+E Transcription factors KO #

  Transcription Factors - Propioniciclava coleopterorum

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D G7070_00140 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D G7070_01815 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D G7070_00800 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator D G7070_01770 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator D G7070_10200 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family C DeoR family D G7070_05725 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D G7070_00390 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_00760 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_01230 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_01325 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_01365 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_03555 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_03640 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_06345 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_06675 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_10365 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_11095 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_14130 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_15520 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G7070_08345 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family D G7070_03615 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D G7070_14005 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D G7070_06290 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D G7070_05990 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D G7070_03970 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon C Lrp/AsnC family D G7070_16055 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D G7070_14215 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family C MerR family D G7070_01715 heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D G7070_10880 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D G7070_01890 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D G7070_00320 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family D G7070_10345 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor C CRP/FNR family D G7070_17120 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D G7070_12550 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D G7070_01740 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D G7070_07695 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D G7070_00925 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family D G7070_15305 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family D G7070_06195 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D G7070_08315 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D G7070_09945 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D G7070_04565 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D G7070_10355 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D G7070_02390 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D G7070_03645 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D G7070_10820 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D G7070_17150 PTS transporter subunit EIIA K03491 licR; probable licABCH operon transcriptional regulator C Others D G7070_02330 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D G7070_05480 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D G7070_14850 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D G7070_07765 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D G7070_10020 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D G7070_07485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D G7070_04760 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D G7070_00225 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D G7070_14320 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D G7070_00525 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D G7070_13155 PspC domain-containing protein K03973 pspC; phage shock protein C D G7070_13170 PspC domain-containing protein K03973 pspC; phage shock protein C D G7070_13695 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D G7070_01335 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D G7070_16415 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D G7070_14555 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D G7070_12730 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D G7070_15370 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D G7070_12645 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0