+E Transcription factors KO #

  Transcription Factors - Stutzerimonas stutzeri A1501

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D PST_2119 pobR; transcriptional regulator PobR K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D PST_2264 transcriptional regulator K07506 K07506; AraC family transcriptional regulator D PST_3621 transcriptional regulator, AraC family K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D PST_1632 putative LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PST_3921 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PST_1248 pcaQ; pca operon transcriptional activator PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D PST_2852 metR; transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D PST_0136 probable transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PST_2672 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PST_3130 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PST_2026 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D PST_4109 malonate utilization transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D PST_2165 mexT; transcriptional regulator MexT K18297 mexT; LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator D PST_0198 probable transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D PST_0185 probable transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D PST_3539 nirY; transcriptional Regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D PST_2894 trpI; transcriptional regulator TrpI K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator C DeoR family D PST_1602 glpR; glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D PST_0987 fruR; fructose transport system repressor FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D PST_2198 gntR; gluconate utilization system GNT-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D PST_3335 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D PST_0430 glcC; transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator C TetR/AcrR family D PST_1991 ttgR; transcriptional regulator TtgR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D PST_3596 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D PST_3101 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D PST_2863 probable transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D PST_1130 probable transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PST_2737 probable transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D PST_3611 probable transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon C Lrp/AsnC family D PST_0482 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PST_3716 probable transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PST_0865 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family D PST_2856 DNA-binding response regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D PST_0394 corR; DNA-binding response regulator CorR K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D PST_3483 ATP-dependent transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D PST_3171 probable transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D PST_2466 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin C MerR family D PST_3431 transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D PST_3614 probable transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D PST_1791 soxR; transcriptional regulator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D PST_1977 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D PST_1965 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D PST_3330 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PST_0043 np20; transcriptional regulator np20 K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D PST_0495 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D PST_1253 pcaR; transcriptional regulator PcaR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein C CRP/FNR family D PST_1829 anr; transcriptional regulator Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PST_3510 dnrS; transcriptional regulator DnrS K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D PST_3518 dnrD; transcription factor for denitrification gene expression elicited by NO K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D PST_0889 dnrE; DnrE protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D PST_3043 iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family D PST_2096 arsR-2; arsenic resistance transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PST_0241 arsenic resistance transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family C Other families D PST_0183 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PST_3498 hexR; transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D PST_0763 birA; BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PST_3278 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D PST_0624 putative transcriptional regulator, XRE family K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D PST_2544 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D PST_3516 norR; nitric oxide reductase regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D PST_1313 nifA; nitrogen fixation positive regulatory protein K02584 nifA; Nif-specific regulatory protein D PST_1348 putative molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein B Ribbon-helix-helix C CopG family C Other families D PST_1242 putA; proline dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D PST_3551 nosR; regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D PST_4199 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PST_1757 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH D PST_3561 phhR; transcriptional regulator PhhR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D PST_2791 glycine cleavage system transcriptional repressor, putative K03567 gcvR; glycine cleavage system transcriptional repressor D PST_0514 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D PST_3958 pyrR; pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D PST_3956 algH; alginate biosynthesis nucleoside diphosphate kinase regulator AlgH K07735 algH; putative transcriptional regulator D PST_3289 dksA; suppressor protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PST_3603 DnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor D PST_0834 predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains K07738 nrdR; transcriptional repressor NrdR D PST_1073 MarZ family protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0