B479_01470 NMT1/THI5-like domain-containing protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_15030 aliphatic sulfonates ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01620 aliphatic sulfonates ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01195 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_13000 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01435 putative nitrate ABC transporter periplasmic nitrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01465 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01630 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01205 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_12995 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01440 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D B479_01460 ABC transporter-like protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01635 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01200 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01445 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_12990 taurine-transporting AtPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_16480 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D B479_13045 extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein D B479_16485 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D B479_16490 molybdate ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D B479_23850 iron ABC transporter periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D B479_25515 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D B479_25160 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D B479_23855 binding-protein-dependent transport system inner membrane protein K02011 afuB; iron(III) transport system permease protein D B479_25510 binding-protein-dependent transport system inner membrane protein K02011 afuB; iron(III) transport system permease protein D B479_25165 2-aminoethylphosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein D B479_20940 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D B479_25170 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D B479_04865 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_08920 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_26440 putative ABC transporter periplasmic polyamine-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_13550 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_15810 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_25430 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_25435 putrescine ABC transporter periplasmic putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_25415 ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein D B479_25420 binding-protein-dependent transport system inner membrane protein K11075 potH; putrescine transport system permease protein D B479_25425 spermidine/putrescine ABC transporter ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D B479_00710 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_00075 ABC transporter substrate binding protein (glycine-betaine) K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_01915 glycine betaine/L-proline ABC transporter periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_06705 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_01950 choline ABC transporter periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_15185 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_11920 putative histidine transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_00085 protein ProW K02001 proW; glycine betaine/proline transport system permease protein D B479_00090 protein ProW K02001 proW; glycine betaine/proline transport system permease protein D B479_01910 choline ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D B479_15190 binding-protein-dependent transport system inner membrane protein K02001 proW; glycine betaine/proline transport system permease protein D B479_11925 glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D B479_01905 choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D B479_00080 glycine betaine/L-proline ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D B479_11930 glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D B479_04850 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D B479_04845 binding-protein-dependent transport system inner membrane protein K05846 opuBD; osmoprotectant transport system permease protein D B479_04855 binding-protein-dependent transport system inner membrane protein K05846 opuBD; osmoprotectant transport system permease protein D B479_04840 glycine betaine/L-proline ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D B479_05370 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D B479_05110 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D B479_01035 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D B479_05105 toluene tolerance protein Ttg2C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D B479_01045 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D B479_05100 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D B479_05115 toluene tolerance protein Ttg2E K07122 mlaB; phospholipid transport system transporter-binding protein D B479_01040 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D B479_05095 toluene tolerance ABC efflux transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D B479_05355 extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D B479_05360 binding-protein-dependent transport system inner membrane protein K17316 gtsB; glucose/mannose transport system permease protein D B479_05365 binding-protein-dependent transport system inner membrane protein K17317 gtsC; glucose/mannose transport system permease protein D B479_09980 monosaccharide-transporting ATPase K10439 rbsB; ribose transport system substrate-binding protein D B479_09990 monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein D B479_09985 ribose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D B479_10005 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D B479_09290 extracellular solute-binding protein K17321 glpV; glycerol transport system substrate-binding protein D B479_09275 binding-protein-dependent transport system inner membrane protein K17322 glpP; glycerol transport system permease protein D B479_09280 binding-protein-dependent transport system inner membrane protein K17323 glpQ; glycerol transport system permease protein D B479_09265 sugar ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D B479_09270 sugar ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D B479_26375 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D B479_11345 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D B479_16305 OmpA/MotB domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D B479_26370 binding-protein-dependent transport system inner membrane protein K02037 pstC; phosphate transport system permease protein D B479_11350 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D B479_26365 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D B479_11355 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D B479_26360 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D B479_11360 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D B479_04605 phosphonate ABC transporter periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D B479_04615 binding-protein-dependent transport system inner membrane protein K02042 phnE; phosphonate transport system permease protein D B479_04620 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D B479_04610 phosphonates import ATP-binding protein phnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D B479_20975 extracellular solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D B479_20985 polar amino acid ABC transporter inner membrane subunit K10002 gltK; glutamate/aspartate transport system permease protein D B479_20980 glutamate/aspartate ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D B479_20990 glutamate-aspartate ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D B479_22110 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D B479_22105 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D B479_22100 polar amino acid ABC transporter inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein D B479_22095 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_01565 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D B479_25270 periplasmic binding protein from ABC-type transporter K02424 tcyA; L-cystine transport system substrate-binding protein D B479_01560 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D B479_01555 amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D B479_19040 cationic amino acid ABC transporter periplasmic binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D B479_19030 polar amino acid ABC transporter inner membrane subunit K10023 aotM; arginine/ornithine transport system permease protein D B479_19035 polar amino acid ABC transporter inner membrane subunit K10024 aotQ; arginine/ornithine transport system permease protein D B479_19025 arginine/ornithine transport ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D B479_01830 amino acid ABC transporter periplasmic amino acid-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D B479_01825 polar amino acid ABC transporter inner membrane subunit K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D B479_01820 polar amino acid ABC transporter inner membrane subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D B479_01835 amino acid ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D B479_23785 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D B479_20655 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D B479_23780 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D B479_20660 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D B479_23775 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D B479_20665 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D B479_20670 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D B479_23770 Branched chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D B479_23765 Branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D B479_20675 branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D B479_00890 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D B479_01535 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D B479_25335 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D B479_00895 binding-protein-dependent transport system inner membrane protein K02072 metI; D-methionine transport system permease protein D B479_01525 binding-protein-dependent transport system inner membrane protein K02072 metI; D-methionine transport system permease protein D B479_00900 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D B479_01530 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D B479_23660 urea ABC transporter urea binding protein K11959 urtA; urea transport system substrate-binding protein D B479_23665 urea ABC transporter permease UrtB K11960 urtB; urea transport system permease protein D B479_23670 urea ABC transporter permease UrtC K11961 urtC; urea transport system permease protein D B479_23675 branched-chain amino acid ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D B479_23680 urea ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D B479_04905 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04915 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04920 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_26160 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04900 alkaline phosphatase K12369 dppB; dipeptide transport system permease protein D B479_04895 binding-protein-dependent transport system inner membrane protein K12370 dppC; dipeptide transport system permease protein D B479_04890 oligopeptide/dipeptide ABC transporter ATPase K12371 dppD; dipeptide transport system ATP-binding protein D B479_04885 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein D B479_17645 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D B479_17650 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D B479_12750 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D B479_17655 binding-protein-dependent transport system inner membrane protein K13894 yejB; microcin C transport system permease protein D B479_12745 binding-protein-dependent transport system inner membrane protein K13894 yejB; microcin C transport system permease protein D B479_17660 binding-protein-dependent transport system inner membrane protein K13895 yejE; microcin C transport system permease protein D B479_12740 binding-protein-dependent transport system inner membrane protein K13895 yejE; microcin C transport system permease protein D B479_17665 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D B479_03110 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D B479_00930 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D B479_16185 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D B479_00915 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D B479_16195 putative ABC transport protein K09816 znuB; zinc transport system permease protein D B479_00920 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D B479_16190 cation ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D B479_08395 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D B479_08405 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D B479_08400 lolD; lipoprotein transporter ATP-binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D B479_18480 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D B479_18485 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D B479_18490 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D B479_18495 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D B479_05205 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D B479_05210 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein D B479_05070 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D B479_25015 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D B479_25020 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D B479_24120 lipid A ABC exporter, fused ATPase, and inner membrane MsbA subunits K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D B479_19310 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D B479_11230 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D B479_01175 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D B479_10955 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D B479_17960 macrolide transporter ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D B479_19515 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D B479_09160 ABC transporter K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ppuh02060] D B479_04440 mulitfunctional PTS system fructose-like transporter subunit IIA/phosphocarrier protein HPr/phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D B479_04450 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D B479_04445 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D B479_25210 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D B479_05045 phosphotransferase system, phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D B479_05055 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ppuh03070] D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_05520 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D B479_14680 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D B479_05515 type II secretion protein C K02452 gspC; general secretion pathway protein C D B479_05530 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D B479_14380 type II secretion system protein K02455 gspF; general secretion pathway protein F D B479_05535 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D B479_14375 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D B479_14670 type II secretion system protein G K02456 gspG; general secretion pathway protein G D B479_14675 secretion type II protein K02456 gspG; general secretion pathway protein G D B479_05540 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D B479_05545 type II secretion system protein I/J K02458 gspI; general secretion pathway protein I D B479_05550 type II secretion system protein J K02459 gspJ; general secretion pathway protein J D B479_05500 general secretion pathway protein K K02460 gspK; general secretion pathway protein K D B479_05555 general secretion pathway protein L K02461 gspL; general secretion pathway protein L D B479_05525 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D B479_25485 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D B479_14705 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D B479_04670 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D B479_04675 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D B479_02690 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D B479_22915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D B479_02855 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D B479_04665 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D B479_00230 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D B479_21870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D B479_25025 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D B479_24740 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D B479_05630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D B479_05495 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA D B479_24540 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D B479_05490 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D B479_24545 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D B479_05485 Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D B479_24550 sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D B479_05575 TPS family activation/secretion protein K11017 shlB; hemolysin activation/secretion protein D B479_05570 filamentous hemagglutinin outer membrane protein K11016 shlA; hemolysin D B479_14600 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D B479_14065 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D B479_11260 ImpA family type VI secretion-associated protein K11904 vgrG; type VI secretion system secreted protein VgrG D B479_01210 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_23875 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_23895 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_22650 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_14150 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_04150 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_14120 putative lipoprotein K11906 vasD; type VI secretion system protein VasD D B479_15905 hypothetical protein K11891 impL; type VI secretion system protein ImpL D B479_17350 ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14135 ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14145 OmpA/MotB domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_17380 hypothetical protein K11892 impK; type VI secretion system protein ImpK D B479_14130 hypothetical protein K11892 impK; type VI secretion system protein ImpK D B479_11255 hypothetical protein K11892 impK; type VI secretion system protein ImpK D B479_14115 type VI secretion ATPase K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:ppuh02020] D B479_26335 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D B479_26330 transcriptional regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D B479_26375 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D B479_11345 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D B479_16305 OmpA/MotB domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D B479_20445 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D B479_20450 two component transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D B479_01670 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D B479_01665 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D B479_19130 two component transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D B479_20470 integral membrane sensor signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D B479_20475 two component transcriptional regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D B479_21150 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D B479_02145 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D B479_02140 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D B479_15320 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D B479_15315 acriflavin resistance protein K07788 mdtB; multidrug efflux pump D B479_15310 acriflavin resistance protein K07789 mdtC; multidrug efflux pump D B479_04480 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00335 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00470 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_08410 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_21110 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_04485 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00330 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00465 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00550 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_21105 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_08415 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00355 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D B479_00345 RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D B479_00350 CzcA family heavy metal efflux protein K07787 cusA; copper/silver efflux system protein D B479_11040 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_18000 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_11035 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D B479_18005 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D B479_18750 flagellin K02406 fliC; flagellin D B479_18605 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D B479_18580 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D B479_23990 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D B479_17715 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D B479_17710 two component transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D B479_17730 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D B479_17725 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D B479_17720 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D B479_17735 K+-transporting ATPase F K01545 kdpF; potassium-transporting ATPase KdpF subunit D B479_21195 integral membrane sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D B479_21200 two component transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D B479_21220 putative tricarboxylate transport protein TctA K07793 tctA; putative tricarboxylic transport membrane protein D B479_21215 putative tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein D B479_21210 tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein D B479_00875 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D B479_00250 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D B479_20380 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D B479_09900 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_20360 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_25995 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_06305 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D B479_06300 two component transcriptional regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR D B479_09170 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor D B479_01305 LytTR family two component transcriptional regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D B479_22150 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132] D B479_11505 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D B479_06295 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D B479_17415 two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D B479_11510 two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D B479_20160 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_16500 carbon storage regulator K03563 csrA; carbon storage regulator D B479_19880 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_18965 carbon storage regulator K03563 csrA; carbon storage regulator D B479_06730 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_08120 PAS/PAC sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D B479_14325 Hpt sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D B479_14320 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_08125 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_20875 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_12310 ampC; beta-lactamase/D-alanine carboxypeptidase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D B479_03380 two component LuxR family transcriptional regulator K27077 pprB; two-component system, NarL family, response regulator PprB D B479_09625 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09610 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09605 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09600 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09615 type 1 pili usher pathway chaperone CsuC K07346 fimC; fimbrial chaperone protein D B479_09620 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D B479_21340 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D B479_21325 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D B479_21320 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D B479_21295 CheY family response regulator K02282 cpaE; pilus assembly protein CpaE D B479_21290 pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D B479_21285 protein TadB K12510 tadB; tight adherence protein B D B479_21280 type II secretion system protein membrane protein K12511 tadC; tight adherence protein C D B479_06000 glnD; PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D B479_24720 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D B479_24725 nitrogen metabolism transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D B479_25445 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_25455 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_13545 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_26230 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_19335 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_11380 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_15670 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_22820 two component sigma54 specific Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D B479_14355 two component sigma54 specific Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D B479_13680 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_01755 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D B479_21370 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D B479_21375 two component sigma-54 specific Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D B479_01750 two component sigma54 specific Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D B479_13070 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_09235 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_20440 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_11750 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_05065 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D B479_03660 fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA D B479_00990 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D B479_00995 two component sigma-54 specific Fis family transcriptional regulator K11384 algB; two-component system, NtrC family, response regulator AlgB D B479_16060 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D B479_18860 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D B479_13185 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D B479_21545 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_09205 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_13760 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_22570 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_14330 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_02050 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_15180 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_07055 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_11310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_03430 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_20250 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_24560 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_24565 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_12230 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_08220 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_04385 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_08175 methyl-accepting chemotaxis sensory transducer K03776 aer; aerotaxis receptor D B479_09240 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D B479_19220 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D B479_17345 Pas/Pac sensor-containing chemotaxis sensory transducer K03776 aer; aerotaxis receptor D B479_18560 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D B479_18565 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D B479_18590 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D B479_18600 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D B479_18585 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_16055 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_04510 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_08270 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_18865 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_24410 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D B479_24415 CheW protein K02659 pilI; twitching motility protein PilI D B479_24405 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D B479_24425 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG D B479_24420 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH D B479_24400 CheW domain-containing protein K06598 chpC; chemosensory pili system protein ChpC D B479_05755 CheR-like methyltransferase K13486 wspC; chemotaxis protein methyltransferase WspC D B479_05745 methyl-accepting chemotaxis sensory transducer K13487 wspA; methyl-accepting chemotaxis protein WspA D B479_05750 CheW protein K13488 wspB; chemotaxis-related protein WspB D B479_05760 CheW protein K13489 wspD; chemotaxis-related protein WspD D B479_05765 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D B479_05770 chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D B479_05775 response regulator receiver modulated diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D B479_09590 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D B479_15155 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D B479_15150 LuxR family DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D B479_18725 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D B479_18720 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D B479_18715 Two component, sigma54 specific, Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D B479_20995 integral membrane sensor signal transduction histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D B479_21000 two component sigma54 specific Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR D B479_20990 glutamate-aspartate ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D B479_20985 polar amino acid ABC transporter inner membrane subunit K10002 gltK; glutamate/aspartate transport system permease protein D B479_20980 glutamate/aspartate ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D B479_20975 extracellular solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D B479_09975 glutaminase-asparaginase K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38] D B479_02600 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D B479_10655 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D B479_04930 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D B479_04935 two component Fis family transcriptional regulator K15012 regA; two-component system, response regulator RegA D B479_22010 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D B479_22005 cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D B479_22000 ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D B479_18110 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D B479_18130 cbb3-type cytochrome c oxidase subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D B479_18115 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D B479_18135 cbb3-type cytochrome c oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D B479_18120 CcoQ_2 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D B479_18140 cbb3-type cytochrome c oxidase, CcoQ subunit K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D B479_18125 cbb3-type cytochrome c oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D B479_18145 cbb3-type cytochrome c oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D B479_22535 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D B479_22530 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_13665 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D B479_07425 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D B479_07010 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D B479_02240 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D B479_15280 ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D B479_01150 ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D B479_04830 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_22300 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_03945 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_02235 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_15170 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_15275 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_05315 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_11790 putative transmembrane sensor K07165 fecR; transmembrane sensor D B479_01145 anti-FecI sigma factor FecR K07165 fecR; transmembrane sensor D B479_07310 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D B479_17785 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_11470 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_18670 Hpt protein K20976 hptB; histidine phosphotransfer protein HptB D B479_18675 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D B479_18680 anti-sigma-factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D B479_18875 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:ppuh04148] D B479_04820 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D B479_22010 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ppuh02024] D B479_23935 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D B479_02565 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D B479_02580 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D B479_09435 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D B479_07265 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D B479_12760 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D B479_11040 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_18000 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_11035 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D B479_18005 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D B479_17710 two component transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D B479_22870 antibiotic biosynthesis monooxygenase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D B479_10730 hypothetical protein K20268 rhiA; rhizosphere induced protein D B479_11190 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_12275 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_05735 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_02540 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_06630 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_16285 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_05720 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_02550 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_06615 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_11210 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_16295 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_05725 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_02545 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_06620 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_11215 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_16290 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_02535 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_05730 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_06610 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_11220 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_16300 Polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_23785 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D B479_20655 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D B479_23780 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D B479_20660 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D B479_23775 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D B479_20665 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D B479_20670 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D B479_23770 Branched chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D B479_23765 Branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D B479_20675 branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D B479_12545 hypothetical protein K20276 bapA; large repetitive protein D B479_19345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_19350 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_02600 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D B479_00925 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D B479_03100 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D B479_03060 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D B479_15420 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D B479_07980 RND family efflux transporter MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system D B479_07985 acriflavin resistance protein K18307 mexI; multidrug efflux pump D B479_25820 toluene efflux pump outer membrane protein TtgI K18139 oprM; outer membrane protein, multidrug efflux system D B479_21465 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_17965 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_00230 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D B479_02690 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D B479_22915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D B479_02855 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D B479_04665 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D B479_21870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D B479_25025 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D B479_24740 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D B479_05630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa [PATH:ppuh02025] D B479_24410 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D B479_24415 CheW protein K02659 pilI; twitching motility protein PilI D B479_24405 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D B479_24400 CheW domain-containing protein K06598 chpC; chemosensory pili system protein ChpC D B479_24420 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH D B479_24425 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG D B479_24050 Icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D B479_02600 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D B479_18725 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D B479_02565 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D B479_02580 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D B479_06295 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D B479_23355 integral membrane sensor signal transduction histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D B479_23565 integral membrane sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS D B479_17415 two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D B479_11510 two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D B479_20160 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_16500 carbon storage regulator K03563 csrA; carbon storage regulator D B479_19880 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_18965 carbon storage regulator K03563 csrA; carbon storage regulator D B479_06730 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_07310 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D B479_17785 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_11470 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_18670 Hpt protein K20976 hptB; histidine phosphotransfer protein HptB D B479_18675 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D B479_18680 anti-sigma-factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D B479_18875 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D B479_18605 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D B479_14140 hypothetical protein K11890 impM; type VI secretion system protein ImpM D B479_15905 hypothetical protein K11891 impL; type VI secretion system protein ImpL D B479_17350 ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14135 ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14145 OmpA/MotB domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14125 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D B479_14155 ImpA family type VI secretion-associated protein K11902 impA; type VI secretion system protein ImpA D B479_17365 hypothetical protein K11901 impB; type VI secretion system protein ImpB D B479_14090 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D B479_17370 hypothetical protein K11900 impC; type VI secretion system protein ImpC D B479_14095 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D B479_01210 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_23875 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_23895 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_22650 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_14150 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_04150 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_15900 hypothetical protein K11895 impH; type VI secretion system protein ImpH D B479_14110 hypothetical protein K11895 impH; type VI secretion system protein ImpH D B479_14115 type VI secretion ATPase K11907 vasG; type VI secretion system protein VasG D B479_05745 methyl-accepting chemotaxis sensory transducer K13487 wspA; methyl-accepting chemotaxis protein WspA D B479_05765 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D B479_05750 CheW protein K13488 wspB; chemotaxis-related protein WspB D B479_05760 CheW protein K13489 wspD; chemotaxis-related protein WspD D B479_05770 chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D B479_05775 response regulator receiver modulated diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D B479_22685 diguanylate cyclase K21021 tpbB; diguanylate cyclase [EC:2.7.7.65] D B479_10940 PAS/PAC sensor-containing diguanylate cyclase K21021 tpbB; diguanylate cyclase [EC:2.7.7.65] D B479_15300 diguanylate cyclase/phosphodiesterase K21023 mucR; diguanylate cyclase [EC:2.7.7.65] D B479_21725 diguanylate cyclase/phosphodiesterase K21024 bifA; c-di-GMP phosphodiesterase [EC:3.1.4.52] D B479_22205 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D B479_08245 group 1 glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH D B479_22160 type IV pilus assembly PilZ K19291 alg44; mannuronan synthase [EC:2.4.1.33] C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ppuh02030] D B479_21545 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_09205 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_13760 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_22570 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_14330 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_02050 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_15180 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_07055 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_11310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_03430 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_20250 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_24560 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_24565 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_12230 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_08220 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_04385 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_08175 methyl-accepting chemotaxis sensory transducer K03776 aer; aerotaxis receptor D B479_09240 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D B479_19220 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D B479_17345 Pas/Pac sensor-containing chemotaxis sensory transducer K03776 aer; aerotaxis receptor D B479_09980 monosaccharide-transporting ATPase K10439 rbsB; ribose transport system substrate-binding protein D B479_04905 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04915 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04920 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_26160 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_18590 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D B479_18560 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D B479_18565 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D B479_18600 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D B479_18595 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D B479_18585 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_16055 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_13185 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D B479_04510 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_08270 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_18865 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_16060 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D B479_18860 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D B479_18700 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D B479_18655 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D B479_18650 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D B479_18580 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D B479_23990 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D B479_18575 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D B479_23985 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ppuh02040] D B479_18710 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D B479_18705 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D B479_18700 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D B479_18695 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D B479_18690 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D B479_18685 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D B479_18665 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D B479_18660 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D B479_25590 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL D B479_18655 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D B479_18650 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D B479_18645 flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ D B479_18640 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D B479_18635 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D B479_18630 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D B479_18620 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D B479_18625 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D B479_18870 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D B479_18855 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D B479_18850 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D B479_18845 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D B479_18840 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D B479_18830 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D B479_18825 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D B479_18820 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D B479_18815 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D B479_18810 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D B479_18805 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D B479_18800 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D B479_20890 OmpA/MotB domain-containing protein K21218 motY; sodium-type flagellar protein MotY D B479_18750 flagellin K02406 fliC; flagellin D B479_18740 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D B479_18735 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D B479_18730 hypothetical protein K02423 fliT; flagellar protein FliT D B479_18580 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D B479_23990 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D B479_18575 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D B479_23985 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D B479_18875 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D B479_18880 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN D B479_01565 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D B479_25270 periplasmic binding protein from ABC-type transporter K02424 tcyA; L-cystine transport system substrate-binding protein D B479_02415 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D B479_18725 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D B479_05065 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D B479_18715 Two component, sigma54 specific, Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D B479_18605 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D B479_06110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:ppuh04980] D B479_21850 ATP-cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D B479_09710 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ppuh01501] D B479_09900 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_20360 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_25995 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_21820 AmpG-related permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D B479_08345 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D B479_08350 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D B479_12310 ampC; beta-lactamase/D-alanine carboxypeptidase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D B479_27189 class-A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D B479_21455 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_14525 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21750 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_25830 toluene efflux pump periplasmic linker protein TtgG K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21460 hydrophobe/amphiphile efflux-1 (HAE1) family protein K18138 acrB; multidrug efflux pump D B479_25825 toluene efflux pump membrane transporter TtgH K18138 acrB; multidrug efflux pump D B479_21755 multidrug efflux protein K18138 acrB; multidrug efflux pump D B479_14530 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D B479_25820 toluene efflux pump outer membrane protein TtgI K18139 oprM; outer membrane protein, multidrug efflux system D B479_21465 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_17965 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_24890 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D B479_15945 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D B479_23480 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D B479_21940 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D B479_26994 Vim-1 K18781 blaVIM; metallo-beta-lactamase class B VIM [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:ppuh01502] D B479_21900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D B479_26090 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D B479_21930 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D B479_21925 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D B479_21910 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppuh01503] D B479_20445 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D B479_20450 two component transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D B479_19645 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D B479_00445 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D B479_19130 two component transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D B479_23950 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D B479_21150 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D B479_00965 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D B479_19305 PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D B479_21455 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_14525 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21750 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_25830 toluene efflux pump periplasmic linker protein TtgG K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21460 hydrophobe/amphiphile efflux-1 (HAE1) family protein K18138 acrB; multidrug efflux pump D B479_25825 toluene efflux pump membrane transporter TtgH K18138 acrB; multidrug efflux pump D B479_21755 multidrug efflux protein K18138 acrB; multidrug efflux pump D B479_14530 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_06070 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D B479_20380 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ppuh01000] C 01001 Protein kinases [BR:ppuh01001] D B479_14915 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D B479_13650 non-specific protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D B479_26335 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D B479_20445 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D B479_01670 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D B479_20470 integral membrane sensor signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D B479_02145 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D B479_04480 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00335 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00470 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_08410 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_21110 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_11040 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_18000 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_17715 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D B479_21195 integral membrane sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D B479_06305 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D B479_14515 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D B479_19140 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D B479_11505 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D B479_06295 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D B479_08120 PAS/PAC sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D B479_14325 Hpt sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D B479_24720 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D B479_01755 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D B479_21370 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D B479_00990 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D B479_12525 sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D B479_18590 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D B479_24405 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D B479_05765 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D B479_09590 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D B479_15155 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D B479_18720 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D B479_04930 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D B479_07310 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D B479_17785 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_11470 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_23355 integral membrane sensor signal transduction histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D B479_23565 integral membrane sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS C 01009 Protein phosphatases and associated proteins [BR:ppuh01009] D B479_24345 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D B479_17815 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D B479_24010 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ppuh01002] D B479_03545 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D B479_03650 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D B479_03385 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D B479_21335 protein TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D B479_05440 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D B479_15375 peptidase C26 K07010 K07010; putative glutamine amidotransferase D B479_26225 peptidase C26 K07010 K07010; putative glutamine amidotransferase D B479_11385 peptidase C26 K07010 K07010; putative glutamine amidotransferase D B479_24930 NLP/P60 protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D B479_07675 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D B479_24850 gltB; glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D B479_00145 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D B479_06750 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D B479_21620 PfpI family intracellular peptidase K05520 yhbO; deglycase [EC:3.5.1.124] D B479_25105 PfpI family intracellular peptidase K05520 yhbO; deglycase [EC:3.5.1.124] D B479_09420 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D B479_07760 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D B479_00810 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D B479_00820 peptidase M3A and M3B, thimet/oligopeptidase F K01414 prlC; oligopeptidase A [EC:3.4.24.70] D B479_25045 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D B479_25050 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D B479_25030 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D B479_25035 peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D B479_05195 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D B479_01990 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D B479_17975 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D B479_05950 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D B479_14015 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D B479_06005 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D B479_06540 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D B479_09145 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D B479_25535 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D B479_22935 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D B479_07290 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D B479_20230 peptidase M48 Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D B479_06045 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D B479_03200 hypothetical protein K09933 mtfA; MtfA peptidase D B479_21150 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D B479_22090 2-alkenal reductase K04691 hhoB; serine protease DegS [EC:3.4.21.-] D B479_19590 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D B479_23460 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D B479_16150 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D B479_08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D B479_09320 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D B479_09330 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D B479_21080 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D B479_13720 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D B479_08330 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D B479_21135 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D B479_24600 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D B479_06595 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D B479_24765 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D B479_25305 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D B479_07450 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D B479_16625 inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-] D B479_07745 rhomboid family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D B479_23440 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D B479_20025 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D B479_24465 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D B479_22575 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_15055 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D B479_08975 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D B479_14825 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D B479_05025 C69 family peptidase K03592 pmbA; PmbA protein D B479_05015 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein D B479_12715 ecotin K08276 eco; ecotin D B479_03360 alpha-2-macroglobulin domain-containing protein K06894 yfhM; alpha-2-macroglobulin D B479_23920 HflC protein K04087 hflC; modulator of FtsH protease HflC D B479_23925 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:ppuh01003] D B479_21550 group 1 glycosyl transferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D B479_17175 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D B479_25005 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D B479_03370 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D B479_22750 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D B479_24890 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D B479_08245 group 1 glycosyl transferase K21001 pslH; polysaccharide biosynthesis protein PslH D B479_22155 glycosyl transferase Alg8 K19290 alg8; mannuronan synthase [EC:2.4.1.33] D B479_24585 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D B479_13615 glycosyl transferase family protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ppuh01005] D B479_06070 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D B479_06075 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D B479_21880 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D B479_06060 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D B479_14965 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D B479_07410 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D B479_00645 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D B479_06675 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D B479_19525 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D B479_16400 aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D B479_24085 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D B479_04180 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D B479_13510 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D B479_20075 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D B479_19645 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D B479_00445 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D B479_06105 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D B479_07420 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D B479_05085 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D B479_05090 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D B479_02190 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D B479_02185 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D B479_02195 lipopolysaccharide core biosynthesis protein WaaG K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D B479_02200 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D B479_11085 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D B479_21975 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D B479_00625 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D B479_24115 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D B479_06980 glycosyl transferase family protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-] D B479_06925 putative B-band O-antigen polymerase K26858 wzy; O-antigen polymerase [EC:2.4.99.27] D B479_06885 hypothetical protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D B479_00490 ribonuclease III K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppuh01011] D B479_05125 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D B479_07430 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D B479_21905 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D B479_21920 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D B479_21935 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D B479_21900 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D B479_26090 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D B479_04175 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D B479_23440 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D B479_21925 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D B479_21910 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D B479_07030 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D B479_12235 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D B479_03530 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D B479_24890 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D B479_22750 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D B479_03370 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D B479_15945 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D B479_23480 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D B479_21940 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D B479_23460 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D B479_08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D B479_16150 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D B479_25005 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D B479_09420 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D B479_24930 NLP/P60 protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D B479_08280 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D B479_24315 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D B479_23435 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D B479_23470 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D B479_17640 MltD domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D B479_05470 membrane-bound lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D B479_07500 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D B479_04960 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D B479_23465 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D B479_23950 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D B479_00980 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D B479_04420 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ppuh01004] D B479_07475 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D B479_18755 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D B479_17795 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D B479_12050 beta-ketoacyl synthase-like protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_12045 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_07490 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D B479_03415 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_12060 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07480 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_07205 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D B479_17790 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D B479_06065 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D B479_22445 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D B479_09410 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D B479_23245 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D B479_26385 Thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D B479_01515 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D B479_09015 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_22850 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_19045 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D B479_09560 AMP-dependent synthetase and ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D B479_12710 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D B479_15840 putative acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_12985 CoA-binding domain-containing protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D B479_19345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_19350 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_17235 AMP-binding domain protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D B479_14540 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D B479_05930 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D B479_07470 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D B479_02435 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D B479_00620 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D B479_07180 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ppuh01008] D B479_16220 MbtH domain-containing protein K05375 mbtH; MbtH protein D B479_20465 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] C 01006 Prenyltransferases [BR:ppuh01006] D B479_03120 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D B479_03870 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D B479_06030 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D B479_23940 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D B479_26320 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D B479_00880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_04550 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ppuh01007] D B479_07570 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D B479_14955 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D B479_22805 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D B479_02660 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D B479_22040 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D B479_14950 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D B479_24915 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D B479_20840 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D B479_03540 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D B479_05180 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D B479_23415 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D B479_05790 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D B479_20325 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D B479_04765 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D B479_00635 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D B479_00630 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D B479_16965 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D B479_20365 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D B479_10035 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D B479_18975 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D B479_10055 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D B479_10060 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D B479_07295 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D B479_04555 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D B479_15335 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_07550 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D B479_04790 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D B479_15825 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D B479_05995 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D B479_05140 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D B479_02295 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D B479_03495 beta alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D B479_01500 4-aminobutyrate aminotransferase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19] D B479_02340 class III aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D B479_19015 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D B479_13875 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D B479_17995 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D B479_11390 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D B479_25440 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D B479_11120 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D B479_24385 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D B479_23370 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D B479_12445 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D B479_08990 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D B479_06835 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D B479_06915 UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D B479_18765 TDP-4-oxo-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ppuh00194] D B479_00160 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D B479_00165 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D B479_00170 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D B479_00175 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D B479_00180 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D B479_00185 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D B479_00190 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D B479_00195 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D B479_00200 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ppuh03000] D B479_10615 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_08490 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_10125 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_03675 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_15070 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D B479_15570 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D B479_08780 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D B479_22290 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D B479_12940 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D B479_03965 methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D B479_11815 ftrA; transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D B479_01955 AraC family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D B479_19020 AraC family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator D B479_11655 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D B479_11670 hypothetical protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D B479_01925 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D B479_12370 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D B479_00095 putative transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D B479_03755 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_16555 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_13575 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_21420 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_18935 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_19085 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_17285 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_26040 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_26050 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_09780 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_17455 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D B479_06560 LysR family transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D B479_21015 transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D B479_09930 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D B479_26280 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D B479_21685 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D B479_02335 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D B479_09450 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D B479_11725 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC D B479_13995 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D B479_13695 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D B479_12100 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D B479_15740 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D B479_13075 transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D B479_07905 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D B479_26420 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D B479_03490 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D B479_25175 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D B479_26475 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D B479_15790 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D B479_09555 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D B479_00750 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D B479_20960 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D B479_09995 alanine racemase K02529 galR; LacI family transcriptional regulator, galactose operon repressor D B479_14210 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D B479_04435 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D B479_14335 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D B479_24640 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D B479_01420 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B479_07990 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B479_17330 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D B479_23020 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D B479_09230 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D B479_15400 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D B479_15970 DNA-binding transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D B479_26445 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B479_16005 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B479_11295 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B479_07875 aminotransferase domain-containing GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B479_11900 MocR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B479_14935 DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D B479_15615 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator D B479_26849 tetracycline repressor protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D B479_24785 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D B479_21450 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D B479_25840 truncated transcriptional regulator TtgW K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D B479_03485 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D B479_17150 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D B479_18340 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D B479_12325 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D B479_05885 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D B479_13795 NfxB family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D B479_13775 NfxB family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D B479_23750 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D B479_23280 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_26100 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_18405 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_23330 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_18905 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_09250 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_22060 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_25475 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D B479_12935 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D B479_19665 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D B479_04325 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D B479_01240 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D B479_19190 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D B479_07240 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D B479_00020 transcriptional regulator MerR K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D B479_27194 transcriptional regulator MerR K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D B479_27214 transcriptional regulator MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D B479_26615 transcriptional regulator MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D B479_03435 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D B479_11780 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D B479_12090 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D B479_07975 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D B479_11455 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D B479_22415 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D B479_04195 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D B479_23000 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D B479_00925 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D B479_11145 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D B479_11185 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D B479_21525 pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D B479_02600 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D B479_18180 Crp/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D B479_11955 CRP/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D B479_12000 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D B479_04700 BadM/Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D B479_11720 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D B479_26480 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D B479_05385 DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D B479_02665 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D B479_23550 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D B479_13925 Fis family transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D B479_00570 DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D B479_18725 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D B479_03235 Fis family GAF modulated sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D B479_09260 Fis family GAF modulated sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D B479_14590 Fis family GAF modulated sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D B479_03295 GAF modulated sigma-54 specific Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D B479_04515 anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D B479_13400 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D B479_02280 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D B479_05985 virulence gene repressor K07726 K07726; putative transcriptional regulator D B479_13560 DNA-binding protein K07726 K07726; putative transcriptional regulator D B479_10235 Cro repressor K07729 K07729; putative transcriptional regulator D B479_24180 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D B479_06780 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D B479_13940 Putative ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D B479_00205 ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D B479_13360 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D B479_13365 TenA family transcription regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D B479_19055 PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D B479_05265 sigma-54 dependent transcriptional regulator/sensory box protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D B479_20210 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D B479_13090 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D B479_25660 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D B479_24450 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D B479_23190 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein D B479_26450 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D B479_24440 hypothetical protein K07735 algH; putative transcriptional regulator D B479_26590 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D B479_22800 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D B479_27239 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D B479_09050 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D B479_03055 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D B479_21955 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ppuh03021] D B479_12125 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D B479_02880 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D B479_02720 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D B479_02725 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D B479_26240 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D B479_02415 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D B479_06165 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D B479_21165 algU; RNA polymerase sigma factor AlgU K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D B479_08055 RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D B479_12360 ECF subfamily RNA polymerase sigma-24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D B479_19365 RNA polymerase ECF-subfamily sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D B479_02240 RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D B479_15280 ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D B479_01150 ECF subfamily RNA polymerase sigma-24 factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily D B479_25010 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D B479_05065 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D B479_18605 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D B479_20630 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D B479_22905 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D B479_03080 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D B479_02695 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D B479_21995 glutathione S-transferase domain-containing protein K03599 sspA; stringent starvation protein A D B479_21990 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D B479_08445 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D B479_21160 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D B479_21155 sigma E regulatory protein MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D B479_26590 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D B479_22800 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D B479_27239 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D B479_09050 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D B479_22955 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D B479_09395 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D B479_25615 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ppuh03019] D B479_07435 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D B479_05000 cytoplasmic axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D B479_21130 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D B479_23845 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D B479_23975 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D B479_22120 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D B479_24365 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D B479_23270 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D B479_07275 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D B479_19195 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D B479_23100 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D B479_06110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D B479_22880 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D B479_25615 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D B479_22980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D B479_21790 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D B479_23935 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D B479_25630 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D B479_04065 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D B479_01850 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D B479_22825 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D B479_25215 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D B479_20160 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_16500 carbon storage regulator K03563 csrA; carbon storage regulator D B479_19880 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_18965 carbon storage regulator K03563 csrA; carbon storage regulator D B479_06730 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D B479_08035 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D B479_05050 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ D B479_19330 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D B479_23305 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ppuh03011] D B479_06855 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D B479_06010 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D B479_02785 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D B479_02875 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D B479_02840 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D B479_23835 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D B479_02735 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D B479_02825 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D B479_22015 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D B479_02750 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D B479_02870 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D B479_02730 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D B479_02865 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D B479_02820 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D B479_22885 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D B479_05635 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D B479_02800 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D B479_23830 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D B479_02775 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D B479_03525 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D B479_02425 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D B479_02705 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D B479_02770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D B479_02755 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D B479_02760 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D B479_02815 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D B479_02830 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D B479_23820 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D B479_02710 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D B479_02700 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D B479_02715 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D B479_22020 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D B479_02805 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D B479_02850 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D B479_02790 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D B479_02885 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D B479_02835 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D B479_05650 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D B479_10050 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D B479_03875 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D B479_02780 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D B479_02765 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D B479_02810 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D B479_03880 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D B479_26155 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D B479_02795 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D B479_02845 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D B479_24905 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D B479_07465 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D B479_26150 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D B479_00245 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D B479_10045 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D B479_02860 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D B479_04110 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D B479_r26775 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26767 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26771 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26777 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26781 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26779 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26769 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26773 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26793 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26787 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26789 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26791 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26809 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26807 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26797 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26799 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26801 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26803 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26805 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ppuh03009] D B479_21130 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D B479_14915 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D B479_23975 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D B479_21125 era; GTPase Era K03595 era; GTPase D B479_03885 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D B479_26590 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D B479_22800 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D B479_27239 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D B479_09050 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D B479_22905 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D B479_03080 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D B479_02695 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D B479_21250 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D B479_02485 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D B479_00660 16S rRNA methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D B479_04300 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D B479_25040 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D B479_24390 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D B479_00215 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D B479_21950 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D B479_21960 uroporphyrin-III C/tetrapyrrole methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D B479_05875 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D B479_05945 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D B479_23840 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D B479_22940 rrmJ; 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D B479_05175 23S rRNA mA1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D B479_22520 rRNA (guanine-N(2)-)-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D B479_23485 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D B479_18395 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D B479_25110 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D B479_24170 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D B479_08100 rlmL; 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D B479_08195 23S rRNA C2498 ribose 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D B479_04745 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D B479_06315 rumA; 23S rRNA m(5)U1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D B479_06655 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D B479_08170 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D B479_19095 RNA-binding S4 domain-containing protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D B479_07440 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D B479_03600 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D B479_23340 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D B479_20425 RNA-binding S4 domain-containing protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D B479_03920 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D B479_01675 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D B479_05640 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D B479_20395 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D B479_15450 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D B479_23535 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D B479_07095 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D B479_17050 cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D B479_07435 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D B479_05000 cytoplasmic axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-] D B479_24445 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D B479_24220 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D B479_07275 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D B479_19265 DEAD/DEAH box helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D B479_23980 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D B479_04780 GTP-binding protein Der K03977 engA; GTPase D B479_23930 GTP-binding protein HflX K03665 hflX; GTPase D B479_00680 SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D B479_26245 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D B479_22895 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D B479_22910 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D B479_23490 iojap family protein K09710 ybeB; ribosome-associated protein D B479_23390 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor D B479_22945 hypothetical protein K07574 yhbY; RNA-binding protein D B479_05020 hypothetical protein K09889 yjgA; ribosome-associated protein D B479_08095 ribosome modulation factor K03812 rmf; ribosome modulation factor D B479_05060 RpoX K05808 hpf; ribosome hibernation promoting factor D B479_04100 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D B479_07460 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ppuh03016] D B479_17115 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D B479_02450 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D B479_03135 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D B479_07570 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D B479_20365 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D B479_03540 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D B479_23415 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D B479_20840 metG; methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D B479_14955 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D B479_24915 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D B479_05790 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D B479_20325 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D B479_18975 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D B479_10035 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D B479_16965 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D B479_14950 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D B479_05180 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D B479_04765 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D B479_10055 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D B479_10060 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D B479_02660 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D B479_22040 tryptophanyl-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D B479_24595 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D B479_02620 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D B479_24985 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D B479_20435 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D B479_07645 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D B479_22890 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D B479_06145 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D B479_04705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_16325 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_00680 SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D B479_23940 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D B479_00225 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D B479_00220 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D B479_04600 selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D B479_01740 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D B479_00240 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D B479_20900 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D B479_26205 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D B479_19640 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D B479_16390 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D B479_03805 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D B479_00635 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D B479_00630 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D B479_22805 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D B479_20945 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D B479_01380 YbaK/prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D B479_05465 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D B479_08465 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D B479_23545 NifR3 family TIM-barrel protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D B479_07590 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D B479_21090 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D B479_21095 tRNA mo(5)U34 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D B479_03400 type 12 methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D B479_22550 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D B479_05645 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D B479_04690 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D B479_14815 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D B479_24735 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D B479_06655 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D B479_08170 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D B479_17035 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D B479_06250 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D B479_08200 sulfur transfer protein SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D B479_20225 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D B479_16940 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D B479_16935 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D B479_16930 sulfur transfer complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D B479_16945 hypothetical protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D B479_04715 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D B479_21185 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ D B479_08885 tRNA-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D B479_06755 mnmC; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D B479_04655 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D B479_20260 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D B479_09520 queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D B479_20265 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D B479_08420 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D B479_23965 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D B479_04595 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D B479_04660 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D B479_24705 tRNA s(4)U8 sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D B479_06095 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D B479_05845 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D B479_02430 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D B479_23955 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D B479_05960 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D B479_23845 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D B479_22880 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D B479_27069 VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:ppuh03012] D B479_03340 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D B479_22900 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D B479_10040 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D B479_01355 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D B479_06015 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D B479_02685 elongation factor Tu K02358 tuf; elongation factor Tu D B479_02745 elongation factor Tu K02358 tuf; elongation factor Tu D B479_17475 elongation factor G K02355 fusA; elongation factor G D B479_02740 elongation factor G K02355 fusA; elongation factor G D B479_02960 selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor D B479_04160 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D B479_06025 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D B479_04165 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D B479_04105 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D B479_17000 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D B479_07230 elongation factor P K02356 efp; elongation factor P D B479_05785 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D B479_04860 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D B479_23430 hypothetical protein K09890 arfA; alternative ribosome-rescue factor D B479_12965 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:ppuh03110] D B479_17005 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D B479_03610 ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D B479_09325 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D B479_24470 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D B479_17815 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D B479_22980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D B479_04725 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D B479_23700 molecular chaperone-like protein K04046 yegD; hypothetical chaperone protein D B479_21790 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D B479_22975 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D B479_23695 chaperone DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D B479_02515 heat shock protein DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein D B479_04720 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D B479_01695 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33 D B479_22990 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D B479_12010 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D B479_07595 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA D B479_01685 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D B479_21795 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D B479_21150 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D B479_22935 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D B479_00195 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D B479_09615 type 1 pili usher pathway chaperone CsuC K07346 fimC; fimbrial chaperone protein D B479_24740 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D B479_19135 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D B479_23635 hypothetical protein K09796 pccA; periplasmic copper chaperone A D B479_09735 hypothetical protein K09796 pccA; periplasmic copper chaperone A D B479_19305 PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D B479_14960 cyclophilin type peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D B479_09340 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D B479_01340 FKBP-type peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D B479_06570 FKBP-type peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D B479_03855 FKBP-type peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D B479_03550 FKBP-type peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D B479_04370 FKBP-type peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D B479_12705 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D B479_12755 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D B479_02495 SurA domain-containing protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D B479_25620 thioredoxin K03671 TXN; thioredoxin D B479_24815 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D B479_03040 thioredoxin K05838 ybbN; putative thioredoxin D B479_11650 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D B479_24745 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D B479_20925 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D B479_00965 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D B479_01330 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D B479_04525 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D B479_05665 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D B479_18050 protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D B479_03315 dipZ; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D B479_18465 periplasmic protein thiol-disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D B479_18060 dsbG; disulfide isomerase/thiol-disulfide oxidase K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:ppuh04131] D B479_04740 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D B479_04295 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D B479_05325 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_08370 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_21590 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_18370 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_17815 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:ppuh04121] C 03051 Proteasome [BR:ppuh03051] D B479_17815 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ppuh03032] D B479_17625 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D B479_10615 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_08490 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_10125 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_03675 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_26300 histone family protein DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D B479_09335 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D B479_05170 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D B479_10065 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D B479_06870 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D B479_00250 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D B479_23815 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_08585 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_20095 Putative DnaB-like replicative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_10265 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D B479_20100 hypothetical protein K02315 dnaC; DNA replication protein DnaC D B479_02420 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D B479_02910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D B479_06085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D B479_00255 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D B479_05190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D B479_23425 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D B479_07510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D B479_17620 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_02245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_23285 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_18200 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D B479_06080 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D B479_00945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D B479_18235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_24300 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_06365 DNA replication initiation factor K10763 hda; DnaA-homolog protein D B479_06830 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D B479_00265 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D B479_24025 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D B479_24040 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D B479_16495 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D B479_08315 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D B479_17060 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ppuh03036] D B479_10615 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_08490 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_10125 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_03675 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_21130 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D B479_26300 histone family protein DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D B479_09335 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D B479_05170 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D B479_10065 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D B479_06870 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D B479_23695 chaperone DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D B479_23690 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D B479_00250 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D B479_20340 ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D B479_23550 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D B479_23935 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D B479_21685 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D B479_23280 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_26100 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_18405 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_23330 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_18905 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_09250 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_22060 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B479_05165 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein D B479_18245 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D B479_19105 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D B479_19100 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D B479_21890 cell division protein FtsA K03590 ftsA; cell division protein FtsA D B479_06115 septum formation initiator K05589 ftsB; cell division protein FtsB D B479_25020 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D B479_21940 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D B479_16985 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D B479_21945 cell division protein FtsL K03586 ftsL; cell division protein FtsL D B479_21895 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D B479_21915 cell division protein FtsW K03588 ftsW; cell division protein FtsW D B479_25015 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D B479_21885 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D B479_18240 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D B479_25550 hypothetical protein K09888 zapA; cell division protein ZapA D B479_02045 hypothetical protein K09888 zapA; cell division protein ZapA D B479_25545 hypothetical protein K09892 zapB; cell division protein ZapB D B479_02040 hypothetical protein K09892 zapB; cell division protein ZapB D B479_08940 AFG1 family ATPase K06916 zapE; cell division protein ZapE D B479_22035 AFG1 family ATPase K06916 zapE; cell division protein ZapE D B479_09565 AFG1 family ATPase K06916 zapE; cell division protein ZapE D B479_23950 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D B479_21455 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_14525 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21750 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_25830 toluene efflux pump periplasmic linker protein TtgG K03585 acrA; membrane fusion protein, multidrug efflux system D B479_06670 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D B479_06665 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D B479_06660 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D B479_08325 cell division inhibitor K13053 sulA; cell division inhibitor SulA D B479_04980 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D B479_04985 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D B479_04990 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D B479_23475 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D B479_09885 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D B479_18570 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D B479_00210 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D B479_24820 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D B479_13940 Putative ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D B479_00205 ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D B479_24025 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D B479_24040 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D B479_00220 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D B479_00215 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D B479_25695 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D B479_12135 integrase family protein K03733 xerC; integrase/recombinase XerC D B479_05660 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D B479_20835 ATP-binding Mrp/Nbp35 family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D B479_03995 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D B479_00950 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ppuh03400] D B479_12665 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D B479_04190 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D B479_21230 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D B479_23505 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D B479_01865 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D B479_20865 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D B479_12125 DEAD/DEAH box helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D B479_21855 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D B479_12910 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D B479_13190 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D B479_15680 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D B479_26175 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D B479_03965 methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D B479_11410 deoxyribodipyrimidine photolyase-like protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D B479_14250 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D B479_03960 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D B479_14270 alcohol dehydrogenase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D B479_00640 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D B479_25095 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D B479_11590 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D B479_15020 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D B479_26195 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D B479_05705 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D B479_18235 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_24300 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D B479_00945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D B479_02900 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D B479_14160 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D B479_07555 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D B479_17410 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D B479_26495 uvrD; DNA-dependent helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D B479_13735 putative ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D B479_02720 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D B479_02725 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D B479_02880 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D B479_26240 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D B479_08365 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D B479_06175 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D B479_23945 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D B479_21575 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D B479_05415 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D B479_03125 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D B479_08510 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D B479_06085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D B479_00255 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D B479_05190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D B479_23425 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D B479_07510 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D B479_17620 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_02245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_23285 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D B479_18200 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D B479_02910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D B479_10620 DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D B479_22700 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D B479_22705 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D B479_22695 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D B479_06190 recA; recombinase A K03553 recA; recombination protein RecA D B479_20310 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D B479_20305 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D B479_20315 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D B479_24910 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D B479_07790 SMC domain-containing protein K03546 sbcC; DNA repair protein SbcC/Rad50 D B479_07795 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D B479_22500 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D B479_00260 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D B479_26285 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D B479_21120 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D B479_18190 recR; recombination protein RecR K06187 recR; recombination protein RecR D B479_22995 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D B479_06535 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC D B479_00110 hypothetical protein K19789 radD; DNA repair protein RadD D B479_21540 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D B479_13265 Ku family containing protein K10979 ku; DNA end-binding protein Ku D B479_13240 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D B479_06830 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D B479_00265 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D B479_16495 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D B479_08315 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D B479_26300 histone family protein DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D B479_09335 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D B479_05170 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D B479_23550 fis; global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D B479_10065 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D B479_06870 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D B479_19195 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D B479_23100 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D B479_20375 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D B479_13720 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D B479_08330 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D B479_09785 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D B479_13715 hypothetical protein K14160 imuA; protein ImuA D B479_13710 hypothetical protein K14161 imuB; protein ImuB D B479_13705 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D B479_06195 recX; recombination regulator RecX K03565 recX; regulatory protein D B479_26065 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D B479_20725 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D B479_20810 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D B479_21025 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D B479_20480 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D B479_20485 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ppuh03029] D B479_22005 cytochrome b/b6 domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D B479_22900 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D B479_10040 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D B479_06015 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D B479_02685 elongation factor Tu K02358 tuf; elongation factor Tu D B479_02745 elongation factor Tu K02358 tuf; elongation factor Tu D B479_17475 elongation factor G K02355 fusA; elongation factor G D B479_02740 elongation factor G K02355 fusA; elongation factor G D B479_21125 era; GTPase Era K03595 era; GTPase D B479_02660 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D B479_23415 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D B479_20325 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D B479_24915 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D B479_04970 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D B479_04965 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D B479_04975 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D B479_02910 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D B479_06050 surface antigen family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D B479_22980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D B479_22990 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D B479_21790 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D B479_21795 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D B479_22975 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D B479_04705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_16325 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_04720 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D B479_20925 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D B479_20835 ATP-binding Mrp/Nbp35 family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D B479_00880 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_04550 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D B479_00850 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D B479_00875 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D B479_00230 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D B479_00865 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D B479_00885 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D B479_09730 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D B479_14730 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D B479_17815 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ppuh02000] D B479_24120 lipid A ABC exporter, fused ATPase, and inner membrane MsbA subunits K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D B479_19310 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D B479_11230 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D B479_08215 lipid ABC transporter ATPase/inner membrane protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D B479_14585 efflux ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D B479_01175 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D B479_10955 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D B479_06795 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D B479_17960 macrolide transporter ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D B479_19515 cyclic peptide transporter K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D B479_09160 ABC transporter K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D B479_08285 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D B479_18390 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D B479_25380 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D B479_25375 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D B479_25370 sulfate ABC transporter permease K02047 cysW; sulfate/thiosulfate transport system permease protein D B479_25365 sulfate ABC transporter ATPase K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D B479_16480 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D B479_13045 extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein D B479_16485 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D B479_16490 molybdate ABC transporter ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D B479_01600 taurine ABC transporter periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein D B479_01595 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D B479_01470 NMT1/THI5-like domain-containing protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_15030 aliphatic sulfonates ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01620 aliphatic sulfonates ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01195 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_13000 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01435 putative nitrate ABC transporter periplasmic nitrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D B479_01465 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01630 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01205 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_12995 binding-protein-dependent transport system inner membrane protein K15554 ssuC; sulfonate transport system permease protein D B479_01440 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D B479_01460 ABC transporter-like protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01635 ssuB; aliphatic sulfonates transport ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01200 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_01445 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_12990 taurine-transporting AtPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D B479_23850 iron ABC transporter periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D B479_25515 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D B479_25160 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D B479_23855 binding-protein-dependent transport system inner membrane protein K02011 afuB; iron(III) transport system permease protein D B479_25510 binding-protein-dependent transport system inner membrane protein K02011 afuB; iron(III) transport system permease protein D B479_25165 2-aminoethylphosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein D B479_20940 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D B479_25170 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D B479_04865 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_08920 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_26440 putative ABC transporter periplasmic polyamine-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_13550 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_15810 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_25430 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_25435 putrescine ABC transporter periplasmic putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein D B479_25415 ornithine carbamoyltransferase K11074 potI; putrescine transport system permease protein D B479_25420 binding-protein-dependent transport system inner membrane protein K11075 potH; putrescine transport system permease protein D B479_25425 spermidine/putrescine ABC transporter ATPase K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D B479_11190 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_12275 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_05735 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_02540 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_06630 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_16285 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D B479_05720 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_02550 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_06615 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_11210 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_16295 binding-protein-dependent transport system inner membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D B479_05725 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_02545 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_06620 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_11215 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_16290 binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D B479_02535 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_05730 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_06610 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_11220 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_16300 Polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D B479_00710 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_00075 ABC transporter substrate binding protein (glycine-betaine) K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_01915 glycine betaine/L-proline ABC transporter periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_06705 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_01950 choline ABC transporter periplasmic binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_15185 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_11920 putative histidine transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D B479_00085 protein ProW K02001 proW; glycine betaine/proline transport system permease protein D B479_00090 protein ProW K02001 proW; glycine betaine/proline transport system permease protein D B479_01910 choline ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D B479_15190 binding-protein-dependent transport system inner membrane protein K02001 proW; glycine betaine/proline transport system permease protein D B479_11925 glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D B479_01905 choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D B479_00080 glycine betaine/L-proline ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D B479_11930 glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D B479_04850 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D B479_04845 binding-protein-dependent transport system inner membrane protein K05846 opuBD; osmoprotectant transport system permease protein D B479_04855 binding-protein-dependent transport system inner membrane protein K05846 opuBD; osmoprotectant transport system permease protein D B479_04840 glycine betaine/L-proline ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D B479_15550 putative sulfonate ABC transporter periplasmic sulfonate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D B479_15545 binding-protein-dependent transport system inner membrane protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D B479_15555 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D B479_05370 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D B479_05355 extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D B479_05360 binding-protein-dependent transport system inner membrane protein K17316 gtsB; glucose/mannose transport system permease protein D B479_05365 binding-protein-dependent transport system inner membrane protein K17317 gtsC; glucose/mannose transport system permease protein D B479_09980 monosaccharide-transporting ATPase K10439 rbsB; ribose transport system substrate-binding protein D B479_09990 monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein D B479_09985 ribose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D B479_09290 extracellular solute-binding protein K17321 glpV; glycerol transport system substrate-binding protein D B479_09275 binding-protein-dependent transport system inner membrane protein K17322 glpP; glycerol transport system permease protein D B479_09280 binding-protein-dependent transport system inner membrane protein K17323 glpQ; glycerol transport system permease protein D B479_09265 sugar ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D B479_09270 sugar ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D B479_01035 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D B479_05105 toluene tolerance protein Ttg2C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D B479_01045 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D B479_05100 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D B479_01040 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D B479_05095 toluene tolerance ABC efflux transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D B479_01030 ABC transporter auxiliary component-like protein K18480 linN; cholesterol transport system auxiliary component D B479_05110 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D B479_05115 toluene tolerance protein Ttg2E K07122 mlaB; phospholipid transport system transporter-binding protein D B479_26375 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D B479_11345 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D B479_16305 OmpA/MotB domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D B479_26370 binding-protein-dependent transport system inner membrane protein K02037 pstC; phosphate transport system permease protein D B479_11350 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D B479_26365 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D B479_11355 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D B479_26360 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D B479_11360 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D B479_04605 phosphonate ABC transporter periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D B479_04615 binding-protein-dependent transport system inner membrane protein K02042 phnE; phosphonate transport system permease protein D B479_04620 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D B479_04610 phosphonates import ATP-binding protein phnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D B479_20975 extracellular solute-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D B479_20985 polar amino acid ABC transporter inner membrane subunit K10002 gltK; glutamate/aspartate transport system permease protein D B479_20980 glutamate/aspartate ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D B479_20990 glutamate-aspartate ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D B479_22110 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D B479_22105 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D B479_22100 polar amino acid ABC transporter inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein D B479_22095 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_01565 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D B479_25270 periplasmic binding protein from ABC-type transporter K02424 tcyA; L-cystine transport system substrate-binding protein D B479_01560 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D B479_01555 amino-acid ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D B479_19040 cationic amino acid ABC transporter periplasmic binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D B479_19030 polar amino acid ABC transporter inner membrane subunit K10023 aotM; arginine/ornithine transport system permease protein D B479_19035 polar amino acid ABC transporter inner membrane subunit K10024 aotQ; arginine/ornithine transport system permease protein D B479_19025 arginine/ornithine transport ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D B479_23785 extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D B479_20655 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D B479_23780 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D B479_20660 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D B479_23775 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D B479_20665 livM; leucine/isoleucine/valine transporter permease subunit K01998 livM; branched-chain amino acid transport system permease protein D B479_20670 livG; leucine/isoleucine/valine transporter ATP-binding subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D B479_23770 Branched chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D B479_23765 Branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D B479_20675 branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D B479_00890 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D B479_01535 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D B479_25335 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D B479_00895 binding-protein-dependent transport system inner membrane protein K02072 metI; D-methionine transport system permease protein D B479_01525 binding-protein-dependent transport system inner membrane protein K02072 metI; D-methionine transport system permease protein D B479_00900 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D B479_01530 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D B479_23660 urea ABC transporter urea binding protein K11959 urtA; urea transport system substrate-binding protein D B479_23665 urea ABC transporter permease UrtB K11960 urtB; urea transport system permease protein D B479_23670 urea ABC transporter permease UrtC K11961 urtC; urea transport system permease protein D B479_23675 branched-chain amino acid ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D B479_23680 urea ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D B479_01830 amino acid ABC transporter periplasmic amino acid-binding protein K23055 K23055; putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein D B479_01825 polar amino acid ABC transporter inner membrane subunit K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D B479_01820 polar amino acid ABC transporter inner membrane subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein D B479_01835 amino acid ABC transporter ATP-binding protein K23058 K23058; putative lysine/arginine/ornithine/histidine/octopine transport system ATP-binding protein [EC:7.4.2.1] D B479_03735 amino acid ABC transporter periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_04020 amino acid ABC transporter periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_15350 amino acid ABC transporter periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_17325 amino acid ABC transporter periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_24235 amino acid ABC transporter periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_25315 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_24360 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_15865 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_03095 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_24580 amino acid ABC transporter periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_15475 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_18205 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_11530 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_17920 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D B479_24575 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_03730 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_15360 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_17315 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_17320 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_04010 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_04015 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_25325 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_25330 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_15355 polar amino acid ABC transporter inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D B479_24570 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_15370 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_25320 ABC transporter-like protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_04005 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_17310 ABC transporter-like protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D B479_04905 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04915 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04920 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_26160 extracellular solute-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D B479_04900 alkaline phosphatase K12369 dppB; dipeptide transport system permease protein D B479_04895 binding-protein-dependent transport system inner membrane protein K12370 dppC; dipeptide transport system permease protein D B479_04890 oligopeptide/dipeptide ABC transporter ATPase K12371 dppD; dipeptide transport system ATP-binding protein D B479_04885 dppF; dipeptide transporter ATP-binding subunit K12372 dppF; dipeptide transport system ATP-binding protein D B479_17645 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D B479_17650 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D B479_12750 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D B479_17655 binding-protein-dependent transport system inner membrane protein K13894 yejB; microcin C transport system permease protein D B479_12745 binding-protein-dependent transport system inner membrane protein K13894 yejB; microcin C transport system permease protein D B479_17660 binding-protein-dependent transport system inner membrane protein K13895 yejE; microcin C transport system permease protein D B479_12740 binding-protein-dependent transport system inner membrane protein K13895 yejE; microcin C transport system permease protein D B479_17665 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D B479_22780 periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein D B479_22775 transport system permease K25133 hmuU; heme transport system permease protein D B479_22770 hmuV; hemin importer ATP-binding subunit K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D B479_09915 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D B479_09910 transport system permease K02015 ABC.FEV.P; iron complex transport system permease protein D B479_09905 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D B479_03110 periplasmic binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D B479_00930 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D B479_16185 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D B479_00915 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D B479_16195 putative ABC transport protein K09816 znuB; zinc transport system permease protein D B479_00920 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D B479_16190 cation ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D B479_05205 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D B479_05210 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein D B479_05070 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D B479_08395 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D B479_08405 LolC/E family lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein D B479_08400 lolD; lipoprotein transporter ATP-binding subunit K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D B479_18480 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D B479_18485 heme exporter protein CcmC K02195 ccmC; heme exporter protein C D B479_18490 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D B479_18495 cytochrome c biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D B479_25015 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D B479_25020 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D B479_18065 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D B479_07385 inner membrane transport permease K01992 ABC-2.P; ABC-2 type transport system permease protein D B479_11485 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D B479_25580 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D B479_18070 ABC transporter-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D B479_07380 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D B479_11490 efflux ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D B479_09400 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D B479_15890 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D B479_03020 efflux ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D B479_03170 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D B479_03175 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D B479_09405 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D B479_15895 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D B479_03025 efflux ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D B479_03180 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D B479_12315 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D B479_26055 multidrug efflux protein NorA K26939 norM; MATE family, multidrug efflux pump D B479_03355 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D B479_21380 major facilitator superfamily metabolite/H(+) symporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D B479_21500 major facilitator superfamily metabolite/H(+) symporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT D B479_09870 major facilitator superfamily transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D B479_14905 proline/glycine betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D B479_26380 major facilitator superfamily transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D B479_15385 D-galactonate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D B479_11160 major facilitator superfamily transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D B479_12970 major facilitator superfamily MFS_1 K13021 ttuB; MFS transporter, ACS family, tartrate transporter D B479_07900 major facilitator superfamily transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D B479_21520 benzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D B479_25860 3-hydroxyphenylpropionic transporter MhpT K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter D B479_13455 major facilitator superfamily transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D B479_16010 major facilitator superfamily transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D B479_05150 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D B479_07110 major facilitator superfamily transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D B479_11700 major facilitator superfamily transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D B479_08075 nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D B479_21820 AmpG-related permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D B479_26979 hypothetical protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D B479_26854 tetracycline efflux protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D B479_03455 Bcr/CflA family multidrug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D B479_17280 major facilitator superfamily transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D B479_16360 arabinose transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D B479_21825 multidrug efflux system translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D B479_10790 major facilitator superfamily transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D B479_12785 major facilitator superfamily transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D B479_10820 major facilitator superfamily transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D B479_07560 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D B479_15135 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D B479_22235 major facilitator superfamily transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D B479_03950 major facilitator superfamily transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D B479_09640 major facilitator superfamily transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D B479_24830 major facilitator superfamily transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D B479_11890 major facilitator transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein D B479_00055 major facilitator superfamily transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D B479_25210 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D B479_05045 phosphotransferase system, phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D B479_04440 mulitfunctional PTS system fructose-like transporter subunit IIA/phosphocarrier protein HPr/phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D B479_04450 PTS system fructose-specific transporter subunits IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D B479_05055 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D B479_18275 aquaporin Z K06188 aqpZ; aquaporin Z D B479_20950 MIP family channel protein K02440 glpF; glycerol uptake facilitator D B479_18385 ion transport protein K10716 kch; voltage-gated potassium channel D B479_08150 Rh family protein/ammonium transporter K03320 amt; ammonium transporter, Amt family D B479_25710 ammonium transporter K03320 amt; ammonium transporter, Amt family D B479_15650 ammonium transporter K03320 amt; ammonium transporter, Amt family D B479_01295 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_07065 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_15960 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_10795 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_20525 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_21860 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_07375 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_07785 glutathione S-transferase domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D B479_21995 glutathione S-transferase domain-containing protein K03599 sspA; stringent starvation protein A D B479_07835 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D B479_07840 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D B479_16920 hypothetical protein K19416 yccA; modulator of FtsH protease D B479_22505 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D B479_24805 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel D B479_03970 mechanosensitive ion channel protein MscS K05802 mscK; potassium-dependent mechanosensitive channel D B479_21830 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D B479_06640 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D B479_19270 mechanosensitive ion channel protein MscS K16053 ybdG; miniconductance mechanosensitive channel D B479_18960 magnesium transporter K06213 mgtE; magnesium transporter D B479_18375 Urea transporter K08717 utp; urea transporter D B479_18580 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D B479_23990 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D B479_18575 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D B479_23985 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D B479_20890 OmpA/MotB domain-containing protein K21218 motY; sodium-type flagellar protein MotY D B479_07400 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D B479_26265 TonB-system energizer ExbB type-1 K03561 exbB; biopolymer transport protein ExbB D B479_25355 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D B479_26270 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D B479_07405 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D B479_25350 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D B479_20295 TolQ K03562 tolQ; biopolymer transport protein TolQ D B479_20290 TolR K03560 tolR; biopolymer transport protein TolR D B479_07175 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D B479_08040 Mg2 transporter protein CorA family protein K16074 zntB; zinc transporter D B479_04000 Mg2 transporter protein CorA family protein K16074 zntB; zinc transporter D B479_16970 camphor resistance protein CrcB K06199 crcB; fluoride exporter D B479_19680 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D B479_04625 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D B479_27199 mercuric transport protein K08363 merT; mercuric ion transport protein D B479_00015 mercuric transport protein K08363 merT; mercuric ion transport protein D B479_27204 mercuric transport protein periplasmic component MerP K08364 merP; periplasmic mercuric ion binding protein D B479_00010 MerP K08364 merP; periplasmic mercuric ion binding protein D B479_27219 mercury resistance protein K19059 merE; mercuric ion transport protein D B479_26610 mercury resistance protein K19059 merE; mercuric ion transport protein D B479_26340 metal ion transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D B479_05620 transporter-associated protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D B479_00505 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP D B479_08060 OmpF family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D B479_06485 aromatic hydrocarbon degradation membrane protein K06076 fadL; long-chain fatty acid transport protein D B479_09620 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D B479_02570 outer membrane autotransporter K12686 apeE; outer membrane lipase/esterase D B479_22170 outer membrane protein AlgE K16081 algE; alginate production protein D B479_09170 outer membrane receptor FepA K19611 fepA; ferric enterobactin receptor D B479_04805 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D B479_15435 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D B479_04835 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D B479_01795 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D B479_19460 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D B479_05310 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D B479_08910 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_17600 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_01140 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_22295 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_01770 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_09875 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_09925 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_02230 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_01485 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_13505 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_17775 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_07190 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_15270 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_23645 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_11795 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_21065 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D B479_10945 TolC family type I secretion outer membrane protein K12538 hasF; outer membrane protein, type I secretion system D B479_09855 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D B479_00540 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D B479_00340 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_19210 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D B479_12550 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system D B479_13780 outer membrane protein OprJ K08721 oprJ; outer membrane protein, multidrug efflux system D B479_14395 RND efflux system outer membrane lipoprotein K18300 oprN; outer membrane protein, multidrug efflux system D B479_25820 toluene efflux pump outer membrane protein TtgI K18139 oprM; outer membrane protein, multidrug efflux system D B479_21465 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_17965 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_13665 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D B479_05375 carbohydrate-selective porin OprB K07267 oprB; porin D B479_15245 carbohydrate-selective porin OprB K07267 oprB; porin D B479_21070 carbohydrate-selective porin OprB K07267 oprB; porin D B479_09900 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_20360 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_25995 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_06050 surface antigen family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D B479_04775 outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB D B479_20200 lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D B479_03595 putative competence lipoprotein ComL K05807 bamD; outer membrane protein assembly factor BamD D B479_23005 SmpA/OmlA domain-containing protein K06186 bamE; outer membrane protein assembly factor BamE D B479_15010 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D B479_15005 hypothetical protein K09800 tamB; translocation and assembly module TamB D B479_05075 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D B479_05080 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D B479_02500 organic solvent tolerance protein K04744 lptD; LPS-assembly protein D B479_23420 rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D B479_23395 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D B479_22390 LrgA family protein K06518 cidA; holin-like protein D B479_23525 LrgA family protein K06518 cidA; holin-like protein D B479_04945 amino acid permease-associated protein K11734 aroP; aromatic amino acid transport protein AroP D B479_19090 amino acid ABC transporter permease K11734 aroP; aromatic amino acid transport protein AroP D B479_01840 GABA permease K11735 gabP; GABA permease D B479_00100 GABA permease K11735 gabP; GABA permease D B479_11660 gamma-aminobutyrate permease K11735 gabP; GABA permease D B479_17450 amino acid permease-associated protein K11735 gabP; GABA permease D B479_14920 GABA permease K11735 gabP; GABA permease D B479_23215 amino acid permease-associated protein K11735 gabP; GABA permease D B479_10875 amino acid permease-associated protein K11735 gabP; GABA permease D B479_23655 D-alanine/D-serine/glycine permease K11737 cycA; D-serine/D-alanine/glycine transporter D B479_24620 amino acid ABC transporter permease K16234 hutT; histidine transporter D B479_03750 amino acid transporter K16235 mmuP; S-methylmethionine transporter D B479_15855 amino acid permease-associated protein K02205 rocE; arginine/ornithine permease D B479_20245 amino acid ABC transporter permease K14052 puuP; putrescine importer D B479_02125 amino acid permease-associated protein K14052 puuP; putrescine importer D B479_11110 amino acid permease-associated protein K14052 puuP; putrescine importer D B479_12800 amino acid permease family protein K14052 puuP; putrescine importer D B479_13865 amino acid permease K14052 puuP; putrescine importer D B479_05290 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D B479_05295 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D B479_03225 ethanolamine transporter K16238 eat; ethanolamine permease D B479_00450 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D B479_23320 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D B479_07135 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D B479_09865 CzcA family heavy metal efflux protein K15726 czcA; heavy metal efflux system protein D B479_00530 CzcA family heavy metal efflux protein K15726 czcA; heavy metal efflux system protein D B479_00350 CzcA family heavy metal efflux protein K07787 cusA; copper/silver efflux system protein D B479_13785 multidrug efflux RND transporter MexD K18296 mexD; multidrug efflux pump D B479_14390 hydrophobe/amphiphile efflux-1 (HAE1) family protein K18299 mexF; multidrug efflux pump D B479_07985 acriflavin resistance protein K18307 mexI; multidrug efflux pump D B479_05905 acriflavin resistance protein K18303 mexK; multidrug efflux pump D B479_04490 acriflavin resistance protein K21133 mexN; multidrug efflux pump D B479_21460 hydrophobe/amphiphile efflux-1 (HAE1) family protein K18138 acrB; multidrug efflux pump D B479_25825 toluene efflux pump membrane transporter TtgH K18138 acrB; multidrug efflux pump D B479_21755 multidrug efflux protein K18138 acrB; multidrug efflux pump D B479_14530 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D B479_25390 acriflavin resistance protein K21134 triC; multidrug efflux pump D B479_15315 acriflavin resistance protein K07788 mdtB; multidrug efflux pump D B479_15310 acriflavin resistance protein K07789 mdtC; multidrug efflux pump D B479_24095 Small multidrug resistance protein K03297 emrE; small multidrug resistance pump D B479_27259 quaternary ammonium compound-resistance protein QacE K03297 emrE; small multidrug resistance pump D B479_26974 multidrug efflux protein K18975 ebr; small multidrug resistance pump D B479_06525 multidrug efflux pump K11741 sugE; quaternary ammonium compound-resistance protein SugE D B479_12285 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter D B479_26859 hypothetical protein K15269 pecM; probable blue pigment (indigoidine) exporter D B479_09155 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D B479_14435 transporter DMT superfamily protein K05786 rarD; chloramphenicol-sensitive protein RarD D B479_02270 transporter DMT superfamily protein K05786 rarD; chloramphenicol-sensitive protein RarD D B479_15420 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D B479_15175 Na+/H+ antiporter NhaC K07084 yuiF; putative amino acid transporter D B479_14345 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D B479_23025 L-lactate transport K03303 lutP; lactate permease D B479_01575 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein D B479_24780 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein D B479_04955 CaCA family Na+/Ca+ antiporter K07301 yrbG; cation:H+ antiporter D B479_21535 phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D B479_24175 sodium/proline symporter K11928 putP; sodium/proline symporter D B479_13160 acetate permease K14393 actP; cation/acetate symporter D B479_13890 acetate permease K14393 actP; cation/acetate symporter D B479_06715 actP; acetate permease K14393 actP; cation/acetate symporter D B479_01020 gltP; glutamate/aspartate:proton symporter K11102 gltP; proton glutamate symport protein D B479_12555 sodium:dicarboxylate symporter K11102 gltP; proton glutamate symport protein D B479_13070 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_09235 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_20440 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_11750 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D B479_16415 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D B479_05260 sodium/glutamate symport carrier protein GltS K03312 gltS; glutamate:Na+ symporter, ESS family D B479_19765 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D B479_20690 nhaA; pH-dependent sodium/proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D B479_17095 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family D B479_05990 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D B479_24800 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D B479_24335 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter D B479_25975 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D B479_04070 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D B479_26510 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter D B479_19760 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D B479_19150 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D B479_00655 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D B479_15575 cytosine/purines uracil thiamine allantoin permease K23467 tgnP; trigonelline permease D B479_04220 uracil-xanthine permease K02824 uraA; uracil permease D B479_22495 uracil-xanthine permease K24206 uacT; uric acid transporter D B479_18320 xanthine/uracil permease family protein K24206 uacT; uric acid transporter D B479_16925 xanthine permease K16345 xanP; xanthine permease XanP D B479_18285 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D B479_22545 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D B479_15330 aromatic amino acid permease K03837 sdaC; serine transporter D B479_07060 benzoate transporter K05782 benE; benzoate membrane transport protein D B479_13445 benzoate transporter K05782 benE; benzoate membrane transport protein D B479_07870 benzoate transporter K05782 benE; benzoate membrane transport protein D B479_10935 chromate transporter K07240 chrA; chromate transporter D B479_00705 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D B479_17480 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D B479_26600 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D B479_27229 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D B479_11575 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D B479_01060 sodium-dependent inorganic phosphate (Pi) transporter K03324 yjbB; phosphate:Na+ symporter D B479_03700 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D B479_11715 arsenical-resistance protein K03325 ACR3; arsenite transporter D B479_03785 bile acid:sodium symporter family protein K03325 ACR3; arsenite transporter D B479_09100 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D B479_09095 monovalent cation/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D B479_09090 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D B479_09085 monovalent cation/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D B479_09080 monovalent cation/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D B479_09075 monovalent cation/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D B479_03530 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D B479_15200 auxin efflux carrier K13936 mdcF; malonate transporter and related proteins D B479_14180 auxin efflux carrier K24180 mleP; malate permease and related proteins D B479_04940 auxin efflux carrier K24180 mleP; malate permease and related proteins D B479_11320 Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein D B479_20390 potassium transporter K03549 kup; KUP system potassium uptake protein D B479_21690 lysine exporter protein LysE/YggA K06895 lysE; L-lysine exporter family protein LysE/ArgO D B479_01365 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein D B479_15220 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein D B479_15480 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein D B479_12700 lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein D B479_12690 lysine exporter protein LysE/YggA K05835 rhtC; threonine efflux protein D B479_03940 lysine exporter protein LysE/YggA K05835 rhtC; threonine efflux protein D B479_09755 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D B479_18940 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D B479_09750 branched chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump D B479_18945 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D B479_21220 putative tricarboxylate transport protein TctA K07793 tctA; putative tricarboxylic transport membrane protein D B479_21215 putative tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein D B479_21210 tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein D B479_20220 hypothetical protein K03548 perM; putative permease D B479_23570 multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein D B479_21915 cell division protein FtsW K03588 ftsW; cell division protein FtsW D B479_04295 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D B479_01280 cytochrome c family protein K07243 FTR; high-affinity iron transporter D B479_22485 carbon starvation protein CstA K23676 btsT; pyruvate/proton symporter D B479_24435 TonB family protein K03832 tonB; periplasmic protein TonB D B479_26275 TonB family protein K03832 tonB; periplasmic protein TonB D B479_25360 TonB family protein K03832 tonB; periplasmic protein TonB D B479_20275 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D B479_20285 TolA protein K03646 tolA; colicin import membrane protein D B479_20280 tolB; translocation protein TolB K03641 tolB; TolB protein D B479_14790 malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D B479_14780 malonate decarboxylase subunit delta K13931 mdcC; malonate decarboxylase delta subunit D B479_22230 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D B479_07565 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D B479_15140 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D B479_10950 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system D B479_09860 RND family efflux transporter, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D B479_00535 RND family efflux transporter MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D B479_00345 RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D B479_01170 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system D B479_13790 multidrug efflux RND membrane fusion protein MexC K18295 mexC; membrane fusion protein, multidrug efflux system D B479_14385 RND family efflux transporter, MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system D B479_07980 RND family efflux transporter MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system D B479_05900 RND family efflux transporter, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D B479_04495 RND family efflux transporter, MFP subunit K21135 mexM; membrane fusion protein, multidrug efflux system D B479_21455 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_14525 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21750 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_25830 toluene efflux pump periplasmic linker protein TtgG K03585 acrA; membrane fusion protein, multidrug efflux system D B479_25400 RND family efflux transporter, MFP subunit K21136 triA; membrane fusion protein, multidrug efflux system D B479_25395 RND family efflux transporter, MFP subunit K21137 triB; membrane fusion protein, multidrug efflux system D B479_15320 RND family efflux transporter, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D B479_17955 RND family efflux transporter, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D B479_13650 non-specific protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D B479_13655 lipopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator D B479_12225 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D B479_18470 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D B479_15085 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D B479_18295 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:ppuh02044] D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_10955 type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D B479_10950 HlyD family type I secretion membrane fusion protein K12537 hasE; membrane fusion protein, type I secretion system D B479_10945 TolC family type I secretion outer membrane protein K12538 hasF; outer membrane protein, type I secretion system D B479_01175 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D B479_01170 HlyD family type I secretion membrane fusion protein K12542 lapC; membrane fusion protein, adhesin transport system D B479_19210 TolC family type I secretion outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D B479_12550 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system D B479_05515 type II secretion protein C K02452 gspC; general secretion pathway protein C D B479_05520 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D B479_14680 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D B479_05525 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D B479_25485 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D B479_14705 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D B479_05530 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D B479_14380 type II secretion system protein K02455 gspF; general secretion pathway protein F D B479_05535 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D B479_14375 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D B479_14670 type II secretion system protein G K02456 gspG; general secretion pathway protein G D B479_14675 secretion type II protein K02456 gspG; general secretion pathway protein G D B479_05540 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D B479_05545 type II secretion system protein I/J K02458 gspI; general secretion pathway protein I D B479_05550 type II secretion system protein J K02459 gspJ; general secretion pathway protein J D B479_05500 general secretion pathway protein K K02460 gspK; general secretion pathway protein K D B479_05555 general secretion pathway protein L K02461 gspL; general secretion pathway protein L D B479_05565 type II secretion pathway protein GspN K02463 gspN; general secretion pathway protein N D B479_03650 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D B479_03660 fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA D B479_03655 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D B479_03580 type IV pili biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE D B479_04750 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D B479_24425 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG D B479_24420 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH D B479_24415 CheW protein K02659 pilI; twitching motility protein PilI D B479_24410 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D B479_24885 type IV pili biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM D B479_24880 fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D B479_24875 type IV pili biogenesis protein PilP K23985 pilOP; type IV pilus assembly protein PilOP D B479_24870 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D B479_24935 twitching motility protein K02669 pilT; twitching motility protein PilT D B479_03570 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D B479_03575 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D B479_03560 type IV pili biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT D B479_07640 peptidoglycan-binding LysM K08086 fimV; pilus assembly protein FimV D B479_03385 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D B479_21335 protein TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D B479_21325 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D B479_21320 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D B479_21295 CheY family response regulator K02282 cpaE; pilus assembly protein CpaE D B479_21290 pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D B479_21285 protein TadB K12510 tadB; tight adherence protein B D B479_21280 type II secretion system protein membrane protein K12511 tadC; tight adherence protein C D B479_21340 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D B479_24950 YGGT family protein K02221 yggT; YggT family protein D B479_07015 Helix-hairpin-helix repeat-containing competence protein ComEA K02237 comEA; competence protein ComEA D B479_07395 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D B479_18620 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D B479_18625 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D B479_18505 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D B479_18705 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D B479_18695 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D B479_18690 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D B479_18650 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D B479_18645 flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ D B479_18640 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D B479_18635 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D B479_18630 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D B479_05665 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D B479_02570 outer membrane autotransporter K12686 apeE; outer membrane lipase/esterase D B479_05575 TPS family activation/secretion protein K11017 shlB; hemolysin activation/secretion protein D B479_05570 filamentous hemagglutinin outer membrane protein K11016 shlA; hemolysin D B479_15905 hypothetical protein K11891 impL; type VI secretion system protein ImpL D B479_17350 ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14135 ImcF domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_14145 OmpA/MotB domain-containing protein K11891 impL; type VI secretion system protein ImpL D B479_17380 hypothetical protein K11892 impK; type VI secretion system protein ImpK D B479_14130 hypothetical protein K11892 impK; type VI secretion system protein ImpK D B479_11255 hypothetical protein K11892 impK; type VI secretion system protein ImpK D B479_14125 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D B479_15900 hypothetical protein K11895 impH; type VI secretion system protein ImpH D B479_14110 hypothetical protein K11895 impH; type VI secretion system protein ImpH D B479_14105 type VI secretion protein K11896 impG; type VI secretion system protein ImpG D B479_14100 type VI secretion system lysozyme-like protein K11897 impF; type VI secretion system protein ImpF D B479_17370 hypothetical protein K11900 impC; type VI secretion system protein ImpC D B479_14095 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D B479_17365 hypothetical protein K11901 impB; type VI secretion system protein ImpB D B479_14090 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D B479_14155 ImpA family type VI secretion-associated protein K11902 impA; type VI secretion system protein ImpA D B479_01210 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_23875 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_23895 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_22650 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_14150 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_04150 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D B479_14600 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D B479_14065 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D B479_11260 ImpA family type VI secretion-associated protein K11904 vgrG; type VI secretion system secreted protein VgrG D B479_14120 putative lipoprotein K11906 vasD; type VI secretion system protein VasD D B479_14115 type VI secretion ATPase K11907 vasG; type VI secretion system protein VasG D B479_17355 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ D B479_14140 hypothetical protein K11890 impM; type VI secretion system protein ImpM D B479_17360 hypothetical protein K11909 vasI; type VI secretion system protein VasI D B479_07355 fimbrial protein-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D B479_09615 type 1 pili usher pathway chaperone CsuC K07346 fimC; fimbrial chaperone protein D B479_09620 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D B479_09625 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09610 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09605 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09600 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_14240 curlin-associated protein K04335 csgB; minor curlin subunit D B479_14660 curli assembly protein CsgE K04337 csgE; curli production assembly/transport component CsgE D B479_14655 curli production assembly/transport component CsgF K04338 csgF; curli production assembly/transport component CsgF D B479_14650 curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG D B479_21870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D B479_24740 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D B479_04670 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D B479_02690 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D B479_04675 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D B479_22915 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D B479_02855 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D B479_05630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D B479_25025 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D B479_04665 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D B479_00230 membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D B479_05495 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA D B479_24540 tatA; twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA D B479_05490 twin-arginine translocation protein subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D B479_24545 tatB; sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB D B479_05485 Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D B479_24550 sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ppuh02042] D B479_26340 metal ion transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D B479_05620 transporter-associated protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D B479_05570 filamentous hemagglutinin outer membrane protein K11016 shlA; hemolysin D B479_05575 TPS family activation/secretion protein K11017 shlB; hemolysin activation/secretion protein D B479_24395 hemolysin III family channel protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ppuh02022] D B479_26335 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D B479_26330 transcriptional regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D B479_20445 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D B479_20450 two component transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D B479_01670 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D B479_01665 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D B479_20470 integral membrane sensor signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D B479_20475 two component transcriptional regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D B479_19130 two component transcriptional regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D B479_02145 sensory histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D B479_02140 DNA-binding response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D B479_04480 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00335 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00470 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_08410 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_21110 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_04485 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00330 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00465 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00550 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_21105 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_08415 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_11040 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_18000 integral membrane sensor signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D B479_11035 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D B479_18005 two component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D B479_17715 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D B479_17710 two component transcriptional regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D B479_21195 integral membrane sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D B479_21200 two component transcriptional regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D B479_06305 sensor histidine kinase K19609 pfeS; two-component system, OmpR family, sensor histidine kinase PfeS [EC:2.7.13.3] D B479_06300 two component transcriptional regulator K19610 pfeR; two-component system, OmpR family, response regulator PfeR D B479_14515 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D B479_19140 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D B479_01790 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_14940 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_09655 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_14520 two component winged helix family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_09830 two component winged helix family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_15870 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_05340 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_09540 two component winged helix family transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D B479_11505 integral membrane sensor signal transduction histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D B479_06295 multi-sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D B479_17415 two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D B479_11510 two component LuxR family transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D B479_08120 PAS/PAC sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D B479_14325 Hpt sensor hybrid histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D B479_14320 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_08125 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_20875 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_03380 two component LuxR family transcriptional regulator K27077 pprB; two-component system, NarL family, response regulator PprB D B479_01305 LytTR family two component transcriptional regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D B479_24720 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D B479_24725 nitrogen metabolism transcriptional regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D B479_22820 two component sigma54 specific Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D B479_14355 two component sigma54 specific Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D B479_01755 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D B479_21370 integral membrane sensor signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D B479_21375 two component sigma-54 specific Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D B479_01750 two component sigma54 specific Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D B479_00990 multi-sensor signal transduction histidine kinase K11383 kinB; two-component system, NtrC family, sensor histidine kinase KinB [EC:2.7.13.3] D B479_00995 two component sigma-54 specific Fis family transcriptional regulator K11384 algB; two-component system, NtrC family, response regulator AlgB D B479_12525 sensor histidine kinase/response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D B479_18590 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D B479_18600 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D B479_18585 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_16055 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_13185 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D B479_04510 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_08270 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_18865 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_24405 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D B479_24425 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG D B479_24420 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH D B479_05765 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D B479_05775 response regulator receiver modulated diguanylate cyclase K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D B479_05770 chemotaxis-specific methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D B479_09590 GAF sensor signal transduction histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D B479_15155 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D B479_15150 LuxR family DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D B479_18720 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D B479_18715 Two component, sigma54 specific, Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D B479_20995 integral membrane sensor signal transduction histidine kinase K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3] D B479_21000 two component sigma54 specific Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR D B479_04930 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D B479_04935 two component Fis family transcriptional regulator K15012 regA; two-component system, response regulator RegA D B479_07310 histidine kinase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D B479_17785 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_11470 PAS/PAC sensor hybrid histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D B479_18670 Hpt protein K20976 hptB; histidine phosphotransfer protein HptB D B479_18675 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D B479_08085 putative nitrate-binding protein NasS K22067 nasS; two-component system, oxyanion-binding sensor D B479_08080 response regulator receiver/ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D B479_23355 integral membrane sensor signal transduction histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D B479_23565 integral membrane sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS C 02035 Bacterial motility proteins [BR:ppuh02035] D B479_18590 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D B479_18560 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D B479_18565 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D B479_16060 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D B479_18860 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D B479_18585 chemotaxis-specific protein-glutamate methyltransferase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_16055 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D B479_13185 signal transduction histidine kinase with CheB and CheR activity K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D B479_18600 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D B479_18595 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D B479_04510 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_08270 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_18865 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D B479_21545 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_09205 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_13760 methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_22570 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_14330 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_02050 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_15180 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_07055 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_11310 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_03430 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_20250 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_24560 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_24565 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_12230 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_08220 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D B479_04385 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D B479_08175 methyl-accepting chemotaxis sensory transducer K03776 aer; aerotaxis receptor D B479_09240 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D B479_19220 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D B479_17345 Pas/Pac sensor-containing chemotaxis sensory transducer K03776 aer; aerotaxis receptor D B479_18695 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D B479_18690 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D B479_18685 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ D B479_18645 flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ D B479_18640 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D B479_18635 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D B479_18630 fliR; flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D B479_18620 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D B479_18625 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D B479_18700 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D B479_18655 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D B479_18650 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D B479_18705 fliF; flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF D B479_18815 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D B479_18870 flgA; flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D B479_18820 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D B479_18660 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D B479_25590 flagellar basal body-associated protein FliL-like protein K02415 fliL; flagellar protein FliL D B479_18710 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D B479_18665 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D B479_18855 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D B479_18850 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D B479_18845 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D B479_18830 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D B479_18825 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D B479_18810 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D B479_18840 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D B479_18805 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D B479_18800 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D B479_18880 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN D B479_20890 OmpA/MotB domain-containing protein K21218 motY; sodium-type flagellar protein MotY D B479_18750 flagellin K02406 fliC; flagellin D B479_18740 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D B479_18735 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D B479_18730 hypothetical protein K02423 fliT; flagellar protein FliT D B479_18605 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D B479_18580 motC; flagellar motor protein K02556 motA; chemotaxis protein MotA D B479_23990 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D B479_18575 flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D B479_23985 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D B479_18725 sigma-54 dependent transcription regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D B479_18720 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D B479_18715 Two component, sigma54 specific, Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D B479_01565 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D B479_25270 periplasmic binding protein from ABC-type transporter K02424 tcyA; L-cystine transport system substrate-binding protein D B479_18875 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D B479_18745 flagellin FlaG K06603 flaG; flagellar protein FlaG D B479_18615 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF D B479_18610 protein FleN K04562 flhG; flagellar biosynthesis protein FlhG D B479_24425 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG D B479_24420 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH D B479_24415 CheW protein K02659 pilI; twitching motility protein PilI D B479_24410 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D B479_24405 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D B479_24935 twitching motility protein K02669 pilT; twitching motility protein PilT D B479_24400 CheW domain-containing protein K06598 chpC; chemosensory pili system protein ChpC D B479_03660 fimbrial protein pilin K02650 pilA; type IV pilus assembly protein PilA D B479_03655 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D B479_03650 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D B479_04750 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D B479_24870 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D B479_24875 type IV pili biogenesis protein PilP K23985 pilOP; type IV pilus assembly protein PilOP D B479_24880 fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D B479_24885 type IV pili biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM D B479_03570 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D B479_03575 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D B479_03580 type IV pili biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE D B479_21340 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D B479_03385 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D B479_21335 protein TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D B479_21325 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D B479_21320 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D B479_21295 CheY family response regulator K02282 cpaE; pilus assembly protein CpaE D B479_21290 pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D B479_07355 fimbrial protein-like protein K07345 fimA; major type 1 subunit fimbrin (pilin) D B479_09615 type 1 pili usher pathway chaperone CsuC K07346 fimC; fimbrial chaperone protein D B479_09620 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D B479_09625 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09610 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09605 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09600 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D B479_09595 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ppuh04812] D B479_04980 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D B479_21885 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D B479_21890 cell division protein FtsA K03590 ftsA; cell division protein FtsA D B479_06670 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D B479_06665 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D B479_06660 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D B479_09885 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D B479_18570 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D B479_00210 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D B479_24820 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D B479_13940 Putative ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D B479_00205 ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ppuh04147] D B479_17815 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D B479_06110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D B479_05325 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_08370 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D B479_24275 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D B479_21590 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_18370 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D B479_19305 PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D B479_01990 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D B479_17975 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D B479_20905 Anti-oxidant AhpCTSA family protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D B479_21790 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D B479_22980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D B479_22845 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D B479_13050 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D B479_05435 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D B479_02685 elongation factor Tu K02358 tuf; elongation factor Tu D B479_02745 elongation factor Tu K02358 tuf; elongation factor Tu D B479_02620 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D B479_12315 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D B479_19345 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_19350 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D B479_22460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_03420 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_07960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_16030 beta-ketothiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_09025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D B479_24345 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D B479_05840 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D B479_18185 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D B479_01300 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D B479_20885 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D B479_19660 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D B479_10915 aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D B479_17135 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D B479_22360 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2] D B479_24665 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D B479_17215 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D B479_20955 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D B479_25445 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_25455 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_13545 glutamate-putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_26230 glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_19335 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_11380 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_15670 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_24710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D B479_14910 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D B479_14425 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D B479_19065 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D B479_25260 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D B479_23555 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D B479_26565 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17855 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_18925 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D B479_17925 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D B479_05390 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_26485 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_17160 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D B479_22920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D B479_17105 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein D B479_24650 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:ppuh02048] D B479_10615 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_08490 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_10125 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_03675 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D B479_20050 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D B479_04345 toxin ChpB K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D B479_04340 transcriptional regulator/antitoxin MazE K18842 chpS; antitoxin ChpS D B479_10835 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D B479_10830 hypothetical protein K18923 stbD; antitoxin StbD D B479_00575 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D B479_00570 DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D B479_27069 VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D B479_27064 VagC K18829 mvpT; antitoxin VapB D B479_21885 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D B479_04980 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D B479_24025 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D B479_24040 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D B479_07570 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D B479_21175 hypothetical protein K19168 cptA; toxin CptA D B479_21180 hypothetical protein K09159 cptB; antitoxin CptB D B479_04705 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D B479_16325 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:ppuh04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:ppuh04090] C 01504 Antimicrobial resistance genes [BR:ppuh01504] D B479_26994 Vim-1 K18781 blaVIM; metallo-beta-lactamase class B VIM [EC:3.5.2.6] D B479_26989 Aac(6)-Ib K19278 aac6-Ib; aminoglycoside 6'-N-acetyltransferase Ib [EC:2.3.1.82] D B479_27254 aminoglycoside 2''-O-adenyltransferase protein K17881 aadB; aminoglycoside 2''-adenylyltransferase [EC:2.7.7.46] D B479_26984 aminoglycoside resistance protein K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D B479_26894 aminoglycoside 3'-phosphotransferase K19272 aph3-I; aminoglycoside 3'-phosphotransferase I [EC:2.7.1.95] D B479_26879 StrA K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87] D B479_26874 streptomycin 3''-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D B479_26854 tetracycline efflux protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D B479_21825 multidrug efflux system translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D B479_06930 putative acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D B479_26979 hypothetical protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D B479_26829 dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D B479_26969 dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D B479_26869 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D B479_27189 class-A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D B479_04480 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00335 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_00470 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_08410 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_21110 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D B479_04485 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00330 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00465 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_00550 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_21105 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_08415 two component heavy metal response transcriptional regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D B479_12100 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D B479_15740 LysR family transcriptional regulator K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D B479_09900 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_20360 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_25995 outer membrane porin K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] D B479_20380 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D B479_20445 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D B479_20450 two component transcriptional regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D B479_21455 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_14525 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21750 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D B479_25830 toluene efflux pump periplasmic linker protein TtgG K03585 acrA; membrane fusion protein, multidrug efflux system D B479_21460 hydrophobe/amphiphile efflux-1 (HAE1) family protein K18138 acrB; multidrug efflux pump D B479_25825 toluene efflux pump membrane transporter TtgH K18138 acrB; multidrug efflux pump D B479_21755 multidrug efflux protein K18138 acrB; multidrug efflux pump D B479_14530 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D B479_25820 toluene efflux pump outer membrane protein TtgI K18139 oprM; outer membrane protein, multidrug efflux system D B479_21465 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_17965 RND efflux system outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system D B479_13795 NfxB family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D B479_13775 NfxB family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D B479_13790 multidrug efflux RND membrane fusion protein MexC K18295 mexC; membrane fusion protein, multidrug efflux system D B479_13785 multidrug efflux RND transporter MexD K18296 mexD; multidrug efflux pump D B479_14385 RND family efflux transporter, MFP subunit K18298 mexE; membrane fusion protein, multidrug efflux system D B479_14390 hydrophobe/amphiphile efflux-1 (HAE1) family protein K18299 mexF; multidrug efflux pump D B479_14395 RND efflux system outer membrane lipoprotein K18300 oprN; outer membrane protein, multidrug efflux system D B479_05885 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D B479_05900 RND family efflux transporter, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D B479_05905 acriflavin resistance protein K18303 mexK; multidrug efflux pump D B479_03435 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D B479_11780 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D B479_12090 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D B479_24080 TolC family type I secretion outer membrane protein K12340 tolC; outer membrane protein D B479_14320 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_08125 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D B479_20875 two component LuxR family transcriptional regulator K07690 evgA; two-component system, NarL family, response regulator EvgA C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ppuh00537] D B479_01990 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D B479_17975 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:ppuh03200] D B479_08635 lysis protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ppuh03100] D B479_t26689 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26629 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26709 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26693 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D B479_t26711 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26631 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26739 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26735 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26737 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26741 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D B479_t26649 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D B479_t26687 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D B479_t26669 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26701 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26703 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26699 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26673 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D B479_t26729 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D B479_t26663 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D B479_t26719 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D B479_t26677 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26691 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26681 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D B479_t26683 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26733 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26679 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26641 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26753 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D B479_t26713 tRNA-His K14226 tRNA-His; tRNA His D B479_t26717 tRNA-His K14226 tRNA-His; tRNA His D B479_t26627 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D B479_t26707 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D B479_t26757 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D B479_t26715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26761 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26727 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26763 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26765 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D B479_t26653 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D B479_t26657 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D B479_t26747 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D B479_t26637 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26759 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26661 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26749 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26751 tRNA-Met K14230 tRNA-Met; tRNA Met D B479_t26635 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D B479_t26725 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26705 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26651 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26655 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D B479_t26675 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26743 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26731 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D B479_t26633 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D B479_t26643 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D B479_t26659 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D B479_t26645 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D B479_t26639 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D B479_t26723 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26721 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26667 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26671 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26697 tRNA-Val K14237 tRNA-Val; tRNA Val D B479_t26647 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D B479_r26793 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26795 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26783 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26787 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26789 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26791 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D B479_r26809 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26807 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26797 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26799 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26801 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26803 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26805 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D B479_r26775 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26767 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26771 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26777 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26781 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26779 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26769 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D B479_r26773 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D B479_01940 3-hydroxybutyryl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D B479_09680 dkgB; 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D B479_15755 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D B479_03285 TPP-dependent acetoin dehydrogenase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D B479_03280 transketolase central region K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D B479_08935 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D B479_25070 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D B479_11705 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D B479_15600 aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D B479_07715 NADH:flavin oxidoreductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D B479_18535 pyrroloquinoline quinone (coenzyme pqq) biosynthesis protein c K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D B479_02365 pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D B479_15455 2Fe-2S iron-sulfur cluster binding domain-containing protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D B479_15460 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D B479_17935 electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D B479_04205 FAD dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D B479_00690 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D B479_25595 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D B479_12590 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D B479_22585 NAD(P)H dehydrogenase (quinone) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D B479_12255 azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D B479_19285 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D B479_25125 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D B479_16430 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D B479_16450 cytochrome c class I K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D B479_02160 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D B479_07300 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D B479_12480 S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D B479_17440 glutathione S-transferase domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D B479_16955 glutathione S-transferase domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D B479_22715 TMAO/DMSO reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D B479_07725 cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17] D B479_12520 cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D B479_17070 alpha/beta hydrolase fold protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D B479_26010 alpha/beta hydrolase fold protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D B479_20215 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D B479_15325 redoxin domain-containing protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D B479_01610 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D B479_16435 alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D B479_00775 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D B479_07235 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D B479_13315 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D B479_16270 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D B479_10975 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D B479_14275 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D B479_01475 taurine dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D B479_04810 Fe(II)-dependent oxygenase superfamily protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D B479_04520 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D B479_16160 L-ornithine N5-oxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196] D B479_15035 monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D B479_01540 DszA family monooxygenase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D B479_15585 luciferase family protein K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D B479_27209 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D B479_00005 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D B479_14740 hypothetical protein K22349 mnxG; manganese oxidase [EC:1.16.3.3] D B479_13370 multicopper oxidase type 2 K22350 mcoA; manganese oxidase [EC:1.16.3.3] D B479_22510 oxidoreductase, FAD/NAD(P)-binding subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D B479_06235 oxidoreductase FAD/NAD(P)-binding subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D B479_06270 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D B479_02355 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D B479_12895 short-chain dehydrogenase/reductase SDR K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D B479_06155 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D B479_26560 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D B479_11425 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D B479_10880 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D B479_24165 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D B479_14760 malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D B479_25300 hexapeptide repeat-containing transferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D B479_19325 3-oxoacyl-(acyl carrier protein) synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D B479_23400 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D B479_21655 phospholipid/glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D B479_07995 N-acetyltransferase GCN5 K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D B479_20420 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D B479_23685 branched chain amino acid ABC transporter ATP-binding protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D B479_16990 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D B479_16995 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D B479_14785 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D B479_06215 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D B479_19215 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D B479_25195 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D B479_08375 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D B479_15120 putative ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D B479_08020 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D B479_06760 hypothetical protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D B479_02180 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D B479_14765 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D B479_24810 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D B479_19435 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D B479_01490 arylsulfotransferase K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D B479_05695 L-carnitine dehydratase/bile acid-inducible protein F K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D B479_24485 poly(3-hydroxyalkanoate) depolymerase K22250 phaZ; poly(3-hydroxyoctanoate) depolymerase [EC:3.1.1.76] D B479_01935 hypothetical protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33] D B479_01705 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D B479_07955 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D B479_07585 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D B479_19115 phosphotransferase domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D B479_17760 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D B479_14430 diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D B479_00985 EAL domain-containing protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D B479_00715 choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D B479_07930 beta-lactamase domain-containing protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D B479_12775 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D B479_09375 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D B479_04430 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D B479_07515 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D B479_08625 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D B479_00670 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D B479_19405 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D B479_20785 penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D B479_14970 penicillin amidase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D B479_12805 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K18540 ramA; (R)-amidase [EC:3.5.1.100] D B479_05010 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D B479_15595 alpha/beta hydrolase fold protein K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D B479_11105 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D B479_09195 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D B479_07455 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D B479_07855 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D B479_12630 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D B479_25345 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D B479_14775 malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D B479_14770 malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D B479_23960 carbohydrate kinase YjeF-like protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D B479_05970 class V aminotransferase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D B479_18430 FKBP-type peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D B479_05350 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D B479_21700 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D B479_03240 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D B479_20850 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D B479_15130 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D B479_15125 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D B479_18160 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D B479_00520 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D B479_25180 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D B479_22790 DNA-binding transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D B479_01720 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D B479_06170 4Fe-4S ferredoxin K05524 fdxA; ferredoxin D B479_20855 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D B479_20860 hypothetical protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D B479_20845 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D B479_22400 flavodoxin K06205 mioC; MioC protein D B479_04710 scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins D B479_11735 tricarballylate utilization protein B K13795 citB; citrate/tricarballylate utilization protein D B479_11730 tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase D B479_17930 Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D B479_00760 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D B479_23350 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase D B479_25130 hypothetical protein K21830 pchP; phosphorylcholine phosphatase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D B479_04400 sulfate transport protein CysZ K06203 cysZ; CysZ protein D B479_26580 ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter D B479_10995 glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein D B479_24940 alanine racemase domain-containing protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D B479_22165 Sel1 domain-containing protein K19292 algK; alginate biosynthesis protein AlgK D B479_13220 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D B479_06180 hypothetical protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D B479_12450 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D B479_01325 HemY domain-containing protein K02498 hemY; HemY protein D B479_24525 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D B479_24520 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D B479_25720 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D B479_12465 magnesium chelatase subunit ChlD K13580 K13580; magnesium chelatase subunit ChlD-like protein C 99988 Secondary metabolism D B479_17605 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D B479_09385 DoxX family protein K15977 K15977; putative oxidoreductase D B479_09815 hypothetical protein K15977 K15977; putative oxidoreductase D B479_16525 DoxX family protein K15977 K15977; putative oxidoreductase D B479_22115 carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D B479_05935 cold-shock DNA-binding domain-containing protein K03704 cspA; cold shock protein D B479_10025 cold shock protein CspA K03704 cspA; cold shock protein D B479_20345 cold-shock DNA-binding domain-containing protein K03704 cspA; cold shock protein D B479_20830 CapB K03704 cspA; cold shock protein D B479_05220 cold-shock DNA-binding domain-containing protein K03704 cspA; cold shock protein D B479_17015 cold-shock DNA-binding domain-containing protein K03704 cspA; cold shock protein D B479_01335 anti-RNA polymerase sigma 70 factor K07740 rsd; regulator of sigma D D B479_25715 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D B479_01660 RNA-binding S1 domain-containing protein K06959 tex; protein Tex C 99974 Translation D B479_25575 ABC transporter ATP-binding protein/permease K13926 rbbA; ribosome-dependent ATPase D B479_06880 beta-lactamase domain-containing protein K07576 K07576; metallo-beta-lactamase family protein D B479_11980 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein D B479_20795 exonuclease K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D B479_06280 putative lipoprotein K03668 hslJ; heat shock protein HslJ D B479_17010 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D B479_09315 tig; trigger factor K03545 tig; trigger factor D B479_22710 sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D B479_02950 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D B479_12160 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D B479_12170 urease accessory protein UreF K03188 ureF; urease accessory protein D B479_12175 urease accessory protein UreG K03189 ureG; urease accessory protein D B479_12140 urease accessory protein UreD K03190 ureD; urease accessory protein D B479_12165 HupE/UreJ protein K03192 ureJ; urease accessory protein D B479_23015 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D B479_25940 Mg chelatase, ChlI subunit K07391 comM; magnesium chelatase family protein D B479_25730 Mg chelatase, ChlI subunit K07391 comM; magnesium chelatase family protein D B479_25280 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D B479_11865 proteasome-type protease K07395 K07395; putative proteasome-type protease D B479_06790 DSBA oxidoreductase K07396 K07396; putative protein-disulfide isomerase D B479_02605 OsmC family protein K07397 yhfA; putative redox protein D B479_09725 protein YhgI K07400 nfuA; Fe/S biogenesis protein NfuA D B479_19180 putative selenoprotein K07401 K07401; selenoprotein W-related protein D B479_18030 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D B479_15470 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D B479_18265 putative xanthine dehydrogenase accessory factor XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D B479_01375 membrane-bound protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D B479_21815 methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D B479_26165 hypothetical protein K03630 radC; DNA repair protein RadC D B479_23075 DNA repair protein RadC K03630 radC; DNA repair protein RadC D B479_06505 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D B479_13740 ATP-dependent endonuclease family protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D B479_21970 hypothetical protein K07460 yraN; putative endonuclease D B479_05160 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease D B479_00675 DNA protecting protein DprA K04096 smf; DNA processing protein D B479_20040 hypothetical protein K07474 xtmA; phage terminase small subunit D B479_08645 terminase small subunit K07474 xtmA; phage terminase small subunit D B479_16975 recombination factor protein RarA K07478 ycaJ; putative ATPase D B479_26889 transposase K18320 IS15; transposase, IS6 family D B479_26819 transposase for insertion sequence IS6100 K18320 IS15; transposase, IS6 family D B479_27264 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D B479_10810 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D B479_03350 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D B479_25410 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D B479_26954 putative transposase K07497 K07497; putative transposase D B479_00275 integrase catalytic region K07497 K07497; putative transposase D B479_25930 transposase K07497 K07497; putative transposase D B479_19905 integrase family protein K14059 int; integrase D B479_16915 phage integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D B479_18195 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D B479_20560 formate/nitrate transporter K21990 yfdC; formate-nitrite transporter family protein D B479_21035 amino acid permease-associated protein K03293 TC.AAT; amino acid transporter, AAT family D B479_01070 CitMHS family citrate/H+ symporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D B479_11755 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D B479_13305 major facilitator superfamily transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family D B479_17435 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D B479_19235 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D B479_02970 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D B479_17840 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D B479_13320 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D B479_06530 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D B479_17130 cytosine/purines uracil thiamine allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D B479_18410 cytosine/purines uracil thiamine allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D B479_15645 cytosine/purines uracil thiamine allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D B479_19275 cytosine/purines uracil thiamine allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D B479_16660 hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D B479_19120 intracellular septation protein A K06190 ispZ; intracellular septation protein D B479_02455 SpoVR family protein K06415 spoVR; stage V sporulation protein R D B479_24760 peptidase M23B K22719 envC; murein hydrolase activator C 99993 Cell motility D B479_01180 Surface adhesion protein, putative K12549 lapA; surface adhesion protein D B479_07350 pili assembly chaperone K15540 ecpD; chaperone protein EcpD C 99995 Signaling proteins D B479_04425 signaling modulator of AmpD, AmpE K03807 ampE; AmpE protein D B479_08290 UspA domain-containing protein K06149 uspA; universal stress protein A D B479_11975 UspA domain-containing protein K14055 uspE; universal stress protein E D B479_13500 UspA domain-containing protein K14055 uspE; universal stress protein E D B479_24700 GTP-binding protein TypA K06207 typA; GTP-binding protein D B479_09550 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D B479_23385 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D B479_22135 PhoH family protein K07175 phoH2; PhoH-like ATPase D B479_02465 PrkA family serine protein kinase K07180 prkA; serine protein kinase D B479_02250 hypothetical protein K07182 K07182; CBS domain-containing protein D B479_15505 SH3 type 3 domain-containing protein K07184 ygiM; SH3 domain protein D B479_16510 non-specific serine/threonine protein kinase K08482 kaiC; circadian clock protein KaiC D B479_21835 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D B479_16980 lolA; lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein D B479_04125 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D B479_08435 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D B479_09650 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D B479_06685 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D B479_20695 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB D B479_15720 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D B479_01415 outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB D B479_06055 outer membrane chaperone Skp K06142 hlpA; outer membrane protein D B479_06160 peptidase M23B K06194 nlpD; lipoprotein NlpD D B479_03010 OmpW family protein K07275 ompW; outer membrane protein D B479_04260 lipoprotein K07286 yajG; uncharacterized lipoprotein D B479_01870 AsmA family protein K07289 asmA; AsmA protein D B479_23740 AsmA family protein K07290 yhjG; AsmA family protein D B479_23620 hypothetical protein K07340 ybbJ; inner membrane protein D B479_25570 secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein D B479_03185 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D B479_23730 DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE D B479_12570 DNA-binding transcriptional activator OsmE K04064 osmE; osmotically inducible lipoprotein OsmE D B479_02150 hypothetical protein K06143 creD; inner membrane protein D B479_18475 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D B479_18455 cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D B479_18460 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D B479_04755 XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ D B479_20600 hypothetical protein K21695 aaeX; protein AaeX C 99994 Others D B479_26355 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein D B479_20915 BFD (2Fe-2S)-binding domain-containing protein K02192 bfd; bacterioferritin-associated ferredoxin D B479_24590 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D B479_02480 apaG; CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein D B479_25670 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D B479_15260 putative monooxygenase K07222 K07222; putative flavoprotein involved in K+ transport D B479_21730 hypothetical protein K07231 K07231; putative iron-regulated protein D B479_00310 copper resistance B K07233 pcoB; copper resistance protein B D B479_03155 copper resistance B K07233 pcoB; copper resistance protein B D B479_12130 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D B479_13230 Metallothionein, putative K21904 smtA; metallothionein B B 09194 Poorly characterized C 99996 General function prediction only D B479_21005 GlpM family protein K02442 glpM; membrane protein GlpM D B479_07670 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D B479_11075 hypothetical protein K06192 pqiB; paraquat-inducible protein B D B479_03515 hypothetical protein K06192 pqiB; paraquat-inducible protein B D B479_24240 acetyltransferase K02348 elaA; ElaA protein D B479_13095 phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein D B479_22875 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D B479_02375 coenzyme PQQ biosynthesis protein A K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D B479_11555 coenzyme PQQ biosynthesis protein A K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D B479_02370 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D B479_02360 pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D B479_11560 pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D B479_09345 patatin K07001 K07001; NTE family protein D B479_19185 patatin K07001 K07001; NTE family protein D B479_06680 patatin K07001 K07001; NTE family protein D B479_12840 patatin K07001 K07001; NTE family protein D B479_02645 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D B479_13435 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D B479_19410 ribonuclease BN K07058 K07058; membrane protein D B479_21800 fxsA; phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D B479_05965 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE D B479_06785 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D B479_17040 lysogenization regulator K07153 hflD; high frequency lysogenization protein D B479_14475 glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein D B479_15990 hypothetical protein K11477 glcG; glc operon protein GlcG D B479_14500 bacteriophage N4 receptor, outer membrane subunit K11739 nfrA; bacteriophage N4 adsorption protein A D B479_14495 nfrB; bacteriophage N4 adsorption protein B K11740 nfrB; bacteriophage N4 adsorption protein B D B479_11710 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D B479_20350 hypothetical protein K03745 slyX; SlyX protein D B479_03895 CreA family protein K05805 creA; CreA protein D B479_06240 hypothetical protein K02742 sprT; SprT protein D B479_07665 sporulation domain-containing protein K03749 dedD; DedD protein D B479_24855 sporulation domain-containing protein K03112 damX; DamX protein D B479_03205 hypothetical protein K03975 dedA; membrane-associated protein D B479_11065 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D B479_11070 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D B479_03505 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D B479_03510 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D B479_10575 hypothetical protein K01421 yhgE; putative membrane protein D B479_07920 hypothetical protein K00389 yidH; putative membrane protein D B479_11630 hypothetical protein K08984 yjdF; putative membrane protein D B479_20680 lipoprotein K08985 K08985; putative lipoprotein D B479_21360 hypothetical protein K08988 K08988; putative membrane protein D B479_20740 hypothetical protein K08993 yhhL; putative membrane protein D B479_13340 lipoprotein K08995 K08995; putative membrane protein D B479_20760 hypothetical protein K09858 K09858; SEC-C motif domain protein D B479_05915 lipoprotein K09914 K09914; putative lipoprotein D B479_05925 putative lipoprotein K09914 K09914; putative lipoprotein D B479_15235 cupin K11312 K11312; cupin 2 domain-containing protein D B479_03865 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D B479_15060 ankyrin K06867 K06867; uncharacterized protein D B479_07125 ankyrin K06867 K06867; uncharacterized protein D B479_14555 quinohemoprotein amine dehydrogenase K06871 K06871; uncharacterized protein D B479_13180 hypothetical protein K06884 K06884; uncharacterized protein D B479_13300 hypothetical protein K06884 K06884; uncharacterized protein D B479_07105 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein D B479_05810 lipoprotein K06889 K06889; uncharacterized protein D B479_18515 hypothetical protein K06889 K06889; uncharacterized protein D B479_23860 hypothetical protein K06890 K06890; uncharacterized protein D B479_16785 hypothetical protein K06903 W; Bacteriophage baseplate protein W D B479_16840 phage late control D K06905 D; Bacteriophage probable baseplate hub protein D B479_16835 tail formation protein, phage P2 GpU K06906 gpU; phage tail protein D B479_16810 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein D B479_16815 phage P2 FII-like protein K06908 FII; Bacteriophage tail tube protein D B479_07315 hypothetical protein K06923 K06923; uncharacterized protein D B479_09515 hypothetical protein K06938 K06938; uncharacterized protein D B479_05600 hypothetical protein K06938 K06938; uncharacterized protein D B479_15485 hypothetical protein K06938 K06938; uncharacterized protein D B479_26105 hypothetical protein K06940 K06940; uncharacterized protein D B479_10535 hypothetical protein K06940 K06940; uncharacterized protein D B479_04565 hypothetical protein K06940 K06940; uncharacterized protein D B479_23170 hypothetical protein K06940 K06940; uncharacterized protein D B479_24675 hypothetical protein K06940 K06940; uncharacterized protein D B479_10645 Metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D B479_03590 hypothetical protein K06950 K06950; uncharacterized protein D B479_20815 putative ICC-like protein phosphoesterase K06953 K06953; uncharacterized protein D B479_11435 amine oxidase K06954 K06954; uncharacterized protein D B479_25135 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D B479_09430 hypothetical protein K06975 K06975; uncharacterized protein D B479_21555 hypothetical protein K06986 K06986; uncharacterized protein D B479_20805 succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D B479_12200 peptidase C39, bacteriocin processing K06992 K06992; uncharacterized protein D B479_04870 hypothetical protein K06995 K06995; uncharacterized protein D B479_26145 hypothetical protein K06995 K06995; uncharacterized protein D B479_22645 hypothetical protein K06995 K06995; uncharacterized protein D B479_24045 hypothetical protein K07000 K07000; uncharacterized protein D B479_07770 hypothetical protein K07003 K07003; uncharacterized protein D B479_12650 putative transporter K07003 K07003; uncharacterized protein D B479_12085 RND efflux transporter K07003 K07003; uncharacterized protein D B479_13815 hypothetical protein K07003 K07003; uncharacterized protein D B479_20520 oxidoreductase FAD-binding protein K07006 K07006; uncharacterized protein D B479_22045 hypothetical protein K07018 K07018; uncharacterized protein D B479_25055 alpha/beta hydrolase fold protein K07019 K07019; uncharacterized protein D B479_18105 hypothetical protein K07020 K07020; uncharacterized protein D B479_22755 hypothetical protein K07028 K07028; uncharacterized protein D B479_19200 YecA family protein K07039 K07039; uncharacterized protein D B479_20530 hypothetical protein K07039 K07039; uncharacterized protein D B479_20535 metal-binding protein K07039 K07039; uncharacterized protein D B479_22565 metallopeptidase, zinc binding protein K07054 K07054; uncharacterized protein D B479_00815 hypothetical protein K07070 K07070; uncharacterized protein D B479_04210 NAD-dependent epimerase/dehydratase K07071 K07071; uncharacterized protein D B479_25200 hypothetical protein K07090 K07090; uncharacterized protein D B479_05425 hypothetical protein K07090 K07090; uncharacterized protein D B479_02920 hypothetical protein K07090 K07090; uncharacterized protein D B479_00600 hypothetical protein K07090 K07090; uncharacterized protein D B479_09180 hypothetical protein K07090 K07090; uncharacterized protein D B479_22595 hypothetical protein K07090 K07090; uncharacterized protein D B479_02980 hypothetical protein K07090 K07090; uncharacterized protein D B479_07250 hypothetical protein K07090 K07090; uncharacterized protein D B479_17080 hypothetical protein K07090 K07090; uncharacterized protein D B479_16685 hypothetical protein K07090 K07090; uncharacterized protein D B479_21715 hypothetical protein K07090 K07090; uncharacterized protein D B479_05505 hypothetical protein K07093 K07093; uncharacterized protein D B479_12825 hypothetical protein K07112 K07112; uncharacterized protein D B479_12830 YeeE/YedE family protein K07112 K07112; uncharacterized protein D B479_21425 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein D B479_13015 abrB protein K07120 K07120; uncharacterized protein D B479_21225 putative ammonia monooxygenase K07120 K07120; uncharacterized protein D B479_21965 LppC family lipoprotein K07121 K07121; uncharacterized protein D B479_12900 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D B479_02625 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D B479_04815 Sel1 domain-containing protein K07126 K07126; uncharacterized protein D B479_23375 Sel1 domain-containing protein K07126 K07126; uncharacterized protein D B479_20685 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D B479_08275 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D B479_23515 peptidase S16 lon domain-containing protein K07157 K07157; uncharacterized protein D B479_00235 hypothetical protein K08998 K08998; uncharacterized protein D B479_27059 hypothetical protein K09005 K09005; uncharacterized protein D B479_23455 hypothetical protein K09158 K09158; uncharacterized protein D B479_19620 hypothetical protein K09160 K09160; uncharacterized protein D B479_09775 hypothetical protein K09190 K09190; uncharacterized protein D B479_11430 hypothetical protein K09701 K09701; uncharacterized protein D B479_10740 hypothetical protein K09703 K09703; uncharacterized protein D B479_25650 hypothetical protein K09768 K09768; uncharacterized protein D B479_19125 hypothetical protein K09780 K09780; uncharacterized protein D B479_18335 hypothetical protein K09781 K09781; uncharacterized protein D B479_02460 hypothetical protein K09786 K09786; uncharacterized protein D B479_05300 hypothetical protein K09790 K09790; uncharacterized protein D B479_19205 hypothetical protein K09790 K09790; uncharacterized protein D B479_07415 hypothetical protein K09791 K09791; uncharacterized protein D B479_18170 hypothetical protein K09792 K09792; uncharacterized protein D B479_19655 hypothetical protein K09794 K09794; uncharacterized protein D B479_24770 hypothetical protein K09798 K09798; uncharacterized protein D B479_19425 RNA-binding S1 domain-containing protein K00243 K00243; uncharacterized protein D B479_11080 hypothetical protein K09857 K09857; uncharacterized protein D B479_24020 hypothetical protein K09857 K09857; uncharacterized protein D B479_22145 hypothetical protein K09861 K09861; uncharacterized protein D B479_03640 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D B479_25540 hypothetical protein K09895 K09895; uncharacterized protein D B479_06735 hypothetical protein K09898 K09898; uncharacterized protein D B479_19635 hypothetical protein K09902 K09902; uncharacterized protein D B479_22050 hypothetical protein K09908 K09908; uncharacterized protein D B479_06330 hypothetical protein K09912 K09912; uncharacterized protein D B479_16420 hypothetical protein K09915 K09915; uncharacterized protein D B479_07750 hypothetical protein K09916 K09916; uncharacterized protein D B479_22340 hypothetical protein K09918 K09918; uncharacterized protein D B479_19315 hypothetical protein K09919 K09919; uncharacterized protein D B479_24055 hypothetical protein K09920 K09920; uncharacterized protein D B479_25690 hypothetical protein K09921 K09921; uncharacterized protein D B479_08115 hypothetical protein K09923 K09923; uncharacterized protein D B479_06775 hypothetical protein K09924 K09924; uncharacterized protein D B479_18155 hypothetical protein K09926 K09926; uncharacterized protein D B479_07390 hypothetical protein K09928 K09928; uncharacterized protein D B479_09810 hypothetical protein K09929 K09929; uncharacterized protein D B479_09805 hypothetical protein K09930 K09930; uncharacterized protein D B479_22420 hypothetical protein K09932 K09932; uncharacterized protein D B479_06355 hypothetical protein K09938 K09938; uncharacterized protein D B479_26200 hypothetical protein K09940 K09940; uncharacterized protein D B479_23295 putative periplasmic ligand-binding sensor protein K09945 K09945; uncharacterized protein D B479_21745 hypothetical protein K09947 K09947; uncharacterized protein D B479_22430 hypothetical protein K09948 K09948; uncharacterized protein D B479_26395 hypothetical protein K09950 K09950; uncharacterized protein D B479_03015 lipoprotein K09950 K09950; uncharacterized protein D B479_04455 hypothetical protein K09954 K09954; uncharacterized protein D B479_09665 hypothetical protein K09958 K09958; uncharacterized protein D B479_08825 hypothetical protein K09962 K09962; uncharacterized protein D B479_24635 hypothetical protein K09975 K09975; uncharacterized protein D B479_07730 hypothetical protein K09977 K09977; uncharacterized protein D B479_14315 hypothetical protein K09984 K09984; uncharacterized protein D B479_07535 hypothetical protein K09986 K09986; uncharacterized protein D B479_19545 VWA containing CoxE family protein K09989 K09989; uncharacterized protein D B479_21740 lipoprotein K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024