+E Transcription factors KO
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Transcription Factors - Propioniciclava coleopterorum
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D G7070_00140 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D G7070_01815 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D G7070_00800 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D G7070_01770 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D G7070_10200 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
C LysR family
C DeoR family
D G7070_05725 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D G7070_00390 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_00760 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_01230 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_01325 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_01365 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_03555 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_03640 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_06345 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_06675 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_10365 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_11095 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_14130 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_15520 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G7070_08345 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
C GntR family
D G7070_03615 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D G7070_14005 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D G7070_06290 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
C TetR/AcrR family
D G7070_05990 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D G7070_03970 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
C Lrp/AsnC family
D G7070_16055 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D G7070_14215 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
C MerR family
D G7070_01715 heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D G7070_10880 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D G7070_01890 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D G7070_00320 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
D G7070_10345 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
C CRP/FNR family
D G7070_17120 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D G7070_12550 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
C ArsR family
D G7070_01740 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D G7070_07695 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D G7070_00925 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
D G7070_15305 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
D G7070_06195 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D G7070_08315 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D G7070_09945 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D G7070_04565 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D G7070_10355 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D G7070_02390 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D G7070_03645 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D G7070_10820 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D G7070_17150 PTS transporter subunit EIIA K03491 licR; probable licABCH operon transcriptional regulator
C Others
D G7070_02330 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D G7070_05480 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D G7070_14850 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D G7070_07765 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D G7070_10020 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D G7070_07485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D G7070_04760 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D G7070_00225 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D G7070_14320 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D G7070_00525 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D G7070_13155 PspC domain-containing protein K03973 pspC; phage shock protein C
D G7070_13170 PspC domain-containing protein K03973 pspC; phage shock protein C
D G7070_13695 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D G7070_01335 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D G7070_16415 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D G7070_14555 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D G7070_12730 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D G7070_15370 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D G7070_12645 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0