+D GENES KO
#
KEGG Orthology (KO) - Cutibacterium avidum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pra00010]
D PALO_07210 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PALO_00430 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_09915 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PALO_10155 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PALO_05490 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_00945 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PALO_06805 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PALO_06815 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PALO_06810 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PALO_08745 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_06840 phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_08555 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_08070 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PALO_06975 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PALO_00745 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PALO_06100 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PALO_07345 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_09835 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PALO_01470 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PALO_01465 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PALO_06620 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01220 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01225 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_05640 oxidoreductase, zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PALO_05980 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_00485 polyphosphate glucokinase/transcriptional regulator K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PALO_00725 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D PALO_10255 family 4 glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PALO_09080 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_07385 PTS system N-acetylglucosamine-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_09075 PTS system glucose-specific transporter subunits IICB K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:pra00020]
D PALO_03980 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PALO_10935 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PALO_05685 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PALO_02270 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PALO_04650 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_01470 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PALO_01465 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PALO_02190 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PALO_02185 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PALO_00720 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PALO_06315 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_03915 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_06310 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_03920 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_06320 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_03910 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_10845 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PALO_06100 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PALO_07345 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PALO_09835 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pra00030]
D PALO_00430 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PALO_03170 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PALO_03160 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D PALO_03365 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PALO_03025 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PALO_04970 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PALO_10705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PALO_10675 putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PALO_03065 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PALO_00765 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PALO_08230 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PALO_10465 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PALO_08215 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_08125 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PALO_00420 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PALO_08710 KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PALO_07125 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D PALO_06645 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PALO_08715 carbohydrate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_00945 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_09915 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PALO_10155 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PALO_05490 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pra00040]
D PALO_10645 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PALO_07775 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PALO_08300 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PALO_06660 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PALO_06655 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PALO_00350 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PALO_06650 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PALO_04970 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PALO_00355 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D PALO_10700 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D PALO_07680 oxidoreductase, zinc-binding dehydrogenase family protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:pra00051]
D PALO_10975 PfkB domain-containing protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PALO_08420 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PALO_10505 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PALO_02350 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PALO_02465 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_09915 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PALO_10155 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PALO_05490 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PALO_07680 oxidoreductase, zinc-binding dehydrogenase family protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_00945 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PALO_06805 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PALO_10675 putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PALO_03065 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PALO_11160 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D PALO_09920 ATP synthase F0 subunit A K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PALO_08785 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
C 00052 Galactose metabolism [PATH:pra00052]
D PALO_05980 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PALO_10870 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PALO_11325 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PALO_10215 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PALO_08300 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_07210 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PALO_02445 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PALO_08740 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PALO_08735 PTS system lactose/cellobiose specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PALO_08780 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_09915 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PALO_10155 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PALO_03020 alpha-glucosidase/amylase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pra00053]
D PALO_07775 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PALO_06660 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D PALO_06655 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D PALO_00350 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PALO_06650 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:pra00500]
D PALO_03020 alpha-glucosidase/amylase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PALO_06565 alpha amylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D PALO_08300 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PALO_06090 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PALO_10255 family 4 glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D PALO_07610 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D PALO_05380 1,4-alpha-glucan-branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PALO_11360 Family 13 glycosyl hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PALO_10170 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PALO_05360 glycogen operon protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D PALO_05370 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D PALO_07780 neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D PALO_02530 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PALO_05375 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D PALO_05365 putative glucanase GlgE K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D PALO_07615 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PALO_09080 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_07385 PTS system N-acetylglucosamine-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_09550 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D PALO_09555 Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D PALO_06250 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D PALO_06245 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D PALO_05395 trehalose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_07210 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PALO_00430 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PALO_10975 PfkB domain-containing protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pra00520]
D PALO_02750 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PALO_10230 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PALO_09080 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_07385 PTS system N-acetylglucosamine-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_07405 phosphotransferase system, EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PALO_08335 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D PALO_08375 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PALO_10975 PfkB domain-containing protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PALO_02000 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PALO_01980 phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PALO_08130 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PALO_06450 UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D PALO_05235 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PALO_07810 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D PALO_04855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PALO_01550 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PALO_09070 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PALO_01010 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D PALO_09890 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PALO_09960 bacterial transferase hexapeptide repeat protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PALO_00315 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PALO_10755 Alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PALO_09075 PTS system glucose-specific transporter subunits IICB K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PALO_07210 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PALO_00485 polyphosphate glucokinase/transcriptional regulator K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_08300 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PALO_07775 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PALO_10870 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PALO_11325 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PALO_10215 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PALO_00430 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PALO_08420 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PALO_10505 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PALO_02350 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PALO_02465 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PALO_07610 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:pra00620]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PALO_09835 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PALO_01470 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PALO_01465 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PALO_06100 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PALO_07345 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_05640 oxidoreductase, zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PALO_06975 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PALO_02370 acetyl/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PALO_00720 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PALO_06620 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01220 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01225 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_03585 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D PALO_06935 oxidoreductase, putative D-lactate dehydrogenase K18930 dld; D-lactate dehydrogenase
D PALO_05130 metallo-beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PALO_09000 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PALO_06615 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PALO_10845 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PALO_10610 hypothetical protein K20370 PEPCK; phosphoenolpyruvate carboxykinase (diphosphate) [EC:4.1.1.38]
D PALO_00745 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PALO_06365 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pra00630]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PALO_03980 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PALO_10935 citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PALO_05685 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PALO_05425 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PALO_02370 acetyl/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PALO_02415 propionyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PALO_07735 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_07740 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_10120 catalase K03781 katE; catalase [EC:1.11.1.6]
D PALO_11045 D-isomer specific 2-hydroxyacid dehydrogenase, D-3-phosphoglycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D PALO_07425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_07465 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_08720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PALO_07110 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PALO_07100 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_07105 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PALO_05580 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PALO_10810 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PALO_00420 putative aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PALO_08710 KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PALO_04650 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PALO_02265 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pra00640]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PALO_00605 pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PALO_00610 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PALO_00615 biotin-requiring enzyme K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_02370 acetyl/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PALO_00960 oxaloacetate decarboxylase K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1]
D PALO_00965 methylmalonyl-CoA carboxyltransferase 12S subunit K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D PALO_00970 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1]
D PALO_00975 Biotin carboxyl carrier protein of methylmalonyl-CoA:Pyruvate transcarboxylase K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1]
D PALO_02415 propionyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PALO_05425 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PALO_07735 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_07740 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_02185 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PALO_02190 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PALO_06620 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01220 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01225 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:pra00650]
D PALO_06315 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_03915 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_06310 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_03920 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_06320 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_03910 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_10180 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PALO_00720 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D PALO_09835 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PALO_01470 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PALO_01465 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PALO_04205 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PALO_04210 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pra00660]
D PALO_04205 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PALO_04210 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PALO_02185 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PALO_02190 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PALO_04255 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PALO_04260 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PALO_04225 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pra00562]
D PALO_05605 CDP-alcohol phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D PALO_06805 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pra00190]
D PALO_01315 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PALO_01320 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PALO_01480 NADH ubiquinone oxidoreductase, 20 Kd subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PALO_01485 respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PALO_01325 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PALO_09145 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PALO_01330 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PALO_01335 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PALO_01340 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PALO_01345 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D PALO_01350 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PALO_01490 4Fe-4S binding protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PALO_01355 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PALO_01360 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PALO_01365 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PALO_01370 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PALO_01375 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PALO_01380 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PALO_09870 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PALO_06315 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_03915 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_06310 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_03920 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_06320 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_03910 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_07270 Tat (twin-arginine translocation) pathway signal sequence K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D PALO_07275 cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D PALO_07265 putative menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D PALO_03175 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PALO_07295 hypothetical protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D PALO_07260 putative cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PALO_07300 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PALO_07305 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PALO_03185 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_07570 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_09770 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PALO_09775 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PALO_04740 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PALO_04750 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PALO_04745 ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PALO_04735 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PALO_04755 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PALO_04720 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PALO_04730 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PALO_04725 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PALO_09235 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PALO_08845 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PALO_05030 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pra00710]
D PALO_06810 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PALO_06815 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_00945 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PALO_10705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PALO_10675 putative ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PALO_03065 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PALO_06805 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PALO_04970 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PALO_00745 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pra00720]
D PALO_09835 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PALO_00745 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PALO_10845 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PALO_06315 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_03915 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PALO_06310 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_03920 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PALO_06320 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_03910 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PALO_02190 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PALO_02185 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PALO_01470 pyruvate:ferredoxin oxidoreductase (alpha subunit) K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PALO_01465 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PALO_02270 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PALO_05685 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D PALO_11370 MaoC-like protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D PALO_05425 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PALO_07735 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_07740 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_10350 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PALO_02245 methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PALO_07155 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pra00680]
D PALO_08720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PALO_08070 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_00945 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_09915 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PALO_10155 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PALO_08745 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_06840 phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_08555 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_04585 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PALO_08340 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PALO_00730 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pra00910]
D PALO_10145 hypothetical protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D PALO_06675 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D PALO_04440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PALO_03420 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PALO_07425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_07465 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_05265 NADH-dependent glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PALO_05260 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PALO_00460 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PALO_07820 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PALO_05800 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:pra00920]
D PALO_00950 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PALO_02135 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PALO_06230 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PALO_04895 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PALO_08685 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pra00061]
D PALO_02370 acetyl/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PALO_06135 acyl carrier protein K02078 acpP; acyl carrier protein
D PALO_06125 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PALO_06130 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PALO_06140 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PALO_03010 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_11140 long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pra00071]
D PALO_03010 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_11140 long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_09935 reductase, ferredoxin K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pra00561]
D PALO_10810 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PALO_05640 oxidoreductase, zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PALO_01250 hypothetical protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D PALO_01245 dihydroxyacetone kinase subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D PALO_01240 PTS protein, putative dihydroxyacetone kinase phosphotransfer protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PALO_10785 glycerol kinase 2 K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PALO_04085 HAD hydrolase, family IIA K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D PALO_07200 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_11125 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_03595 glycosyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_04265 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_04185 Diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PALO_00585 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:pra00564]
D PALO_10715 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PALO_11050 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D PALO_11055 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D PALO_11060 glpC; sn-glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D PALO_07200 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_11125 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_03595 glycosyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_04265 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_04185 Diacylglycerol kinase catalytic region K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PALO_04865 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PALO_11345 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PALO_03400 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PALO_06020 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PALO_02155 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PALO_05600 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D PALO_10695 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pra00600]
D PALO_02445 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PALO_10230 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D PALO_05895 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pra00230]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_08125 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PALO_01170 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PALO_01030 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PALO_02220 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PALO_01135 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PALO_01055 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PALO_01060 phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PALO_01175 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PALO_02435 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PALO_02440 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PALO_01035 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PALO_02225 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PALO_05150 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PALO_00590 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PALO_01210 HAD hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PALO_02355 putative purine nucleotide phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PALO_07010 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PALO_00695 inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D PALO_09220 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PALO_02120 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PALO_02125 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PALO_06780 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PALO_02580 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PALO_02140 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PALO_07285 inosine 5-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D PALO_05010 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PALO_05925 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PALO_00505 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PALO_00500 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PALO_00400 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PALO_06275 putative dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D PALO_05140 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PALO_08045 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PALO_01025 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PALO_10930 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D PALO_01650 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PALO_01830 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PALO_05610 HIT family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D PALO_00460 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PALO_07820 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pra00240]
D PALO_06055 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PALO_06060 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PALO_06070 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PALO_06065 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PALO_06045 dihydroorotate dehydrogenase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PALO_06050 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PALO_09840 dihydroorotate dehydrogenase 2 K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D PALO_06035 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PALO_06040 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PALO_03390 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PALO_06780 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PALO_02405 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PALO_04120 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PALO_04915 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PALO_02340 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PALO_00590 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PALO_01210 HAD hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PALO_11375 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PALO_06075 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PALO_01650 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PALO_02310 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PALO_00400 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PALO_05925 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PALO_00505 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PALO_00500 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PALO_01235 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PALO_09350 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PALO_05750 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PALO_04235 pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D PALO_05775 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PALO_02585 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PALO_00060 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pra00250]
D PALO_06300 L-aspartate oxidase (LASPO) (Quinolinate synthetase B) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PALO_08730 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PALO_00530 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PALO_10925 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PALO_10135 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PALO_11290 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PALO_04340 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PALO_01025 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PALO_01035 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PALO_06070 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PALO_10180 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PALO_05265 NADH-dependent glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PALO_05260 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PALO_04440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PALO_03420 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PALO_07425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_07465 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_06055 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PALO_06060 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PALO_01060 phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PALO_02000 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PALO_01170 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pra00260]
D PALO_00150 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PALO_08975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PALO_04665 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PALO_04675 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PALO_04670 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PALO_08720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PALO_10810 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PALO_08745 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_06840 phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_08555 phosphoglycerate mutase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_04585 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PALO_08340 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PALO_00730 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PALO_08605 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PALO_08610 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D PALO_09275 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PALO_07110 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PALO_07100 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_07105 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PALO_05580 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PALO_08635 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PALO_08915 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PALO_05275 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PALO_05280 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pra00270]
D PALO_02135 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PALO_06230 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PALO_11410 Aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PALO_04960 Methionine synthase (5-methyltetrahydrofolate:L-homocysteine S-methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PALO_03760 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PALO_04995 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PALO_05540 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PALO_05475 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PALO_07010 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PALO_08425 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PALO_00150 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PALO_08975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PALO_04665 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PALO_04895 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PALO_08685 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PALO_04230 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PALO_00950 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PALO_06620 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01220 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01225 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_02260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PALO_08635 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PALO_04585 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PALO_08340 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pra00280]
D PALO_04230 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PALO_00605 pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PALO_00610 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PALO_00615 biotin-requiring enzyme K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_02370 acetyl/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D PALO_02415 propionyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D PALO_05425 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PALO_07735 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_07740 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_10445 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pra00290]
D PALO_08915 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D PALO_04255 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PALO_04260 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PALO_04225 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PALO_04205 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PALO_04210 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PALO_04215 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PALO_08910 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PALO_04230 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PALO_06365 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pra00300]
D PALO_04665 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PALO_00150 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PALO_08975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PALO_07600 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PALO_01005 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PALO_03575 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PALO_07635 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PALO_04335 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PALO_07630 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PALO_05955 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PALO_04660 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PALO_10600 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PALO_07055 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PALO_07050 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:pra00310]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_10180 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:pra00220]
D PALO_00455 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PALO_07825 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PALO_11290 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PALO_04340 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PALO_07830 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PALO_02395 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PALO_01060 phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PALO_07425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_07465 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_06055 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PALO_06060 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PALO_00460 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PALO_07820 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D PALO_04440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D PALO_03420 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PALO_04325 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D PALO_04330 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PALO_04320 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PALO_04335 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:pra00330]
D PALO_09275 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PALO_08970 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PALO_08985 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D PALO_06730 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PALO_06725 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PALO_06400 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:pra00340]
D PALO_04015 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PALO_04010 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D PALO_05305 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D PALO_05190 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D PALO_05195 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PALO_04195 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PALO_05200 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D PALO_10425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_05205 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_04590 putative inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D PALO_05210 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PALO_00045 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PALO_00065 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PALO_00050 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PALO_09275 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:pra00350]
D PALO_10425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_05205 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_09275 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PALO_10180 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D PALO_06855 hypothetical protein K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
C 00360 Phenylalanine metabolism [PATH:pra00360]
D PALO_09275 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PALO_10425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_05205 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_03265 NADH oxidase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
D PALO_03240 dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D PALO_09935 reductase, ferredoxin K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:pra00380]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_09275 putative flavin-containing amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D PALO_10120 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pra00400]
D PALO_07190 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PALO_05050 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PALO_02515 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PALO_05055 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PALO_04605 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PALO_05060 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PALO_05300 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PALO_07250 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PALO_05190 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D PALO_05285 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PALO_05275 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PALO_05280 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PALO_02130 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D PALO_04920 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PALO_11245 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PALO_10425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_05205 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D PALO_00060 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:pra00430]
D PALO_10925 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PALO_04440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:pra00450]
D PALO_08685 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PALO_11410 Aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PALO_04960 Methionine synthase (5-methyltetrahydrofolate:L-homocysteine S-methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PALO_03250 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PALO_10745 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PALO_02325 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pra00460]
D PALO_06090 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PALO_08730 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PALO_00530 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PALO_08720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pra00470]
D PALO_10880 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PALO_04270 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_10595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_01060 phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PALO_02570 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PALO_07040 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PALO_05955 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PALO_04660 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PALO_10895 hypothetical protein K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5]
C 00480 Glutathione metabolism [PATH:pra00480]
D PALO_09115 LamB/YcsF family protein, putative K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D PALO_07340 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PALO_03040 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PALO_01125 membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PALO_02270 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PALO_03025 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PALO_03170 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:pra00515]
D PALO_08165 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:pra00514]
D PALO_08165 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pra00511]
D PALO_02445 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PALO_10230 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PALO_10250 glycosyl hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PALO_03805 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PALO_05855 beta-mannosidase B K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:pra00542]
D PALO_04705 glycosyltransferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pra00541]
D PALO_08300 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PALO_10215 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PALO_07775 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PALO_09650 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_10865 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_09660 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PALO_09665 dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D PALO_08420 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PALO_10505 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PALO_02350 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PALO_02465 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PALO_08130 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PALO_09890 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PALO_09960 bacterial transferase hexapeptide repeat protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:pra00550]
D PALO_04855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PALO_01550 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PALO_07025 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PALO_07040 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PALO_07055 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PALO_04270 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_10595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_07050 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PALO_11210 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PALO_07045 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PALO_07030 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PALO_07060 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PALO_09720 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D PALO_09230 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PALO_02725 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D PALO_02720 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:pra00552]
D PALO_11210 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PALO_04705 glycosyltransferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PALO_11335 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PALO_01560 Putative LytR family regulatory protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pra00543]
D PALO_04705 glycosyltransferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PALO_02135 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PALO_02455 succinoglycan biosynthesis protein ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pra00730]
D PALO_10070 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PALO_05355 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PALO_05675 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PALO_06630 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PALO_10060 hydroxyethylthiazole kinase, sugar kinase family protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PALO_06625 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PALO_10055 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PALO_04280 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PALO_04600 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PALO_01830 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pra00740]
D PALO_02210 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PALO_02200 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PALO_02215 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PALO_02205 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PALO_10240 putative hydrolase K20884 FHY; riboflavin kinase / FMN hydrolase [EC:2.7.1.26 3.1.3.102]
D PALO_03560 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PALO_06630 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PALO_10060 hydroxyethylthiazole kinase, sugar kinase family protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
C 00750 Vitamin B6 metabolism [PATH:pra00750]
D PALO_04860 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PALO_02385 bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PALO_08005 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PALO_08340 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PALO_04670 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PALO_06220 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PALO_06215 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pra00760]
D PALO_06300 L-aspartate oxidase (LASPO) (Quinolinate synthetase B) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PALO_06295 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PALO_06305 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PALO_02540 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PALO_02355 putative purine nucleotide phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PALO_00590 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PALO_01210 HAD hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D PALO_06715 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PALO_04485 NUDIX family hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PALO_10970 nadE; NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PALO_06015 competence/damage-inducible protein CinA C-terminal domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PALO_04110 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D PALO_07660 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D PALO_07655 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D PALO_10180 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:pra00770]
D PALO_04205 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PALO_04210 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PALO_04215 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PALO_08910 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PALO_06120 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PALO_01990 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PALO_05000 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PALO_03795 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PALO_06885 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PALO_02025 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D PALO_04230 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PALO_00060 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:pra00780]
D PALO_06140 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PALO_01675 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PALO_06210 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PALO_06205 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PALO_04055 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D PALO_02420 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pra00785]
D PALO_07350 lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PALO_07365 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_06100 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D PALO_07345 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PALO_04650 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D PALO_00605 pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D PALO_00610 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D PALO_00615 biotin-requiring enzyme K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D PALO_07110 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PALO_07100 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PALO_07105 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PALO_05580 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pra00790]
D PALO_09205 GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PALO_09165 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PALO_09160 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PALO_09170 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PALO_02590 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PALO_06790 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PALO_02210 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PALO_09730 para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D PALO_01140 aminodeoxychorismate synthase, component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D PALO_11000 aminotransferase, class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D PALO_08270 MoeA N-terminal region (domain I and II) K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:pra00670]
D PALO_02590 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PALO_10350 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PALO_02245 methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PALO_08720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PALO_02220 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PALO_02225 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PALO_04985 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PALO_07100 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PALO_04960 Methionine synthase (5-methyltetrahydrofolate:L-homocysteine S-methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PALO_02585 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PALO_02265 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PALO_07155 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PALO_08275 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pra00860]
D PALO_04155 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_01660 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_09025 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PALO_09055 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PALO_09050 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PALO_09040 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PALO_09045 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PALO_09030 uroporphyrinogen decarboxylase, HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PALO_09035 putative protoporphyrinogen oxidase, HemY K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PALO_00600 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PALO_09020 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PALO_08955 uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D PALO_08450 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D PALO_00595 molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D PALO_03175 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PALO_03185 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_07570 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_08505 sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PALO_08520 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D PALO_08510 tetrapyrrole methylase, CbiE/G/H fusion protein K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D PALO_08515 tetrapyrrole methylase, putative precorrin-3 methylase, CbiF K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D PALO_01390 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D PALO_08445 cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D PALO_08465 precorrin-6Y C5,15-methyltransferase subunit CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PALO_08495 Cobalt-precorrin-8x methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D PALO_08455 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PALO_10095 cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D PALO_04765 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PALO_08460 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PALO_08525 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PALO_08530 Cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PALO_08435 putative cobalamin-5-phosphate synthase, CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PALO_06285 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PALO_08440 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PALO_10100 cobaltochelatase subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D PALO_10105 magnesium chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pra00130]
D PALO_01290 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PALO_06540 isochorismate synthetase, enterochelin biosynthesis K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PALO_01305 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PALO_06550 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit B K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PALO_06555 putative O-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PALO_06535 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PALO_06530 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PALO_01260 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pra00900]
D PALO_05675 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PALO_03430 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PALO_08795 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PALO_08145 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PALO_08790 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PALO_03445 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PALO_07915 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PALO_00525 putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PALO_07160 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PALO_07950 di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PALO_10705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pra00523]
D PALO_09650 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_10865 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_09660 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PALO_09665 dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PALO_06540 isochorismate synthetase, enterochelin biosynthesis K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D PALO_01305 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D PALO_09660 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pra00946]
D PALO_06090 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PALO_09245 putative acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:pra00332]
D PALO_06730 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PALO_06725 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pra00261]
D PALO_00150 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PALO_08975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PALO_07600 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PALO_01005 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PALO_03575 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pra00521]
D PALO_07210 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PALO_05410 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PALO_09650 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_10865 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_09660 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PALO_09665 dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PALO_07210 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pra00525]
D PALO_09650 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_10865 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PALO_09660 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pra00401]
D PALO_04920 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PALO_10425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_05205 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PALO_05300 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PALO_06125 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PALO_06135 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pra00999]
D PALO_03760 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PALO_04995 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PALO_05540 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PALO_06090 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pra00362]
D PALO_02685 adenylosuccinate lyase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D PALO_09935 reductase, ferredoxin K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pra03020]
D PALO_01595 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PALO_01600 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PALO_01875 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PALO_05005 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D PALO_08390 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pra03010]
D PALO_06925 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PALO_03380 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PALO_01715 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PALO_01870 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PALO_01775 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PALO_11175 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PALO_01630 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PALO_01760 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PALO_01975 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PALO_01680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PALO_01865 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PALO_01625 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PALO_01860 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PALO_00085 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PALO_01755 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PALO_03565 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PALO_03890 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PALO_01730 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PALO_11185 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PALO_01705 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PALO_06570 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PALO_01580 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PALO_01700 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PALO_01685 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PALO_01690 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PALO_01750 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PALO_01765 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PALO_01590 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PALO_11190 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PALO_01585 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PALO_01575 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PALO_01970 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PALO_01740 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PALO_01785 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PALO_01720 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PALO_01880 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PALO_01770 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PALO_03925 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PALO_04035 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PALO_06760 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PALO_01710 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PALO_01695 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PALO_01745 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PALO_08120 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PALO_06755 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PALO_00090 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PALO_03775 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PALO_01725 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PALO_01780 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PALO_00095 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PALO_04685 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PALO_00080 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PALO_03840 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PALO_01535 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PALO_10535 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PALO_04030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PALO_00470 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PALO_01855 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PALO_r11575 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11579 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11577 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11581 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11585 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11583 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11569 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11571 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11573 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pra00970]
D PALO_t11537 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11539 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11547 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11557 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11549 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11521 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11535 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PALO_t11485 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PALO_t11529 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PALO_t11513 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PALO_t11545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PALO_t11515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PALO_t11487 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PALO_t11527 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PALO_t11509 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PALO_t11481 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PALO_t11503 tRNA-His K14226 tRNA-His; tRNA His
D PALO_t11559 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PALO_t11499 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11543 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11541 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11479 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11511 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11501 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PALO_t11489 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PALO_t11533 tRNA-Met K14230 tRNA-Met; tRNA Met
D PALO_t11519 tRNA-Met K14230 tRNA-Met; tRNA Met
D PALO_t11495 tRNA-Met K14230 tRNA-Met; tRNA Met
D PALO_t11483 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PALO_t11477 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PALO_t11507 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PALO_t11523 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PALO_t11561 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11555 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11567 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11563 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11553 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PALO_t11551 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PALO_t11493 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PALO_t11497 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PALO_t11491 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PALO_t11517 tRNA-Val K14237 tRNA-Val; tRNA Val
D PALO_t11531 tRNA-Val K14237 tRNA-Val; tRNA Val
D PALO_t11525 tRNA-Val K14237 tRNA-Val; tRNA Val
D PALO_04155 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_01660 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_05320 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PALO_05315 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PALO_05325 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PALO_01655 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PALO_05080 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PALO_05095 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PALO_06325 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PALO_05615 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PALO_11255 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PALO_08700 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PALO_02325 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PALO_04985 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PALO_03140 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PALO_06595 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PALO_09470 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PALO_03085 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PALO_09745 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PALO_00450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PALO_03480 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PALO_05125 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PALO_04045 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PALO_04050 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PALO_04070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PALO_04450 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pra03060]
D PALO_01825 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PALO_01565 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PALO_06800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PALO_05160 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PALO_05155 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PALO_05165 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PALO_10550 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PALO_04420 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PALO_03880 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PALO_03870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PALO_00190 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PALO_04175 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PALO_07595 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PALO_04180 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D PALO_03930 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PALO_06985 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pra04122]
D PALO_05355 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PALO_00950 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D PALO_05350 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome [PATH:pra03050]
D PALO_04925 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PALO_04930 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pra03018]
D PALO_06765 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PALO_08070 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PALO_03570 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PALO_06455 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PALO_04680 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PALO_05985 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PALO_03600 Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_00790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PALO_08410 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_02105 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_08845 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PALO_05030 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PALO_10800 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pra03030]
D PALO_02330 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_07220 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_05220 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PALO_09530 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PALO_09345 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PALO_06575 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PALO_10525 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PALO_11090 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PALO_06265 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PALO_02990 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_11180 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02315 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PALO_03935 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PALO_06945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PALO_03055 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pra03410]
D PALO_09440 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PALO_07985 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PALO_09060 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PALO_11065 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PALO_03850 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PALO_03075 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PALO_04770 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PALO_01525 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PALO_11135 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PALO_06945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PALO_03055 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pra03420]
D PALO_08105 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PALO_06850 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PALO_06875 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PALO_06835 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PALO_04480 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_04505 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_02180 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_06945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PALO_03055 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PALO_08390 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:pra03430]
D PALO_04480 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_04505 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_02180 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_07925 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PALO_07930 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PALO_02990 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_11180 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_05220 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PALO_10525 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PALO_09530 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PALO_06575 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PALO_09345 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PALO_02330 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_07220 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_03055 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:pra03440]
D PALO_02990 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_11180 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_10515 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D PALO_06350 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PALO_09520 recombination protein RecR K06187 recR; recombination protein RecR
D PALO_05995 protein RecA K03553 recA; recombination protein RecA
D PALO_06945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PALO_05175 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PALO_05170 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PALO_05180 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PALO_03780 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PALO_04495 putative exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PALO_04500 putative exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PALO_04490 exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PALO_05220 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PALO_10525 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PALO_09530 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PALO_06575 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PALO_09345 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PALO_02330 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_07220 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_04990 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:pra03250]
D PALO_07230 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pra02010]
D PALO_03555 transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PALO_03550 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D PALO_03545 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PALO_08585 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein
D PALO_08590 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PALO_08580 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PALO_08640 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PALO_03220 putative periplasmic maltose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PALO_03215 maltose transport system permease MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PALO_03210 type IV conjugative transfer system protein TraL K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PALO_02715 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PALO_02710 binding-protein-dependent transport system inner membrane protein K10237 thuF; trehalose/maltose transport system permease protein
D PALO_02705 ABC transporter permease YurM K10238 thuG; trehalose/maltose transport system permease protein
D PALO_10265 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D PALO_10270 ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D PALO_10275 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D PALO_03830 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D PALO_03825 ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D PALO_03820 binding-protein-dependent transport system inner membrane protein K17246 chiG; putative chitobiose transport system permease protein
D PALO_02290 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PALO_02300 ABC transporter associated permease K23535 nupB; general nucleoside transport system permease protein
D PALO_02305 ABC transporter associated permease K23536 nupC; general nucleoside transport system permease protein
D PALO_02295 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PALO_01190 extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PALO_01195 ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D PALO_01200 ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D PALO_10470 D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D PALO_10475 ribose ABC transport system, permease protein RbsC/ribose ABC transport system, periplasmic ribose-binding protein RbsB K10440 rbsC; ribose transport system permease protein
D PALO_10480 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PALO_10460 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D PALO_00905 Extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PALO_00895 sn-glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PALO_00900 Binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PALO_08855 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PALO_08860 phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D PALO_08865 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PALO_08870 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PALO_10435 Amino acid ABC transporter, amino acid-binding/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D PALO_10430 Polar amino acid ABC transporter, ATP-binding subunit K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PALO_02170 outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PALO_02160 transporter K02072 metI; D-methionine transport system permease protein
D PALO_02165 methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D PALO_00125 family 5 extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PALO_00120 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PALO_00115 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PALO_00110 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PALO_00105 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PALO_01810 family 5 extracellular solute-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PALO_01805 family 5 extracellular solute-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PALO_01790 binding-protein-dependent transport system inner membrane protein K13890 gsiC; glutathione transport system permease protein
D PALO_01795 binding-protein-dependent transport system inner membrane protein K13891 gsiD; glutathione transport system permease protein
D PALO_01800 Oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter K13892 gsiA; glutathione transport system ATP-binding protein
D PALO_01515 iron ABC transporter K11601 mntC; manganese transport system substrate-binding protein
D PALO_01505 metal ion ABC transporter membrane protein K11602 mntB; manganese transport system permease protein
D PALO_01510 Mn/Zn ABC type transporter ATPase K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PALO_11235 hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PALO_11225 ABC transporter K11708 troC; manganese/zinc/iron transport system permease protein
D PALO_11220 ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein
D PALO_11230 manganese transport system ATP-binding protein MntA K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PALO_08485 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D PALO_08490 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D PALO_08480 cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D PALO_08475 membrane associated cobalt transport protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PALO_04090 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D PALO_04100 cobalt permease-related transporter K16783 bioN; biotin transport system permease protein
D PALO_04095 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PALO_01935 ABC transporter-associated permease K16785 ecfT; energy-coupling factor transport system permease protein
D PALO_00645 ABC transporter associated permease (putative cobalt transport system) K16785 ecfT; energy-coupling factor transport system permease protein
D PALO_05630 ABC-type antimicrobial peptide transport system, permease component K09813 hrtB; hemin transport system permease protein
D PALO_05635 ABC transporter K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D PALO_04310 efflux ABC transporter permease K09811 ftsX; cell division transport system permease protein
D PALO_04305 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PALO_00660 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D PALO_00665 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D PALO_09755 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PALO_09760 Lipid A export ATP-binding/permease MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PALO_09785 thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PALO_09780 thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PALO_08250 drug resistance ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:pra02060]
D PALO_08805 putative phosphoenolpyruvate-protein kinase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PALO_08800 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D PALO_09925 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PALO_09080 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_07385 PTS system N-acetylglucosamine-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_09075 PTS system glucose-specific transporter subunits IICB K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PALO_07405 phosphotransferase system, EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PALO_05390 phosphoenolpyruvate sugar phosphotransferase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PALO_08785 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PALO_08740 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PALO_08735 PTS system lactose/cellobiose specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PALO_08780 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PALO_09920 ATP synthase F0 subunit A K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PALO_11160 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:pra03070]
D PALO_05160 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PALO_05155 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PALO_01565 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PALO_06800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PALO_01825 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PALO_05165 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PALO_10550 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PALO_04420 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PALO_03870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PALO_03880 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PALO_04175 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PALO_07595 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PALO_04180 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D PALO_02940 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pra02020]
D PALO_08760 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PALO_08765 sensory transduction protein RegX K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PALO_08855 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PALO_10025 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PALO_10020 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PALO_10040 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D PALO_10035 K+-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D PALO_10030 K+-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D PALO_03185 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_07570 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_00545 signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PALO_00550 response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D PALO_10770 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PALO_04400 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D PALO_04395 transcriptional regulatory protein, C-terminal domain protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D PALO_10530 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PALO_01515 iron ABC transporter K11601 mntC; manganese transport system substrate-binding protein
D PALO_01510 Mn/Zn ABC type transporter ATPase K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PALO_01505 metal ion ABC transporter membrane protein K11602 mntB; manganese transport system permease protein
D PALO_01395 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D PALO_09000 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PALO_06615 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D PALO_08540 Histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PALO_08535 Response regulator receiver domain-containing protein K07693 desR; two-component system, NarL family, response regulator DesR
D PALO_09405 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PALO_10395 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PALO_09400 hypothetical protein K12510 tadB; tight adherence protein B
D PALO_10385 type II secretion system F domain protein K12511 tadC; tight adherence protein C
D PALO_09270 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PALO_07425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_07465 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_09445 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PALO_09770 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PALO_09775 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PALO_00560 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PALO_09890 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pra02024]
D PALO_08425 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PALO_05300 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PALO_07190 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PALO_10020 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PALO_03010 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_11140 long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_09445 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PALO_02200 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PALO_00125 family 5 extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PALO_00120 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PALO_00115 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PALO_00110 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PALO_00105 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PALO_04560 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PALO_04565 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PALO_07510 ABC-type transporter, permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PALO_04570 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PALO_04575 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PALO_07495 ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PALO_04580 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PALO_10550 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PALO_07725 peptidase families S8 and S53 K14645 K14645; serine protease [EC:3.4.21.-]
D PALO_01565 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PALO_06800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PALO_01825 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PALO_05165 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PALO_04420 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PALO_03870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PALO_03880 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D PALO_10470 D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
D PALO_05860 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PALO_08070 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pra04980]
D PALO_04765 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PALO_07730 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D PALO_07735 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_07740 methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PALO_04960 Methionine synthase (5-methyltetrahydrofolate:L-homocysteine S-methyltransferase) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pra01501]
D PALO_02750 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PALO_00125 family 5 extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PALO_00120 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PALO_00115 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PALO_00110 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PALO_00105 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PALO_07060 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pra01502]
D PALO_04270 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_10595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_10880 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PALO_07050 UDP-N-acetylmuramyl pentapeptide synthase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PALO_07045 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PALO_07030 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D PALO_07230 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pra01000]
C 01001 Protein kinases [BR:pra01001]
D PALO_09725 kinase domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PALO_07175 kinase domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PALO_10790 serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PALO_02755 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PALO_09640 protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D PALO_07770 capsular exopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D PALO_08760 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PALO_10025 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PALO_00545 signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PALO_04400 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D PALO_00770 Sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PALO_08540 Histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PALO_04630 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pra01009]
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_09710 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PALO_04470 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PALO_00730 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pra01002]
D PALO_06985 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PALO_09185 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PALO_02070 Peptidase C1-like family protein K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PALO_02140 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PALO_07215 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PALO_01205 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PALO_01170 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PALO_05265 NADH-dependent glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PALO_02000 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PALO_00130 general stress protein 18 K05520 yhbO; deglycase [EC:3.5.1.124]
D PALO_04245 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D PALO_08405 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D PALO_03040 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PALO_01125 membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PALO_01440 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PALO_10005 peptidase, M16 (pitrilysin) family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PALO_10010 M16 family peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D PALO_07340 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PALO_07630 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PALO_03100 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PALO_02890 metalloendopeptidase-like membrane protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PALO_07490 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PALO_01835 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PALO_07565 peptidase, M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PALO_09215 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PALO_02975 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D PALO_10770 trypsin-like serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D PALO_11170 peptidase S8 and S53 subtilisin kexin sedolisin K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D PALO_07725 peptidase families S8 and S53 K14645 K14645; serine protease [EC:3.4.21.-]
D PALO_01845 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PALO_09230 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PALO_03115 ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PALO_03120 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PALO_04530 protease K07177 K07177; Lon-like protease
D PALO_05940 LexA DNA binding domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D PALO_03930 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PALO_06400 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PALO_03135 tricorn protease K08676 tri; tricorn protease [EC:3.4.21.-]
D PALO_02425 peptidase family S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D PALO_04925 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PALO_04930 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PALO_00530 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
C 01003 Glycosyltransferases [BR:pra01003]
D PALO_04875 glycosyltransferase, group 2 family protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PALO_08165 dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D PALO_01885 group 1 glycosyl transferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PALO_02035 glycosyltransferase, group 1 family protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D PALO_07615 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D PALO_04705 glycosyltransferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PALO_07380 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D PALO_02115 putative transporter K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D PALO_02455 succinoglycan biosynthesis protein ExoA K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D PALO_06250 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pra01005]
D PALO_04705 glycosyltransferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pra01011]
D PALO_04855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PALO_01550 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PALO_07025 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PALO_07040 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PALO_07055 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PALO_04270 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_10595 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PALO_10880 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PALO_02570 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PALO_07045 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PALO_07030 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PALO_11210 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PALO_00155 membrane protein, MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D PALO_07060 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PALO_09720 penicillin-binding protein, transpeptidase domain protein K05364 pbpA; penicillin-binding protein A
D PALO_09230 putative carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PALO_02890 metalloendopeptidase-like membrane protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D PALO_07215 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PALO_01205 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PALO_05070 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PALO_11420 lipoprotein A-like protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:pra01004]
D PALO_06125 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PALO_06130 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PALO_06140 putative beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PALO_05895 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D PALO_03315 enoyl-(acyl carrier protein) reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D PALO_06515 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PALO_03010 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_11140 long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_07200 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_11125 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_03595 glycosyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PALO_04265 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pra01006]
D PALO_07160 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PALO_07950 di-trans,poly-cis-decaprenylcistransferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D PALO_05960 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PALO_01260 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PALO_03175 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:pra01007]
D PALO_04155 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_01660 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_01655 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PALO_04070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PALO_04450 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PALO_08700 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PALO_00450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PALO_02325 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PALO_09470 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PALO_03140 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PALO_06595 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PALO_03085 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PALO_09745 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PALO_05095 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PALO_05125 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PALO_06325 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PALO_11255 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PALO_03480 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PALO_05615 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PALO_05080 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PALO_04045 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PALO_04050 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PALO_10425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_05205 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PALO_08605 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PALO_01675 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PALO_11410 Aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PALO_04335 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PALO_06210 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PALO_09055 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PALO_04230 putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PALO_08340 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:pra00199]
D PALO_03180 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:pra00194]
D PALO_04755 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PALO_04750 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PALO_04745 ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PALO_04740 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PALO_04735 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PALO_04730 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PALO_04725 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PALO_04720 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pra03000]
D PALO_01040 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PALO_06005 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D PALO_09910 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D PALO_10485 transcriptional regulator, LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PALO_10640 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PALO_03205 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PALO_00335 Transcriptional regulator, LacI family protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PALO_07400 putative histidine utilization repressor K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PALO_10455 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PALO_01015 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PALO_09820 regulatory protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D PALO_06225 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D PALO_04060 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D PALO_04885 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PALO_08235 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PALO_00805 merR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D PALO_06330 transcriptional regulator, Fur family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PALO_09445 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PALO_00200 Toxin-antitoxin system, antitoxin component, ArsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PALO_11075 HTH-type transcriptional repressor CzrA K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D PALO_06010 DNA-binding protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D PALO_00700 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D PALO_08330 iron dependent repressor, DNA binding domain-containing protein K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D PALO_01500 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PALO_02420 putative BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PALO_04375 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D PALO_09085 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D PALO_09460 putative regulatory protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PALO_02475 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PALO_04635 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D PALO_11100 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D PALO_10580 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PALO_02880 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PALO_08775 CarD-like protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D PALO_07815 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PALO_04065 arginine repressor domain-containing protein K03402 argR; transcriptional regulator of arginine metabolism
D PALO_06475 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D PALO_02145 hypothetical protein K03973 pspC; phage shock protein C
D PALO_10710 hypothetical protein K05346 deoR; deoxyribonucleoside regulator
D PALO_08210 transcriptional regulator deoR family protein K05346 deoR; deoxyribonucleoside regulator
D PALO_10775 hypothetical protein K05346 deoR; deoxyribonucleoside regulator
D PALO_06075 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PALO_04390 hypothetical protein K07735 algH; putative transcriptional regulator
D PALO_06990 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D PALO_05930 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D PALO_07075 hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pra03021]
D PALO_08390 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PALO_01875 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PALO_01595 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PALO_01600 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PALO_05005 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PALO_05860 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PALO_04615 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PALO_03505 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PALO_05020 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PALO_01570 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PALO_06990 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D PALO_07970 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PALO_04680 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pra03019]
D PALO_06765 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PALO_03845 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PALO_03600 Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PALO_05985 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PALO_07170 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D PALO_02965 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PALO_06455 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PALO_08070 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PALO_03570 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PALO_04680 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PALO_10965 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PALO_00790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PALO_08410 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_02105 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_08845 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PALO_05030 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D PALO_10800 tRNA adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PALO_06830 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D PALO_04190 helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D PALO_05905 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D PALO_09860 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:pra03011]
D PALO_06925 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PALO_03380 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PALO_01715 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PALO_01870 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PALO_01775 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PALO_11175 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PALO_01630 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PALO_01760 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PALO_01975 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PALO_01680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PALO_01865 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PALO_01625 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PALO_01860 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PALO_00085 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PALO_01755 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PALO_03565 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PALO_03890 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PALO_01730 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PALO_11185 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PALO_01705 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PALO_06570 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PALO_01580 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PALO_01700 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PALO_01685 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PALO_01690 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PALO_01750 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PALO_01765 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PALO_11190 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PALO_01585 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PALO_01575 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PALO_01590 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PALO_01970 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PALO_01740 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PALO_01785 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PALO_01720 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PALO_01880 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PALO_01770 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PALO_03925 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PALO_04035 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PALO_06760 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PALO_01710 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PALO_01695 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PALO_01745 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PALO_06755 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PALO_00090 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PALO_03775 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PALO_01725 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PALO_01780 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PALO_00095 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PALO_04685 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PALO_00080 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PALO_03840 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PALO_01535 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PALO_10535 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PALO_04030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PALO_00470 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PALO_01855 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PALO_08120 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D PALO_r11569 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11571 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11573 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11575 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11579 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11577 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11581 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11585 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11583 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pra03009]
D PALO_03845 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PALO_02965 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D PALO_06375 era; GTPase Era K03595 era; GTPase
D PALO_06735 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D PALO_06990 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D PALO_03505 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PALO_05020 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PALO_01570 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PALO_08150 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PALO_04980 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PALO_00735 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PALO_01940 methyltransferase small domain-containing protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D PALO_03790 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PALO_06465 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PALO_10570 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PALO_07070 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PALO_08160 S-adenosylmethionine-dependent methyltransferase, YraL family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PALO_04105 putative cytotoxin/hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PALO_03295 methyltransferase domain protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PALO_08705 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PALO_03415 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PALO_10740 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PALO_04145 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PALO_06980 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PALO_02060 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PALO_02795 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PALO_08265 putative ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D PALO_03900 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PALO_06025 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PALO_06765 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D PALO_05075 RNAse YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PALO_04600 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PALO_04910 ribosome-associated GTPase EngA K03977 engA; GTPase
D PALO_05950 GTP-binding protein HflX K03665 hflX; GTPase
D PALO_04700 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PALO_05140 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PALO_03535 hypothetical protein K02834 rbfA; ribosome-binding factor A
D PALO_03500 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D PALO_07720 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D PALO_06710 hypothetical protein K09710 ybeB; ribosome-associated protein
D PALO_06385 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D PALO_07900 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D PALO_03835 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pra03016]
D PALO_07170 guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D PALO_04155 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_01660 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_03480 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PALO_09470 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PALO_06595 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PALO_02325 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PALO_01655 glutaminyl-tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PALO_00450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PALO_03085 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PALO_09745 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PALO_05095 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PALO_05080 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PALO_06325 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PALO_05615 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PALO_11255 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PALO_08700 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PALO_03140 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PALO_05125 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PALO_04045 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PALO_04050 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PALO_04070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PALO_04450 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PALO_08830 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PALO_04200 histidine triad domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PALO_04955 methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D PALO_01950 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PALO_01945 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PALO_03540 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PALO_05355 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PALO_04700 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PALO_05960 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PALO_10540 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PALO_02575 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D PALO_05670 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5]
D PALO_10995 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PALO_11385 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PALO_05970 tRNA-I(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PALO_03905 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PALO_04040 tRNA/rRNA methyltransferase YsgA K03437 spoU; RNA methyltransferase, TrmH family
D PALO_10740 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PALO_05350 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PALO_08820 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D PALO_06430 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PALO_09225 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PALO_02055 peptidase, family M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PALO_02065 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PALO_02050 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PALO_03570 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pra03012]
D PALO_03515 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PALO_04025 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PALO_03385 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PALO_01640 translation elongation factor Tu K02358 tuf; elongation factor Tu
D PALO_01635 translation elongation factor G K02355 fusA; elongation factor G
D PALO_04690 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PALO_03395 ribosome recycling factor K02838 frr; ribosome recycling factor
D PALO_04695 protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PALO_08115 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PALO_01850 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PALO_05025 elongation factor P K02356 efp; elongation factor P
D PALO_04300 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PALO_04800 peptidyl-tRNA hydrolase domain-containing protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:pra03110]
D PALO_00910 ATP-dependent protease (Clp chaperone) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PALO_09135 negative regulator of genetic competence ClpC/MecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PALO_03125 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PALO_00790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PALO_05455 DnaK family protein K04044 hscA; molecular chaperone HscA
D PALO_08410 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_02105 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_00800 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PALO_06470 chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ
D PALO_00795 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PALO_07135 18 kDa antigen 2 K13993 HSP20; HSP20 family protein
D PALO_09540 heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D PALO_02100 chaperonin GroS K04078 groES; chaperonin GroES
D PALO_09215 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PALO_04720 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PALO_11170 peptidase S8 and S53 subtilisin kexin sedolisin K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D PALO_07725 peptidase families S8 and S53 K14645 K14645; serine protease [EC:3.4.21.-]
D PALO_10230 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PALO_07230 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PALO_05445 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PALO_10720 thioredoxin K03671 TXN; thioredoxin
D PALO_08320 thioredoxin K03671 TXN; thioredoxin
D PALO_05405 putative thioredoxin K05838 ybbN; putative thioredoxin
D PALO_09435 hypothetical protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:pra04131]
D PALO_06780 ndk; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PALO_00190 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PALO_10250 glycosyl hydrolase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PALO_03805 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_06815 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PALO_08745 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_06840 phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_06975 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PALO_05805 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pra03051]
D PALO_04925 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D PALO_04930 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D PALO_04160 DeoR family transcriptional regulator K13572 pafB; proteasome accessory factor B
D PALO_04165 regulatory protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:pra03032]
D PALO_02315 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PALO_02535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PALO_10530 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PALO_11090 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PALO_06265 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PALO_02990 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_11180 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_05220 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PALO_10525 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PALO_06575 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PALO_09345 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PALO_02330 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_07220 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_09530 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PALO_03935 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PALO_06945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PALO_03055 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PALO_10495 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PALO_05795 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PALO_10500 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PALO_05815 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PALO_09360 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pra03036]
D PALO_03845 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_09140 Lsr2-like protein K26249 lsr2; nucleoid-associated protein Lsr2
D PALO_02535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PALO_10530 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PALO_00415 starvation-inducible DNA-binding protein or fine tangled pili major subunit K04047 dps; starvation-inducible DNA-binding protein
D PALO_04885 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PALO_04305 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PALO_07060 penicillin-binding protein, transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PALO_04290 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PALO_07020 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D PALO_07035 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PALO_04310 efflux ABC transporter permease K09811 ftsX; cell division transport system permease protein
D PALO_07015 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PALO_07005 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D PALO_10575 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein K03496 parA; chromosome partitioning protein
D PALO_04135 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D PALO_10580 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PALO_02880 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PALO_10570 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PALO_03375 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PALO_04130 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PALO_07590 mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PALO_07875 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PALO_06820 putative sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:pra03400]
D PALO_03960 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PALO_07985 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PALO_11065 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PALO_09060 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PALO_09440 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PALO_08390 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D PALO_02075 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PALO_00845 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PALO_05750 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PALO_04770 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PALO_03850 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PALO_03075 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PALO_01525 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PALO_11135 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D PALO_03055 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PALO_06945 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PALO_06850 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PALO_06875 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PALO_06835 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PALO_04480 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_04505 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_02180 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PALO_01595 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PALO_01600 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PALO_01875 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PALO_05005 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PALO_08105 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PALO_07925 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PALO_07930 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PALO_05220 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PALO_10525 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PALO_06575 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PALO_09345 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PALO_02330 DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_07220 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PALO_09530 DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PALO_02990 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_11180 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_04495 putative exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D PALO_04500 putative exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D PALO_04490 exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PALO_05995 protein RecA K03553 recA; recombination protein RecA
D PALO_05175 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PALO_05170 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PALO_05180 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PALO_04990 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PALO_09005 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PALO_10515 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D PALO_03780 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PALO_06350 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PALO_09520 recombination protein RecR K06187 recR; recombination protein RecR
D PALO_04115 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PALO_00010 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D PALO_10495 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PALO_05795 DNA gyrase/topoisomerase IV, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PALO_10500 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PALO_05815 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PALO_09360 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PALO_02535 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D PALO_06455 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PALO_02595 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PALO_05940 LexA DNA binding domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D PALO_02735 hypothetical protein K14161 imuB; protein ImuB
D PALO_02740 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D PALO_05990 recX; recombination regulator RecX K03565 recX; regulatory protein
D PALO_05945 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PALO_08850 NUDIX family hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D PALO_04125 NUDIX family hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D PALO_05925 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PALO_00505 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PALO_00500 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:pra03029]
D PALO_03515 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PALO_04025 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PALO_03385 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D PALO_01640 translation elongation factor Tu K02358 tuf; elongation factor Tu
D PALO_01635 translation elongation factor G K02355 fusA; elongation factor G
D PALO_06375 era; GTPase Era K03595 era; GTPase
D PALO_04070 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PALO_06595 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PALO_05095 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PALO_06325 glycyl-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PALO_00450 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PALO_05320 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PALO_05315 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PALO_05325 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PALO_02990 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_11180 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PALO_00790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PALO_00795 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PALO_08410 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_02105 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_02100 chaperonin GroS K04078 groES; chaperonin GroES
D PALO_00800 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PALO_06470 chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ
D PALO_05355 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PALO_07590 mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PALO_03175 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PALO_03185 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_07570 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PALO_10550 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PALO_10590 membrane-associated protein K14998 SURF1; surfeit locus 1 family protein
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pra02000]
D PALO_00660 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D PALO_00665 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D PALO_09610 ABC transporter ABC/membrane protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D PALO_09755 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PALO_09760 Lipid A export ATP-binding/permease MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PALO_01280 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PALO_06895 ABC-type transport system, fused ATPase and permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PALO_09785 thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PALO_09780 thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PALO_10115 ABC transporter K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D PALO_08250 drug resistance ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D PALO_07375 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PALO_10110 ABC transporter K02021 ABC.MR; putative ABC transport system ATP-binding protein
D PALO_03555 transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D PALO_03550 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D PALO_03545 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D PALO_08585 ABC transporter-associated permease K05846 opuBD; osmoprotectant transport system permease protein
D PALO_08590 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PALO_08580 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PALO_08640 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D PALO_03220 putative periplasmic maltose-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D PALO_03215 maltose transport system permease MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PALO_03210 type IV conjugative transfer system protein TraL K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D PALO_01190 extracellular solute-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D PALO_01195 ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D PALO_01200 ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D PALO_02715 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D PALO_02710 binding-protein-dependent transport system inner membrane protein K10237 thuF; trehalose/maltose transport system permease protein
D PALO_02705 ABC transporter permease YurM K10238 thuG; trehalose/maltose transport system permease protein
D PALO_10265 sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D PALO_10270 ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D PALO_10275 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D PALO_03830 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D PALO_03825 ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D PALO_03820 binding-protein-dependent transport system inner membrane protein K17246 chiG; putative chitobiose transport system permease protein
D PALO_10470 D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D PALO_10475 ribose ABC transport system, permease protein RbsC/ribose ABC transport system, periplasmic ribose-binding protein RbsB K10440 rbsC; ribose transport system permease protein
D PALO_10480 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D PALO_00905 Extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D PALO_00895 sn-glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D PALO_00900 Binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D PALO_02290 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D PALO_02300 ABC transporter associated permease K23535 nupB; general nucleoside transport system permease protein
D PALO_02305 ABC transporter associated permease K23536 nupC; general nucleoside transport system permease protein
D PALO_02295 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D PALO_06270 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D PALO_10830 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PALO_00320 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PALO_08625 Tat (twin-arginine translocation) pathway signal sequence K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PALO_06500 Extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PALO_09750 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PALO_10320 family 1 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D PALO_10330 binding-protein-dependent transport system inner membrane protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PALO_06505 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D PALO_10835 putative galacto-N-biose-/lacto-N-biose I ABC transporter, permease component 1 K02025 ABC.MS.P; multiple sugar transport system permease protein
D PALO_00325 Permease component of ABC-type sugar transporter K02025 ABC.MS.P; multiple sugar transport system permease protein
D PALO_08620 sugar ABC transporter K02025 ABC.MS.P; multiple sugar transport system permease protein
D PALO_10840 putative galacto-N-biose-/lacto-N-biose I ABC transporter, permease component 2 K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PALO_10335 binding-protein-dependent transport system inner membrane protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PALO_06510 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PALO_00330 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PALO_08615 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D PALO_08855 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PALO_08860 phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D PALO_08865 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D PALO_08870 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PALO_10435 Amino acid ABC transporter, amino acid-binding/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D PALO_10430 Polar amino acid ABC transporter, ATP-binding subunit K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PALO_02170 outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D PALO_02160 transporter K02072 metI; D-methionine transport system permease protein
D PALO_02165 methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D PALO_02020 ABC transporter, extracellular substrate binding protein, probably General L-amino acid porter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PALO_07705 amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PALO_02010 amino acid permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PALO_02015 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PALO_07710 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PALO_07715 putative histidine transport ATP-binding protein hisp K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PALO_00125 family 5 extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PALO_00120 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PALO_00115 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PALO_00110 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D PALO_00105 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D PALO_01810 family 5 extracellular solute-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PALO_01805 family 5 extracellular solute-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D PALO_01790 binding-protein-dependent transport system inner membrane protein K13890 gsiC; glutathione transport system permease protein
D PALO_01795 binding-protein-dependent transport system inner membrane protein K13891 gsiD; glutathione transport system permease protein
D PALO_01800 Oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter K13892 gsiA; glutathione transport system ATP-binding protein
D PALO_04560 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PALO_04565 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PALO_07510 ABC-type transporter, permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PALO_04570 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PALO_04575 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PALO_07495 ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PALO_04580 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D PALO_06915 hemin receptor K25132 hmuT; heme transport system substrate-binding protein
D PALO_06910 Heme ABC transporter, permease protein HmuU K25133 hmuU; heme transport system permease protein
D PALO_06905 Heme ABC transporter, ATPase component HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D PALO_07550 iron transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PALO_04820 transporter subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PALO_08885 ABC-type transporter, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PALO_07545 iron chelate uptake ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PALO_04830 iron(3+)-hydroxamate import system permease protein fhuG K02015 ABC.FEV.P; iron complex transport system permease protein
D PALO_08875 putative permease, FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D PALO_04825 sulfate/thiosulfate import ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PALO_08880 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PALO_03325 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PALO_07540 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PALO_10090 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PALO_01515 iron ABC transporter K11601 mntC; manganese transport system substrate-binding protein
D PALO_01505 metal ion ABC transporter membrane protein K11602 mntB; manganese transport system permease protein
D PALO_01510 Mn/Zn ABC type transporter ATPase K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D PALO_11235 hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D PALO_11225 ABC transporter K11708 troC; manganese/zinc/iron transport system permease protein
D PALO_11220 ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein
D PALO_11230 manganese transport system ATP-binding protein MntA K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D PALO_03455 ABC transporter ATP-binding protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D PALO_03460 anchored repeat-type ABC transporter, ATP-binding subunit K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D PALO_08485 cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D PALO_08480 cobalt transport protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D PALO_08490 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D PALO_08475 membrane associated cobalt transport protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D PALO_04090 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D PALO_04100 cobalt permease-related transporter K16783 bioN; biotin transport system permease protein
D PALO_04095 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D PALO_00655 putative permease K16926 htsT; energy-coupling factor transport system substrate-specific component
D PALO_02635 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D PALO_01925 ABC transporter-associated permease K16927 cbrT; energy-coupling factor transport system substrate-specific component
D PALO_01935 ABC transporter-associated permease K16785 ecfT; energy-coupling factor transport system permease protein
D PALO_00645 ABC transporter associated permease (putative cobalt transport system) K16785 ecfT; energy-coupling factor transport system permease protein
D PALO_01930 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PALO_00650 ABC transporter ATP-binding protein (putative cobalt transport system) K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PALO_09850 ABC transporter K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D PALO_09855 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D PALO_07685 periplasmic solute binding family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PALO_07695 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PALO_07690 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PALO_05630 ABC-type antimicrobial peptide transport system, permease component K09813 hrtB; hemin transport system permease protein
D PALO_05635 ABC transporter K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D PALO_04310 efflux ABC transporter permease K09811 ftsX; cell division transport system permease protein
D PALO_04305 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D PALO_01920 ABC transporter associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PALO_06410 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PALO_03190 putative ABC transporter-associated permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PALO_08545 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D PALO_03520 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_09480 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_03195 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_08550 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_06415 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_01915 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_01415 transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_00620 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_01295 heme ABC transporter ATP-binding protein CcmA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PALO_00850 ABC transporter associated permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PALO_07480 ABC transporter inner membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PALO_10295 efflux ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PALO_11440 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D PALO_09505 efflux ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PALO_01275 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PALO_00855 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_00205 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_07485 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_10290 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_10190 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_09510 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_11445 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PALO_03245 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PALO_03350 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PALO_11010 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D PALO_06110 galactose-proton symporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D PALO_08315 MFS transporter, sugar porter (SP) family protein K06609 iolT; MFS transporter, SP family, major inositol transporter
D PALO_08225 L-fucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PALO_11195 arabinose efflux permease family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D PALO_05550 oxalate/formate-specific permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PALO_00995 sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D PALO_04795 transporter, major facilitator family protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D PALO_05805 transporter, major facilitator family protein K06902 UMF1; MFS transporter, UMF1 family
D PALO_01895 transporter, major facilitator family protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D PALO_06640 transporter, major facilitator family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D PALO_08805 putative phosphoenolpyruvate-protein kinase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PALO_08800 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D PALO_09925 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D PALO_09080 PTS system, glucose/sucrose specific IIA subunit K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_07385 PTS system N-acetylglucosamine-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D PALO_09075 PTS system glucose-specific transporter subunits IICB K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D PALO_07405 phosphotransferase system, EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D PALO_07390 phosphotransferase system, EIIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D PALO_07395 phosphotransferase system, EIIB K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D PALO_05390 phosphoenolpyruvate sugar phosphotransferase K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D PALO_11160 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D PALO_09920 ATP synthase F0 subunit A K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D PALO_08785 putative PTS family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D PALO_08740 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D PALO_08735 PTS system lactose/cellobiose specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PALO_08780 putative phosphotransferase enzyme K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D PALO_01240 PTS protein, putative dihydroxyacetone kinase phosphotransfer protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D PALO_10780 Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D PALO_05145 Ion channel K10716 kch; voltage-gated potassium channel
D PALO_09260 ammonium transporter K03320 amt; ammonium transporter, Amt family
D PALO_00435 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D PALO_02660 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D PALO_06155 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PALO_06160 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PALO_02655 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D PALO_08290 large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D PALO_10815 transporter, small conductance mechanosensitive ion channel (MscS) family protein K22044 ybiO; moderate conductance mechanosensitive channel
D PALO_08175 Mg2+/Co2+ transporter K03284 corA; magnesium transporter
D PALO_02380 putative magnesium transport protein K03284 corA; magnesium transporter
D PALO_06960 CrcB protein K06199 crcB; fluoride exporter
D PALO_06965 putative CrcB protein K06199 crcB; fluoride exporter
D PALO_02280 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PALO_06380 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PALO_07785 putative lysine-specific permease K11733 lysP; lysine-specific permease
D PALO_02760 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PALO_10885 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PALO_10890 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D PALO_08725 amino acid permease K11738 ansP; L-asparagine permease
D PALO_07835 Arginine/ornithine antiporter ArcD K03758 arcD; arginine:ornithine antiporter / lysine permease
D PALO_06445 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D PALO_08010 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D PALO_10440 transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PALO_07130 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D PALO_05810 transporter, anaerobic C4-dicarboxylate uptake (Dcu) family protein K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PALO_10130 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PALO_09815 transporter, lactate permease (LctP) family protein K03303 lutP; lactate permease
D PALO_09420 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D PALO_11395 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D PALO_05730 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PALO_05735 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PALO_08355 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D PALO_10175 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PALO_11035 chloride transporter, ClC family protein K03281 clcA; chloride channel protein, CIC family
D PALO_00870 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family protein K03322 mntH; manganese transport protein
D PALO_00190 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D PALO_06195 Putative membrane efflux protein K03893 arsB; arsenical pump membrane protein
D PALO_02675 hypothetical protein K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PALO_05830 Cryptic C4-dicarboxylate membrane transporter dcuD K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D PALO_00155 membrane protein, MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D PALO_11355 potassium transporter K03549 kup; KUP system potassium uptake protein
D PALO_06405 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D PALO_06600 integral membrane protein K22736 VIT; vacuolar iron transporter family protein
D PALO_07035 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PALO_03200 hppA; membrane-bound proton-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D PALO_08940 cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D PALO_09640 protein-tyrosine kinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D PALO_07770 capsular exopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D PALO_04005 transporter K03811 pnuC; nicotinamide mononucleotide transporter
D PALO_02565 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D PALO_02560 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:pra02044]
D PALO_09185 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PALO_09405 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PALO_10395 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PALO_09400 hypothetical protein K12510 tadB; tight adherence protein B
D PALO_10385 type II secretion system F domain protein K12511 tadC; tight adherence protein C
D PALO_07000 hypothetical protein K02221 yggT; YggT family protein
D PALO_06590 ComE operon protein 1 K02237 comEA; competence protein ComEA
D PALO_01235 cytidine and deoxycytidylate deaminase zinc-binding region K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PALO_06585 putative ComE operon protein 3 K02238 comEC; competence protein ComEC
D PALO_02940 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D PALO_04420 protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PALO_05160 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D PALO_01565 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PALO_05155 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D PALO_06800 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PALO_01825 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PALO_03880 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PALO_03870 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PALO_05165 translocase subunit K03210 yajC; preprotein translocase subunit YajC
D PALO_10550 inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PALO_04175 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PALO_07595 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D PALO_04180 twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pra02042]
D PALO_02280 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PALO_06380 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PALO_04975 hypothetical protein K11045 cfa; cAMP factor
D PALO_00570 CAMP factor (Cfa) K11045 cfa; cAMP factor
D PALO_07945 hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pra02022]
D PALO_08760 putative sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D PALO_08765 sensory transduction protein RegX K07776 regX3; two-component system, OmpR family, response regulator RegX3
D PALO_10025 Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D PALO_10020 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D PALO_00545 signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D PALO_00550 response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D PALO_04400 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D PALO_04395 transcriptional regulatory protein, C-terminal domain protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D PALO_00770 Sensor protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D PALO_00775 Two component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D PALO_08540 Histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D PALO_08535 Response regulator receiver domain-containing protein K07693 desR; two-component system, NarL family, response regulator DesR
D PALO_04630 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D PALO_06955 response regulator receiver domain-containing protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:pra02035]
D PALO_09185 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PALO_09405 putative secretory protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D PALO_10395 secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pra04812]
D PALO_07015 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PALO_10575 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein K03496 parA; chromosome partitioning protein
D PALO_04135 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D PALO_10580 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PALO_02880 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pra04147]
D PALO_00880 fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PALO_08070 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PALO_06815 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PALO_06810 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PALO_06975 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PALO_07230 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D PALO_08410 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_02105 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PALO_00790 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PALO_00430 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PALO_02120 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PALO_02125 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PALO_01640 translation elongation factor Tu K02358 tuf; elongation factor Tu
D PALO_04200 histidine triad domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PALO_06620 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01220 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_01225 lactate/malate dehydrogenase, NAD binding domain-containing protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PALO_03350 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PALO_03010 putative long-chain fatty-acid CoA ligase (AMP-binding enzyme) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_11140 long-chain-fatty-acid--CoA ligase/synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PALO_01830 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PALO_05150 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PALO_04340 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PALO_11290 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PALO_10870 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PALO_11325 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PALO_05380 1,4-alpha-glucan-branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PALO_11360 Family 13 glycosyl hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PALO_10785 glycerol kinase 2 K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PALO_07425 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_07465 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PALO_09050 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PALO_04585 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PALO_02225 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PALO_04850 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PALO_03170 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PALO_06805 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PALO_08745 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PALO_06840 phosphoglycerate mutase/fructose-2,6-bisphosphatase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:pra02048]
D PALO_00010 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D PALO_00005 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D PALO_00040 putative CRISPR-associated helicase Cas3 family protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D PALO_00035 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D PALO_00030 Cse2 family CRISPR-associated protein K19046 casB; CRISPR system Cascade subunit CasB
D PALO_00025 CRISPR-associated Cse4 family protein K19124 casC; CRISPR system Cascade subunit CasC
D PALO_00020 CRISPR-associated Cas5 family protein K19125 casD; CRISPR system Cascade subunit CasD
D PALO_00015 CRISPR-associated Cse3 family protein K19126 casE; CRISPR system Cascade subunit CasE
D PALO_03640 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PALO_03635 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PALO_04810 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PALO_03630 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PALO_05520 phage associated protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PALO_03740 phage associated protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D PALO_08895 mrr restriction system protein K07448 mrr; restriction system protein
D PALO_02145 hypothetical protein K03973 pspC; phage shock protein C
D PALO_00275 toxin-antitoxin system K07341 doc; death on curing protein
D PALO_07015 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PALO_04155 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_01660 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PALO_05355 class V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pra04090]
C 01504 Antimicrobial resistance genes [BR:pra01504]
D PALO_08250 drug resistance ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pra00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pra03100]
D PALO_t11537 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11539 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11547 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11557 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PALO_t11549 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11521 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PALO_t11535 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PALO_t11485 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PALO_t11529 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PALO_t11513 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PALO_t11545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PALO_t11515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PALO_t11487 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PALO_t11527 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PALO_t11509 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PALO_t11481 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PALO_t11503 tRNA-His K14226 tRNA-His; tRNA His
D PALO_t11559 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PALO_t11499 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11543 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11541 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11479 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11511 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PALO_t11501 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PALO_t11489 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PALO_t11533 tRNA-Met K14230 tRNA-Met; tRNA Met
D PALO_t11519 tRNA-Met K14230 tRNA-Met; tRNA Met
D PALO_t11495 tRNA-Met K14230 tRNA-Met; tRNA Met
D PALO_t11483 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PALO_t11477 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PALO_t11507 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PALO_t11523 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PALO_t11561 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11555 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11567 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11563 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PALO_t11553 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PALO_t11551 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PALO_t11493 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PALO_t11497 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PALO_t11491 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PALO_t11517 tRNA-Val K14237 tRNA-Val; tRNA Val
D PALO_t11531 tRNA-Val K14237 tRNA-Val; tRNA Val
D PALO_t11525 tRNA-Val K14237 tRNA-Val; tRNA Val
D PALO_r11575 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11579 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11577 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PALO_r11581 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11585 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11583 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PALO_r11569 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11571 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PALO_r11573 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PALO_00445 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PALO_06080 putative oxidoreductase protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PALO_01310 putative electron transfer oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D PALO_02360 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PALO_11085 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D PALO_08900 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D PALO_01045 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D PALO_08000 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PALO_05660 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PALO_02695 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PALO_07790 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PALO_01050 alkyl hydroperoxide reductase C22 protein K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PALO_11205 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D PALO_04380 protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PALO_00405 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PALO_08890 ribosomal RNA large subunit methyltransferase J-like protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D PALO_11430 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PALO_10900 threonine synthase / cystathionine beta-synthase K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D PALO_04880 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PALO_07665 N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D PALO_11240 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PALO_05900 hypothetical protein K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D PALO_07415 glycosyltransferase, group 1 family protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PALO_05270 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PALO_00740 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D PALO_07455 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D PALO_09010 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D PALO_06665 phosphotriesterase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D PALO_08565 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PALO_03015 acyl-CoA thioester hydrolase, YbgC/YbaW family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PALO_06705 Iojap-like protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D PALO_04445 metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D PALO_09250 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PALO_08155 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PALO_05435 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D PALO_00580 cellulase (glycosyl hydrolase family 5) K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D PALO_06635 putative S12 family peptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D PALO_09310 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PALO_03360 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PALO_00160 protein YjeA K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PALO_00175 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PALO_02640 ATPase family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PALO_06170 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PALO_07080 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PALO_02030 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PALO_00075 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
C 99981 Carbohydrate metabolism
D PALO_09810 L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PALO_09805 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PALO_09800 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PALO_03255 nifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PALO_06150 pyridoxal phosphate enzyme, YggS family protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PALO_11115 hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D PALO_06460 hypothetical protein K15977 K15977; putative oxidoreductase
D PALO_09340 hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PALO_08370 cold-shock protein K03704 cspA; cold shock protein
D PALO_07885 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D PALO_02545 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PALO_03105 tig; trigger factor K03545 tig; trigger factor
D PALO_04315 ssrA-binding protein K03664 smpB; SsrA-binding protein
D PALO_03950 Mg chelatase-like protein K07391 comM; magnesium chelatase family protein
D PALO_10725 OsmC-like protein K07397 yhfA; putative redox protein
D PALO_08935 ResB-like protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D PALO_07910 flagellar protein FliS K09760 rmuC; DNA recombination protein RmuC
D PALO_03945 hypothetical protein K07460 yraN; putative endonuclease
D PALO_00305 DNA protecting protein DprA K04096 smf; DNA processing protein
D PALO_03955 DNA protecting protein DprA K04096 smf; DNA processing protein
D PALO_05090 recombination factor protein RarA K07478 ycaJ; putative ATPase
D PALO_00380 transposase K07483 K07483; transposase
D PALO_11095 hypothetical protein K07483 K07483; transposase
D PALO_08195 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D PALO_00230 transposase K07485 K07485; transposase
D PALO_05710 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D PALO_10760 integrase catalytic subunit K07497 K07497; putative transposase
D PALO_02785 Integrase catalytic region K07497 K07497; putative transposase
D PALO_08245 integrase catalytic subunit K07497 K07497; putative transposase
D PALO_00215 integrase catalytic subunit K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PALO_07320 PspA/IM30 family protein K03969 pspA; phage shock protein A
D PALO_09525 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PALO_00840 amino acid permease YtnA K03293 TC.AAT; amino acid transporter, AAT family
D PALO_11030 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PALO_10355 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PALO_09940 amino acid/peptide transporter (Peptide:H+ symporter) K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PALO_00780 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D PALO_11320 sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PALO_07995 sodium-and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PALO_02110 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PALO_00835 AspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
C 99978 Cell growth
D PALO_09630 hypothetical protein K06320 cgeB; spore maturation protein CgeB
D PALO_10555 jag-like protein K06346 jag; spoIIIJ-associated protein
D PALO_02960 recombinase K06400 spoIVCA; site-specific DNA recombinase
D PALO_04355 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D PALO_09295 resolvase K06400 spoIVCA; site-specific DNA recombinase
D PALO_09300 recombinase K06400 spoIVCA; site-specific DNA recombinase
D PALO_05695 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D PALO_07525 carbon starvation protein A K06200 cstA; carbon starvation protein
D PALO_00985 GTP-binding protein TypA K06207 typA; GTP-binding protein
D PALO_06390 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D PALO_07940 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D PALO_03110 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D PALO_08755 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D PALO_08400 CutC family protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PALO_03280 acetyltransferase family protein K02348 elaA; ElaA protein
D PALO_09375 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D PALO_10205 putative membrane transport protein K06994 K06994; putative drug exporter of the RND superfamily
D PALO_01215 phospholipase K07001 K07001; NTE family protein
D PALO_03230 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D PALO_03235 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D PALO_05555 putative tRNA-processing ribonuclease K07058 K07058; membrane protein
D PALO_00930 DedA family membrane protein K03975 dedA; membrane-associated protein
D PALO_07410 hypothetical protein K03975 dedA; membrane-associated protein
D PALO_04945 hypothetical protein K01421 yhgE; putative membrane protein
D PALO_00490 Bacterial membrane flanked domain-containing protein K08981 K08981; putative membrane protein
D PALO_04815 hypothetical protein K08996 yagU; putative membrane protein
C 99997 Function unknown
D PALO_11145 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein
D PALO_07955 hypothetical protein K06888 K06888; uncharacterized protein
D PALO_03895 hypothetical protein K06960 K06960; uncharacterized protein
D PALO_10125 hypothetical protein K06975 K06975; uncharacterized protein
D PALO_03450 Acetyltransferase, GNAT family protein K06976 K06976; uncharacterized protein
D PALO_03440 putative extracellular nuclease K07004 K07004; uncharacterized protein
D PALO_03785 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D PALO_03270 Membrane glycine rich protein K07054 K07054; uncharacterized protein
D PALO_09095 NAD dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D PALO_00165 hypothetical protein K07089 K07089; uncharacterized protein
D PALO_03490 hypothetical protein K07090 K07090; uncharacterized protein
D PALO_00140 phosphoesterase K07098 K07098; uncharacterized protein
D PALO_07670 phosphoribosyl transferase domain-containing protein K07101 K07101; uncharacterized protein
D PALO_06240 hypothetical protein K07112 K07112; uncharacterized protein
D PALO_08920 short chain dehydrogenase/reductase family oxidoreductase K07124 K07124; uncharacterized protein
D PALO_11130 short chain dehydrogenase K07124 K07124; uncharacterized protein
D PALO_03130 hypothetical protein K07126 K07126; uncharacterized protein
D PALO_07895 hypothetical protein K07133 K07133; uncharacterized protein
D PALO_07560 hypothetical protein K07164 K07164; uncharacterized protein
D PALO_10545 hypothetical protein K08998 K08998; uncharacterized protein
D PALO_05565 hypothetical protein K08999 K08999; uncharacterized protein
D PALO_08050 hypothetical protein K09009 K09009; uncharacterized protein
D PALO_00495 Membrane-flanked domain-containing protein K09167 K09167; uncharacterized protein
D PALO_10235 hypothetical protein K09704 K09704; uncharacterized protein
D PALO_00515 hypothetical protein K09780 K09780; uncharacterized protein
D PALO_02500 hypothetical protein K09791 K09791; uncharacterized protein
D PALO_00100 hypothetical protein K09861 K09861; uncharacterized protein
D PALO_00760 hypothetical protein K09992 K09992; uncharacterized protein
D PALO_09280 hypothetical protein K05937 K05937; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024