+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Pongo pygmaeus (Bornean orangutan)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 129019019 RNMT; (RefSeq) mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 129038305 RNGTT; (RefSeq) mRNA-capping enzyme isoform X2 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 129037569 CDK7; (RefSeq) cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 129038168 CMTR1; (RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 129015566 CMTR2; (RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 129014388 RAMAC; (RefSeq) RNA guanine-N7 methyltransferase activating subunit K18708 FAM103A1; RNMT-activating mini protein
E 129045017 LOW QUALITY PROTEIN: RNA guanine-N7 methyltransferase-activating subunit-like protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 129044326 NCBP1; (RefSeq) nuclear cap-binding protein subunit 1 isoform X1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 129025212 NCBP2L; (RefSeq) nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
E 129032755 NCBP2; (RefSeq) nuclear cap-binding protein subunit 2 isoform X2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 129016166 NUDT21; (RefSeq) cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 129007635 CPSF7; (RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 129009743 CPSF6; (RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 129007420 CLP1; (RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 129009004 PCF11; (RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 129042955 CPSF1; (RefSeq) cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 129012737 CPSF2; (RefSeq) cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 129029670 CPSF3; (RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 129018300 CPSF4L; (RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 129041689 CPSF4; (RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 129035622 FIP1L1; (RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 129031180 WDR33; (RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 129033719 WD repeat-containing protein 82-like K14962 WDR82; COMPASS component SWD2
E 129034172 WDR82; (RefSeq) WD repeat-containing protein 82 isoform X1 K14962 WDR82; COMPASS component SWD2
E 129007095 PPP1CA; (RefSeq) serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 129009997 PPP1CC; (RefSeq) serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 129030061 PPP1CB; (RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 129008433 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 4 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 129008617 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 4 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 129008622 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 4 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 129008782 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 2 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 129010597 SSU72; (RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 129025215 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 129041292 SSU72L6; (RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 6 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 129021620 CSTF1; (RefSeq) cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 129024515 CSTF2; (RefSeq) cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 129045115 CSTF2T; (RefSeq) cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 129007150 CSTF3; (RefSeq) cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 129021149 SYMPK; (RefSeq) symplekin isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 129021375 SNRPB; (RefSeq) small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 129022937 SNRPD3; (RefSeq) small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 129013943 SNRPE; (RefSeq) small nuclear ribonucleoprotein E isoform X1 K11097 SNRPE; small nuclear ribonucleoprotein E
E 129015749 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 129033555 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 129044499 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 129009284 SNRPF; (RefSeq) small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 129006551 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129006754 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129013296 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129019368 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129030289 SNRPG; (RefSeq) small nuclear ribonucleoprotein G isoform X3 K11099 SNRPG; small nuclear ribonucleoprotein G
E 129030478 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129031617 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129040788 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 129040866 LSM10; (RefSeq) U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 129037193 LSM11; (RefSeq) U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 129012737 CPSF2; (RefSeq) cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 129029670 CPSF3; (RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 129024515 CSTF2; (RefSeq) cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 129045115 CSTF2T; (RefSeq) cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 129021149 SYMPK; (RefSeq) symplekin isoform X1 K06100 SYMPK; symplekin
E 129035833 SLBP; (RefSeq) histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
E 134739635 oocyte-specific histone RNA stem-loop-binding protein 2-like K18710 SLBP; histone RNA hairpin-binding protein
E 129038319 CASP8AP2; (RefSeq) CASP8-associated protein 2 isoform X2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 129030738 LOW QUALITY PROTEIN: transcription elongation factor SPT4-A K15171 SUPT4H1; transcription elongation factor SPT4
E 134738677 SUPT4H1; (RefSeq) transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 129019662 SUPT5H; (RefSeq) transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 129012530 METTL3; (RefSeq) N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 129035729 METTL14; (RefSeq) N6-adenosine-methyltransferase non-catalytic subunit isoform X1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 129018942 METTL4; (RefSeq) N(6)-adenine-specific methyltransferase METTL4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 129018281 METTL16; (RefSeq) RNA N6-adenosine-methyltransferase METTL16 isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 129038832 WTAP; (RefSeq) pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 129042524 VIRMA; (RefSeq) protein virilizer homolog isoform X1 K22910 VIRMA; protein virilizer
E 129033802 RBM15; (RefSeq) RNA-binding protein 15 isoform X1 K13190 RBM15; RNA-binding protein 15
E 129034106 RBM15B; (RefSeq) putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 129011583 ZC3H13; (RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 129040166 CBLL1; (RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 129012088 PAPOLA; (RefSeq) poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 129030117 PAPOLG; (RefSeq) poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 129041007 PAPOLB; (RefSeq) poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 129037516 TENT2; (RefSeq) poly(A) RNA polymerase GLD2 isoform X5 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 129008220 TUT1; (RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1 K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 129031667 BARD1; (RefSeq) BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 129011901 RBM26; (RefSeq) RNA-binding protein 26 isoform X18 K13192 RBM26; RNA-binding protein 26
E 129015468 FTO; (RefSeq) alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 129018039 ALKBH5; (RefSeq) RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 129008023 TARDBP; (RefSeq) TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 129017369 DHX40; (RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 129045138 KIN; (RefSeq) DNA/RNA-binding protein KIN17 isoform X1 K13102 KIN; DNA/RNA-binding protein KIN17
D 129031126 METTL8; (RefSeq) tRNA N(3)-methylcytidine methyltransferase METTL8, mitochondrial isoform X1 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 129016158 METTL22; (RefSeq) methyltransferase-like protein 22 isoform X2 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 129026900 TENT5B; (RefSeq) terminal nucleotidyltransferase 5B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 129038740 TENT5A; (RefSeq) terminal nucleotidyltransferase 5A isoform X1 K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 129041619 TENT5C; (RefSeq) terminal nucleotidyltransferase 5C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 129024618 TENT5D; (RefSeq) terminal nucleotidyltransferase 5D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 129012238 ZC3H14; (RefSeq) zinc finger CCCH domain-containing protein 14 isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 129041127 SRRT; (RefSeq) serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 129015421 RBM8A; (RefSeq) RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 129012145 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 129017094 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 129036317 MAGOH; (RefSeq) protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 129018224 ALYREF; (RefSeq) THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 129038250 DDX39B; (RefSeq) spliceosome RNA helicase DDX39B isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 129017354 EIF4A3; (RefSeq) eukaryotic initiation factor 4A-III isoform X2 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 129033532 CCDC174; (RefSeq) coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 129018287 CASC3; (RefSeq) protein CASC3 K14323 CASC3; protein CASC3
E 129011284 SAP18; (RefSeq) histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 129032148 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 129013090 PNN; (RefSeq) pinin K13114 PNN; pinin
E 129012789 ACIN1; (RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 129015982 RNPS1; (RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 129043405 SRRM1; (RefSeq) serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 129018659 THOC1; (RefSeq) THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
E 129024264 THOC2; (RefSeq) THO complex subunit 2 isoform X4 K12879 THOC2; THO complex subunit 2
E 129036303 THOC3; (RefSeq) THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 129018224 ALYREF; (RefSeq) THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 129023486 THOC5; (RefSeq) THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 129015509 THOC6; (RefSeq) THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 129026926 THOC7; (RefSeq) THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
E 129035778 CHTOP; (RefSeq) chromatin target of PRMT1 protein isoform X1 K28424 CHTOP; chromatin target of PRMT1 protein
D TREX-2 complex
E 129011819 PCID2; (RefSeq) PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 129040768 SEM1; (RefSeq) 26S proteasome complex subunit SEM1 isoform X1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 129043172 ENY2; (RefSeq) transcription and mRNA export factor ENY2 isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 129024367 CETN2; (RefSeq) centrin-2 K10840 CETN2; centrin-2
E 129036985 CETN3; (RefSeq) centrin-3 K16466 CETN3; centrin-3
E 129022300 MCM3AP; (RefSeq) germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 129013989 TPR; (RefSeq) nucleoprotein TPR K09291 TPR; nucleoprotein TPR
E 129021490 RAE1; (RefSeq) mRNA export factor RAE1 K14298 RAE1; mRNA export factor
E 129033205 SEC13; (RefSeq) protein SEC13 homolog isoform X1 K14004 SEC13; protein transport protein SEC13
E 129010936 NUP37; (RefSeq) nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 129016718 NUP85; (RefSeq) nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 129038679 NUP43; (RefSeq) nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 129023223 NUP50; (RefSeq) nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 129035526 NUP54; (RefSeq) nucleoporin P54 K14308 NUP54; nuclear pore complex protein Nup54
E 129020474 NUP62; (RefSeq) nuclear pore glycoprotein P62 K14306 NUP62; nuclear pore complex protein Nup62
E 129018145 NUP88; (RefSeq) nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 129015308 NUP93; (RefSeq) nuclear pore complex protein Nup93 isoform X3 K14309 NUP93; nuclear pore complex protein Nup93
E 129008199 NUP98; (RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X3 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 129009947 NUP107; (RefSeq) nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 129010728 NUP133; (RefSeq) nuclear pore complex protein Nup133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133
E 129043894 NUP188; (RefSeq) nucleoporin NUP188 isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 129038010 NUP153; (RefSeq) nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 129036040 NUP155; (RefSeq) nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 129007997 NUP160; (RefSeq) nuclear pore complex protein Nup160 isoform X1 K14303 NUP160; nuclear pore complex protein Nup160
E 129032031 NUP35; (RefSeq) nucleoporin NUP35 isoform X1 K14313 NUP35; nuclear pore complex protein Nup53
E 129040016 NUP205; (RefSeq) nuclear pore complex protein Nup205 isoform X2 K14310 NUP205; nuclear pore complex protein Nup205
E 129018955 NUP210L; (RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 129032685 NUP210; (RefSeq) nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 129043561 NUP214; (RefSeq) nuclear pore complex protein Nup214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 129038043 POM121L2; (RefSeq) POM121-like protein 2 K14316 POM121; nuclear pore complex protein Nup121
E 129040029 POM121; (RefSeq) nuclear envelope pore membrane protein POM 121 K14316 POM121; nuclear pore complex protein Nup121
E 129041204 POM121C; (RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1 K14316 POM121; nuclear pore complex protein Nup121
E 129011260 NUP58; (RefSeq) nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 129040388 NUP42; (RefSeq) nucleoporin NUP42 isoform X1 K14321 NUPL2; nucleoporin-like protein 2
E 129036121 NDC1; (RefSeq) nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 129018627 SEH1L; (RefSeq) nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1
E 129021015 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129028448 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129028707 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129030225 E3 SUMO-protein ligase RanBP2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129030494 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129030762 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129030767 E3 SUMO-protein ligase RanBP2-like isoform X2 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129030865 E3 SUMO-protein ligase RanBP2-like isoform X3 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129030866 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 129034082 SENP2; (RefSeq) sentrin-specific protease 2 isoform X1 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 129009678 AAAS; (RefSeq) aladin isoform X1 K14320 AAAS; aladin
E 129036985 CETN3; (RefSeq) centrin-3 K16466 CETN3; centrin-3
E 129043878 GLE1; (RefSeq) mRNA export factor GLE1 K18723 GLE1; nucleoporin GLE1
E 129008316 NXF1; (RefSeq) nuclear RNA export factor 1 isoform X2 K14284 NXF; nuclear RNA export factor
E 129023802 nuclear RNA export factor 2-like isoform X1 K14284 NXF; nuclear RNA export factor
E 129024333 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 129024613 NXF3; (RefSeq) nuclear RNA export factor 3 isoform X1 K14284 NXF; nuclear RNA export factor
E 129025009 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 129021564 NXT1; (RefSeq) NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
E 129025177 NXT2; (RefSeq) NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
E 129013546 NPAP1; (RefSeq) nuclear pore-associated protein 1 K26564 NPAP1; nuclear pore-associated protein 1
D Ran-mediated transport factors
E 129010047 RAN; (RefSeq) GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 129035363 GTP-binding nuclear protein Ran-like K07936 RAN; GTP-binding nuclear protein Ran
E 129009704 ANP32D; (RefSeq) LOW QUALITY PROTEIN: acidic leucine-rich nuclear phosphoprotein 32 family member D K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 129014009 ANP32A; (RefSeq) acidic leucine-rich nuclear phosphoprotein 32 family member A K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 129014073 acidic leucine-rich nuclear phosphoprotein 32 family member A-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 129035036 LOW QUALITY PROTEIN: acidic leucine-rich nuclear phosphoprotein 32 family member A-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 129044723 ANP32B; (RefSeq) acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X2 K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 129018184 TNFSF13; (RefSeq) tumor necrosis factor ligand superfamily member 13 isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 129013043 LOW QUALITY PROTEIN: ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 129019493 ELAVL1; (RefSeq) ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 129020114 ELAVL3; (RefSeq) ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 129036897 ELAVL4; (RefSeq) ELAV-like protein 4 isoform X3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 129043771 ELAVL2; (RefSeq) ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 129036296 FAF2; (RefSeq) FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 129044646 VCP; (RefSeq) transitional endoplasmic reticulum ATPase isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
E 129012192 VCPKMT; (RefSeq) protein N-lysine methyltransferase METTL21D isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 129020171 TNPO2; (RefSeq) transportin-2 isoform X1 K18727 TNPO2; transportin-2
E 129027984 XPO1; (RefSeq) exportin-1 isoform X1 K14290 XPO1; exportin-1
E 129042275 XPO7; (RefSeq) exportin-7 K18460 XPO7; exportin-7
E 129036706 RANBP17; (RefSeq) ran-binding protein 17 isoform X1 K24115 RANBP17; Ran-binding protein 17
E 129023301 RANGAP1; (RefSeq) ran GTPase-activating protein 1 isoform X1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 129017145 TAF15; (RefSeq) TATA-binding protein-associated factor 2N isoform X1 K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 129031349 EIF4E2; (RefSeq) eukaryotic translation initiation factor 4E type 2 isoform X2 K03259 EIF4E; translation initiation factor 4E
E 129035177 EIF4E; (RefSeq) eukaryotic translation initiation factor 4E isoform X1 K03259 EIF4E; translation initiation factor 4E
E 129037205 EIF4E1B; (RefSeq) eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 129038430 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 129018181 EIF4A1; (RefSeq) eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 129024870 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 129032585 EIF4A2; (RefSeq) eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 129008188 EIF4G2; (RefSeq) eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 129033047 EIF4G1; (RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 129044645 EIF4G3; (RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 129009371 EIF4B; (RefSeq) eukaryotic translation initiation factor 4B isoform X2 K03258 EIF4B; translation initiation factor 4B
E 129019098 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 129040227 EIF4H; (RefSeq) eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 129042495 EIF4EBP1; (RefSeq) eukaryotic translation initiation factor 4E-binding protein 1 isoform X2 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 129006240 EIF4EBP2; (RefSeq) eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 129023560 EIF4ENIF1; (RefSeq) eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 129012465 ANGEL1; (RefSeq) protein angel homolog 1 isoform X1 K18729 ANGEL; protein angel
E 129036452 ANGEL2; (RefSeq) protein angel homolog 2 isoform X1 K18729 ANGEL; protein angel
E 129018179 FXR2; (RefSeq) RNA-binding protein FXR2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129024600 FMR1; (RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129033144 FXR1; (RefSeq) RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129037186 CYFIP2; (RefSeq) cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 134738349 CYFIP1; (RefSeq) cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 129037069 GEMIN5; (RefSeq) gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 129035831 TACC3; (RefSeq) transforming acidic coiled-coil-containing protein 3 isoform X1 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 129006503 CPEB3; (RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129014032 CPEB1; (RefSeq) cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129035513 CPEB2; (RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129036555 CPEB4; (RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129024297 DDX3X; (RefSeq) ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 129031351 GIGYF2; (RefSeq) GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 129041121 GIGYF1; (RefSeq) GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 129011429 PABPC3; (RefSeq) polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 129021428 PABPC1L; (RefSeq) polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 129025284 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 129025290 PABPC1L2B; (RefSeq) polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 129025317 PABPC5; (RefSeq) polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 129035485 PABPC4L; (RefSeq) polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 129039818 PABPC4; (RefSeq) polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 129043014 PABPC1; (RefSeq) polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 129036047 PAIP1; (RefSeq) polyadenylate-binding protein-interacting protein 1 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 129030545 PAIP2B; (RefSeq) polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 129037053 PAIP2; (RefSeq) polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 129039425 SKIC2; (RefSeq) superkiller complex protein 2 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 129007188 DEAF1; (RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X2 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 129021469 MCTS2; (RefSeq) malignant T-cell-amplified sequence 2 K07575 MCTS; malignant T-cell-amplified sequence
E 129024348 MCTS1; (RefSeq) malignant T-cell-amplified sequence 1 isoform X1 K07575 MCTS; malignant T-cell-amplified sequence
E 129009261 DENR; (RefSeq) density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 129010273 APOBEC1; (RefSeq) C->U-editing enzyme APOBEC-1 isoform X1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 129006599 A1CF; (RefSeq) APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 129009300 PYM1; (RefSeq) partner of Y14 and mago isoform X2 K14294 WIBG; partner of Y14 and mago
E 129006540 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129007392 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129008121 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129009377 HNRNPA1; (RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129011341 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129018279 heterogeneous nuclear ribonucleoprotein A1-like 3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129019999 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129031527 HNRNPA3; (RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129037030 heterogeneous nuclear ribonucleoprotein A1-like 3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129038057 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129040943 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129043072 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129010070 MSI1; (RefSeq) RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 129018404 MSI2; (RefSeq) RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 129020679 DAZAP1; (RefSeq) DAZ-associated protein 1 isoform X5 K14411 MSI; RNA-binding protein Musashi
E 129038197 HBS1L; (RefSeq) HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 129036327 PELO; (RefSeq) protein pelota homolog K06965 PELO; protein pelota
E 129012817 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 129015576 PABPN1L; (RefSeq) embryonic polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 129015752 DDX19A; (RefSeq) ATP-dependent RNA helicase DDX19A isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 129015754 ATP-dependent RNA helicase DDX19B isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 129007373 DDX25; (RefSeq) ATP-dependent RNA helicase DDX25 isoform X1 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 129019412 XAB2; (RefSeq) pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 129009296 SARNP; (RefSeq) SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein
E 129042303 RCC1; (RefSeq) regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation
E 129014267 LARP6; (RefSeq) la-related protein 6 isoform X1 K18733 LARP6; la-related protein 6
E 129036334 PURA; (RefSeq) transcriptional activator protein Pur-alpha isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha
E 129040004 PURB; (RefSeq) transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 129023347 POLDIP3; (RefSeq) polymerase delta-interacting protein 3 isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3
E 129031339 ZC3H11A; (RefSeq) zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 129019406 LENG8; (RefSeq) leukocyte receptor cluster member 8 isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
E 129014026 PATL2; (RefSeq) protein PAT1 homolog 2 isoform X1 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 129037043 ETF1; (RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 129015420 GSPT1; (RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 129025213 GSPT2; (RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3B K03267 ERF3; peptide chain release factor subunit 3
E 129020531 UPF1; (RefSeq) regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 129045204 UPF2; (RefSeq) regulator of nonsense transcripts 2 isoform X2 K14327 UPF2; regulator of nonsense transcripts 2
E 129011839 UPF3A; (RefSeq) regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 129024627 UPF3B; (RefSeq) regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 129036892 PPP2CA; (RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 129042223 PPP2CB; (RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit beta isoform isoform X1 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 129008919 PPP2R1B; (RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X2 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 129019445 PPP2R1A; (RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 129006103 PPP2R2D; (RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 129034916 PPP2R2C; (RefSeq) protein phosphatase 2, regulatory subunit B, gamma isoform X2 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 129037387 PPP2R2B; (RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 129042456 PPP2R2A; (RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 129012296 PPP2R3C; (RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 129024029 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 129032783 PPP2R3A; (RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 129007141 PPP2R5B; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 129012225 PPP2R5C; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X2 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 129013302 PPP2R5E; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 129031888 PPP2R5A; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 129034158 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 129039546 PPP2R5D; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 129015282 SMG1; (RefSeq) serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 129032459 SMG5; (RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1 K11125 SMG5; protein SMG5
E 129018272 SMG6; (RefSeq) telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 129009823 SMG7; (RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X4 K14409 SMG7; protein SMG7
E 129017386 SMG8; (RefSeq) nonsense-mediated mRNA decay factor SMG8 K18734 SMG8; protein SMG8
E 129019922 SMG9; (RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1 K18735 SMG9; protein SMG9
E 129031351 GIGYF2; (RefSeq) GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 129041121 GIGYF1; (RefSeq) GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 129014144 SECISBP2L; (RefSeq) selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 129044340 SECISBP2; (RefSeq) selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 129019843 DHX34; (RefSeq) probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 129023728 GTPBP1; (RefSeq) GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 129043439 PUM3; (RefSeq) pumilio homolog 3 isoform X1 K14844 PUF6; pumilio homology domain family member 6
E 129013782 MYO5A; (RefSeq) unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 129013945 MYO5C; (RefSeq) unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 129018812 MYO5B; (RefSeq) unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 129009516 BICD1; (RefSeq) protein bicaudal D homolog 1 isoform X2 K18739 BICD; protein bicaudal D
E 129044619 BICD2; (RefSeq) protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 129013709 EXD1; (RefSeq) piRNA biogenesis protein EXD1 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 129006835 LOW QUALITY PROTEIN: actin-like K05692 ACTB_G1; actin beta/gamma 1
E 129018371 ACTG1; (RefSeq) actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 129041019 ACTB; (RefSeq) actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 129018625 MBP; (RefSeq) myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 129006170 VIM; (RefSeq) vimentin K07606 VIM; vimentin
E 129015319 MT1X; (RefSeq) metallothionein-1X isoform X2 K14739 MT1_2; metallothionein 1/2
E 129015320 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 129015321 metallothionein-1F-like isoform X2 K14739 MT1_2; metallothionein 1/2
E 129015322 metallothionein-1F K14739 MT1_2; metallothionein 1/2
E 129015323 metallothionein-1H K14739 MT1_2; metallothionein 1/2
E 129015324 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 129015326 metallothionein-1E K14739 MT1_2; metallothionein 1/2
E 129016089 metallothionein-2 K14739 MT1_2; metallothionein 1/2
E 129020165 LOW QUALITY PROTEIN: metallothionein-1E K14739 MT1_2; metallothionein 1/2
E 129036967 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 129044016 MT1HL1; (RefSeq) metallothionein 1H-like protein 1 K14739 MT1_2; metallothionein 1/2
E 129044110 metallothionein-1B-like K14739 MT1_2; metallothionein 1/2
E 134739302 metallothionein-2-like K14739 MT1_2; metallothionein 1/2
E 129042796 MYC; (RefSeq) myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 129020533 GDF1; (RefSeq) embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 129015853 TBX6; (RefSeq) T-box transcription factor TBX6 isoform X1 K10180 TBX6; T-box protein 6
E 129006079 NANOS1; (RefSeq) nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 129021714 ZBP1; (RefSeq) Z-DNA-binding protein 1 isoform X1 K12965 ZBP1; Z-DNA binding protein 1
E 129020771 KHSRP; (RefSeq) far upstream element-binding protein 2 isoform X1 K13210 FUBP; far upstream element-binding protein
E 129032526 FUBP1; (RefSeq) far upstream element-binding protein 1 isoform X5 K13210 FUBP; far upstream element-binding protein
E 129043786 FUBP3; (RefSeq) far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 129021883 EEF1A2; (RefSeq) elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 129023831 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 129030698 LOW QUALITY PROTEIN: elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 129037851 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 129039312 EEF1A1; (RefSeq) elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 129042925 LOW QUALITY PROTEIN: putative elongation factor 1-alpha-like 3 K03231 EEF1A; elongation factor 1-alpha
E 129008222 EEF1G; (RefSeq) elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 129041420 HNRNPA2B1; (RefSeq) heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 129018864 HAX1; (RefSeq) HCLS1-associated protein X-1 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 129031298 AGFG1; (RefSeq) arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 129021675 STAU1; (RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X5 K17597 STAU; double-stranded RNA-binding protein Staufen
E 129042190 STAU2; (RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 129040383 IGF2BP3; (RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 129026067 PTBP1; (RefSeq) polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 129006503 CPEB3; (RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129014032 CPEB1; (RefSeq) cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129035513 CPEB2; (RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129036555 CPEB4; (RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 129018179 FXR2; (RefSeq) RNA-binding protein FXR2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129024600 FMR1; (RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129033144 FXR1; (RefSeq) RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129037186 CYFIP2; (RefSeq) cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 134738349 CYFIP1; (RefSeq) cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 129010925 PCBP2; (RefSeq) poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 129022286 PCBP3; (RefSeq) poly(rC)-binding protein 3 isoform X2 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 129034124 PCBP4; (RefSeq) poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 129008472 CAPRIN1; (RefSeq) caprin-1 isoform X2 K18743 CAPRIN1; caprin-1
E 129009498 CAPRIN2; (RefSeq) caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 129015589 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 129038782 YBX1; (RefSeq) Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 129032812 XRN1; (RefSeq) 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 129041015 AGO3; (RefSeq) protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 129041027 AGO1; (RefSeq) protein argonaute-1 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 129041041 protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 129043156 AGO2; (RefSeq) protein argonaute-2 isoform X4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 129031349 EIF4E2; (RefSeq) eukaryotic translation initiation factor 4E type 2 isoform X2 K03259 EIF4E; translation initiation factor 4E
E 129035177 EIF4E; (RefSeq) eukaryotic translation initiation factor 4E isoform X1 K03259 EIF4E; translation initiation factor 4E
E 129037205 EIF4E1B; (RefSeq) eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 129038430 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 129020531 UPF1; (RefSeq) regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 129024297 DDX3X; (RefSeq) ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 129025985 DDX3Y; (RefSeq) ATP-dependent RNA helicase DDX3Y K17642 DDX3Y; ATP-dependent RNA helicase DDX3Y [EC:5.6.2.7]
E 129007075 DDX6; (RefSeq) probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 129014335 MEX3B; (RefSeq) RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 129018948 MEX3C; (RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 129020692 MEX3D; (RefSeq) RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 129023068 MEX3A; (RefSeq) RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 129040250 FASTK; (RefSeq) fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 129019710 LSM14A; (RefSeq) protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 129021985 LSM14B; (RefSeq) protein LSM14 homolog B isoform X1 K18749 LSM14; protein LSM14
E 129025687 PCBP1; (RefSeq) poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 129010925 PCBP2; (RefSeq) poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 129015589 Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 129038782 YBX1; (RefSeq) Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
E 129012797 AJUBA; (RefSeq) LIM domain-containing protein ajuba isoform X1 K16682 AJUBA; LIM domain-containing protein
E 129019724 WTIP; (RefSeq) Wilms tumor protein 1-interacting protein K16682 AJUBA; LIM domain-containing protein
E 129032710 LIMD1; (RefSeq) LIM domain-containing protein 1 isoform X1 K16682 AJUBA; LIM domain-containing protein
E 129010273 APOBEC1; (RefSeq) C->U-editing enzyme APOBEC-1 isoform X1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 129023577 APOBEC3A; (RefSeq) DNA dC->dU-editing enzyme APOBEC-3A K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 129023578 DNA dC->dU-editing enzyme APOBEC-3F isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 129023579 APOBEC3B; (RefSeq) DNA dC->dU-editing enzyme APOBEC-3B K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 129023580 DNA dC->dU-editing enzyme APOBEC-3C K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 129023582 APOBEC3G; (RefSeq) DNA dC->dU-editing enzyme APOBEC-3G isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 129023583 APOBEC3H; (RefSeq) DNA dC->dU-editing enzyme APOBEC-3H isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 129020912 MOV10; (RefSeq) helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 129043687 PNRC2; (RefSeq) proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 129017525 LOW QUALITY PROTEIN: transportin-1-like K18752 TNPO1; transportin-1
E 129037593 TNPO1; (RefSeq) transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 129015282 SMG1; (RefSeq) serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 129032459 SMG5; (RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1 K11125 SMG5; protein SMG5
E 129018272 SMG6; (RefSeq) telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 129009823 SMG7; (RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X4 K14409 SMG7; protein SMG7
E 129019651 ZFP36; (RefSeq) mRNA decay activator protein ZFP36 K15308 TTP; tristetraprolin
E 129012144 ZFP36L1; (RefSeq) mRNA decay activator protein ZFP36L1 K18753 ZFP36L; butyrate response factor
E 129030173 ZFP36L2; (RefSeq) mRNA decay activator protein ZFP36L2 K18753 ZFP36L; butyrate response factor
E 129031582 protein lin-28 homolog A-like K18754 LIN28; protein lin-28
E 129038636 LIN28B; (RefSeq) protein lin-28 homolog B isoform X1 K18754 LIN28; protein lin-28
E 129039004 protein lin-28 homolog A-like K18754 LIN28; protein lin-28
E 129042792 LIN28A; (RefSeq) protein lin-28 homolog A K18754 LIN28; protein lin-28
E 129035784 HTT; (RefSeq) huntingtin isoform X1 K04533 HD; huntingtin
E 129009496 IPO8; (RefSeq) importin-8 isoform X1 K18755 IPO8; importin-8
E 129045122 BICC1; (RefSeq) protein bicaudal C homolog 1 isoform X1 K18756 BICC1; protein bicaudal C
E 129006540 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129007392 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129008121 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129009377 HNRNPA1; (RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129011341 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129018279 heterogeneous nuclear ribonucleoprotein A1-like 3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129019999 heterogeneous nuclear ribonucleoprotein A3-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129031527 HNRNPA3; (RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129037030 heterogeneous nuclear ribonucleoprotein A1-like 3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129038057 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129040943 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129043072 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 129019356 PRKACA; (RefSeq) cAMP-dependent protein kinase catalytic subunit alpha isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 129034992 PRKACB; (RefSeq) cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 129044040 PRKACG; (RefSeq) cAMP-dependent protein kinase catalytic subunit gamma K04345 PKA; protein kinase A [EC:2.7.11.11]
E 129035049 LARP1B; (RefSeq) la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1
E 129036297 LARP1; (RefSeq) la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 129009350 ATXN2; (RefSeq) ataxin-2 isoform X3 K23625 ATXN2_2L; ataxin 2/2L
E 129015826 ATXN2L; (RefSeq) ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 129036982 DCP2; (RefSeq) m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 129034251 DCP1A; (RefSeq) mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 129009981 DCP1B; (RefSeq) mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 129042500 LSM1; (RefSeq) U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 129038952 LSM2; (RefSeq) U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 129032535 LSM3; (RefSeq) U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 129020651 LSM4; (RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 129040935 LSM5; (RefSeq) U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 129035682 LSM6; (RefSeq) U6 snRNA-associated Sm-like protein LSm6 isoform X3 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 129020726 LSM7; (RefSeq) U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 129040230 LSM8; (RefSeq) LSM8 homolog, U6 small nuclear RNA associated isoform X2 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 129008388 KLC2; (RefSeq) kinesin light chain 2 K10407 KLC; kinesin light chain
E 129013051 KLC1; (RefSeq) kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 129019984 KLC3; (RefSeq) kinesin light chain 3 isoform X1 K10407 KLC; kinesin light chain
E 129039552 KLC4; (RefSeq) kinesin light chain 4 K10407 KLC; kinesin light chain
E 129013782 MYO5A; (RefSeq) unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 129013945 MYO5C; (RefSeq) unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 129018812 MYO5B; (RefSeq) unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 129009401 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 129009402 TUBA1A; (RefSeq) tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 129009403 tubulin alpha-1C chain K07374 TUBA; tubulin alpha
E 129011855 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 129022341 tubulin alpha-3 chain isoform X1 K07374 TUBA; tubulin alpha
E 129023451 TUBA8; (RefSeq) tubulin alpha-8 chain isoform X1 K07374 TUBA; tubulin alpha
E 129031836 tubulin alpha-4A chain isoform X1 K07374 TUBA; tubulin alpha
E 129032082 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 129044528 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 129045191 TUBAL3; (RefSeq) tubulin alpha chain-like 3 K07374 TUBA; tubulin alpha
E 134737991 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 129006503 CPEB3; (RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129014032 CPEB1; (RefSeq) cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129035513 CPEB2; (RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129036555 CPEB4; (RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 129037069 GEMIN5; (RefSeq) gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 129035831 TACC3; (RefSeq) transforming acidic coiled-coil-containing protein 3 isoform X1 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 129015700 TNRC6A; (RefSeq) trinucleotide repeat-containing gene 6A protein isoform X2 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 129016887 TNRC6C; (RefSeq) trinucleotide repeat-containing gene 6C protein isoform X2 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 129023086 TNRC6B; (RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 129016135 CNOT1; (RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 129010578 CNOT2; (RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 129019268 CNOT3; (RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 129040014 CNOT4; (RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 129034975 CNOT6L; (RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 129036060 CNOT6; (RefSeq) CCR4-NOT transcription complex subunit 6 isoform X3 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 129036299 CNOT8; (RefSeq) CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 129043083 CNOT7; (RefSeq) CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 129019719 GARRE1; (RefSeq) granule associated Rac and RHOG effector protein 1 isoform X1 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 129031338 DIS3L2; (RefSeq) DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 129010794 PAN2; (RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 129011491 PAN3; (RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 129008914 BTG4; (RefSeq) protein BTG4 isoform X1 K14443 TOB; protein Tob/BTG
E 129010183 BTG1; (RefSeq) protein BTG1 K14443 TOB; protein Tob/BTG
E 129017048 BTG2; (RefSeq) protein BTG2 K14443 TOB; protein Tob/BTG
E 129018383 TOB1; (RefSeq) protein Tob1 K14443 TOB; protein Tob/BTG
E 129022440 BTG3; (RefSeq) protein BTG3 K14443 TOB; protein Tob/BTG
E 129023305 TOB2; (RefSeq) protein Tob2 K14443 TOB; protein Tob/BTG
E 129023560 EIF4ENIF1; (RefSeq) eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 129007383 PATL1; (RefSeq) protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 129013678 EDC3; (RefSeq) enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 129015641 EDC4; (RefSeq) enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 129021154 NANOS2; (RefSeq) nanos homolog 2 K18760 NANOS2; protein nanos 2
E 129019346 NANOS3; (RefSeq) nanos homolog 3 K18761 NANOS3; protein nanos 3
E 129045204 UPF2; (RefSeq) regulator of nonsense transcripts 2 isoform X2 K14327 UPF2; regulator of nonsense transcripts 2
E 129011839 UPF3A; (RefSeq) regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 129024627 UPF3B; (RefSeq) regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 129008500 TRIM21; (RefSeq) E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 129033168 TRIM71; (RefSeq) E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 129008325 POLR2G; (RefSeq) DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 129025668 EIF2AK2; (RefSeq) interferon-induced, double-stranded RNA-activated protein kinase K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 129011655 ZAR1L; (RefSeq) protein ZAR1-like K18762 ZAR1; zygote arrest protein 1
E 129035855 ZAR1; (RefSeq) zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 129012327 LOW QUALITY PROTEIN: YTH domain-containing family protein 2-like K20102 YTHDF; YTH domain-containing family protein
E 129021672 YTHDF1; (RefSeq) YTH domain-containing family protein 1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 129042229 YTHDF2; (RefSeq) YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
E 129042510 YTHDF3; (RefSeq) YTH domain-containing family protein 3 isoform X2 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 129006086 TIAL1; (RefSeq) nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 129030163 TIA1; (RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X3 K13201 TIA1; nucleolysin TIA-1/TIAR
E 129011429 PABPC3; (RefSeq) polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 129021428 PABPC1L; (RefSeq) polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 129025284 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 129025290 PABPC1L2B; (RefSeq) polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 129025317 PABPC5; (RefSeq) polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 129035485 PABPC4L; (RefSeq) polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 129039818 PABPC4; (RefSeq) polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 129043014 PABPC1; (RefSeq) polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 129021675 STAU1; (RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X5 K17597 STAU; double-stranded RNA-binding protein Staufen
E 129042190 STAU2; (RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 129018179 FXR2; (RefSeq) RNA-binding protein FXR2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129024600 FMR1; (RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129033144 FXR1; (RefSeq) RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 129021714 ZBP1; (RefSeq) Z-DNA-binding protein 1 isoform X1 K12965 ZBP1; Z-DNA binding protein 1
E 129013043 LOW QUALITY PROTEIN: ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 129019493 ELAVL1; (RefSeq) ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 129036412 G3BP1; (RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 129035430 G3BP2; (RefSeq) ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 129032658 EIF2A; (RefSeq) eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 129040261 EIF3B; (RefSeq) eukaryotic translation initiation factor 3 subunit B isoform X1 K03253 EIF3B; translation initiation factor 3 subunit B
E 129018181 EIF4A1; (RefSeq) eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 129024870 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 129032585 EIF4A2; (RefSeq) eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 129017354 EIF4A3; (RefSeq) eukaryotic initiation factor 4A-III isoform X2 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 129009371 EIF4B; (RefSeq) eukaryotic translation initiation factor 4B isoform X2 K03258 EIF4B; translation initiation factor 4B
E 129019098 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 129008188 EIF4G2; (RefSeq) eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 129033047 EIF4G1; (RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 129044645 EIF4G3; (RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 129024468 RPS6KA3; (RefSeq) ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 129024970 RPS6KA6; (RefSeq) ribosomal protein S6 kinase alpha-6 isoform X2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 129038298 RPS6KA2; (RefSeq) ribosomal protein S6 kinase alpha-2 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 129042740 RPS6KA1; (RefSeq) ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 129036490 RACK1; (RefSeq) small ribosomal subunit protein RACK1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 129044456 TRAF2; (RefSeq) TNF receptor-associated factor 2 isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 129008316 NXF1; (RefSeq) nuclear RNA export factor 1 isoform X2 K14284 NXF; nuclear RNA export factor
E 129023802 nuclear RNA export factor 2-like isoform X1 K14284 NXF; nuclear RNA export factor
E 129024333 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 129024613 NXF3; (RefSeq) nuclear RNA export factor 3 isoform X1 K14284 NXF; nuclear RNA export factor
E 129025009 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 129024299 HDAC6; (RefSeq) histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 129011285 TDRD3; (RefSeq) tudor domain-containing protein 3 isoform X6 K18404 TDRD3; tudor domain-containing protein 3
E 129009596 LARP4; (RefSeq) la-related protein 4 isoform X2 K18763 LARP4; la-related protein 4
E 129045197 LARP4B; (RefSeq) la-related protein 4B K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 129034251 DCP1A; (RefSeq) mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 129009981 DCP1B; (RefSeq) mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 129036982 DCP2; (RefSeq) m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 129007075 DDX6; (RefSeq) probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 129013678 EDC3; (RefSeq) enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 129015641 EDC4; (RefSeq) enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 129007383 PATL1; (RefSeq) protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 129042500 LSM1; (RefSeq) U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 129038952 LSM2; (RefSeq) U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 129032535 LSM3; (RefSeq) U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 129020651 LSM4; (RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 129040935 LSM5; (RefSeq) U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 129035682 LSM6; (RefSeq) U6 snRNA-associated Sm-like protein LSm6 isoform X3 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 129020726 LSM7; (RefSeq) U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 129040230 LSM8; (RefSeq) LSM8 homolog, U6 small nuclear RNA associated isoform X2 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 129032812 XRN1; (RefSeq) 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 129021510 XRN2; (RefSeq) 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 129033983 U8 snoRNA-decapping enzyme isoform X1 K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
E 129033984 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 129008976 DCPS; (RefSeq) m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 129018211 HELZ; (RefSeq) probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 129006116 EXOSC1; (RefSeq) exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 129044065 EXOSC2; (RefSeq) exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 129043583 EXOSC3; (RefSeq) exosome complex component RRP40 isoform X1 K03681 RRP40; exosome complex component RRP40
E 129042763 EXOSC4; (RefSeq) exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 129019733 EXOSC5; (RefSeq) exosome complex component RRP46 isoform X1 K12590 RRP46; exosome complex component RRP46
E 129015757 EXOSC6; (RefSeq) exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 129032489 EXOSC7; (RefSeq) exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
E 129011472 EXOSC8; (RefSeq) exosome complex component RRP43 isoform X1 K12586 RRP43; exosome complex component RRP43
E 129034945 EXOSC9; (RefSeq) exosome complex component RRP45 isoform X1 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 129011788 DIS3; (RefSeq) exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 129014425 DIS3L; (RefSeq) DIS3-like exonuclease 1 isoform X3 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 129008008 EXOSC10; (RefSeq) exosome complex component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 129006522 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1
E 129026796 C1D; (RefSeq) nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 129015395 MPHOSPH6; (RefSeq) M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 129035074 DDX60L; (RefSeq) probable ATP-dependent RNA helicase DDX60-like K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 129035415 DDX60; (RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X2 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 129015311 TENT4B; (RefSeq) terminal nucleotidyltransferase 4B isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 129036736 TENT4A; (RefSeq) terminal nucleotidyltransferase 4A isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 129043589 ZCCHC7; (RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1 K12597 AIR1_2; protein AIR1/2
E 129036596 MTREX; (RefSeq) exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 129039425 SKIC2; (RefSeq) superkiller complex protein 2 isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 129036619 SKIC3; (RefSeq) superkiller complex protein 3 K12600 SKI3; superkiller protein 3
E 129013994 SKIC8; (RefSeq) superkiller complex protein 8 isoform X1 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 129034975 CNOT6L; (RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 129036060 CNOT6; (RefSeq) CCR4-NOT transcription complex subunit 6 isoform X3 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 129016135 CNOT1; (RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 129010578 CNOT2; (RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 129019268 CNOT3; (RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 129040014 CNOT4; (RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 129036299 CNOT8; (RefSeq) CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 129043083 CNOT7; (RefSeq) CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 129031805 CNOT9; (RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 129033169 CNOT10; (RefSeq) CCR4-NOT transcription complex subunit 10 isoform X5 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 129010794 PAN2; (RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 129011491 PAN3; (RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 129016062 PARN; (RefSeq) poly(A)-specific ribonuclease PARN isoform X2 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 129038838 PNLDC1; (RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 129032549 DHX36; (RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X2 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 129008914 BTG4; (RefSeq) protein BTG4 isoform X1 K14443 TOB; protein Tob/BTG
E 129010183 BTG1; (RefSeq) protein BTG1 K14443 TOB; protein Tob/BTG
E 129017048 BTG2; (RefSeq) protein BTG2 K14443 TOB; protein Tob/BTG
E 129018383 TOB1; (RefSeq) protein Tob1 K14443 TOB; protein Tob/BTG
E 129022440 BTG3; (RefSeq) protein BTG3 K14443 TOB; protein Tob/BTG
E 129023305 TOB2; (RefSeq) protein Tob2 K14443 TOB; protein Tob/BTG
E 129037392 CSF2; (RefSeq) granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 129034702 NOCT; (RefSeq) nocturnin isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 129042321 ERI1; (RefSeq) 3'-5' exoribonuclease 1 isoform X1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 129015435 ERI2; (RefSeq) ERI1 exoribonuclease 2 isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 129008976 DCPS; (RefSeq) m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 129032465 PDE12; (RefSeq) 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 129013996 IREB2; (RefSeq) iron-responsive element-binding protein 2 isoform X1 K22416 IREB2; iron-responsive element-binding protein 2
E 129018211 HELZ; (RefSeq) probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 129021711 HELZ2; (RefSeq) 3'-5' exoribonuclease HELZ2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 129013329 NRDE2; (RefSeq) nuclear exosome regulator NRDE2 K26109 NRDE2; nuclear exosome regulator NRDE2
E 129013300 SAMD4A; (RefSeq) protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 129019649 SAMD4B; (RefSeq) protein Smaug homolog 2 isoform X1 K27396 SMG; protein Smaug
E 129043919 FOCAD; (RefSeq) focadhesin isoform X2 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 129012716 non-secretory ribonuclease K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 129012928 RNASE1; (RefSeq) ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 129012943 eosinophil cationic protein-like K10787 RNASE3; eosinophil cationic protein [EC:3.1.27.-]
E 129012944 RNASE4; (RefSeq) ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 134738129 seminal ribonuclease-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 129012927 RNASE6; (RefSeq) ribonuclease K6 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 129013287 ribonuclease 7 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 129013288 RNASE8; (RefSeq) ribonuclease 8 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 129012889 RNASE11; (RefSeq) probable ribonuclease 11 isoform X1 K16633 RNASE11; ribonuclease 11 [EC:3.1.27.-]
E 129007104 ZC3H12C; (RefSeq) probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 129024474 ZC3H12B; (RefSeq) probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 129038673 ZC3H12D; (RefSeq) probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 129040824 ZC3H12A; (RefSeq) endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 129036649 DROSHA; (RefSeq) ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 129007311 REXO2; (RefSeq) oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 129008525 ENO1; (RefSeq) alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 129010360 ENO2; (RefSeq) gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 129018128 ENO3; (RefSeq) beta-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 129027206 PNPT1; (RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 129006799 PFKP; (RefSeq) ATP-dependent 6-phosphofructokinase, platelet type isoform X2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 129009697 PFKM; (RefSeq) ATP-dependent 6-phosphofructokinase, muscle type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 129022282 PFKL; (RefSeq) ATP-dependent 6-phosphofructokinase, liver type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 129031509 LOW QUALITY PROTEIN: stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 129037042 HSPA9; (RefSeq) stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 129031738 HSPD1; (RefSeq) 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 129044065 EXOSC2; (RefSeq) exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 129006116 EXOSC1; (RefSeq) exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 129042763 EXOSC4; (RefSeq) exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 129032489 EXOSC7; (RefSeq) exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 27, 2025