+D GENES KO
#
KEGG Orthology (KO) - Xylanibacter ruminicola
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pru00010]
D PRU_0241 glkA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_0395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_2364 ROK family domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1688 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1689 transcriptional regulator, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1785 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_0792 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PRU_0476 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PRU_2062 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PRU_1674 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRU_1634 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PRU_2355 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PRU_1017 putative homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PRU_1102 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRU_0684 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRU_1512 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_1235 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PRU_2267 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_1149 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_2268 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PRU_0157 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PRU_0424 galM_1; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PRU_0427 galM_2; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PRU_2794 agp; glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_2279 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:pru00020]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_2267 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_1149 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_2268 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PRU_1147 keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PRU_1150 putative ferridoxin oxidoreductase, 4Fe-4S binding subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PRU_2432 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PRU_2431 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PRU_2433 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PRU_0119 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PRU_0254 putative pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PRU_2279 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PRU_1235 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:pru00030]
D PRU_1785 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRU_0232 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PRU_0393 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PRU_0392 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PRU_2483 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_0673 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PRU_0872 putative 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PRU_0873 putative 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D PRU_2062 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PRU_0476 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_0792 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:pru00040]
D PRU_0012 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D PRU_1101 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D PRU_0496 putative pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D PRU_1290 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D PRU_1363 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D PRU_1646 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D PRU_0875 uxaA; altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D PRU_0736 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D PRU_0735 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D PRU_2313 glycosyl hydrolase, family 2 K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D PRU_1313 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_1769 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_0421 putative L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PRU_0232 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PRU_0420 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D PRU_1379 putative xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D PRU_1468 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D PRU_1465 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D PRU_2781 fucI; arabinose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:pru00051]
D PRU_1726 carbohydrate esterase, family 7/glycosyl hydrolase, family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PRU_2278 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRU_2638 kinase, pfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRU_2880 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PRU_0304 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PRU_0975 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PRU_1376 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_2758 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_0433 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_1770 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_1377 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PRU_1378 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PRU_2781 fucI; arabinose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D PRU_1467 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D PRU_1468 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D PRU_1465 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_0792 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D PRU_0476 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PRU_2062 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PRU_2276 fructan beta-(2,6)-fructosidase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D PRU_0392 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:pru00052]
D PRU_0424 galM_1; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PRU_0427 galM_2; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PRU_0425 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PRU_0450 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRU_0847 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_0241 glkA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_0395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_2364 ROK family domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1688 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1689 transcriptional regulator, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1522 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_2769 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1079 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0693 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0692 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1593 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0082 putative beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PRU_1568 glycosyl hydrolase, family 35 K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D PRU_1527 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PRU_2514 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PRU_1291 sugar transporter, PTS galactitol (Gat) family, IIC component K02775 gatC; galactitol PTS system EIIC component
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_2275 glycosyl hydrolase, family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PRU_0270 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PRU_2182 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PRU_1635 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:pru00053]
D PRU_1313 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_1769 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_2313 glycosyl hydrolase, family 2 K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D PRU_1542 polysaccharide biosynthesis protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PRU_2842 oxidoreductase, aldo/keto reductase family K23003 lgaA; L-galactose dehydrogenase [EC:1.1.1.-]
D PRU_2841 amidohydrolase family protein K23004 lgaB; L-galactono-1,5-lactonase [EC:3.1.1.-]
D PRU_2840 oxidoreductase, zinc-binding dehydrogenase family K23005 lgaC; L-galactonate 5-dehydrogenase [EC:1.1.1.414]
D PRU_0421 putative L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:pru00500]
D PRU_2275 glycosyl hydrolase, family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D PRU_0270 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PRU_2182 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PRU_1635 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PRU_2786 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2590 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1956 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1167 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_0416 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2693 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2730 putative 1,4-beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1940 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2312 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1812 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2655 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2516 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_1856 glycosyl hydrolase, family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_2222 cellulase domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_2231 endo-1,4-beta-xylanase/cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_0153 cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D PRU_0434 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PRU_0992 glycogen synthase-like protein K00703 glgA; starch synthase [EC:2.4.1.21]
D PRU_1660 glycosyltransferase, group 1 family K16150 K16150; glycogen synthase [EC:2.4.1.11]
D PRU_1305 putative 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PRU_0671 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PRU_2749 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D PRU_2685 alpha-amylase family protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PRU_1659 glycosyl hydrolase, family 57 K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D PRU_2750 susB; alpha-glucosidase K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D PRU_2751 putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PRU_1371 putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_0241 glkA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_0395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_2364 ROK family domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1688 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1689 transcriptional regulator, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1785 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRU_2278 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRU_2638 kinase, pfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pru00520]
D PRU_0656 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PRU_1156 glycosyl hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_1157 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_0394 glycosyl hydrolase, family 2 K15855 csxA; exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
D PRU_1155 dehydrogenase domain protein K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PRU_0116 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D PRU_2278 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRU_2638 kinase, pfkB family K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRU_0891 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PRU_2383 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PRU_1679 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D PRU_2927 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRU_0584 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PRU_1368 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PRU_0101 polysaccharide biosynthesis family protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PRU_0418 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PRU_0465 glycosyl hydrolase, family 51 K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PRU_1622 putative alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PRU_2606 putative alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D PRU_2744 glycosyl hydrolase, family 43/carbohydrate binding module, family 6 domain protein K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D PRU_2674 glycosyl hydrolase, family 43 K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D PRU_0241 glkA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_0395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_2364 ROK family domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1688 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1689 transcriptional regulator, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_1313 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_1769 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_0425 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PRU_0450 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRU_0847 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRU_1527 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PRU_1542 polysaccharide biosynthesis protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PRU_1544 putative galactokinase K18677 GALAK; galacturonokinase [EC:2.7.1.44]
D PRU_1785 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRU_2880 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PRU_0304 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PRU_0975 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PRU_1376 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_2758 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_0433 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_1770 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_1377 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PRU_1378 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PRU_0129 putative kinase K25314 FKGP; fucokinase / fucose-1-phosphate guanylyltransferase [EC:2.7.1.52 2.7.7.30]
D PRU_0434 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PRU_0435 CDP-D-glucose-4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
C 00620 Pyruvate metabolism [PATH:pru00620]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PRU_1235 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PRU_2267 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_1149 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_2268 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_1243 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PRU_2259 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRU_2260 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRU_0684 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRU_0157 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PRU_1654 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PRU_1644 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PRU_0254 putative pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PRU_0119 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PRU_2279 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PRU_1512 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PRU_0729 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pru00630]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PRU_1230 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PRU_1639 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_1640 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_0689 hprA; glycerate dehydrogenase (NADH-dependent) K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PRU_1370 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PRU_0373 haloacid dehalogenase-like hydrolase domain protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D PRU_1416 glnA_1; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1957 glnA_2; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2071 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_0635 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRU_2046 gcvP1; glycine dehydrogenase (decarboxylating), subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PRU_2045 gcvP2; glycine dehydrogenase (decarboxylating), subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PRU_2048 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_2047 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PRU_1696 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PRU_0872 putative 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PRU_0486 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:pru00640]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PRU_0157 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PRU_2259 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRU_2260 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_1243 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PRU_1230 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PRU_1639 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_1640 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_2762 putative coenzyme A transferase K22214 scpC; propionyl-CoA:succinyl-CoA transferase [EC:2.8.3.27]
C 00650 Butanoate metabolism [PATH:pru00650]
D PRU_2349 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D PRU_2350 putative phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D PRU_1644 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PRU_1643 putative biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PRU_1232 putative biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PRU_2432 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PRU_2431 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PRU_2433 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PRU_1243 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D PRU_1235 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PRU_2267 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_1149 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_2268 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PRU_1077 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PRU_1076 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pru00660]
D PRU_1077 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PRU_1076 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PRU_0732 (R)-citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D PRU_0730 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PRU_0731 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PRU_0733 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pru00562]
D PRU_1146 inositol-1-monophosphatase/HD domain protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PRU_1281 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pru00190]
D PRU_1721 putative proton-translocating NADH-quinone oxidoreductase, A subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PRU_1720 putative proton-translocating NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PRU_1719 putative proton-translocating NADH-quinone oxidoreductase, D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D PRU_1718 putative proton-translocating NADH-quinone oxidoreductase, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PRU_1717 putative proton-translocating NADH-quinone oxidoreductase, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PRU_1716 putative proton-translocating NADH-quinone oxidoreductase, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PRU_1715 putative proton-translocating NADH-quinone oxidoreductase, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PRU_1714 proton-translocating NADH-quinone oxidoreductase, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PRU_1713 proton-translocating NADH-quinone oxidoreductase, M subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PRU_1712 proton-translocating NADH-quinone oxidoreductase, N subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PRU_2432 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PRU_2431 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PRU_2433 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PRU_1261 putative cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PRU_1262 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PRU_1192 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PRU_1199 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PRU_1191 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PRU_1193 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PRU_1198 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PRU_1196 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PRU_1194 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PRU_1195 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:pru00710]
D PRU_1634 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PRU_1674 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRU_2062 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PRU_0476 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PRU_0393 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PRU_0392 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PRU_0232 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PRU_2279 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PRU_1512 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:pru00720]
D PRU_1235 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D PRU_1512 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D PRU_0254 putative pyruvate carboxylase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PRU_0119 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D PRU_2432 succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PRU_2431 succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PRU_2433 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PRU_2267 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_1149 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D PRU_2268 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D PRU_1147 keto/oxoacid ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D PRU_1150 putative ferridoxin oxidoreductase, 4Fe-4S binding subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D PRU_1230 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PRU_1639 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_1640 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_1152 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PRU_1700 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PRU_2260 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRU_2259 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:pru00680]
D PRU_0635 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRU_0689 hprA; glycerate dehydrogenase (NADH-dependent) K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PRU_1102 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PRU_2062 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PRU_0476 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_2259 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRU_2260 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PRU_2355 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PRU_1017 putative homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PRU_1036 serA; D-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PRU_1038 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PRU_1999 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:pru00910]
D PRU_2084 glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PRU_1214 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PRU_1416 glnA_1; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1957 glnA_2; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2071 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1960 gltA_2; glutamate synthase (NADPH), large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PRU_0699 gltA_1; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PRU_1959 gltD; glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:pru00920]
D PRU_0302 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PRU_2687 putative bacterial transferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_1565 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_1528 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_2792 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PRU_0609 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pru00061]
D PRU_2562 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PRU_0675 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PRU_2938 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PRU_2561 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PRU_0297 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRU_0707 UDP-3-0-acyl N-acetylglucosamine deacetylase/beta-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PRU_1303 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_2490 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1302 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D PRU_1303 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_2490 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1302 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D PRU_2562 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PRU_0675 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pru00561]
D PRU_1696 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PRU_1611 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PRU_2514 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:pru00564]
D PRU_1692 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PRU_1611 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PRU_0045 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PRU_1894 putative CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PRU_1895 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D PRU_2542 HAD-superfamily hydrolase, subfamily IB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D PRU_1994 putative phospholipase D K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PRU_1629 putative phospholipase D K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:pru00600]
D PRU_1522 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_2769 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1079 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0693 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0692 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1593 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_2514 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PRU_1156 glycosyl hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_1157 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pru00230]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_0673 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PRU_1973 glutamine amidotransferase, class-II domain protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRU_0553 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRU_1807 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PRU_2043 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PRU_0175 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D PRU_2663 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D PRU_0720 putative phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PRU_2857 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PRU_0723 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PRU_0056 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PRU_1927 putative phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PRU_2478 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PRU_1923 Ser/Thr protein phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PRU_1666 5'-nucleotidase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PRU_0018 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PRU_0310 punA; purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PRU_1015 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PRU_2868 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PRU_0032 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PRU_2528 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PRU_0581 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PRU_1678 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PRU_1554 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PRU_2547 putative guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PRU_1366 nrdD_1; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PRU_2851 nrdD_2; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PRU_2915 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PRU_1210 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PRU_0013 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PRU_2622 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PRU_2493 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D PRU_0986 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PRU_2844 deoxyguanosine kinase/deoxyadenosine kinase subunit K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PRU_2845 deoxyguanosine kinase/deoxyadenosine kinase subunit K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PRU_1310 putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PRU_2869 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PRU_1035 HIT domain protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:pru00240]
D PRU_0889 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRU_1030 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRU_0637 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PRU_0636 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PRU_1614 pyrC; dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PRU_0543 pyrD; dihydroorotate oxidase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PRU_0542 pyrK; dihydroorotate oxidase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D PRU_2395 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PRU_0710 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PRU_1892 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PRU_1205 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PRU_1972 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PRU_1828 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PRU_2603 phosphoribulokinase/uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48]
D PRU_2486 phosphoribulokinase/uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48]
D PRU_1343 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PRU_1923 Ser/Thr protein phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PRU_1666 5'-nucleotidase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PRU_0018 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PRU_0696 phosphorylase family protein K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PRU_2005 phosphorylase family protein K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PRU_2270 putative uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PRU_1310 putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D PRU_0980 putative cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PRU_1366 nrdD_1; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PRU_2851 nrdD_2; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PRU_2844 deoxyguanosine kinase/deoxyadenosine kinase subunit K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PRU_2845 deoxyguanosine kinase/deoxyadenosine kinase subunit K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PRU_0197 cytidine/deoxycytidylate deaminase zinc-binding domain protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PRU_2916 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PRU_1868 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PRU_1278 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PRU_1814 dihydroorotate oxidase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PRU_0488 oxidoreductase, short chain dehydrogenase/reductase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pru00250]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1996 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PRU_1711 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PRU_1978 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PRU_0397 hydrolase, carbon-nitrogen family K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PRU_2067 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PRU_2199 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PRU_2393 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PRU_0986 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PRU_0056 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PRU_0637 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PRU_0636 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D PRU_1960 gltA_2; glutamate synthase (NADPH), large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PRU_0699 gltA_1; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PRU_1959 gltD; glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D PRU_2084 glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PRU_1214 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PRU_1416 glnA_1; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1957 glnA_2; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2071 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_0889 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRU_1030 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRU_0658 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PRU_0891 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PRU_1973 glutamine amidotransferase, class-II domain protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRU_0553 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pru00260]
D PRU_0480 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRU_1016 thrA; aspartate kinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PRU_0050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRU_1018 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PRU_2214 putative L-threonine aldolase, low-specificity K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PRU_0635 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRU_0689 hprA; glycerate dehydrogenase (NADH-dependent) K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D PRU_1696 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D PRU_2355 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PRU_1017 putative homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PRU_1036 serA; D-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PRU_1038 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PRU_1999 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D PRU_0488 oxidoreductase, short chain dehydrogenase/reductase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PRU_2046 gcvP1; glycine dehydrogenase (decarboxylating), subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PRU_2045 gcvP2; glycine dehydrogenase (decarboxylating), subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PRU_2048 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_2047 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D PRU_1894 putative CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PRU_1460 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PRU_1454 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PRU_1351 pyridoxal-phosphate dependent TrpB-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pru00270]
D PRU_2687 putative bacterial transferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_1565 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_1528 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_2792 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PRU_2309 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRU_0799 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PRU_2294 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PRU_0126 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PRU_1015 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D PRU_0550 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PRU_0938 prophage PRU01, DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0361 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0362 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0666 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0125 luxS; autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PRU_0480 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRU_1016 thrA; aspartate kinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PRU_0050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRU_0609 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PRU_2080 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PRU_2791 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PRU_0166 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_2158 putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PRU_1036 serA; D-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PRU_1038 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:pru00280]
D PRU_0166 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_1230 glyoxalase family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PRU_1639 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_1640 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pru00290]
D PRU_0732 (R)-citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D PRU_0730 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D PRU_0731 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D PRU_0733 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D PRU_1077 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PRU_1076 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PRU_0551 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PRU_1078 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PRU_0166 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PRU_0729 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pru00300]
D PRU_0480 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRU_1016 thrA; aspartate kinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PRU_0050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRU_1224 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PRU_2449 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PRU_2201 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PRU_1958 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PRU_1974 aminotransferase-like protein K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PRU_1173 aminotransferase, class I/II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PRU_0479 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PRU_2042 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D PRU_2328 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PRU_2263 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PRU_0131 alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:pru00220]
D PRU_2199 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PRU_2393 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PRU_0658 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PRU_1416 glnA_1; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1957 glnA_2; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2071 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_0889 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRU_1030 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRU_2084 glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PRU_1214 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_2621 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PRU_2200 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PRU_2201 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PRU_2920 putative acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:pru00330]
D PRU_2625 speA; arginine 2-monooxygenase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PRU_1417 hydrolase, carbon-nitrogen family K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D PRU_0067 lys1; saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D PRU_0887 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D PRU_0894 speG; spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D PRU_2202 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PRU_2207 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PRU_2208 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PRU_1316 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pru00340]
D PRU_0390 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PRU_0482 hisIE; phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PRU_0484 hisA; 1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PRU_0485 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PRU_0483 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PRU_0455 hisB; histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PRU_0388 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_2906 aminotransferase, class I/II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_0389 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:pru00350]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_0388 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_2906 aminotransferase, class I/II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:pru00360]
D PRU_0059 putative phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D PRU_1668 thioesterase family protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_0388 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_2906 aminotransferase, class I/II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pru00400]
D PRU_1681 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PRU_2289 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PRU_2626 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PRU_1902 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PRU_0544 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PRU_1455 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PRU_1456 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PRU_1457 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PRU_1458 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PRU_1460 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PRU_1454 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PRU_1351 pyridoxal-phosphate dependent TrpB-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PRU_1172 phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D PRU_0284 pheC; cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D PRU_1174 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_0388 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_2906 aminotransferase, class I/II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pru00410]
D PRU_2452 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PRU_2451 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PRU_1814 dihydroorotate oxidase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
C 00430 Taurine and hypotaurine metabolism [PATH:pru00430]
D PRU_2067 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PRU_2260 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRU_2259 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D PRU_0585 putative phnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pru00450]
D PRU_2309 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRU_0799 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PRU_2376 sufS; cysteine desulfurase, SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PRU_1348 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PRU_2535 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pru00460]
D PRU_2786 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2590 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1956 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1167 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_0416 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2693 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2730 putative 1,4-beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1940 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2312 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1812 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2655 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1711 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PRU_0635 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pru00470]
D PRU_0131 alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PRU_2235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRU_0658 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PRU_2287 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PRU_2330 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PRU_1958 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PRU_0479 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:pru00480]
D PRU_0766 pepD_1; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PRU_1551 pepD_2; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PRU_1347 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PRU_2788 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pru00511]
D PRU_1522 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_2769 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1079 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0693 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_0692 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1593 glycosyl hydrolase, family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRU_1156 glycosyl hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_1157 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_2181 glycosyl hydrolase, family 38/DS domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PRU_1164 alpha-L-fucosidase family protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PRU_1166 DS domain protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PRU_2780 glycosyl hydrolase, family 29 K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PRU_2729 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D PRU_2351 conserved hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:pru00540]
D PRU_0706 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PRU_0707 UDP-3-0-acyl N-acetylglucosamine deacetylase/beta-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PRU_0708 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PRU_2253 LpxH family protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PRU_0019 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PRU_0309 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PRU_1627 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PRU_0446 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PRU_1626 kdsA_2; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PRU_0445 kdsA_1; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PRU_1206 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PRU_1308 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PRU_2166 putative glycosyl transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PRU_2910 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PRU_2545 sulfatase family protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
C 00542 O-Antigen repeat unit biosynthesis [PATH:pru00542]
D PRU_0112 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_0113 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:pru00541]
D PRU_0450 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRU_0847 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRU_1527 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PRU_1313 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_1769 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PRU_1542 polysaccharide biosynthesis protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PRU_1543 nucleotidyltransferase family protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0229 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0173 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PRU_0085 rfbC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PRU_0437 rfbC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PRU_0238 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PRU_0434 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D PRU_0435 CDP-D-glucose-4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D PRU_2880 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PRU_0304 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PRU_0975 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PRU_1376 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_2758 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_0433 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_1770 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PRU_1377 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PRU_1378 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PRU_1368 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PRU_0101 polysaccharide biosynthesis family protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PRU_0102 conserved hypothetical protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D PRU_0103 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
C 00550 Peptidoglycan biosynthesis [PATH:pru00550]
D PRU_2927 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRU_0584 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PRU_2333 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PRU_2330 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PRU_2328 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PRU_2235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRU_2263 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PRU_0131 alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PRU_2282 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PRU_1833 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PRU_0762 PAP2 domain protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PRU_2329 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PRU_2332 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PRU_1042 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PRU_0638 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_0704 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_1705 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PRU_2327 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PRU_0828 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRU_1998 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:pru00552]
D PRU_1833 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PRU_0762 PAP2 domain protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PRU_0112 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_0113 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_2539 putative licD protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D PRU_1430 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D PRU_2909 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D PRU_0112 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_0113 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:pru00543]
D PRU_0112 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_0113 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_2687 putative bacterial transferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_1565 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PRU_1528 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pru00730]
D PRU_0402 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D PRU_0406 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PRU_2766 putative phosphomethylpyrimidine kinase/transcriptional regulator, AraC family K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PRU_0404 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D PRU_2883 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PRU_0401 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D PRU_0400 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PRU_0405 putative thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PRU_0674 thiamine-phosphate pyrophosphorylase-like protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PRU_0311 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PRU_0075 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PRU_2869 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:pru00740]
D PRU_1913 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PRU_2399 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PRU_0967 HAD-superfamily hydrolase, subfamily IA, variant 3 K21063 K21063; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D PRU_0203 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PRU_1369 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PRU_2617 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:pru00750]
D PRU_2660 pyridoxal kinase-like protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D PRU_1038 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PRU_1561 putative 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D PRU_1018 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PRU_2767 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D PRU_2768 pdxT; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pru00760]
D PRU_1996 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D PRU_2530 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D PRU_0740 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PRU_0310 punA; purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PRU_1923 Ser/Thr protein phosphatase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PRU_1666 5'-nucleotidase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D PRU_0018 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D PRU_2546 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PRU_1311 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D PRU_0811 nadE; glutamine-dependent NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PRU_0747 competence/damage-inducible protein CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PRU_2859 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PRU_1941 ppnK; ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:pru00770]
D PRU_1077 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D PRU_1076 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D PRU_0551 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D PRU_1078 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D PRU_2450 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PRU_1142 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PRU_2451 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PRU_0313 putative pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D PRU_2454 transcriptional activator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PRU_2453 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PRU_2469 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PRU_0244 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PRU_1948 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PRU_0166 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PRU_1814 dihydroorotate oxidase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D PRU_2452 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:pru00780]
D PRU_2561 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PRU_0297 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRU_0463 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PRU_1891 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pru00785]
D PRU_2049 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_2046 gcvP1; glycine dehydrogenase (decarboxylating), subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D PRU_2045 gcvP2; glycine dehydrogenase (decarboxylating), subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D PRU_2048 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PRU_2047 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pru00790]
D PRU_1862 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PRU_1286 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PRU_1830 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PRU_1039 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PRU_2262 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PRU_1279 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PRU_0428 folC; tetrahydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PRU_1913 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PRU_2594 protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PRU_0253 GTP cyclohydrolase family protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PRU_1317 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:pru00670]
D PRU_1279 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PRU_1152 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PRU_0635 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRU_2043 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PRU_1927 putative phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PRU_0234 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PRU_2048 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PRU_0799 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PRU_1278 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PRU_0486 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D PRU_1700 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PRU_0199 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pru00860]
D PRU_2167 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PRU_2553 conserved hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PRU_2296 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PRU_2550 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PRU_2784 hemN; coproporphyrinogen dehydrogenase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D PRU_2785 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PRU_1084 cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D PRU_1089 cobKD; precorrin-6x reductase/cobalamin biosynthetic protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D PRU_1087 cobL; precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D PRU_1086 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D PRU_2190 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PRU_1081 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D PRU_1080 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D PRU_1093 cobP; cobinamide kinase/cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D PRU_1092 cobS; cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D PRU_1094 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D PRU_2511 aminotransferase, class I/II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D PRU_2313 glycosyl hydrolase, family 2 K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:pru00130]
D PRU_0722 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PRU_1686 menF; menaquinone-specific isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D PRU_1685 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PRU_1682 O-succinylbenzoic acid--CoA ligase-like protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PRU_1684 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PRU_1360 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pru00900]
D PRU_2883 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PRU_2925 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PRU_2537 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PRU_1943 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PRU_0846 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PRU_2689 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PRU_2858 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PRU_0161 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PRU_1825 idsA; short chain isoprenyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PRU_2484 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PRU_2282 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PRU_0393 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pru00523]
D PRU_1543 nucleotidyltransferase family protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0229 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0173 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PRU_0085 rfbC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PRU_0437 rfbC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PRU_0238 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PRU_1686 menF; menaquinone-specific isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D PRU_0173 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:pru00946]
D PRU_2786 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2590 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1956 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1167 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_0416 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2693 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2730 putative 1,4-beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1940 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2312 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1812 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2655 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1162 putative glycolsyl hydrolase, family 18/alpha-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:pru00332]
D PRU_2207 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PRU_2208 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:pru00261]
D PRU_0480 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRU_1016 thrA; aspartate kinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D PRU_0050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRU_1224 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PRU_2449 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pru00521]
D PRU_0241 glkA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_0395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_2364 ROK family domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1688 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1689 transcriptional regulator, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1071 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRU_1281 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D PRU_1146 inositol-1-monophosphatase/HD domain protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PRU_1543 nucleotidyltransferase family protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0229 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0173 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PRU_0085 rfbC_1; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PRU_0437 rfbC_2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PRU_0238 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PRU_0241 glkA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_0395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_2364 ROK family domain protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1688 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1689 transcriptional regulator, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D PRU_1690 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:pru00525]
D PRU_1543 nucleotidyltransferase family protein K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0229 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PRU_0173 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pru00401]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_0388 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_2906 aminotransferase, class I/II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PRU_1455 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PRU_1456 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PRU_0675 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PRU_0297 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PRU_2562 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pru00999]
D PRU_2294 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PRU_2786 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2590 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1956 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1167 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_0416 bglX; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2693 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2730 putative 1,4-beta-xylosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1940 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2312 glycosyl hydrolase, family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_1812 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PRU_2655 glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D PRU_1644 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PRU_1643 putative biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PRU_1232 putative biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pru03020]
D PRU_2135 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PRU_2134 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PRU_2088 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pru03010]
D PRU_1215 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PRU_2636 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PRU_2109 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PRU_2089 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PRU_2098 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PRU_0616 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PRU_2132 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PRU_2101 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PRU_2635 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PRU_2130 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PRU_2090 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PRU_2133 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PRU_2091 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PRU_2102 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PRU_0124 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PRU_1519 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PRU_2106 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PRU_0617 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PRU_2111 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PRU_2339 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PRU_2150 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PRU_2138 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PRU_2112 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PRU_2115 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PRU_2114 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PRU_2103 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PRU_2100 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PRU_2136 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PRU_0618 rpL9; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PRU_2137 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PRU_2139 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PRU_2634 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PRU_2105 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PRU_2096 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PRU_2108 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PRU_2087 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PRU_2099 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PRU_1925 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PRU_0596 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PRU_0702 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PRU_2110 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PRU_2113 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PRU_2104 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PRU_0248 rplY; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D PRU_0701 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PRU_0748 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PRU_2107 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PRU_2097 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PRU_1346 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PRU_2937 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PRU_0749 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PRU_2238 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PRU_0595 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PRU_2092 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PRU_0639 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_2930 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_2195 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_0182 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_0185 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_0642 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_2933 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_2192 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_0186 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_0643 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_2934 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_2191 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pru00970]
D PRU_0641 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_2932 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_0184 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_2193 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_1221 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_1222 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_1074 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_0289 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_2306 tRNA-OTHER K14219 tRNA-Arg; tRNA Arg
D PRU_2367 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PRU_0893 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRU_0892 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRU_0461 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PRU_2300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRU_0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRU_0769 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRU_0770 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRU_2338 tRNA-OTHER K14224 tRNA-Glu; tRNA Glu
D PRU_0883 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_0886 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_2145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_0978 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_0536 tRNA-His K14226 tRNA-His; tRNA His
D PRU_0183 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_0640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_2931 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_2194 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_2759 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_2391 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0884 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRU_0909 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRU_1866 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRU_1910 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRU_0295 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRU_2616 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRU_0312 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PRU_2266 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRU_1904 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRU_0464 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRU_0292 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_1823 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_1032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_0768 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_0977 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_2144 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_2147 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_0189 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_2142 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PRU_1555 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRU_2146 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRU_0037 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRU_0057 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRU_2167 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PRU_1373 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PRU_0009 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PRU_1439 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRU_0054 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PRU_2876 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PRU_0593 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PRU_0700 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PRU_2836 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PRU_2535 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PRU_0234 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PRU_1414 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PRU_2527 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRU_1069 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PRU_1691 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PRU_2401 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRU_1061 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PRU_0984 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRU_0582 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PRU_0820 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PRU_2299 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRU_0558 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pru03060]
D PRU_2095 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D PRU_2141 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D PRU_1556 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PRU_2305 secDF; protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D PRU_0246 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D PRU_1442 inner-membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRU_0865 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRU_1153 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PRU_0751 ftsY; recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRU_2498 tatA; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PRU_2499 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D PRU_2448 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PRU_1067 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PRU_2122 conserved hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D PRU_0399 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:pru03018]
D PRU_1102 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRU_2633 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PRU_2753 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PRU_2639 ATP-dependent RNA helicase, DEAD box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PRU_0554 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0991 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0031 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0900 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PRU_0225 KH/HDIG domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_0064 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PRU_0307 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRU_1853 polyA polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pru03030]
D PRU_0838 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1188 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_2813 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1896 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRU_1618 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRU_1701 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRU_0540 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRU_0839 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRU_0834 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PRU_1995 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PRU_0958 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PRU_0881 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PRU_2400 conserved domain protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PRU_2378 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PRU_2485 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRU_0567 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:pru03410]
D PRU_1406 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PRU_2354 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PRU_2000 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PRU_1657 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PRU_2485 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRU_0555 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRU_0567 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:pru03420]
D PRU_1607 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PRU_1647 uvrA_2; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D PRU_1453 uvrA_1; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D PRU_1356 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D PRU_2479 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D PRU_0995 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRU_2485 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRU_0567 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:pru03430]
D PRU_2504 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PRU_0293 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D PRU_0036 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PRU_0995 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRU_0168 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PRU_0167 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PRU_0555 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRU_0881 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PRU_1896 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRU_0839 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRU_1618 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRU_0540 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRU_1701 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRU_0838 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1188 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_2813 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_0567 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PRU_1005 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:pru03440]
D PRU_0555 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRU_0881 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PRU_0201 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PRU_2337 putative DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PRU_0897 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PRU_0066 recA; RecA protein K03553 recA; recombination protein RecA
D PRU_2485 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRU_2041 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PRU_2468 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PRU_0827 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PRU_1944 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_1009 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_0534 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_0144 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_1058 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_1896 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRU_0839 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRU_1618 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRU_0540 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRU_1701 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRU_0838 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1188 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_2813 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_2170 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
D PRU_0634 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PRU_1806 peptidase, S9B (dipeptidyl-peptidase IV) subfamily K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pru02010]
D PRU_2731 putative polyamine ABC transporter, periplasmic polyamine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PRU_1284 Mce-like protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PRU_0026 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PRU_0025 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PRU_1636 amino acid ABC transporter, ATP-binding protein/permease protein, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D PRU_1301 putative ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PRU_2292 putative permease K09808 lolC_E; lipoprotein-releasing system permease protein
D PRU_0052 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PRU_1912 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D PRU_0844 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D PRU_0027 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PRU_1835 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PRU_0481 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PRU_2913 msbA; lipid A export permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
D PRU_1291 sugar transporter, PTS galactitol (Gat) family, IIC component K02775 gatC; galactitol PTS system EIIC component
C 03070 Bacterial secretion system [PATH:pru03070]
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2305 secDF; protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D PRU_2141 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D PRU_1556 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PRU_2095 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D PRU_0246 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D PRU_1442 inner-membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRU_0865 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRU_0751 ftsY; recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRU_1153 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PRU_2498 tatA; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PRU_2499 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pru02020]
D PRU_0614 rprX; sensor histidine kinase RprX K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PRU_2319 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PRU_1283 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PRU_1817 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PRU_2935 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D PRU_1070 dcuB; anaerobic C4-dicarboxylate membrane transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PRU_1975 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D PRU_1416 glnA_1; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1957 glnA_2; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2071 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2855 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PRU_2348 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D PRU_0658 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D PRU_1261 putative cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PRU_1262 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1779 lipoprotein, polysaccharide biosynthesis/export family K01991 wza; polysaccharide biosynthesis/export protein
D PRU_1330 polysaccharide export protein, outer membrane auxiliary (OMA) family K01991 wza; polysaccharide biosynthesis/export protein
D PRU_0901 putative low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PRU_1331 chain length determinant family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PRU_1781 chain length determinant family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PRU_1368 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PRU_0012 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D PRU_1101 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D PRU_2516 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_1856 glycosyl hydrolase, family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_2222 cellulase domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_2231 endo-1,4-beta-xylanase/cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D PRU_2159 RNA polymerase sigma-70 factor, ECF family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pru02024]
D PRU_0125 luxS; autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D PRU_1455 trpE; anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PRU_1456 trpG; anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PRU_0496 putative pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D PRU_1303 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_2490 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1302 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1726 carbohydrate esterase, family 7/glycosyl hydrolase, family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D PRU_2399 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PRU_1847 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PRU_1442 inner-membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRU_2305 secDF; protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D PRU_2141 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D PRU_1556 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PRU_2095 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D PRU_0246 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D PRU_0865 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRU_0751 ftsY; recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRU_1153 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D PRU_2348 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
C 02040 Flagellar assembly [PATH:pru02040]
D PRU_1021 putative RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PRU_0331 RNA polymerase sigma-70 factor family protein K03086 rpoD; RNA polymerase primary sigma factor
D PRU_0346 putative sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_0386 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_1220 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_1794 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_2855 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PRU_1102 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pru04980]
D PRU_2190 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PRU_0160 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D PRU_1639 mutB; methylmalonyl-CoA mutase, large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_1640 mutA; methylmalonyl-CoA mutase, small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PRU_0799 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:pru01501]
D PRU_1564 putative transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PRU_0656 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PRU_2128 TonB family protein K02172 blaR1; bla regulator protein blaR1
D PRU_2129 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PRU_1849 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_0265 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_1847 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0638 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_0704 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_1705 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PRU_2327 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:pru01502]
D PRU_1817 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PRU_2235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRU_0131 alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PRU_2263 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PRU_2329 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PRU_2332 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pru01503]
D PRU_1285 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_1849 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_0265 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0706 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pru01000]
C 01001 Protein kinases [BR:pru01001]
D PRU_2237 PASTA domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PRU_2420 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_1495 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_1968 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_0523 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_2624 serine-protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PRU_0024 serine-protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PRU_1331 chain length determinant family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PRU_1781 chain length determinant family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PRU_1383 conserved hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PRU_0614 rprX; sensor histidine kinase RprX K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PRU_2319 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PRU_2935 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D PRU_2347 sensor histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
D PRU_0888 sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pru01009]
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_1216 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PRU_0608 protein phosphatase 1 K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D PRU_1999 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pru01002]
D PRU_1067 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PRU_0548 pepC; bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PRU_1678 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PRU_1973 glutamine amidotransferase, class-II domain protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRU_0553 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRU_1960 gltA_2; glutamate synthase (NADPH), large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D PRU_0891 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PRU_1978 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PRU_1942 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D PRU_1410 putative lipoprotein K21470 ycbB; L,D-transpeptidase YcbB
D PRU_2618 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D PRU_0685 dcp; peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PRU_0196 putative oligopeptidase A K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D PRU_0120 putative peptidase K09607 ina; immune inhibitor A [EC:3.4.24.-]
D PRU_0603 pepO_1; endopeptidase PepO K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PRU_2572 pepO_2; endopeptidase PepO K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PRU_1484 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_0152 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_2772 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_0221 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_2032 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_2898 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_1817 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PRU_2293 peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D PRU_0258 pepT; tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PRU_0766 pepD_1; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PRU_1551 pepD_2; Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D PRU_2094 map_2; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PRU_0745 map_1; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PRU_0557 peptidase, M24B subfamily K14213 PEPD; Xaa-Pro dipeptidase [EC:3.4.13.9]
D PRU_2157 peptidase, M24B subfamily K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PRU_0044 putative ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PRU_0989 peptidase, M49 (dipeptidyl-peptidase III) family K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D PRU_2924 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PRU_2128 TonB family protein K02172 blaR1; bla regulator protein blaR1
D PRU_2009 putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D PRU_0634 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PRU_1806 peptidase, S9B (dipeptidyl-peptidase IV) subfamily K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PRU_0828 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRU_1998 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PRU_0029 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PRU_0842 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PRU_0924 umuD_1; prophage PRU01, umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PRU_1185 umuD_2; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PRU_2448 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PRU_2122 conserved hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D PRU_1316 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PRU_2368 peptidase, S41A family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PRU_2476 peptidase, S41A family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PRU_0198 peptidase, S41A family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PRU_0011 mdsD_1; mucin-desulfating sulfatase K08676 tri; tricorn protease [EC:3.4.21.-]
D PRU_1095 mdsD_2; mucin-desulfating sulfatase K08676 tri; tricorn protease [EC:3.4.21.-]
D PRU_0308 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D PRU_2303 rhomboid family protein K07059 K07059; rhomboid family protein
D PRU_2079 peptidase, U61 family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PRU_2505 peptidase, U61 family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PRU_2846 prtC; collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D PRU_0610 peptidase, U32 family K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
C 01003 Glycosyltransferases [BR:pru01003]
D PRU_1610 glycosyltransferase, group 2 family K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PRU_1660 glycosyltransferase, group 1 family K16150 K16150; glycogen synthase [EC:2.4.1.11]
D PRU_0992 glycogen synthase-like protein K00703 glgA; starch synthase [EC:2.4.1.21]
D PRU_1042 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PRU_0638 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_0704 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_0112 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_0113 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pru01005]
D PRU_0706 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PRU_0019 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PRU_0707 UDP-3-0-acyl N-acetylglucosamine deacetylase/beta-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PRU_0708 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PRU_2253 LpxH family protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PRU_0309 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PRU_2910 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PRU_2166 putative glycosyl transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PRU_1626 kdsA_2; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PRU_0445 kdsA_1; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PRU_1308 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PRU_1206 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PRU_1627 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PRU_0446 sugar isomerase, KpsF/GutQ family K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PRU_2545 sulfatase family protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D PRU_2903 glycosyltransferase, group 2 family K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PRU_0112 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_0113 glycosyl transferase family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PRU_1755 NAD dependent epimerase/dehydratase family protein K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
D PRU_0452 putative polysaccharide biosynthesis protein K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pru01011]
D PRU_2927 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRU_0584 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PRU_2333 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PRU_2330 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PRU_2328 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PRU_0131 alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PRU_2235 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRU_2287 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PRU_2079 peptidase, U61 family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PRU_2505 peptidase, U61 family K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PRU_2329 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PRU_2332 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PRU_1833 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PRU_0762 PAP2 domain protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PRU_0638 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_0704 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRU_1705 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PRU_2327 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PRU_0828 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRU_1998 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PRU_1042 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PRU_1410 putative lipoprotein K21470 ycbB; L,D-transpeptidase YcbB
D PRU_1817 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PRU_1484 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_0152 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_2772 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_0221 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_2032 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_2898 conserved hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D PRU_0014 transglycosylase SLT/LysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D PRU_0391 transglycosylase SLT domain protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D PRU_1372 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PRU_2085 rare lipoprotein A family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PRU_1285 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:pru01004]
D PRU_0675 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PRU_2938 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PRU_2561 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PRU_0297 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRU_0707 UDP-3-0-acyl N-acetylglucosamine deacetylase/beta-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PRU_2205 AMP-binding enzyme K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PRU_0157 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D PRU_1303 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_2490 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1302 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1611 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:pru01006]
D PRU_1825 idsA; short chain isoprenyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PRU_2484 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PRU_2282 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PRU_1663 miaA_2; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PRU_0705 miaA_1; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PRU_1360 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PRU_1405 prenyltransferase, UbiA family K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:pru01007]
D PRU_2167 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PRU_1373 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PRU_2299 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRU_0558 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PRU_2836 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PRU_2401 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRU_2535 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PRU_1069 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PRU_1414 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PRU_2527 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRU_1691 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PRU_1439 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRU_0054 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PRU_0984 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRU_2876 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PRU_0700 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PRU_1061 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PRU_0593 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PRU_0009 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PRU_0582 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PRU_0820 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PRU_1914 aatA; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1300 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PRU_1974 aminotransferase-like protein K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PRU_1173 aminotransferase, class I/II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PRU_0388 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_2906 aminotransferase, class I/II K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PRU_0463 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PRU_2309 aminotransferase, class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRU_2201 argD; acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PRU_0166 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PRU_1038 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:pru00194]
D PRU_1198 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PRU_1199 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PRU_1191 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PRU_1192 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PRU_1193 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PRU_1194 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PRU_1195 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PRU_1196 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pru03000]
D PRU_0938 prophage PRU01, DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0361 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0362 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0666 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_2352 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PRU_0264 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PRU_1566 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D PRU_1237 transcriptional regulator, LysR family K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D PRU_0874 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PRU_1797 transcriptional regulator, lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PRU_2764 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PRU_2666 transcriptional regulator, lacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D PRU_1818 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PRU_2863 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PRU_2790 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PRU_2789 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PRU_2387 putative transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PRU_0987 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PRU_0195 cyclic nucleotide-binding domain protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D PRU_2179 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D PRU_2129 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PRU_1891 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PRU_0570 DNA-binding protein K07727 K07727; putative transcriptional regulator
D PRU_0016 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRU_2197 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PRU_1068 conserved hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D PRU_2324 putative mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:pru03021]
D PRU_2088 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PRU_2135 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PRU_2134 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PRU_1021 putative RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PRU_0331 RNA polymerase sigma-70 factor family protein K03086 rpoD; RNA polymerase primary sigma factor
D PRU_0346 putative sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_0386 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_1220 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_1794 RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D PRU_2434 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PRU_2620 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PRU_2159 RNA polymerase sigma-70 factor, ECF family K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D PRU_2855 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PRU_2370 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PRU_0247 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PRU_2140 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D PRU_0849 IcfG-like protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PRU_2613 HAMP/SpoIIE domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PRU_2848 cache/HAMP/SpoIIE domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PRU_2209 SpoIIE domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PRU_0598 cache/SpoIIE domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PRU_0281 sporulation family protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PRU_0597 putative anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D PRU_2623 putative anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D PRU_2624 serine-protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PRU_0024 serine-protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PRU_1068 conserved hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D PRU_0487 transcription elongation factor GreA family protein K03624 greA; transcription elongation factor GreA
D PRU_2756 transcription elongation factor GreA family protein K03624 greA; transcription elongation factor GreA
D PRU_0900 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:pru03019]
D PRU_0682 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D PRU_2560 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PRU_0225 KH/HDIG domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PRU_2753 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PRU_2639 ATP-dependent RNA helicase, DEAD box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PRU_0554 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0991 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0031 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_1102 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRU_2633 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PRU_0900 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PRU_1201 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PRU_0064 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PRU_0307 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRU_1853 polyA polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:pru03011]
D PRU_1215 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PRU_2636 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PRU_2109 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PRU_2089 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PRU_2098 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PRU_0616 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PRU_2132 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PRU_2101 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PRU_2635 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PRU_2130 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PRU_2090 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PRU_2133 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PRU_2091 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PRU_2102 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PRU_0124 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PRU_1519 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PRU_2106 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PRU_0617 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PRU_2111 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PRU_2339 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PRU_2150 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PRU_2138 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PRU_2112 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PRU_2115 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PRU_2114 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PRU_2103 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PRU_2100 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PRU_0618 rpL9; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PRU_2137 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PRU_2139 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PRU_2136 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PRU_2634 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PRU_2105 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PRU_2096 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PRU_2108 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PRU_2087 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PRU_2099 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PRU_1925 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PRU_0596 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PRU_0702 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PRU_2110 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PRU_2113 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PRU_2104 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PRU_0701 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PRU_0748 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PRU_2107 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PRU_2097 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PRU_1346 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PRU_2937 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PRU_0749 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PRU_2238 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PRU_0595 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PRU_2092 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PRU_0248 rplY; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D PRU_0186 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_0643 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_2934 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_2191 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_0639 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_2930 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_2195 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_0182 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_0185 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_0642 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_2933 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_2192 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pru03009]
D PRU_2560 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PRU_2939 era; GTP-binding protein Era K03595 era; GTPase
D PRU_2870 GTP-binding protein, GTP1/OBG family K03979 obgE; GTPase [EC:3.6.5.-]
D PRU_1068 conserved hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D PRU_2370 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PRU_0247 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PRU_2140 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D PRU_1549 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PRU_1993 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PRU_1064 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PRU_1653 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PRU_2325 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PRU_1869 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PRU_0727 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PRU_0904 PUA domain protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PRU_1805 THUMP domain protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D PRU_1562 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PRU_1513 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PRU_2661 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PRU_0055 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PRU_2236 ribosomal large subunit pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRU_1362 RNA pseudouridine synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRU_0298 RNA pseudouridine synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRU_2926 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D PRU_0752 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PRU_1028 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PRU_0682 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D PRU_0590 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PRU_2639 ATP-dependent RNA helicase, DEAD box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PRU_0075 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PRU_2940 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D PRU_0115 GTP-binding protein K03665 hflX; GTPase
D PRU_0236 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PRU_1210 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PRU_0013 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PRU_2291 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PRU_2369 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D PRU_0043 iojap-like protein K09710 ybeB; ribosome-associated protein
D PRU_2148 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D PRU_2502 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D PRU_2936 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:pru03016]
D PRU_1411 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PRU_2167 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PRU_1061 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PRU_1069 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PRU_2527 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRU_2535 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PRU_1373 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D PRU_2401 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRU_1691 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PRU_1439 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRU_0009 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PRU_0054 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PRU_2876 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PRU_0593 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PRU_0700 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PRU_2836 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PRU_1414 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PRU_0984 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRU_0582 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PRU_0820 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PRU_2299 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRU_0558 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PRU_2480 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PRU_0678 class-II aminoacyl-tRNA synthetase family K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D PRU_2757 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PRU_0163 putative tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PRU_2064 probable methyltransferase, YaeB/AF_0241 family K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D PRU_1253 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PRU_1832 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PRU_0077 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D PRU_0236 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PRU_1663 miaA_2; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PRU_0705 miaA_1; tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PRU_0695 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PRU_2477 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PRU_2297 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PRU_0691 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PRU_1890 cytidine/deoxycytidylate deaminase zinc-binding domain protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PRU_2465 putative TIM-barrel protein, NifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PRU_2914 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PRU_0629 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PRU_0564 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PRU_0841 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PRU_0794 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D PRU_0127 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D PRU_2661 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D PRU_0698 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D PRU_1831 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PRU_0763 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PRU_2594 protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D PRU_0253 GTP cyclohydrolase family protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D PRU_1154 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D PRU_0843 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PRU_0903 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PRU_2929 peptidase, M22 family K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PRU_0746 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PRU_1898 ATPase, YjeE family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PRU_2825 ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D PRU_2753 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PRU_2633 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:pru03012]
D PRU_2371 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PRU_0594 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PRU_0602 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PRU_2637 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PRU_2143 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D PRU_2131 fusA; translation elongation factor G K02355 fusA; elongation factor G
D PRU_0613 putative translation elongation factor G K02355 fusA; elongation factor G
D PRU_0711 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PRU_0074 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PRU_2398 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PRU_0249 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PRU_2093 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PRU_2239 efp; translation elongation factor P K02356 efp; elongation factor P
D PRU_2491 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PRU_0237 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:pru03110]
D PRU_0040 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D PRU_0121 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PRU_0812 clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PRU_0030 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PRU_1216 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PRU_0064 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PRU_0307 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRU_0429 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PRU_1309 DnaJ family protein K05516 cbpA; curved DNA-binding protein
D PRU_1204 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D PRU_0430 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PRU_1606 heat shock protein, class I K13993 HSP20; HSP20 family protein
D PRU_0957 heat shock protein, class I K13993 HSP20; HSP20 family protein
D PRU_0414 heat shock protein K13993 HSP20; HSP20 family protein
D PRU_0250 heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D PRU_0306 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D PRU_0044 putative ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PRU_1196 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PRU_1145 conserved hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D PRU_1156 glycosyl hydrolase, family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_1157 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PRU_0859 peptidyl-prolyl cis-trans isomerase-like protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PRU_2860 fklB; peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa subunit K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PRU_0545 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PRU_0034 peptidylprolyl isomerase domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PRU_0033 peptidylprolyl isomerase domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PRU_1897 trx; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pru04131]
D PRU_2181 glycosyl hydrolase, family 38/DS domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D PRU_1674 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRU_0684 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRU_1216 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:pru03051]
D PRU_1216 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:pru03032]
D PRU_2400 conserved domain protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PRU_0938 prophage PRU01, DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0361 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0362 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0666 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_2302 DNA-binding protein, HU family K03530 hupB; DNA-binding protein HU-beta
D PRU_0683 DNA-binding protein, HU family K03530 hupB; DNA-binding protein HU-beta
D PRU_1283 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PRU_0834 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PRU_1995 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PRU_0958 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PRU_0881 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PRU_1896 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRU_0839 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRU_0540 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRU_1701 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRU_0838 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1188 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_2813 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1618 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRU_2378 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PRU_2485 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRU_0567 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PRU_1005 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PRU_0813 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PRU_2340 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PRU_0008 topoisomerase gyrA/parC subunit family protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PRU_2475 type II topoisomerase family protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PRU_2627 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PRU_1269 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:pru03036]
D PRU_0938 prophage PRU01, DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0361 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0362 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0666 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_2560 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PRU_2302 DNA-binding protein, HU family K03530 hupB; DNA-binding protein HU-beta
D PRU_0683 DNA-binding protein, HU family K03530 hupB; DNA-binding protein HU-beta
D PRU_1309 DnaJ family protein K05516 cbpA; curved DNA-binding protein
D PRU_1283 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PRU_2790 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PRU_2335 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PRU_0481 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PRU_2327 pbpB; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D PRU_0906 prophage PRU01, FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PRU_2334 putative cell division protein K03589 ftsQ; cell division protein FtsQ
D PRU_2331 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D PRU_1835 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PRU_2336 ftsZ_3; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_0138 ftsZ_1; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_2003 ftsZ_2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_1285 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_1849 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_0265 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_1708 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PRU_1707 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D PRU_1704 cell cycle protein, FtsW/RodA/SpoVE family K05837 rodA; rod shape determining protein RodA
D PRU_0017 ATPase, ParA family K03496 parA; chromosome partitioning protein
D PRU_0016 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRU_0008 topoisomerase gyrA/parC subunit family protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PRU_2475 type II topoisomerase family protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PRU_2477 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PRU_1653 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PRU_2149 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D PRU_2288 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D PRU_0164 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PRU_2521 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PRU_0380 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PRU_0899 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:pru03400]
D PRU_2354 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PRU_2000 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PRU_1406 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PRU_0662 mutT_1; mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PRU_0340 nudF; ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PRU_0664 mutT_2; mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PRU_2916 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PRU_1657 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PRU_0555 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRU_0567 ligA; DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PRU_2485 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRU_1647 uvrA_2; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D PRU_1453 uvrA_1; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D PRU_1356 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D PRU_2479 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D PRU_0995 putative ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRU_2135 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PRU_2134 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PRU_2088 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PRU_1607 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PRU_2504 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PRU_0293 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D PRU_0036 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PRU_0168 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PRU_0167 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PRU_1896 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRU_0839 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRU_0540 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRU_1701 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRU_0838 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1188 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_2813 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRU_1618 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRU_0881 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PRU_1005 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PRU_0358 DNA mismatch endonuclease Vsr family protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D PRU_0066 recA; RecA protein K03553 recA; recombination protein RecA
D PRU_2041 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PRU_2468 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PRU_0827 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PRU_2170 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PRU_1745 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D PRU_1633 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PRU_0201 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PRU_1944 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_1009 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_0534 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_0144 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_1058 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRU_2337 putative DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PRU_0897 recR; recombination protein RecR K06187 recR; recombination protein RecR
D PRU_0836 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PRU_0374 UvrD/Rep helicase family protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PRU_1947 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D PRU_0813 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PRU_2340 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PRU_2627 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PRU_2302 DNA-binding protein, HU family K03530 hupB; DNA-binding protein HU-beta
D PRU_0683 DNA-binding protein, HU family K03530 hupB; DNA-binding protein HU-beta
D PRU_0554 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0991 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0031 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRU_0499 putative DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PRU_0925 prophage PRU01, ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V
D PRU_0508 ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V
D PRU_1186 ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V
D PRU_0924 umuD_1; prophage PRU01, umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PRU_1185 umuD_2; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PRU_2397 regulatory protein RecX K03565 recX; regulatory protein
D PRU_0302 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:pru03029]
D PRU_2371 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PRU_0594 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PRU_2637 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PRU_2143 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D PRU_2131 fusA; translation elongation factor G K02355 fusA; elongation factor G
D PRU_0613 putative translation elongation factor G K02355 fusA; elongation factor G
D PRU_2939 era; GTP-binding protein Era K03595 era; GTPase
D PRU_2299 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRU_2527 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRU_1439 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRU_2876 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PRU_2401 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRU_2874 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D PRU_2774 Toprim domain protein K17680 PEO1; twinkle protein [EC:5.6.2.3]
D PRU_0881 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PRU_2283 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D PRU_0064 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PRU_0430 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PRU_0307 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRU_0306 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D PRU_0429 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PRU_0164 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PRU_1442 inner-membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRU_1216 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pru02000]
D PRU_2913 msbA; lipid A export permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PRU_1121 peptide ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PRU_0714 peptide ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PRU_2120 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PRU_0898 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D PRU_2731 putative polyamine ABC transporter, periplasmic polyamine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PRU_2402 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PRU_1632 putative lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PRU_0848 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PRU_2612 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PRU_2847 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D PRU_1420 putative membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D PRU_1419 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D PRU_1284 Mce-like protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D PRU_0026 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PRU_0025 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PRU_1636 amino acid ABC transporter, ATP-binding protein/permease protein, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D PRU_1091 putative iron compound ABC transporter, periplasmic iron compound-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PRU_2510 ABC transporter, periplasmic substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D PRU_2568 iron compound ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D PRU_1090 iron compound ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D PRU_2512 iron compound ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D PRU_1912 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D PRU_0844 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D PRU_0027 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PRU_1301 putative ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PRU_2292 putative permease K09808 lolC_E; lipoprotein-releasing system permease protein
D PRU_0052 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PRU_1835 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D PRU_0481 ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PRU_1256 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PRU_1255 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PRU_1938 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PRU_0866 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PRU_1509 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PRU_1980 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_1981 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_1932 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_1933 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_2059 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_1983 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_1985 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PRU_1934 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PRU_2058 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PRU_1979 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PRU_2374 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PRU_2269 transporter, divalent anion:sodium symporter (DASS) family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D PRU_0038 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D PRU_0170 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D PRU_1326 putative MATE efflux protein K26937 dinF; MATE family, multidrug efflux pump
D PRU_1620 xylE; D-xylose:proton symporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D PRU_1466 sugar transporter, sugar porter (SP) family K06610 iolF; MFS transporter, SP family, inositol transporter
D PRU_2052 sugar transporter, fucose:hydrogen symporter (FHS) family K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PRU_0426 sugar transporter, fucose:hydrogen symporter (FHS) family K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PRU_2839 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PRU_2366 sugar transporter, fucose:hydrogen symporter (FHS) family K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PRU_1289 transporter, anion:cation symporter (ACS) family K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D PRU_1564 putative transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D PRU_0502 putative membrane protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PRU_1291 sugar transporter, PTS galactitol (Gat) family, IIC component K02775 gatC; galactitol PTS system EIIC component
D PRU_2051 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D PRU_1976 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D PRU_0759 putative BatA protein K07114 yfbK; Ca-activated chloride channel homolog
D PRU_0760 putative BatB/BatC protein K07114 yfbK; Ca-activated chloride channel homolog
D PRU_1675 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D PRU_1625 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D PRU_1012 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D PRU_1915 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PRU_1822 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D PRU_1552 metal ion transporter, CorA family K03284 corA; magnesium transporter
D PRU_0860 CBS/transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PRU_0880 gliding motility protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PRU_0003 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PRU_0208 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D PRU_1829 conserved hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D PRU_2506 transporter, outer membrane receptor (OMR) family K16092 btuB; vitamin B12 transporter
D PRU_1282 transporter, outer membrane receptor (OMR) family K16092 btuB; vitamin B12 transporter
D PRU_2681 outer membrane protein SusC K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_2225 putative TonB dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_1462 putative outer membrane protein SusC K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_1591 putative receptor antigen RagA K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_2445 putative receptor antigen RagA K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_1677 putative TonB dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_2669 putative receptor antigen RagA K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_2704 putative TonB dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_2708 putative receptor antigen RagA K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_1950 putative receptor antigen RagA K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_0272 putative receptor antigen RagA K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PRU_1085 transporter, outer membrane receptor (OMR) family K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PRU_1083 transporter, outer membrane receptor (OMR) family K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PRU_2488 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PRU_1103 TonB-dependent heme receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PRU_2833 transporter, outer membrane receptor (OMR) family K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PRU_2551 TonB dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PRU_1160 TonB dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1847 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PRU_1779 lipoprotein, polysaccharide biosynthesis/export family K01991 wza; polysaccharide biosynthesis/export protein
D PRU_1330 polysaccharide export protein, outer membrane auxiliary (OMA) family K01991 wza; polysaccharide biosynthesis/export protein
D PRU_2283 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D PRU_1355 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D PRU_2667 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family K16211 malY; maltose/moltooligosaccharide transporter
D PRU_0279 ZIP zinc transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family
D PRU_1252 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PRU_1132 anaerobic transporter, C4-dicarboxylate uptake (Dcu) family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D PRU_1070 dcuB; anaerobic C4-dicarboxylate membrane transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D PRU_1602 transporter, lactate permease (LctP) family K03303 lutP; lactate permease
D PRU_0251 K+-dependent Na+/Ca+ exchanger-like protein K07301 yrbG; cation:H+ antiporter
D PRU_1448 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D PRU_0257 cation transporter, monovalent cation:proton antiporter-2 (CPA2) family K26735 KEA4_5_6; K+:H+ antiporter
D PRU_0051 cation transporter, monovalent cation:proton antiporter-2 (CPA2) family K26730 napA; Na+:H+ antiporter
D PRU_2881 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D PRU_2882 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D PRU_0694 uraA; uracil permease K02824 uraA; uracil permease
D PRU_2373 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D PRU_0850 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D PRU_0235 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D PRU_2664 chromate transport protein K07240 chrA; chromate transporter
D PRU_2665 chromate transport protein K07240 chrA; chromate transporter
D PRU_1655 sulfate transporter, sulfate permease (SulP) family K03321 TC.SULP; sulfate permease, SulP family
D PRU_1240 transporter, phosphate:sodium symporter (PNaS) family K03324 yjbB; phosphate:Na+ symporter
D PRU_2487 transporter, phosphate:sodium symporter (PNaS) family K03324 yjbB; phosphate:Na+ symporter
D PRU_2923 auxin efflux carrier family protein K24180 mleP; malate permease and related proteins
D PRU_0494 amino acid transporter, branched chain amino acid exporter (LIV-E) family K26605 azlC; branched chain amino acid efflux pump
D PRU_0495 conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D PRU_0252 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D PRU_2331 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D PRU_1918 TonB family protein K03832 tonB; periplasmic protein TonB
D PRU_1826 TonB family protein K03832 tonB; periplasmic protein TonB
D PRU_1273 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D PRU_0830 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D PRU_1644 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D PRU_1231 carboxyl transferase domain protein K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D PRU_1643 putative biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PRU_1232 putative biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D PRU_0501 transporter, MFP family K03543 emrA; membrane fusion protein, multidrug efflux system
D PRU_0319 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D PRU_1849 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_0265 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_1383 conserved hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D PRU_1331 chain length determinant family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PRU_1781 chain length determinant family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PRU_0155 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1887 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1463 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2709 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1889 conserved domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2273 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2670 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2229 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2187 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2737 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1569 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2439 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2713 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2828 lipoprotein, putative K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2696 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1590 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1676 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1597 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2703 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2073 tetratricopeptide repeat protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2224 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2444 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2611 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2682 outer membrane protein, SusD K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_0273 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1951 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_1875 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2227 putative lipoprotein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2735 conserved hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PRU_2489 putative nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D PRU_0867 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D PRU_2657 MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:pru02044]
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0197 cytidine/deoxycytidylate deaminase zinc-binding domain protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PRU_2922 ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
D PRU_0865 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRU_2305 secDF; protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D PRU_2141 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D PRU_1556 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D PRU_2095 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D PRU_1153 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PRU_0751 ftsY; recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRU_0246 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D PRU_1442 inner-membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRU_2498 tatA; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D PRU_2499 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:pru02042]
D PRU_0860 CBS/transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PRU_0880 gliding motility protein GldE K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PRU_2761 hly-III; hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:pru02022]
D PRU_0614 rprX; sensor histidine kinase RprX K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PRU_2319 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PRU_2935 sensor histidine kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D PRU_2802 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D PRU_2083 putative DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D PRU_2347 sensor histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS
D PRU_0888 sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:pru02035]
D PRU_2348 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pru04812]
D PRU_0573 conserved hypothetical protein K06990 MEMO1; MEMO1 family protein
D PRU_1708 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PRU_2336 ftsZ_3; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_0138 ftsZ_1; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_2003 ftsZ_2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_2335 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PRU_0017 ATPase, ParA family K03496 parA; chromosome partitioning protein
D PRU_0016 ParB-like protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:pru04147]
D PRU_1216 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D PRU_1102 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRU_1674 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRU_1634 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PRU_0684 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRU_0307 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRU_0064 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D PRU_1785 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRU_0634 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PRU_1806 peptidase, S9B (dipeptidyl-peptidase IV) subfamily K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PRU_0032 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PRU_2143 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D PRU_2757 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PRU_1303 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_2490 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_1302 AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PRU_2869 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PRU_2478 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PRU_2393 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PRU_2199 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PRU_1164 alpha-L-fucosidase family protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PRU_1166 DS domain protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PRU_2780 glycosyl hydrolase, family 29 K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D PRU_0425 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PRU_1305 putative 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PRU_1416 glnA_1; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1957 glnA_2; glutamine synthetase, type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_2071 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRU_1852 putative alpha-N-acetylglucosaminidase K01205 NAGLU; alpha-N-acetylglucosaminidase [EC:3.2.1.50]
D PRU_1036 serA; D-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PRU_1927 putative phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PRU_2044 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRU_2036 etfA; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
C 02048 Prokaryotic defense system [BR:pru02048]
D PRU_1320 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D PRU_1321 csn1; CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D PRU_2890 putative type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PRU_2889 type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D PRU_2887 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PRU_1005 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PRU_1002 DNA (cytosine-5-)-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D PRU_0938 prophage PRU01, DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0361 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0362 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_0666 DNA methylase, C-5 cytosine-specific family K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D PRU_2420 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_1495 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_1968 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_0523 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D PRU_0962 conserved hypothetical protein K07334 higB-1; toxin HigB-1
D PRU_1323 putative addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D PRU_0963 putative virulence-associated protein K21498 higA-1; antitoxin HigA-1
D PRU_2336 ftsZ_3; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_0138 ftsZ_1; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_2003 ftsZ_2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRU_1708 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PRU_0008 topoisomerase gyrA/parC subunit family protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PRU_2475 type II topoisomerase family protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PRU_2167 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PRU_1004 conserved hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
D PRU_1052 conserved hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:pru04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:pru04090]
D PRU_0634 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D PRU_1806 peptidase, S9B (dipeptidyl-peptidase IV) subfamily K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:pru01504]
D PRU_2460 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PRU_0509 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PRU_2128 TonB family protein K02172 blaR1; bla regulator protein blaR1
D PRU_2129 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PRU_1817 putative D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D PRU_1849 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_0265 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D PRU_1847 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D PRU_1930 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0500 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_1987 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0267 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_2056 outer membrane efflux protein K12340 tolC; outer membrane protein
D PRU_0319 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pru00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pru03100]
D PRU_0641 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_2932 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_0184 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_2193 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRU_1221 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_1222 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_1074 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_0289 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRU_2306 tRNA-OTHER K14219 tRNA-Arg; tRNA Arg
D PRU_2367 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PRU_0893 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRU_0892 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRU_0461 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PRU_2300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRU_0042 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRU_0769 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRU_0770 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRU_2338 tRNA-OTHER K14224 tRNA-Glu; tRNA Glu
D PRU_0883 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_0886 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_2145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_0978 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRU_0536 tRNA-His K14226 tRNA-His; tRNA His
D PRU_0183 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_0640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_2931 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_2194 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRU_2759 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_2391 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0884 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRU_0910 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRU_0909 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRU_1866 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRU_1910 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRU_0295 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRU_2616 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRU_0312 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PRU_2266 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRU_1904 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRU_0464 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRU_0292 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_1823 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_1032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_0768 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRU_0977 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_2144 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_2147 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_0189 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRU_2142 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PRU_1555 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRU_2146 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRU_0037 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRU_0057 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRU_0639 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_2930 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_2195 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_0182 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRU_0185 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_0642 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_2933 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_2192 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRU_0186 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_0643 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_2934 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRU_2191 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PRU_2301 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D PRU_1473 oxidoreductase, aldo/keto reductase family K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PRU_0413 sulfatase-activating enzyme, ChuR family K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7]
D PRU_1025 putative indolepyruvate oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D PRU_1024 putative indolepyruvate oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D PRU_0088 octopine/opine/tauropine dehydrogenase-like protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D PRU_0466 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PRU_2409 bcp; thioredoxin-dependent thiol peroxidase Bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PRU_1365 nrdG_1; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PRU_2852 nrdG_2; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PRU_1244 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PRU_0572 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D PRU_2210 transcarbamylase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D PRU_2578 acetyltransferase, GNAT family K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D PRU_0039 aat; leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D PRU_1725 conserved hypothetical protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D PRU_2503 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PRU_0194 putative thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PRU_2261 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PRU_2599 sialic acid-specific 9-O-acetylesterase-like protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D PRU_2629 sialic acid-specific 9-O-acetylesterase-like protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D PRU_2747 conserved domain protein K25010 GE; (4-O-methyl)-D-glucuronate---lignin esterase [EC:3.1.1.117]
D PRU_1600 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PRU_0408 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D PRU_1498 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D PRU_2385 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PRU_0655 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PRU_2168 membrane-associated receptor K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D PRU_1824 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PRU_2728 glycosyl hydrolase, family 10/isoamylase domain/esterase family protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D PRU_1883 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D PRU_1929 glycosyl hydrolase, family 53 K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D PRU_2676 glycosyl hydrolase, family 53 K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D PRU_2673 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PRU_2701 glycosyl hydrolase, family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PRU_2672 putative arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PRU_2072 glycosyl hydrolase, family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D PRU_2700 neopullulanase K21575 susA; neopullulanase [EC:3.2.1.135]
D PRU_0081 putative alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D PRU_1268 glycosyl hydrolase, family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D PRU_2232 alpha-glucosidase family protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D PRU_1795 glycosyl hydrolase, family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D PRU_1865 putative alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D PRU_2745 glycosyl hydrolase, family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D PRU_1573 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_2428 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_0916 prophage PRU01, N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_1778 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_1845 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_0111 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_1130 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PRU_0591 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PRU_1811 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PRU_2834 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PRU_0756 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PRU_2867 carbohydrate kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PRU_1571 FG-GAP repeat domain protein K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D PRU_1723 conserved hypothetical protein K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D PRU_1471 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D PRU_2782 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D PRU_1532 conserved hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D PRU_0806 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D PRU_0805 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D PRU_0804 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D PRU_1250 nqrA; NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D PRU_1249 nqrB; NADH:ubiquinone oxidoreductase, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D PRU_1248 nqrC; NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D PRU_1247 nqrD; NADH:ubiquinone oxidoreductase, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D PRU_1246 nqrE; NADH:ubiquinone oxidoreductase, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D PRU_1245 nqrF; NADH:ubiquinone oxidoreductase, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D PRU_2007 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PRU_0260 cadA; cadmium-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PRU_0180 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PRU_0179 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PRU_0178 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D PRU_1097 conserved hypothetical protein K19824 fprB; rubrerythrin
D PRU_0807 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D PRU_0808 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D PRU_0809 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D PRU_2796 flavodoxin K03839 fldA; flavodoxin I
D PRU_1567 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH
D PRU_2037 etfB; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PRU_1297 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PRU_1550 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D PRU_1694 NADPH-dependent reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PRU_0600 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D PRU_0041 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PRU_0028 tig; trigger factor K03545 tig; trigger factor
D PRU_0798 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D PRU_2388 Mg-chelatase subunits D/I family, ComM subfamily protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D PRU_1695 methylated-DNA--[protein]-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PRU_0668 conserved domain protein K07454 K07454; putative restriction endonuclease
D PRU_2241 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D PRU_1949 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D PRU_0325 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D PRU_2206 conserved hypothetical protein K07460 yraN; putative endonuclease
D PRU_2463 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D PRU_0832 ATPase, AAA family K07478 ycaJ; putative ATPase
D PRU_0454 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D PRU_1523 conserved domain protein K07491 rayT; REP-associated tyrosine transposase
D PRU_1787 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PRU_2598 cation:sugar symporter, GPH family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PRU_1724 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PRU_2600 sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D PRU_1449 peptide transporter, proton-dependent oligopeptide transporter (POT) family K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PRU_0423 transporter, SSS family K03307 TC.SSS; solute:Na+ symporter, SSS family
D PRU_1264 transporter, SSS family K03307 TC.SSS; solute:Na+ symporter, SSS family
D PRU_2495 sodium-dependent symporter, NSS family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PRU_2496 sodium-dependent symporter, NSS family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D PRU_2406 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PRU_1855 transporter, alanine or glycine:cation symporter (AGCS) family K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D PRU_0471 sodium/bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PRU_1699 putative membrane protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D PRU_1641 transporter, aspartate:alanine exchanger (AAE) family K07085 K07085; putative transport protein
D PRU_0659 putative permease K07085 K07085; putative transport protein
C 99978 Cell growth
D PRU_1390 putative hexosyltransferase YtcC K06338 cotSA; spore coat protein SA
D PRU_0470 cfxQ domain protein K06413 spoVK; stage V sporulation protein K
D PRU_1664 ATPase, AAA family K06413 spoVK; stage V sporulation protein K
D PRU_2919 putative tolA protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D PRU_2018 putative tellurium resistance protein K05792 terA; tellurite resistance protein TerA
D PRU_2019 terD; tellurium resistance protein TerD K05795 terD; tellurium resistance protein TerD
D PRU_2017 putative tellurium resistance protein K05791 terZ; tellurium resistance protein TerZ
D PRU_0123 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D PRU_0724 phoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D PRU_2284 OmpH/HlpA family protein K06142 hlpA; outer membrane protein
D PRU_2285 OmpH/HlpA family protein K06142 hlpA; outer membrane protein
D PRU_0764 putative lipoprotein K06142 hlpA; outer membrane protein
D PRU_2286 conserved hypothetical protein K06142 hlpA; outer membrane protein
D PRU_0793 glycosyl hydrolase, family 25 protein K07273 acm; lysozyme
D PRU_0728 glycosyl hydrolase, family 25 protein K07273 acm; lysozyme
D PRU_0878 glycosyl hydrolase, family 25 protein K07273 acm; lysozyme
D PRU_1257 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D PRU_1986 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D PRU_2057 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D PRU_1931 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D PRU_2683 putative lipoprotein K21571 susE_F; starch-binding outer membrane protein SusE/F
D PRU_2684 conserved hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F
D PRU_2186 putative lipoprotein K21571 susE_F; starch-binding outer membrane protein SusE/F
D PRU_2714 putative lipoprotein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D PRU_1169 putative copper homeostasis protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PRU_1502 acetyltransferase, GNAT family K02348 elaA; ElaA protein
D PRU_0409 phospholipase K07001 K07001; NTE family protein
D PRU_2386 hydrolase, haloacid dehalogenase family K07025 K07025; putative hydrolase of the HAD superfamily
D PRU_1799 HAD-superfamily hydrolase, subfamily IA K07025 K07025; putative hydrolase of the HAD superfamily
D PRU_0224 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D PRU_2372 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PRU_2375 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PRU_1019 YihY family protein K07058 K07058; membrane protein
D PRU_2850 Fe-S metabolism associated family protein K02426 sufE; cysteine desulfuration protein SufE
D PRU_2467 LemA family protein K03744 lemA; LemA protein
D PRU_0141 conserved domain protein K03748 sanA; SanA protein
C 99997 Function unknown
D PRU_1116 putative arylsulfatase-activating enzyme AtsB K06871 K06871; uncharacterized protein
D PRU_0709 HD domain protein K06885 K06885; uncharacterized protein
D PRU_2580 conserved hypothetical protein K06889 K06889; uncharacterized protein
D PRU_1507 conserved hypothetical protein K06889 K06889; uncharacterized protein
D PRU_0080 conserved hypothetical protein K06889 K06889; uncharacterized protein
D PRU_0181 putative membrane protein K06890 K06890; uncharacterized protein
D PRU_1731 putative RloA K06926 K06926; uncharacterized protein
D PRU_1361 HD domain protein K06950 K06950; uncharacterized protein
D PRU_0255 HDIG domain protein K06950 K06950; uncharacterized protein
D PRU_0971 conserved hypothetical protein K07000 K07000; uncharacterized protein
D PRU_0506 putative nitroimidazole resistance protein K07005 K07005; uncharacterized protein
D PRU_0726 conserved hypothetical protein K07054 K07054; uncharacterized protein
D PRU_0576 putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D PRU_2501 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D PRU_1127 putative permease K07089 K07089; uncharacterized protein
D PRU_0172 phosphodiesterase, MJ0936 family subfamily K07095 K07095; uncharacterized protein
D PRU_2165 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D PRU_1612 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D PRU_1234 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PRU_2410 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PRU_0323 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PRU_1877 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PRU_0213 conserved hypothetical protein K07133 K07133; uncharacterized protein
D PRU_0818 conserved hypothetical protein K07137 K07137; uncharacterized protein
D PRU_0633 putative Fe-S oxidoreductase, TIGR01212 family K07139 K07139; uncharacterized protein
D PRU_2587 putative membrane protein K07148 K07148; uncharacterized protein
D PRU_0538 conserved hypothetical protein K07164 K07164; uncharacterized protein
D PRU_2298 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D PRU_1319 conserved hypothetical protein K09132 K09132; uncharacterized protein
D PRU_1880 conserved hypothetical protein K09132 K09132; uncharacterized protein
D PRU_2710 conserved hypothetical protein K09704 K09704; uncharacterized protein
D PRU_1158 conserved hypothetical protein K09704 K09704; uncharacterized protein
D PRU_0492 conserved hypothetical protein K09797 K09797; uncharacterized protein
D PRU_0053 conserved hypothetical protein K00243 K00243; uncharacterized protein
D PRU_2039 conserved hypothetical protein K09922 K09922; uncharacterized protein
D PRU_0268 conserved hypothetical protein K09955 K09955; uncharacterized protein
D PRU_0271 conserved hypothetical protein K09955 K09955; uncharacterized protein
D PRU_2607 conserved hypothetical protein K09955 K09955; uncharacterized protein
D PRU_0627 conserved hypothetical protein K09973 K09973; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024