+D GENES KO
#
KEGG Orthology (KO) - Candidatus Phytoplasma rubi
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:prub00010]
D RS022_08360 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RS022_07730 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RS022_02710 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RS022_07740 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RS022_07750 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RS022_07770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RS022_07780 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RS022_02410 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RS022_04140 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RS022_04150 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RS022_04170 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RS022_02750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00020 Citrate cycle (TCA cycle) [PATH:prub00020]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RS022_04140 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RS022_04150 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RS022_04170 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:prub00030]
D RS022_08360 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RS022_07730 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
C 00051 Fructose and mannose metabolism [PATH:prub00051]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RS022_07730 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RS022_02710 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:prub00500]
D RS022_03900 Sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D RS022_08360 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism
D RS022_08360 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:prub00620]
D RS022_04140 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RS022_04150 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RS022_04170 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RS022_04090 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RS022_08060 phosphotrans-acetylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RS022_02410 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RS022_02750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RS022_00350 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:prub00630]
D RS022_09250 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:prub00640]
D RS022_04090 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RS022_08060 phosphotrans-acetylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RS022_02750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D RS022_02710 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation
D RS022_07810 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:prub00710]
D RS022_07750 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RS022_07740 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RS022_07730 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RS022_02710 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00720 Other carbon fixation pathways [PATH:prub00720]
D RS022_08060 phosphotrans-acetylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RS022_04090 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:prub00680]
D RS022_09250 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RS022_07780 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RS022_07730 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RS022_04090 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RS022_07770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
D RS022_00630 3'-to-5' oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D RS022_07200 acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:prub00561]
D RS022_08670 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RS022_03090 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 00564 Glycerophospholipid metabolism [PATH:prub00564]
D RS022_03040 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RS022_03090 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RS022_02840 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RS022_08720 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:prub00230]
D RS022_07180 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RS022_09270 Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RS022_04070 Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RS022_08220 ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RS022_03930 2',3'-cyclic-nucleotide 2'-phosphodiesterase, Bsub YmdB K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RS022_08630 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:prub00240]
D RS022_02820 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RS022_08710 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RS022_03930 2',3'-cyclic-nucleotide 2'-phosphodiesterase, Bsub YmdB K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RS022_09270 Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RS022_04070 Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RS022_06820 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RS022_01060 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RS022_01740 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RS022_02060 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RS022_03740 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RS022_06550 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RS022_02790 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RS022_09230 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RS022_04110 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism
C 00260 Glycine, serine and threonine metabolism [PATH:prub00260]
D RS022_09250 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RS022_07770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00270 Cysteine and methionine metabolism [PATH:prub00270]
D RS022_03010 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RS022_02750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:prub00280]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis
C 00310 Lysine degradation
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:prub00430]
D RS022_08060 phosphotrans-acetylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D RS022_04090 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:prub00450]
D RS022_01190 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RS022_06790 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D RS022_09250 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism [PATH:prub00480]
D RS022_05790 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:prub00730]
D RS022_03380 Ribosome small subunit biogenesis RbfA-release protein RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RS022_08630 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism
D RS022_08240 NAD synthetase/Glutamine amidotransferase chain of NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
C 00770 Pantothenate and CoA biosynthesis
D RS022_04210 Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:prub00785]
D RS022_00570 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RS022_04140 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RS022_04150 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RS022_04170 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate [PATH:prub00670]
D RS022_09250 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RS022_04110 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RS022_07200 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D RS022_03010 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:prub03020]
D RS022_07450 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RS022_07440 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RS022_06880 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RS022_07170 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RS022_08740 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:prub03010]
D RS022_02800 SSU ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2
D RS022_07080 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D RS022_06320 SSU ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4
D RS022_06970 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D RS022_00380 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RS022_07420 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D RS022_07000 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D RS022_07570 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D RS022_07150 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D RS022_06890 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D RS022_07430 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D RS022_06900 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D RS022_07010 SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D RS022_02970 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RS022_02430 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RS022_07050 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D RS022_00400 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D RS022_07100 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D RS022_07270 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RS022_01390 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D RS022_07480 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D RS022_07110 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D RS022_07140 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D RS022_07130 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D RS022_07020 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D RS022_06990 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D RS022_07460 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D RS022_07470 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RS022_07490 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D RS022_07580 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D RS022_07040 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D RS022_06950 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D RS022_07070 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D RS022_06870 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RS022_06980 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D RS022_02450 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RS022_08500 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RS022_05540 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RS022_07090 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D RS022_07120 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D RS022_07030 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D RS022_05560 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RS022_02850 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D RS022_07060 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29
D RS022_06960 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D RS022_09240 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D RS022_01310 hypothetical protein K02911 RP-L32; large subunit ribosomal protein L32
D RS022_03060 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D RS022_07520 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RS022_08540 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RS022_08490 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RS022_06910 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:prub00970]
D RS022_07560 Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RS022_07650 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RS022_01300 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RS022_08200 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RS022_00680 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RS022_01360 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RS022_00610 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RS022_07260 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RS022_07550 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RS022_06790 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RS022_02540 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RS022_07190 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RS022_00480 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RS022_05490 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RS022_07230 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RS022_03020 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RS022_08210 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RS022_03360 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RS022_03370 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RS022_02460 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RS022_00040 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:prub03060]
D RS022_06940 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RS022_08270 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RS022_08090 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RS022_08100 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RS022_02910 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RS022_02770 S26 family signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D RS022_08230 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:prub03018]
D RS022_07780 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RS022_02630 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RS022_08790 DEAD-box ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RS022_03940 Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RS022_00720 Ribonuclease J1 (endonuclease and 5' exonuclease) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RS022_00710 Ribonuclease J2 (endoribonuclease in RNA processing) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RS022_00550 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RS022_08600 Heat shock protein 60 kDa family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:prub03030]
D RS022_05500 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RS022_08290 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RS022_08760 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RS022_00450 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RS022_00020 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RS022_00420 Replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_00110 Replicative DNA helicase-like protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_01770 Replicative DNA helicase-like protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_02020 Replicative DNA helicase protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_03700 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_04820 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_06520 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_01350 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_01780 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_06230 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_06510 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_00390 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04260 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00290 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_01580 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03320 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04650 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05010 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05200 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05240 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05860 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_06690 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_02930 Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D RS022_04200 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:prub03410]
D RS022_02920 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RS022_00740 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RS022_08910 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RS022_04200 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:prub03420]
D RS022_03550 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RS022_03560 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RS022_02720 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RS022_04200 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:prub03430]
D RS022_02720 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RS022_00390 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04260 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00290 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_01580 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03320 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04650 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05010 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05200 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05240 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05860 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_06690 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05500 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RS022_08290 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RS022_00020 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RS022_08760 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RS022_00450 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RS022_04200 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RS022_04270 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:prub03440]
D RS022_00390 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04260 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00290 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_01580 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03320 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04650 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05010 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05200 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05240 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05860 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_06690 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05500 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RS022_08290 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RS022_00020 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RS022_08760 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RS022_00450 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:prub02010]
D RS022_03430 Spermidine/putrescine import ABC transporter, extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RS022_03420 Spermidine/putrescine import ABC transporter permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D RS022_03410 Spermidine/putrescine import ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RS022_03400 Spermidine/putrescine import ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RS022_00670 carbohydrate ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RS022_02490 ABC transporter, substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D RS022_02500 ABC transporter, permease K02072 metI; D-methionine transport system permease protein
D RS022_02480 ABC transporter ATPase subunit K02071 metN; D-methionine transport system ATP-binding protein
D RS022_09010 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D RS022_08980 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RS022_06860 ATP-binding cassette domain-containing protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RS022_06850 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RS022_08590 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RS022_08580 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:prub03070]
D RS022_06940 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RS022_08270 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RS022_08100 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RS022_08090 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:prub02020]
D RS022_00010 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RS022_00350 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RS022_04910 2-hydroxycarboxylate symporter MleP K11616 maeN; malate:Na+ symporter
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:prub02024]
D RS022_06940 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RS022_08270 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RS022_08100 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RS022_08090 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D RS022_01340 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RS022_07780 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:prub01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:prub01009]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:prub01002]
D RS022_04900 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D RS022_05790 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RS022_06930 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RS022_03070 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RS022_03970 Cell division-associated, ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RS022_06440 Cell division-associated, ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RS022_07250 Cell division-associated, ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RS022_01410 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RS022_02910 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RS022_02770 S26 family signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RS022_08770 TldD/PmbA family protein K03592 pmbA; PmbA protein
D RS022_08780 TldD/PmbA family protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:prub01004]
D RS022_08670 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RS022_03090 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases
C 01007 Amino acid related enzymes [BR:prub01007]
D RS022_07650 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RS022_07560 Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RS022_02460 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RS022_00040 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RS022_07550 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RS022_07230 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RS022_06790 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RS022_00480 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RS022_02540 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RS022_07190 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RS022_05490 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RS022_08200 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RS022_00680 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RS022_08210 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RS022_01360 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RS022_07260 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RS022_03020 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RS022_00610 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RS022_01300 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RS022_03360 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RS022_03370 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:prub03000]
D RS022_00530 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
C 03021 Transcription machinery [BR:prub03021]
D RS022_06880 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RS022_07450 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RS022_07440 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RS022_08740 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D RS022_07170 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RS022_01340 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RS022_08310 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RS022_07500 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RS022_01270 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:prub03019]
D RS022_08680 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RS022_00720 Ribonuclease J1 (endonuclease and 5' exonuclease) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RS022_00710 Ribonuclease J2 (endoribonuclease in RNA processing) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RS022_03940 Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RS022_03590 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D RS022_08790 DEAD-box ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RS022_08920 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D RS022_07780 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RS022_02630 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RS022_07760 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RS022_00550 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RS022_08600 Heat shock protein 60 kDa family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
C 03041 Spliceosome
C 03011 Ribosome [BR:prub03011]
D RS022_02800 SSU ribosomal protein S2p K02967 RP-S2; small subunit ribosomal protein S2
D RS022_07080 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D RS022_06320 SSU ribosomal protein S4p K02986 RP-S4; small subunit ribosomal protein S4
D RS022_06970 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D RS022_00380 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RS022_07420 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D RS022_07000 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D RS022_07570 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D RS022_07150 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D RS022_06890 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D RS022_07430 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D RS022_06900 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D RS022_07010 SSU ribosomal protein S14p (S29e), zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D RS022_02970 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RS022_02430 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RS022_07050 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D RS022_00400 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D RS022_07100 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D RS022_07270 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RS022_01390 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D RS022_07480 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D RS022_07110 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D RS022_07140 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D RS022_07130 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D RS022_07020 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D RS022_06990 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D RS022_07470 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RS022_07490 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D RS022_07460 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D RS022_07580 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D RS022_07040 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D RS022_06950 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D RS022_07070 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D RS022_06870 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RS022_06980 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D RS022_02450 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RS022_08500 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RS022_05540 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RS022_07090 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D RS022_07120 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D RS022_07030 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D RS022_05560 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RS022_02850 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D RS022_07060 hypothetical protein K02904 RP-L29; large subunit ribosomal protein L29
D RS022_06960 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D RS022_09240 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D RS022_01310 hypothetical protein K02911 RP-L32; large subunit ribosomal protein L32
D RS022_03060 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D RS022_07520 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RS022_08540 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RS022_08490 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RS022_06910 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
C 03009 Ribosome biogenesis [BR:prub03009]
D RS022_08680 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RS022_01370 GTP-binding protein Era K03595 era; GTPase
D RS022_05570 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RS022_08310 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RS022_07500 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RS022_08040 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RS022_01240 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RS022_09180 16S rRNA (guanine(527)-N(7))-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RS022_07160 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RS022_06800 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RS022_07530 23S rRNA (guanosine(2251)-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RS022_01900 LSU rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RS022_07240 LSU rRNA pseudouridine(1911/1915/1917) synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RS022_01290 Putative pre-16S rRNA nuclease YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RS022_08790 DEAD-box ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RS022_08920 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D RS022_03380 Ribosome small subunit biogenesis RbfA-release protein RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RS022_03030 GTP-binding protein EngA K03977 engA; GTPase
D RS022_08170 LSU ribosomal maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D RS022_00440 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RS022_08220 ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RS022_08330 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RS022_01380 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RS022_00490 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:prub03016]
D RS022_03020 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RS022_00480 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RS022_07190 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RS022_06790 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RS022_07650 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RS022_07230 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RS022_05490 Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RS022_08200 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RS022_01300 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RS022_00680 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RS022_01360 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RS022_00610 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RS022_07260 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RS022_07550 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RS022_02540 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RS022_08210 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RS022_03360 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RS022_03370 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RS022_02460 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RS022_00040 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RS022_02940 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RS022_03610 tRNA pseudouridine synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RS022_00440 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RS022_00620 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RS022_09190 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RS022_08550 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RS022_07560 Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RS022_09220 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RS022_02440 tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RS022_01330 tRNA (adenine(22)-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D RS022_00360 tRNA (guanosine(18)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RS022_08230 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RS022_08190 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RS022_07670 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RS022_07660 N(6)-L-threonylcarbamoyladenine synthase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RS022_07680 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RS022_02630 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:prub03012]
D RS022_08320 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RS022_08480 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RS022_02810 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D RS022_07400 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RS022_07410 Translation elongation factor G K02355 fusA; elongation factor G
D RS022_00430 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RS022_02830 Ribosome recycling factor K02838 frr; ribosome recycling factor
D RS022_02560 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RS022_06920 hypothetical protein K02518 infA; translation initiation factor IF-1
D RS022_03910 Translation elongation factor P K02356 efp; elongation factor P
D RS022_08260 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:prub03110]
D RS022_00550 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RS022_08600 Heat shock protein 60 kDa family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RS022_00560 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RS022_06370 Hsp20 family protein K13993 HSP20; HSP20 family protein
D RS022_08610 GroES chaperonin K04078 groES; chaperonin GroES
D RS022_03970 Cell division-associated, ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RS022_06440 Cell division-associated, ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RS022_07250 Cell division-associated, ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RS022_03600 Thioredoxin family protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:prub04131]
D RS022_07740 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RS022_02410 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:prub03032]
D RS022_00280 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_00900 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_01510 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_01590 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_02150 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03310 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03860 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_04640 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_05210 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_05670 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_09080 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03050 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_00010 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RS022_00420 Replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_00110 Replicative DNA helicase-like protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_01770 Replicative DNA helicase-like protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_02020 Replicative DNA helicase protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_03700 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_04820 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_06520 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RS022_01350 DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_01780 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_06230 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_06510 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RS022_00750 DnaD domain protein K03346 dnaB; replication initiation and membrane attachment protein
D RS022_00760 IstB-like ATP binding protein, mobile unit K11144 dnaI; primosomal protein DnaI
D RS022_00390 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04260 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00290 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_01580 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03320 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04650 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05010 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05200 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05240 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05860 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_06690 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05500 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RS022_08290 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RS022_00020 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RS022_00450 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RS022_08760 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RS022_02930 Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D RS022_04200 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RS022_04270 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RS022_07690 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RS022_07700 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:prub03036]
D RS022_08680 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RS022_00280 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_00900 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_01510 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_01590 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_02150 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03310 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03860 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_04640 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_05210 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_05670 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_09080 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03050 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_00010 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RS022_09190 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RS022_09180 16S rRNA (guanine(527)-N(7))-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RS022_02780 Site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RS022_00460 Site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RS022_02530 GTP-binding protein, ribosome biogenesis, YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:prub03400]
D RS022_02920 Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RS022_02790 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RS022_00740 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RS022_08910 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RS022_04200 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RS022_03550 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RS022_03560 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RS022_02720 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RS022_07450 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RS022_07440 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RS022_06880 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RS022_08740 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D RS022_07170 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RS022_05500 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RS022_08290 DNA polymerase III polC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D RS022_00020 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RS022_00450 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RS022_08760 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RS022_00390 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04260 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00290 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_01580 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03320 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04650 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05010 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05200 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05240 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05860 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_06690 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04270 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RS022_07690 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RS022_07700 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RS022_00280 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_00900 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_01510 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_01590 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_02150 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03310 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03860 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_04640 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_05210 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_05670 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_09080 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_03050 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RS022_09270 Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RS022_04070 Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RS022_00630 3'-to-5' oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:prub03029]
D RS022_08320 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RS022_08480 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RS022_02810 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D RS022_07400 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RS022_07410 Translation elongation factor G K02355 fusA; elongation factor G
D RS022_01370 GTP-binding protein Era K03595 era; GTPase
D RS022_02460 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RS022_07190 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RS022_08200 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RS022_01360 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RS022_07230 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RS022_00390 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04260 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00290 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_01580 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03320 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_03870 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_04650 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05010 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05200 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05240 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_05860 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_06690 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RS022_00550 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RS022_08600 Heat shock protein 60 kDa family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RS022_08610 GroES chaperonin K04078 groES; chaperonin GroES
D RS022_00560 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:prub02000]
D RS022_08590 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RS022_08580 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RS022_03430 Spermidine/putrescine import ABC transporter, extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RS022_03420 Spermidine/putrescine import ABC transporter permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D RS022_03410 Spermidine/putrescine import ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D RS022_03400 Spermidine/putrescine import ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RS022_00670 carbohydrate ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RS022_00660 carbohydrate ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RS022_00650 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RS022_02490 ABC transporter, substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein
D RS022_02500 ABC transporter, permease K02072 metI; D-methionine transport system permease protein
D RS022_02480 ABC transporter ATPase subunit K02071 metN; D-methionine transport system ATP-binding protein
D RS022_09010 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D RS022_08980 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RS022_06860 ATP-binding cassette domain-containing protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RS022_06850 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RS022_08350 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D RS022_06350 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RS022_04010 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02044 Secretion system [BR:prub02044]
D RS022_08270 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RS022_06940 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RS022_08090 Signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RS022_08100 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
C 02042 Bacterial toxins [BR:prub02042]
D RS022_04010 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RS022_02950 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins
C 04147 Exosome [BR:prub04147]
D RS022_07780 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RS022_07740 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RS022_07750 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RS022_02410 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RS022_08600 Heat shock protein 60 kDa family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RS022_00550 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RS022_08360 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RS022_07400 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RS022_02940 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RS022_02750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D RS022_08630 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RS022_04180 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RS022_02710 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:prub02048]
D RS022_04270 site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RS022_01210 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RS022_02860 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RS022_06330 Diadenylate cyclase K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RS022_01260 HAD-IIIA family hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D RS022_00410 LSU ribosomal protein L9p K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D RS022_04190 putative metal-dependent hydrolase YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RS022_04000 cation-transporting P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RS022_08020 Lead, cadmium, zinc and mercury transporting P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D RS022_07540 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RS022_02470 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D RS022_03570 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RS022_02760 Spx/MgsR family RNA polymerase-binding regulatory protein K16509 spxA; regulatory protein spx
C 99974 Translation
C 99975 Protein processing
D RS022_01420 Cell division trigger factor K03545 tig; trigger factor
D RS022_07800 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D RS022_08690 Chromosome replication initiation protein DnaD K02086 dnaD; DNA replication protein
D RS022_00050 Tra5 transposase K07497 K07497; putative transposase
D RS022_01150 Tra5 transposase K07497 K07497; putative transposase
D RS022_01970 Tra5 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RS022_08750 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RS022_05530 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
C 99997 Function unknown
D RS022_08050 HD domain-containing protein K06885 K06885; uncharacterized protein
D RS022_01230 hypothetical protein K09976 K09976; uncharacterized protein
D RS022_05550 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024